BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006003
(665 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224144326|ref|XP_002325262.1| predicted protein [Populus trichocarpa]
gi|222866696|gb|EEF03827.1| predicted protein [Populus trichocarpa]
Length = 1242
Score = 1130 bits (2923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/662 (83%), Positives = 605/662 (91%), Gaps = 4/662 (0%)
Query: 4 TEETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSY 63
T T+ +LVSLFNWI KTK +++KRSKFRKF+DT+C DYFSA+RLILP+LDRERG+Y
Sbjct: 10 TAHTKFSILVSLFNWISKTKTSSRKRSKFRKFIDTFCSPSDYFSAVRLILPNLDRERGTY 69
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGA---APNAGNFPMVAAEVLQRRQGMI 120
GLKESVLA LI+ALGMS+DS DA++LINWRKGGA NAGNF +VAAEVLQRRQG +
Sbjct: 70 GLKESVLAVSLIEALGMSRDSPDALKLINWRKGGANATGANAGNFSLVAAEVLQRRQGTV 129
Query: 121 SGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
SGGLTI+ELN LLD+LASSENR EK +VL+ LI KTN QEMKWIIMIILKDLKLG+SEKS
Sbjct: 130 SGGLTIEELNGLLDKLASSENRGEKTAVLAALINKTNTQEMKWIIMIILKDLKLGMSEKS 189
Query: 181 IFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWR 240
+FHEFHPDAEDLFNVTCDLKLVCEKL+DRNQRHKRQDIEVGKAVRPQLAMR+ DAHAAW+
Sbjct: 190 VFHEFHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAMRVSDAHAAWK 249
Query: 241 KLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILD 300
KLHGKEVV+ECKFDGDRIQIHKNG+E+HYFSR+FLDHSEY H MS II QNVL +RCILD
Sbjct: 250 KLHGKEVVVECKFDGDRIQIHKNGAEVHYFSRNFLDHSEYAHGMSDIIVQNVLDERCILD 309
Query: 301 GEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERH 360
GEMLVWDTSLNRFAEFGSNQEIAKAARDGL SDRQLCY AFD+LYVGDTSVIHQ+LKERH
Sbjct: 310 GEMLVWDTSLNRFAEFGSNQEIAKAARDGLDSDRQLCYVAFDILYVGDTSVIHQTLKERH 369
Query: 361 ELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGI 420
ELL+KVVKP KGRLE LVP+ GLN+H P GEP SL+A+NVD++EKFFKETIENRDEGI
Sbjct: 370 ELLRKVVKPVKGRLEILVPNGGLNAHRLP-GEPYCSLIAYNVDDIEKFFKETIENRDEGI 428
Query: 421 VLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAER 480
VLKDLGSKWEP DRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFL+ LAER
Sbjct: 429 VLKDLGSKWEPSDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLLGLAER 488
Query: 481 PAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERP 540
PA +TYPRRFISFCRVG GLSDEELD VV+KLKPYFRK EYPK +PPSFYQVTNNSKERP
Sbjct: 489 PASNTYPRRFISFCRVGNGLSDEELDTVVSKLKPYFRKNEYPKNSPPSFYQVTNNSKERP 548
Query: 541 DVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELV 600
DVWIE+P+KSIILSITSDIRTI SEVFSAPYSLRFPRIDRVRYDKPWH+CLDVQSFVELV
Sbjct: 549 DVWIENPDKSIILSITSDIRTISSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVELV 608
Query: 601 HSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDM 660
HSSNGTTQKGK YG +QD KP +SSRKGEKK+VS+VPSH +QTD+SDIKGET IFS+M
Sbjct: 609 HSSNGTTQKGKGYGYVQDSKPTHIKSSRKGEKKSVSVVPSHLIQTDISDIKGETLIFSNM 668
Query: 661 VF 662
+F
Sbjct: 669 MF 670
>gi|225445943|ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
Length = 1162
Score = 1127 bits (2916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/660 (83%), Positives = 606/660 (91%), Gaps = 3/660 (0%)
Query: 5 EETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYG 64
EET+ VL SLF WIQ+++ +AKKRSKFR FLDT+C + FSA+RLILP+LDRERGSYG
Sbjct: 3 EETKFSVLCSLFTWIQRSRTSAKKRSKFRIFLDTFCINGHQFSAIRLILPNLDRERGSYG 62
Query: 65 LKESVLANCLIDALGMSKDSADAVRLINWRKGGA--APNAGNFPMVAAEVLQRRQGMISG 122
LKESVLA CLIDALGMS++S DA+RLINWRKGGA NAGNF MVAAEVLQRRQGM SG
Sbjct: 63 LKESVLATCLIDALGMSRESEDALRLINWRKGGAKTGANAGNFAMVAAEVLQRRQGMTSG 122
Query: 123 GLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
GLTIKELNDLLD LASSENR EK SVLSTLIKKTNAQEMKWI+MIILKDLKLGISEKSIF
Sbjct: 123 GLTIKELNDLLDCLASSENRTEKTSVLSTLIKKTNAQEMKWIVMIILKDLKLGISEKSIF 182
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
HEFHPDAEDLFNVTCDLKLVCEKLKDR+QRHKRQDIEVGKAVRPQLAMR+ DA AAW+KL
Sbjct: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRSQRHKRQDIEVGKAVRPQLAMRVADATAAWKKL 242
Query: 243 HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGE 302
HGKEVV+ECKFDGDRIQIHKNG EIH+FSR+FLDH EY +AMS I+ QN+LVDRCILDGE
Sbjct: 243 HGKEVVVECKFDGDRIQIHKNGEEIHFFSRNFLDHPEYKYAMSNIVAQNLLVDRCILDGE 302
Query: 303 MLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHEL 362
MLVWD SLNRFAEFGSNQEIAKAA++GL SDRQLCY AFD+LYVGDTSVIHQ+LKERHEL
Sbjct: 303 MLVWDISLNRFAEFGSNQEIAKAAKEGLDSDRQLCYVAFDILYVGDTSVIHQTLKERHEL 362
Query: 363 LQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVL 422
LQKVVKP KGR E LVP GLN+H RP GEPCWSL+A++VD+VE+FFK+T+ENRDEGIVL
Sbjct: 363 LQKVVKPLKGRFEILVPSGGLNTH-RPSGEPCWSLIAYDVDDVERFFKKTVENRDEGIVL 421
Query: 423 KDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPA 482
KDLGSKWEP DRSGKWLKLKPEY+ AGSDLDVLIIGGYYGSGRRGGEVAQFLV LA+
Sbjct: 422 KDLGSKWEPSDRSGKWLKLKPEYVHAGSDLDVLIIGGYYGSGRRGGEVAQFLVGLADHSG 481
Query: 483 PDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDV 542
PDTYPRRFISFCRVGTGLSD+ELDAVVTKLKPYFRK EYPK+APPSFYQVTNNSKERPD+
Sbjct: 482 PDTYPRRFISFCRVGTGLSDDELDAVVTKLKPYFRKNEYPKKAPPSFYQVTNNSKERPDI 541
Query: 543 WIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
WI+SPEKSIILSITSDIRTIRSEVF+APYSLRFPRID VRYDKPWH+CLDVQSF+ELVHS
Sbjct: 542 WIDSPEKSIILSITSDIRTIRSEVFAAPYSLRFPRIDCVRYDKPWHECLDVQSFMELVHS 601
Query: 603 SNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVF 662
SNGTTQ+G +YG +QD KPK+ +SS+KGE+K +VPSHF+QTDV+++KGET IFS+M+F
Sbjct: 602 SNGTTQRGADYGRMQDSKPKRMKSSKKGEQKTAHVVPSHFMQTDVTNVKGETLIFSNMMF 661
>gi|112732548|dbj|BAF03051.1| DNA ligase IV [Populus nigra]
Length = 1319
Score = 1127 bits (2914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/664 (82%), Positives = 606/664 (91%), Gaps = 4/664 (0%)
Query: 5 EETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYG 64
E T+ +LVSLFNWI KTK +++KRSKFRKF+DT+C DYFSA+RLILP+LDRERG+YG
Sbjct: 11 EHTKFSILVSLFNWISKTKTSSRKRSKFRKFIDTFCSPSDYFSAVRLILPNLDRERGTYG 70
Query: 65 LKESVLANCLIDALGMSKDSADAVRLINWRKGGA---APNAGNFPMVAAEVLQRRQGMIS 121
LKESVLA LI+ALGMS+DS DA++LINWRKGGA NAGNF +VAAEVLQRRQG +S
Sbjct: 71 LKESVLAVSLIEALGMSRDSPDALKLINWRKGGANATGANAGNFSLVAAEVLQRRQGTVS 130
Query: 122 GGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSI 181
GGLTI+ELN LLD+LASSENR +K +VL+ LI KTN QEMKWIIMIILKDLKLG+SEKS+
Sbjct: 131 GGLTIEELNGLLDKLASSENRGDKTAVLAALINKTNTQEMKWIIMIILKDLKLGMSEKSV 190
Query: 182 FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRK 241
FHEFHPDAEDLFNVTCDLKLVCEKL+DRNQRHKRQDIEVGKAVRPQLAMR+ DAHAAW+K
Sbjct: 191 FHEFHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAMRVSDAHAAWKK 250
Query: 242 LHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDG 301
LHGKEVV+ECKFDGDRIQIHKNG+E+HYFSR+FLDHSEY H MS II QNVL +RCILDG
Sbjct: 251 LHGKEVVVECKFDGDRIQIHKNGAEVHYFSRNFLDHSEYAHGMSDIIVQNVLDERCILDG 310
Query: 302 EMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHE 361
EMLVWDTSLNRFAEFGSNQEIAKAARDGL SDRQLCY AFD+LYVGDTSVIHQ+LKERHE
Sbjct: 311 EMLVWDTSLNRFAEFGSNQEIAKAARDGLDSDRQLCYVAFDILYVGDTSVIHQTLKERHE 370
Query: 362 LLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIV 421
LL+KVVKP KGRLE LVP+ GLN+H P GEP SL+A+NVD++EKFFKETIENRDEGIV
Sbjct: 371 LLRKVVKPVKGRLEILVPNGGLNAHRLP-GEPYCSLIAYNVDDIEKFFKETIENRDEGIV 429
Query: 422 LKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERP 481
LKDLGSKWEP DRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFL+ LAE P
Sbjct: 430 LKDLGSKWEPSDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLLGLAECP 489
Query: 482 APDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPD 541
A +TYPRRFISFCRVG GLS+EELD VV+KLKPYFRK EYPK +PPSFYQVTNNSKERPD
Sbjct: 490 ASNTYPRRFISFCRVGNGLSNEELDTVVSKLKPYFRKNEYPKNSPPSFYQVTNNSKERPD 549
Query: 542 VWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVH 601
VWIE+P+KSIILSITSDIRTI SEVFSAPYSLRFPRIDRVRYDKPWH+CLDVQSFVELVH
Sbjct: 550 VWIENPDKSIILSITSDIRTISSEVFSAPYSLRFPRIDRVRYDKPWHECLDVQSFVELVH 609
Query: 602 SSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMV 661
SSNGTTQKGK YG +QD KP +SSRKGEKK+VS+VPSH +QTD+SDIKGET IFS+M+
Sbjct: 610 SSNGTTQKGKGYGDVQDSKPTHIKSSRKGEKKSVSVVPSHLIQTDISDIKGETLIFSNMM 669
Query: 662 FCIL 665
F ++
Sbjct: 670 FYVV 673
>gi|297735473|emb|CBI17913.3| unnamed protein product [Vitis vinifera]
Length = 1163
Score = 1118 bits (2892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 548/661 (82%), Positives = 605/661 (91%), Gaps = 4/661 (0%)
Query: 5 EETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYG 64
EET+ VL SLF WIQ+++ +AKKRSKFR FLDT+C + FSA+RLILP+LDRERGSYG
Sbjct: 3 EETKFSVLCSLFTWIQRSRTSAKKRSKFRIFLDTFCINGHQFSAIRLILPNLDRERGSYG 62
Query: 65 LKESVLANCLIDALGMSKDSADAVRLINWRKGGA--APNAGNFPMVAAEVLQRRQGMISG 122
LKESVLA CLIDALGMS++S DA+RLINWRKGGA NAGNF MVAAEVLQRRQGM SG
Sbjct: 63 LKESVLATCLIDALGMSRESEDALRLINWRKGGAKTGANAGNFAMVAAEVLQRRQGMTSG 122
Query: 123 GLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
GLTIKELNDLLD LASSENR EK SVLSTLIKKTNAQEMKWI+MIILKDLKLGISEKSIF
Sbjct: 123 GLTIKELNDLLDCLASSENRTEKTSVLSTLIKKTNAQEMKWIVMIILKDLKLGISEKSIF 182
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
HEFHPDAEDLFNVTCDLKLVCEKLKDR+QRHKRQDIEVGKAVRPQLAMR+ DA AAW+KL
Sbjct: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRSQRHKRQDIEVGKAVRPQLAMRVADATAAWKKL 242
Query: 243 HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGE 302
HGKEVV+ECKFDGDRIQIHKNG EIH+FSR+FLDH EY +AMS I+ QN+LVDRCILDGE
Sbjct: 243 HGKEVVVECKFDGDRIQIHKNGEEIHFFSRNFLDHPEYKYAMSNIVAQNLLVDRCILDGE 302
Query: 303 MLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQ-LCYFAFDVLYVGDTSVIHQSLKERHE 361
MLVWD SLNRFAEFGSNQEIAKAA++GL SDRQ L Y AFD+LYVGDTSVIHQ+LKERHE
Sbjct: 303 MLVWDISLNRFAEFGSNQEIAKAAKEGLDSDRQVLSYVAFDILYVGDTSVIHQTLKERHE 362
Query: 362 LLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIV 421
LLQKVVKP KGR E LVP GLN+H RP GEPCWSL+A++VD+VE+FFK+T+ENRDEGIV
Sbjct: 363 LLQKVVKPLKGRFEILVPSGGLNTH-RPSGEPCWSLIAYDVDDVERFFKKTVENRDEGIV 421
Query: 422 LKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERP 481
LKDLGSKWEP DRSGKWLKLKPEY+ AGSDLDVLIIGGYYGSGRRGGEVAQFLV LA+
Sbjct: 422 LKDLGSKWEPSDRSGKWLKLKPEYVHAGSDLDVLIIGGYYGSGRRGGEVAQFLVGLADHS 481
Query: 482 APDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPD 541
PDTYPRRFISFCRVGTGLSD+ELDAVVTKLKPYFRK EYPK+APPSFYQVTNNSKERPD
Sbjct: 482 GPDTYPRRFISFCRVGTGLSDDELDAVVTKLKPYFRKNEYPKKAPPSFYQVTNNSKERPD 541
Query: 542 VWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVH 601
+WI+SPEKSIILSITSDIRTIRSEVF+APYSLRFPRID VRYDKPWH+CLDVQSF+ELVH
Sbjct: 542 IWIDSPEKSIILSITSDIRTIRSEVFAAPYSLRFPRIDCVRYDKPWHECLDVQSFMELVH 601
Query: 602 SSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMV 661
SSNGTTQ+G +YG +QD KPK+ +SS+KGE+K +VPSHF+QTDV+++KGET IFS+M+
Sbjct: 602 SSNGTTQRGADYGRMQDSKPKRMKSSKKGEQKTAHVVPSHFMQTDVTNVKGETLIFSNMM 661
Query: 662 F 662
F
Sbjct: 662 F 662
>gi|30696835|ref|NP_568851.2| DNA ligase 4 [Arabidopsis thaliana]
gi|75174554|sp|Q9LL84.1|DNLI4_ARATH RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|9651815|gb|AAF91284.1|AF233527_1 DNA ligase IV [Arabidopsis thaliana]
gi|332009474|gb|AED96857.1| DNA ligase 4 [Arabidopsis thaliana]
Length = 1219
Score = 1117 bits (2890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/662 (82%), Positives = 605/662 (91%), Gaps = 5/662 (0%)
Query: 4 TEETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSY 63
TEE + VLVSLFNWIQK+K +++KRSKFRKFLDTYC DYF A+RLI+PSLDRERGSY
Sbjct: 2 TEEIKFSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYCKPSDYFVAVRLIIPSLDRERGSY 61
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMI 120
GLKESVLA CLIDALG+S+D+ DAVRL+NWRKGG A NAGNF ++AAEVLQRRQGM
Sbjct: 62 GLKESVLATCLIDALGISRDAPDAVRLLNWRKGGTAKAGANAGNFSLIAAEVLQRRQGMA 121
Query: 121 SGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
SGGLTIKELNDLLDRLASSENRAEK VLSTLI+KTNAQEMKW+I IILKDLKLG+SEKS
Sbjct: 122 SGGLTIKELNDLLDRLASSENRAEKTLVLSTLIQKTNAQEMKWVIRIILKDLKLGMSEKS 181
Query: 181 IFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWR 240
IF EFHPDAEDLFNVTCDLKLVCEKL+DR+QRHKRQDIEVGKAVRPQLAMRIGD +AAW+
Sbjct: 182 IFQEFHPDAEDLFNVTCDLKLVCEKLRDRHQRHKRQDIEVGKAVRPQLAMRIGDVNAAWK 241
Query: 241 KLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILD 300
KLHGK+VV ECKFDGDRIQIHKNG++IHYFSR+FLDHSEY HAMS +I QN+LVD+CILD
Sbjct: 242 KLHGKDVVAECKFDGDRIQIHKNGTDIHYFSRNFLDHSEYAHAMSDLIVQNILVDKCILD 301
Query: 301 GEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERH 360
GEMLVWDTSLNRFAEFGSNQEIAKAAR+GL S +QLCY AFDVLYVGDTSVIHQSLKERH
Sbjct: 302 GEMLVWDTSLNRFAEFGSNQEIAKAAREGLDSHKQLCYVAFDVLYVGDTSVIHQSLKERH 361
Query: 361 ELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGI 420
ELL+KVVKP KGRLE LVP+ GLN H RP GEP WS+V H +VE+FFKET+ENRDEGI
Sbjct: 362 ELLKKVVKPLKGRLEVLVPEGGLNVH-RPSGEPSWSIVVHAAADVERFFKETVENRDEGI 420
Query: 421 VLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAER 480
VLKDL SKWEPGDRSGKW+KLKPEYIRAG+DLDVLIIGGYYGSGRRGGEVAQFLVALA+R
Sbjct: 421 VLKDLESKWEPGDRSGKWMKLKPEYIRAGADLDVLIIGGYYGSGRRGGEVAQFLVALADR 480
Query: 481 PAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERP 540
+ YPRRF+SFCRVGTGLSD+EL+ VV+KLKPYFRK E+PK+APPSFYQVTN+SKERP
Sbjct: 481 AEANVYPRRFMSFCRVGTGLSDDELNTVVSKLKPYFRKNEHPKKAPPSFYQVTNHSKERP 540
Query: 541 DVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELV 600
DVWI+SPEKSIILSITSDIRTIRSEVF APYSLRFPRID+VRYDKPWH+CLDVQ+FVELV
Sbjct: 541 DVWIDSPEKSIILSITSDIRTIRSEVFVAPYSLRFPRIDKVRYDKPWHECLDVQAFVELV 600
Query: 601 HSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDM 660
+SSNGTTQK KE QD+ PK +SS++GEKKNVS+VPS F+QTDVSDIKG+TSIFS+M
Sbjct: 601 NSSNGTTQKQKESESTQDN-PKVNKSSKRGEKKNVSLVPSQFIQTDVSDIKGKTSIFSNM 659
Query: 661 VF 662
+F
Sbjct: 660 IF 661
>gi|297796605|ref|XP_002866187.1| ATLIG4 [Arabidopsis lyrata subsp. lyrata]
gi|297312022|gb|EFH42446.1| ATLIG4 [Arabidopsis lyrata subsp. lyrata]
Length = 1221
Score = 1112 bits (2877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/664 (81%), Positives = 604/664 (90%), Gaps = 7/664 (1%)
Query: 4 TEETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSY 63
TEE + VLVSLFNWIQK+K +++KRSKFRKFLDTYC DYF A+RLI+PSLDRERGSY
Sbjct: 2 TEEIKFSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYCKPSDYFVAVRLIIPSLDRERGSY 61
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMI 120
GLKESVLA CLIDALG+S+D+ DAVRL+NWRKGG A NAGNF ++AAEVLQRRQGM
Sbjct: 62 GLKESVLATCLIDALGISRDAPDAVRLLNWRKGGTAKAGANAGNFSLIAAEVLQRRQGMA 121
Query: 121 SGGLTIKELNDLLDRLASSENR--AEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE 178
SGGLT+KELNDLLDRLASSENR AEK VLSTLI+KTNAQEMKW+I IILKDLKLG+SE
Sbjct: 122 SGGLTVKELNDLLDRLASSENRCRAEKTLVLSTLIQKTNAQEMKWVIRIILKDLKLGMSE 181
Query: 179 KSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAA 238
KSIF EFHPDAEDLFNVTCDLKLVCEKL+DR+QRHKRQDIEVGKAVRPQLAMRI D +AA
Sbjct: 182 KSIFQEFHPDAEDLFNVTCDLKLVCEKLRDRHQRHKRQDIEVGKAVRPQLAMRISDVNAA 241
Query: 239 WRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCI 298
W+KLHGK+VV ECKFDGDRIQIHKNG++IHYFSR+FLDHSEY HAMS +I QN+LVD+CI
Sbjct: 242 WKKLHGKDVVAECKFDGDRIQIHKNGTDIHYFSRNFLDHSEYAHAMSDLIVQNILVDKCI 301
Query: 299 LDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKE 358
LDGEMLVWDTSLNRFAEFGSNQEIAKAAR+GL S +QLCY AFDVLYVGDTSVIHQSLKE
Sbjct: 302 LDGEMLVWDTSLNRFAEFGSNQEIAKAAREGLDSHKQLCYVAFDVLYVGDTSVIHQSLKE 361
Query: 359 RHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDE 418
RHELL+KVVKP KGRLE LVP+ GLN H RP GEP WS+V H +VE+FFKET+ENRDE
Sbjct: 362 RHELLRKVVKPLKGRLEVLVPEGGLNVH-RPSGEPSWSIVVHAAADVERFFKETVENRDE 420
Query: 419 GIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALA 478
G+VLKDLGSKWEPGDRSGKWLKLKPEYIRAG+DLDVLIIGGYYGSGRRGGEVAQFLVALA
Sbjct: 421 GVVLKDLGSKWEPGDRSGKWLKLKPEYIRAGTDLDVLIIGGYYGSGRRGGEVAQFLVALA 480
Query: 479 ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKE 538
+R + YPRRF+SFCRVGTGLSD+EL+ VV+KLKPYFRK E+PK+APPSFYQVTN+SKE
Sbjct: 481 DRAEANVYPRRFMSFCRVGTGLSDDELNTVVSKLKPYFRKNEHPKKAPPSFYQVTNHSKE 540
Query: 539 RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVE 598
RPDVWIESPEKSIILSITSDIRTIRSEVF APYSLRFPRID+VRYDK WH+CLDVQ+FVE
Sbjct: 541 RPDVWIESPEKSIILSITSDIRTIRSEVFVAPYSLRFPRIDKVRYDKSWHECLDVQAFVE 600
Query: 599 LVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFS 658
LV+SSNGTTQK KE QD+ PK +SS+KGEKKNVS+VPS F+QTDVSDIKG+TS+FS
Sbjct: 601 LVNSSNGTTQKQKESESTQDN-PKVNKSSKKGEKKNVSLVPSQFIQTDVSDIKGKTSVFS 659
Query: 659 DMVF 662
+M+F
Sbjct: 660 NMIF 663
>gi|356556242|ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max]
Length = 1171
Score = 1112 bits (2875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/661 (81%), Positives = 605/661 (91%), Gaps = 3/661 (0%)
Query: 4 TEETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSY 63
TE+T++ VL SLF W Q++K AAKKR+KFRKFLD +C ++F A+RL+LP+LDRERGSY
Sbjct: 2 TEQTKLSVLCSLFTWTQRSKSAAKKRAKFRKFLDAFCTDHNFFPAVRLLLPNLDRERGSY 61
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAA--PNAGNFPMVAAEVLQRRQGMIS 121
GLKESVLA LIDALG+S+DS DA+RL+NWRKGGAA P AGNF +VA+EVLQRRQG S
Sbjct: 62 GLKESVLATSLIDALGISRDSPDALRLLNWRKGGAATGPTAGNFALVASEVLQRRQGTAS 121
Query: 122 GGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSI 181
GGLTI+ELN+LLDRLAS+ENRAEKI VLSTLI+KTNAQEMKWIIMIILKDLKLGISEKSI
Sbjct: 122 GGLTIRELNELLDRLASAENRAEKILVLSTLIQKTNAQEMKWIIMIILKDLKLGISEKSI 181
Query: 182 FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRK 241
FHEFHPDAEDLFNVTCDLKLVCEKL+DRNQRHKRQDIEVGKAVRPQLA R+ +A AW+K
Sbjct: 182 FHEFHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAKRVANATEAWKK 241
Query: 242 LHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDG 301
LHGK+VV+ECKFDGDRIQIHKNG+EIH+FSR+F+DHSEY HAMS+II QNVLVDRCILDG
Sbjct: 242 LHGKDVVVECKFDGDRIQIHKNGTEIHFFSRNFIDHSEYAHAMSEIIIQNVLVDRCILDG 301
Query: 302 EMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHE 361
EMLVWDTSL RFAEFGSNQEIAKAARDGL SDRQLCY AFD+LY GDTS+IHQ+LKERHE
Sbjct: 302 EMLVWDTSLKRFAEFGSNQEIAKAARDGLDSDRQLCYVAFDILYFGDTSLIHQTLKERHE 361
Query: 362 LLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIV 421
+L K+V+P KGRLE LVP+ G+NSH+ GEPCWS +AHNVDEVE+FFKETIENRDEGIV
Sbjct: 362 ILCKIVRPVKGRLEILVPNAGINSHI-SSGEPCWSFIAHNVDEVERFFKETIENRDEGIV 420
Query: 422 LKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERP 481
LKD SKWEP DRSGKWLKLKPEYI+AGSDLDVLIIGGYYGSGRRGGEVAQFLV LAERP
Sbjct: 421 LKDHSSKWEPSDRSGKWLKLKPEYIQAGSDLDVLIIGGYYGSGRRGGEVAQFLVGLAERP 480
Query: 482 APDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPD 541
+P+T+P++FISFCRVGTGLSD+ELDAVVTKLKPYFRKYEYPK+ PPSFYQVTN+SKERPD
Sbjct: 481 SPNTHPKQFISFCRVGTGLSDDELDAVVTKLKPYFRKYEYPKKRPPSFYQVTNHSKERPD 540
Query: 542 VWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVH 601
VW++SPEKSIILSITSDIRTI SEVFSAPYSLRFPRIDRVRYDK W++CLDVQSF+ELVH
Sbjct: 541 VWVDSPEKSIILSITSDIRTIESEVFSAPYSLRFPRIDRVRYDKAWYECLDVQSFIELVH 600
Query: 602 SSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMV 661
SSNGTTQ+ EYG QD KPK+ +SS +GEKKN+SIVPSH +QTDVS IKG + IFS+M+
Sbjct: 601 SSNGTTQRDTEYGSKQDSKPKRSKSSTRGEKKNLSIVPSHLIQTDVSSIKGGSLIFSNMM 660
Query: 662 F 662
F
Sbjct: 661 F 661
>gi|357449599|ref|XP_003595076.1| DNA ligase [Medicago truncatula]
gi|355484124|gb|AES65327.1| DNA ligase [Medicago truncatula]
Length = 1244
Score = 1090 bits (2818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/673 (77%), Positives = 585/673 (86%), Gaps = 14/673 (2%)
Query: 4 TEETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSY 63
TE T+ VL SLF W Q+TK AKKR+KFRKFLD +C +YF A+RLILP+LDRERGSY
Sbjct: 2 TELTKFSVLCSLFTWTQRTKAPAKKRAKFRKFLDNFCTDRNYFPAIRLILPNLDRERGSY 61
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGA--APNAGNFPMVAAEVLQRRQGMIS 121
GLKESVLA LIDALGM+KDS DA+RL+NWRKGGA NAGNF +VAAEVLQ RQG S
Sbjct: 62 GLKESVLATSLIDALGMAKDSHDALRLVNWRKGGAKTGANAGNFALVAAEVLQLRQGTAS 121
Query: 122 GGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSI 181
GGLTIKELNDLLD+L+SSENR EK VLSTLI+KTNA EMKWIIMIILKDLKLGISE+SI
Sbjct: 122 GGLTIKELNDLLDQLSSSENRGEKTLVLSTLIQKTNALEMKWIIMIILKDLKLGISERSI 181
Query: 182 FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRK 241
FHEFHPDAEDLFNVTCDLKLVCEKL+DRNQRHKRQDIEVGKAVRPQLA R+ +A AW+K
Sbjct: 182 FHEFHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAKRVANAADAWKK 241
Query: 242 LHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDG 301
LHGKEVV ECKFDGDRIQIHKNG+EIH+FSR+F+DHSEY H MS+II QN+LVDRCILDG
Sbjct: 242 LHGKEVVAECKFDGDRIQIHKNGTEIHFFSRNFIDHSEYAHGMSEIIIQNILVDRCILDG 301
Query: 302 EMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCY---------FAFDVLYVGDTSVI 352
EMLVWDTSLNRFAEFGSNQEIAKAARDGL S+RQ AFD+LY GDTSVI
Sbjct: 302 EMLVWDTSLNRFAEFGSNQEIAKAARDGLESNRQFIQDALTQKWLDVAFDILYFGDTSVI 361
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
HQ+LKERHE+L+KVVKP KGR E L+P+ G+N+H R GEPCWS +AHN +EVE+FFKET
Sbjct: 362 HQTLKERHEILRKVVKPLKGRFEILLPNGGINNH-RSSGEPCWSFIAHNAEEVERFFKET 420
Query: 413 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQ 472
IENR+EGIV+KDL SKWEP DRSGKWLKLKP+Y+ AGSDLDVLIIGGYYGSGR GGEVAQ
Sbjct: 421 IENREEGIVVKDLSSKWEPSDRSGKWLKLKPDYVHAGSDLDVLIIGGYYGSGRHGGEVAQ 480
Query: 473 FLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV 532
FLV LAERP+P+T+P+RFIS CRVGTGLSD+EL+AVVTKLKPYFRK YPK +PPSFYQV
Sbjct: 481 FLVGLAERPSPNTHPKRFISLCRVGTGLSDDELEAVVTKLKPYFRK--YPKTSPPSFYQV 538
Query: 533 TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLD 592
TN+SKERPDVW++SPEKSIILS+TSDIRTI SE F+APYSLRFPRIDRVRYDK WH+CLD
Sbjct: 539 TNHSKERPDVWVDSPEKSIILSVTSDIRTIESEAFAAPYSLRFPRIDRVRYDKDWHECLD 598
Query: 593 VQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKG 652
VQSF+ELV S NGTTQ+ EYG +D KPK+ +SS +GEKKN+S VPSH QTDVS + G
Sbjct: 599 VQSFIELVQSGNGTTQRNTEYGSNKDSKPKRMKSSTRGEKKNMSTVPSHLSQTDVSSVTG 658
Query: 653 ETSIFSDMVFCIL 665
+ +FS+M+FCIL
Sbjct: 659 GSLMFSNMMFCIL 671
>gi|449463583|ref|XP_004149513.1| PREDICTED: DNA ligase 4-like [Cucumis sativus]
Length = 1214
Score = 1059 bits (2738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/663 (79%), Positives = 585/663 (88%), Gaps = 4/663 (0%)
Query: 5 EETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYG 64
E + VL SLF+WIQ++K +AKKRSKFRKFLDT+C YFSA+RLILPSLDRERG+YG
Sbjct: 3 EPIKFAVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCSPSHYFSAIRLILPSLDRERGTYG 62
Query: 65 LKESVLANCLIDALGMSKDSADAVRLINWRKGGA--APNAGNFPMVAAEVLQRRQGMISG 122
LKESVLA CLIDALGMS+DS DA+RLINWRKGGA NAGNF +VAAEVLQRRQGM G
Sbjct: 63 LKESVLATCLIDALGMSRDSEDALRLINWRKGGAKTGANAGNFALVAAEVLQRRQGMTPG 122
Query: 123 GLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
GLTI ELNDLLDRLAS ENRAEK +VLSTLI+KTNAQEMKWI+MI L DLKLG+SEKSIF
Sbjct: 123 GLTINELNDLLDRLASGENRAEKTAVLSTLIQKTNAQEMKWIVMIFLVDLKLGVSEKSIF 182
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
HEFHPDAEDLFNVTCDLKLVCEKL+DR QRHKRQDIEVGKAVRPQLA R+ +A+AAW+KL
Sbjct: 183 HEFHPDAEDLFNVTCDLKLVCEKLRDRRQRHKRQDIEVGKAVRPQLASRVSNANAAWKKL 242
Query: 243 HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGE 302
HGKEVV ECKFDGDRIQIHKNG+E+HYFSR+FLDHSEYGH MS +I QNV RCILDGE
Sbjct: 243 HGKEVVAECKFDGDRIQIHKNGTEVHYFSRNFLDHSEYGHGMSDVIVQNVRSARCILDGE 302
Query: 303 MLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHEL 362
MLVWD SLNRFAEFGSNQEIA+AA+DG S+RQLCY AFDVLYVGDTSVIH+SLKERHEL
Sbjct: 303 MLVWDKSLNRFAEFGSNQEIARAAKDGFDSNRQLCYVAFDVLYVGDTSVIHRSLKERHEL 362
Query: 363 LQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVL 422
L+ VVKP KG+LE LVP+ GLNS G P WS+ A+NVD+VE+FFK TIENRDEGIV+
Sbjct: 363 LRDVVKPVKGQLEVLVPNDGLNSDC--AGYPSWSIRAYNVDDVERFFKSTIENRDEGIVI 420
Query: 423 KDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPA 482
KDLGSKWEPGDRSGKWLKLKP+Y+RAGSDLD LIIGGYYGSGRRGGEVAQFL+ LAERP
Sbjct: 421 KDLGSKWEPGDRSGKWLKLKPDYVRAGSDLDALIIGGYYGSGRRGGEVAQFLMGLAERPP 480
Query: 483 PDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDV 542
+ YPRRF+SFCRVGTGL+DEELDAVV KLKPYFRK EYP++ PSFYQVTNNSKERPDV
Sbjct: 481 SNAYPRRFVSFCRVGTGLTDEELDAVVNKLKPYFRKSEYPRKTAPSFYQVTNNSKERPDV 540
Query: 543 WIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
WIESPEKSIILSITSDIRTI+SEVF+APYSLRFPRIDRVRYDKPWH+CLDVQSFVELVHS
Sbjct: 541 WIESPEKSIILSITSDIRTIKSEVFAAPYSLRFPRIDRVRYDKPWHECLDVQSFVELVHS 600
Query: 603 SNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVF 662
SNGTTQ+G G QD K K +S KG KK+VS+VPSH LQTD++ I ++ IFS+M+F
Sbjct: 601 SNGTTQRGTNNSGRQDSKGKYIKSIGKGRKKSVSVVPSHLLQTDITGITEDSLIFSNMLF 660
Query: 663 CIL 665
I+
Sbjct: 661 YIV 663
>gi|255573570|ref|XP_002527709.1| DNA ligase IV, putative [Ricinus communis]
gi|223532899|gb|EEF34668.1| DNA ligase IV, putative [Ricinus communis]
Length = 850
Score = 1049 bits (2712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/659 (79%), Positives = 578/659 (87%), Gaps = 28/659 (4%)
Query: 6 ETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGL 65
ET+ V+VSLF WIQK+K +AKKRSKFRKFLDT+C DYFSA+RLILPSLDRERGSYGL
Sbjct: 5 ETKFSVMVSLFEWIQKSKYSAKKRSKFRKFLDTFCKPDDYFSAIRLILPSLDRERGSYGL 64
Query: 66 KESVLANCLIDALGMSKDSADAVRLINWRKGG--AAPNAGNFPMVAAEVLQRRQGMISGG 123
KESVLA CL+DAL MS+DS DAVRL NWRKGG NAG+FP+VA EVLQRRQG SGG
Sbjct: 65 KESVLATCLVDALAMSRDSPDAVRLFNWRKGGPKTGSNAGHFPLVAFEVLQRRQGTSSGG 124
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
L+IKELNDLLD+LASSENR EKISVLSTLIKKTNAQEMKW+IMIILKDLKLGISEKSIF+
Sbjct: 125 LSIKELNDLLDKLASSENRGEKISVLSTLIKKTNAQEMKWLIMIILKDLKLGISEKSIFN 184
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLH 243
EFHPDAEDLFNVTCDLKLVCEKLKD++QRHKRQDIEVGKAVRPQLAMR+ DAH+AW+KLH
Sbjct: 185 EFHPDAEDLFNVTCDLKLVCEKLKDQSQRHKRQDIEVGKAVRPQLAMRVSDAHSAWKKLH 244
Query: 244 GKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEM 303
GKEVV+ECKFDGDRIQIHKNG+EIHYFSR+FLDHSEYGH MS+II QNVL D+CILDGEM
Sbjct: 245 GKEVVVECKFDGDRIQIHKNGAEIHYFSRNFLDHSEYGHGMSEIIIQNVLADKCILDGEM 304
Query: 304 LVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELL 363
LVWD+SLNRFAEFGSNQEI DTSVIHQSL+ERH+LL
Sbjct: 305 LVWDSSLNRFAEFGSNQEI-------------------------DTSVIHQSLRERHDLL 339
Query: 364 QKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLK 423
+K V+P KGRLE LVPD GLN H P GEP SL+ +NV++V++FF+ET++NRDEGI+LK
Sbjct: 340 RKFVRPVKGRLEILVPDGGLNDHRLP-GEPPCSLITYNVNDVKRFFEETVKNRDEGIILK 398
Query: 424 DLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAP 483
DL SKWEP DRSGKWLKLKPEYI+A SDLDVLIIGGYYGSGRRGGEVAQFLV LAERPAP
Sbjct: 399 DLASKWEPSDRSGKWLKLKPEYIQAASDLDVLIIGGYYGSGRRGGEVAQFLVGLAERPAP 458
Query: 484 DTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVW 543
DTYPRRFISFCRVGTGL+D+EL AVV KLKPYFRKYEYPK APP+FYQVTNNSKERPDVW
Sbjct: 459 DTYPRRFISFCRVGTGLTDDELAAVVNKLKPYFRKYEYPKMAPPNFYQVTNNSKERPDVW 518
Query: 544 IESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSS 603
IESPEKSIILSITSDIRTI SEVF+APYSLRFPRIDRVRYDKPWH+CLDVQSFVELVHSS
Sbjct: 519 IESPEKSIILSITSDIRTISSEVFAAPYSLRFPRIDRVRYDKPWHECLDVQSFVELVHSS 578
Query: 604 NGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVF 662
NGTTQ GK+ GLQD+KP +SS+KG +KN S VPSHF++TDVS +K E+ IFS M+F
Sbjct: 579 NGTTQNGKDNKGLQDNKPTSVKSSKKGGRKNASAVPSHFIETDVSGVKEESFIFSKMMF 637
>gi|8843818|dbj|BAA97366.1| unnamed protein product [Arabidopsis thaliana]
Length = 1184
Score = 1041 bits (2693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/651 (79%), Positives = 573/651 (88%), Gaps = 27/651 (4%)
Query: 4 TEETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSY 63
TEE + VLVSLFNWIQK+K +++KRSKFRKFLDTYC DYF A+RLI+PSLDRERGSY
Sbjct: 2 TEEIKFSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYCKPSDYFVAVRLIIPSLDRERGSY 61
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMI 120
GLKESVLA CLIDALG+S+D+ DAVRL+NWRKGG A NAGNF ++AAEVLQRRQGM
Sbjct: 62 GLKESVLATCLIDALGISRDAPDAVRLLNWRKGGTAKAGANAGNFSLIAAEVLQRRQGMA 121
Query: 121 SGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
SGGLTIKELNDLLDRLASSENRAEK VLSTLI+KTNAQEMKW+I IILKDLKLG+SEKS
Sbjct: 122 SGGLTIKELNDLLDRLASSENRAEKTLVLSTLIQKTNAQEMKWVIRIILKDLKLGMSEKS 181
Query: 181 IFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWR 240
IF EFHPDAEDLFNVTCDLKLVCEKL+DR+QRHKRQDIEVGKAVRPQLAMRIGD +AAW+
Sbjct: 182 IFQEFHPDAEDLFNVTCDLKLVCEKLRDRHQRHKRQDIEVGKAVRPQLAMRIGDVNAAWK 241
Query: 241 KLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILD 300
KLHGK+VV ECKFDGDRIQIHKNG++IHYFSR+FLDHSEY HAMS +I QN+LVD+CILD
Sbjct: 242 KLHGKDVVAECKFDGDRIQIHKNGTDIHYFSRNFLDHSEYAHAMSDLIVQNILVDKCILD 301
Query: 301 GEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERH 360
GEMLVWDTSLNRFAEFGSNQEIAKAAR+GL S +Q ERH
Sbjct: 302 GEMLVWDTSLNRFAEFGSNQEIAKAAREGLDSHKQ----------------------ERH 339
Query: 361 ELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGI 420
ELL+KVVKP KGRLE LVP+ GLN H RP GEP WS+V H +VE+FFKET+ENRDEGI
Sbjct: 340 ELLKKVVKPLKGRLEVLVPEGGLNVH-RPSGEPSWSIVVHAAADVERFFKETVENRDEGI 398
Query: 421 VLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAER 480
VLKDL SKWEPGDRSGKW+KLKPEYIRAG+DLDVLIIGGYYGSGRRGGEVAQFLVALA+R
Sbjct: 399 VLKDLESKWEPGDRSGKWMKLKPEYIRAGADLDVLIIGGYYGSGRRGGEVAQFLVALADR 458
Query: 481 PAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERP 540
+ YPRRF+SFCRVGTGLSD+EL+ VV+KLKPYFRK E+PK+APPSFYQVTN+SKERP
Sbjct: 459 AEANVYPRRFMSFCRVGTGLSDDELNTVVSKLKPYFRKNEHPKKAPPSFYQVTNHSKERP 518
Query: 541 DVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELV 600
DVWI+SPEKSIILSITSDIRTIRSEVF APYSLRFPRID+VRYDKPWH+CLDVQ+FVELV
Sbjct: 519 DVWIDSPEKSIILSITSDIRTIRSEVFVAPYSLRFPRIDKVRYDKPWHECLDVQAFVELV 578
Query: 601 HSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIK 651
+SSNGTTQK KE QD+ PK +SS++GEKKNVS+VPS F+QTDVSDIK
Sbjct: 579 NSSNGTTQKQKESESTQDN-PKVNKSSKRGEKKNVSLVPSQFIQTDVSDIK 628
>gi|222629503|gb|EEE61635.1| hypothetical protein OsJ_16077 [Oryza sativa Japonica Group]
Length = 1322
Score = 975 bits (2520), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/682 (71%), Positives = 577/682 (84%), Gaps = 32/682 (4%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV---DYFSALRLILPSLDRERGSYGLKE 67
+LV++F + + + AAKKR++ R LD DYFSALRL+LP LDRERGSYGLKE
Sbjct: 9 LLVAMFQAMSRDRTAAKKRARLRALLDRAYGPGGRDDYFSALRLVLPGLDRERGSYGLKE 68
Query: 68 SVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIK 127
+ LA+ L+DALG++KDS DAVRL NWR+GG NAGNF +VAAEVLQRRQGM SGGLTIK
Sbjct: 69 AALASVLVDALGIAKDSPDAVRLTNWRRGGGFRNAGNFALVAAEVLQRRQGMTSGGLTIK 128
Query: 128 ELNDLLDRLASSEN--------------RAEKISVLSTLIKKTNAQEMKWIIMIILKDLK 173
E+ND LDRLA++EN R+EK S+LS+LIKKTNA EMKW++MIILKDLK
Sbjct: 129 EVNDALDRLAATENSVCLESEKLLLILDRSEKASILSSLIKKTNALEMKWLLMIILKDLK 188
Query: 174 LGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIG 233
LGISEKS+FHEFHPDAEDLFNVTCDL+LVCEKL DR+QRHKRQDIEVGKAVRPQL+MR+
Sbjct: 189 LGISEKSVFHEFHPDAEDLFNVTCDLRLVCEKLNDRSQRHKRQDIEVGKAVRPQLSMRVN 248
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVL 293
+A +AW+KLHGK+VV ECKFDGDRIQIHKNG EIH+FSRSFLDHSEY MSK+I +N+L
Sbjct: 249 NASSAWKKLHGKQVVAECKFDGDRIQIHKNGEEIHFFSRSFLDHSEYAPGMSKVIIENIL 308
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL----------CYF--AF 341
VDRCILDGEMLVWDT LNRFAEFGSNQEIAKAA++GL +DRQ+ +F AF
Sbjct: 309 VDRCILDGEMLVWDTVLNRFAEFGSNQEIAKAAKEGLETDRQVFVMNFYLLHALFFNVAF 368
Query: 342 DVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHN 401
D+LY GDTSVIHQSL ERHE+LQKVV+P KG LE LVP GLN H RP EPCWS++AH+
Sbjct: 369 DILYAGDTSVIHQSLTERHEILQKVVRPLKGHLEILVPTGGLNIH-RPPDEPCWSILAHS 427
Query: 402 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYY 461
+D+VEKFFK+T++NR+EGI+LKDL SKWEPGDRSGKWLKLKP+YI AG+DLDV+IIGGYY
Sbjct: 428 LDDVEKFFKDTVDNREEGIILKDLESKWEPGDRSGKWLKLKPDYIHAGADLDVIIIGGYY 487
Query: 462 GSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 521
GSGRRGGEVAQFLV LA ++YP+RF+SFCRVGTGLSDEELDA+VTKLKP+FRK EY
Sbjct: 488 GSGRRGGEVAQFLVGLAVPSDDNSYPKRFLSFCRVGTGLSDEELDALVTKLKPHFRKNEY 547
Query: 522 PKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 581
PK+ PP FY+VTN+SKERPDVWIESP+KS+I+SITSDIRTI+SEVF+APYSLRFPRI R+
Sbjct: 548 PKK-PPRFYEVTNHSKERPDVWIESPDKSVIISITSDIRTIKSEVFAAPYSLRFPRIQRL 606
Query: 582 RYDKPWHDCLDVQSFVELVHSSNGTTQKGK-EYGGLQDDKPKQFRSSRKGEKKNVSIVPS 640
RYDKPWH+CLDVQ+FV++VHSSNGTT + + L++ K KQ R+++KGEKKNVSI+PS
Sbjct: 607 RYDKPWHECLDVQAFVDIVHSSNGTTHRAADDDNDLKNVKVKQPRTNKKGEKKNVSIIPS 666
Query: 641 HFLQTDVSDIKGETSIFSDMVF 662
H ++TD+S +KGET IF++ +F
Sbjct: 667 HLMKTDISGLKGETLIFANTMF 688
>gi|218195520|gb|EEC77947.1| hypothetical protein OsI_17298 [Oryza sativa Indica Group]
Length = 1322
Score = 974 bits (2518), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/682 (70%), Positives = 576/682 (84%), Gaps = 32/682 (4%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV---DYFSALRLILPSLDRERGSYGLKE 67
+LV++F + + + A KKR++ R LD DYFSALRL+LP LDRERGSYGLKE
Sbjct: 9 LLVAMFQAMSRDRTAEKKRARLRALLDRAYGPGGRDDYFSALRLVLPGLDRERGSYGLKE 68
Query: 68 SVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIK 127
+ LA+ L+DALG++KDS DAVRL NWR+GG NAGNF +VAAEVLQRRQGM SGGLTIK
Sbjct: 69 AALASVLVDALGIAKDSPDAVRLTNWRRGGGFRNAGNFALVAAEVLQRRQGMTSGGLTIK 128
Query: 128 ELNDLLDRLASSEN--------------RAEKISVLSTLIKKTNAQEMKWIIMIILKDLK 173
E+ND LDRLA++EN R+EK S+LS+LIKKTNA EMKW++MIILKDLK
Sbjct: 129 EVNDALDRLAATENSVCLESEKLLLILDRSEKASILSSLIKKTNALEMKWLLMIILKDLK 188
Query: 174 LGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIG 233
LGISEKS+FHEFHPDAEDLFNVTCDL+LVCEKL DR+QRHKRQDIEVGKAVRPQLAMR+
Sbjct: 189 LGISEKSVFHEFHPDAEDLFNVTCDLRLVCEKLNDRSQRHKRQDIEVGKAVRPQLAMRVN 248
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVL 293
+A +AW+KLHGK+VV ECKFDGDRIQIHKNG EIH+FSRSFLDHSEY MSK+I +N+L
Sbjct: 249 NASSAWKKLHGKQVVAECKFDGDRIQIHKNGEEIHFFSRSFLDHSEYAPGMSKVIIENIL 308
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL----------CYF--AF 341
VDRCILDGEMLVWDT LNRFAEFGSNQEIAKAA++GL +DRQ+ +F AF
Sbjct: 309 VDRCILDGEMLVWDTVLNRFAEFGSNQEIAKAAKEGLETDRQVFVMNFYLLHALFFNVAF 368
Query: 342 DVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHN 401
D+LY GDTSVIHQSL ERHE+L+KVV+P KG LE LVP GLN H RP EPCWS++AH+
Sbjct: 369 DILYAGDTSVIHQSLTERHEILRKVVRPLKGHLEILVPTGGLNIH-RPPDEPCWSILAHS 427
Query: 402 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYY 461
+D+VEKFFK+T++NR+EGI+LKDL SKWEPGDRSGKWLKLKP+YI AG+DLDV+IIGGYY
Sbjct: 428 LDDVEKFFKDTVDNREEGIILKDLESKWEPGDRSGKWLKLKPDYIHAGADLDVIIIGGYY 487
Query: 462 GSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 521
GSGRRGGEVAQFLV LA ++YP+RF+SFCRVGTGLSDEELDA+VTKLKP+FRK EY
Sbjct: 488 GSGRRGGEVAQFLVGLAVPSDDNSYPKRFLSFCRVGTGLSDEELDALVTKLKPHFRKNEY 547
Query: 522 PKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 581
PK+ PP FY+VTN+SKERPDVWIESP+KS+I+SITSDIRTI+SEVF+APYSLRFPRI R+
Sbjct: 548 PKK-PPRFYEVTNHSKERPDVWIESPDKSVIISITSDIRTIKSEVFAAPYSLRFPRIQRL 606
Query: 582 RYDKPWHDCLDVQSFVELVHSSNGTTQKGK-EYGGLQDDKPKQFRSSRKGEKKNVSIVPS 640
RYDKPWH+CLDVQ+FV++VHSSNGTT + + L++ K KQ R+++KGEKKNVSI+PS
Sbjct: 607 RYDKPWHECLDVQAFVDIVHSSNGTTHRAADDDNDLKNVKVKQLRTNKKGEKKNVSIIPS 666
Query: 641 HFLQTDVSDIKGETSIFSDMVF 662
H ++TD+S +KGET IF++ +F
Sbjct: 667 HLMKTDISGLKGETLIFANTMF 688
>gi|116309733|emb|CAH66777.1| OSIGBa0113I13.3 [Oryza sativa Indica Group]
Length = 1281
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/656 (72%), Positives = 561/656 (85%), Gaps = 21/656 (3%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV---DYFSALRLILPSLDRERGSYGLKE 67
+LV++F + + + A KKR++ R LD DYFSALRL+LP LDRERGSYGLKE
Sbjct: 9 LLVAMFQAMSRDRTAEKKRARLRALLDRAYGPGGRDDYFSALRLVLPGLDRERGSYGLKE 68
Query: 68 SVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIK 127
+ LA+ L+DALG++KDS DAVRL NWR+GG NAGNF +VAAEVLQRRQGM SGGLTIK
Sbjct: 69 AALASVLVDALGIAKDSPDAVRLTNWRRGGGFRNAGNFALVAAEVLQRRQGMTSGGLTIK 128
Query: 128 ELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHP 187
E+ND LDRLA++ENR+EK S+LS+LIKKTNA EMKW++MIILKDLKLGISEKS+FHEFHP
Sbjct: 129 EVNDALDRLAATENRSEKASILSSLIKKTNALEMKWLLMIILKDLKLGISEKSVFHEFHP 188
Query: 188 DAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEV 247
DAEDLFNVTCDL+LVCEKL DR+QRHKRQDIEVGKAVRPQLAMR+ +A +AW+KLHGK+V
Sbjct: 189 DAEDLFNVTCDLRLVCEKLNDRSQRHKRQDIEVGKAVRPQLAMRVNNASSAWKKLHGKQV 248
Query: 248 VIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWD 307
V ECKFDGDRIQIHKNG EIH+FSRSFLDHSEY MSK+I +N+LVDRCILDGEMLVWD
Sbjct: 249 VAECKFDGDRIQIHKNGEEIHFFSRSFLDHSEYAPGMSKVIIENILVDRCILDGEMLVWD 308
Query: 308 TSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVV 367
T LNRFAEFGSNQEI AFD+LY GDTSVIHQSL ERHE+L+KVV
Sbjct: 309 TVLNRFAEFGSNQEID---------------VAFDILYAGDTSVIHQSLTERHEILRKVV 353
Query: 368 KPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGS 427
+P KG LE LVP GLN H RP EPCWS++AH++D+VEKFFK+T++NR+EGI+LKDL S
Sbjct: 354 RPLKGHLEILVPTGGLNIH-RPPDEPCWSILAHSLDDVEKFFKDTVDNREEGIILKDLES 412
Query: 428 KWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYP 487
KWEPGDRSGKWLKLKP+YI AG+DLDV+IIGGYYGSGRRGGEVAQFLV LA ++YP
Sbjct: 413 KWEPGDRSGKWLKLKPDYIHAGADLDVIIIGGYYGSGRRGGEVAQFLVGLAVPSDDNSYP 472
Query: 488 RRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESP 547
+RF+SFCRVGTGLSDEELDA+VTKLKP+FRK EYPK+ PP FY+VTN+SKERPDVWIESP
Sbjct: 473 KRFLSFCRVGTGLSDEELDALVTKLKPHFRKNEYPKK-PPRFYEVTNHSKERPDVWIESP 531
Query: 548 EKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTT 607
+KS+I+SITSDIRTI+SEVF+APYSLRFPRI R+RYDKPWH+CLDVQ+FV++VHSSNGTT
Sbjct: 532 DKSVIISITSDIRTIKSEVFAAPYSLRFPRIQRLRYDKPWHECLDVQAFVDIVHSSNGTT 591
Query: 608 QKGK-EYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVF 662
+ + L++ K KQ R+++KGEKKNVSI+PSH ++TD+S +KGET IF++ +F
Sbjct: 592 HRAADDDNDLKNVKVKQLRTNKKGEKKNVSIIPSHLMKTDISGLKGETLIFANTMF 647
>gi|242077098|ref|XP_002448485.1| hypothetical protein SORBIDRAFT_06g027820 [Sorghum bicolor]
gi|241939668|gb|EES12813.1| hypothetical protein SORBIDRAFT_06g027820 [Sorghum bicolor]
Length = 1164
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/644 (71%), Positives = 537/644 (83%), Gaps = 32/644 (4%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLD-TYCDSV---DYFSALRLILPSLDRERGSYGLK 66
+LV++F + K +AKKRS+ R FLD Y S DYFSALRL+LP LDRERG+YGLK
Sbjct: 9 LLVAMFQAMSGDKSSAKKRSRLRAFLDRAYVPSGGRDDYFSALRLVLPGLDRERGTYGLK 68
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTI 126
E+ LA L+DALG++KDSADAVRL NWR+GG NAGNF +VAAEVLQRRQG+ SGGLTI
Sbjct: 69 EATLAAVLVDALGIAKDSADAVRLTNWRRGGGFRNAGNFGLVAAEVLQRRQGLTSGGLTI 128
Query: 127 KELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFH 186
KE+ND LDRLA++ENR+EK S+LS LIKKTNA EMKW++MIILKDLKLGISEKSIF EFH
Sbjct: 129 KEVNDALDRLAATENRSEKASILSNLIKKTNAAEMKWLLMIILKDLKLGISEKSIFEEFH 188
Query: 187 PDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKE 246
PDA+DLFNVTCDLK VCEKL DR+QRHKRQDIE+GKAVRPQLAMR+ DA AAW+KLHGK+
Sbjct: 189 PDAQDLFNVTCDLKFVCEKLNDRSQRHKRQDIEIGKAVRPQLAMRVRDASAAWKKLHGKQ 248
Query: 247 VVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVW 306
VV ECKFDGDRIQIHKNG EIH+FS RCILDGEMLVW
Sbjct: 249 VVAECKFDGDRIQIHKNGEEIHFFS------------------------RCILDGEMLVW 284
Query: 307 DTSLNRFAEFGSNQEIAKAARDGLSSDRQLCY-FAFDVLYVGDTSVIHQSLKERHELLQK 365
DT LNRFAEFGSNQEIAKAAR+GL +DRQ C AFD+LY GDTSVIHQSL ERH++LQK
Sbjct: 285 DTVLNRFAEFGSNQEIAKAAREGLETDRQRCIDVAFDILYAGDTSVIHQSLTERHQILQK 344
Query: 366 VVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL 425
VVKP KG LE L+P GLN RP EPCWS++AHNV++VE+FFKETIENRDEGI+LKDL
Sbjct: 345 VVKPLKGHLEILIPTGGLNVR-RPSDEPCWSIIAHNVEDVERFFKETIENRDEGIILKDL 403
Query: 426 GSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDT 485
SKWEPGDR+GKWLKLKP+YI AG+DLDV+IIGGYYGSGRRG EVAQFLV LA ++
Sbjct: 404 DSKWEPGDRNGKWLKLKPDYIHAGADLDVIIIGGYYGSGRRGREVAQFLVGLAVPSDDNS 463
Query: 486 YPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE 545
YP+RF+SFCRVGTGLSDEE DA+VTKLKPYFRK EYPK+ PP FY+VTNNSKERPDVWIE
Sbjct: 464 YPKRFLSFCRVGTGLSDEERDALVTKLKPYFRKNEYPKK-PPKFYEVTNNSKERPDVWIE 522
Query: 546 SPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNG 605
SP+KS+I+S+TSDIRTI+SEVF++PY LRFPRI RVRYDKPWH+CLDVQ+FV++VHSSNG
Sbjct: 523 SPDKSVIISVTSDIRTIKSEVFASPYCLRFPRIQRVRYDKPWHECLDVQAFVDIVHSSNG 582
Query: 606 TTQKGKEYGGLQDDKPKQFRSSRKGEKKN-VSIVPSHFLQTDVS 648
TTQ+ + L++D + R+++K EKK VS++PSH ++TDVS
Sbjct: 583 TTQRVADDNSLKNDDTNRSRTNKKVEKKKCVSVIPSHLMKTDVS 626
>gi|75140457|sp|Q7X7E9.2|DNLI4_ORYSJ RecName: Full=Putative DNA ligase 4; AltName: Full=DNA ligase IV;
AltName: Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|38346547|emb|CAD41778.2| OSJNBa0035M09.8 [Oryza sativa Japonica Group]
Length = 1322
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/701 (65%), Positives = 537/701 (76%), Gaps = 101/701 (14%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV---DYFSALRLILPSLDRERGSYGLKE 67
+LV++F + + + AAKKR++ R LD DYFSALRL+LP LDRERGSYGLKE
Sbjct: 9 LLVAMFQAMSRDRTAAKKRARLRALLDRAYGPGGRDDYFSALRLVLPGLDRERGSYGLKE 68
Query: 68 SVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIK 127
+ LA+ L+DALG++KDS DAVRL NWR+GG NAGNF +VAAEVLQRRQGM SGGLTIK
Sbjct: 69 AALASVLVDALGIAKDSPDAVRLTNWRRGGGFRNAGNFALVAAEVLQRRQGMTSGGLTIK 128
Query: 128 ELNDLLDRLASSEN--------------RAEKISVLSTLIKKTNAQEMKWIIMIILKDLK 173
E+ND LDRLA++EN R+EK S+LS+LIKKTNA EMKW++MIILKDLK
Sbjct: 129 EVNDALDRLAATENSVCLESEKLLLILDRSEKASILSSLIKKTNALEMKWLLMIILKDLK 188
Query: 174 LGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIG 233
LGISEKS+FHEFHPDAEDLFNVTCDL+LVCEKL DR+QRHKRQDIEVGKAVRPQL+MR+
Sbjct: 189 LGISEKSVFHEFHPDAEDLFNVTCDLRLVCEKLNDRSQRHKRQDIEVGKAVRPQLSMRVN 248
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVL 293
+A +AW+KLHGK+VV ECKFDGDRIQIHKNG EIH+FSRSFLDHSEY MSK+I +N+L
Sbjct: 249 NASSAWKKLHGKQVVAECKFDGDRIQIHKNGEEIHFFSRSFLDHSEYAPGMSKVIIENIL 308
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLC---------------- 337
VDRCILDGEMLVWDT LNRFAEFGSNQEIAKAA++GL +DRQLC
Sbjct: 309 VDRCILDGEMLVWDTVLNRFAEFGSNQEIAKAAKEGLETDRQLCCILEWIASYVLALCVN 368
Query: 338 ---------------YFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
Y AFD+LY GDTSVIHQSL ERHE+LQKVV+P KG LE LVP G
Sbjct: 369 ILSCQDFFFSNKRESYVAFDILYAGDTSVIHQSLTERHEILQKVVRPLKGHLEILVPTGG 428
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN--------------------------- 415
LN H RP EPCWS++AH++D+VEKFFK+T++N
Sbjct: 429 LNIH-RPPDEPCWSILAHSLDDVEKFFKDTVDNRFFPTSPNTDELSNLSISLMIQFRFSD 487
Query: 416 -------RDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGG 468
R+EGI+LKDL SKWEPGDRSGKWLKLKP+YI AG+DLDV+IIGGYYGSGRRGG
Sbjct: 488 YSICYVLREEGIILKDLESKWEPGDRSGKWLKLKPDYIHAGADLDVIIIGGYYGSGRRGG 547
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
EVAQFLV LA ++YP+RF+SFCRVGTGLSDEELDA+VTKLKP+FRK EYPK+ PP
Sbjct: 548 EVAQFLVGLAVPSDDNSYPKRFLSFCRVGTGLSDEELDALVTKLKPHFRKNEYPKK-PPR 606
Query: 529 FYQVTNNSKERPDVWIESPEK-----------------SIILSITSDIRTIRSEVFSAPY 571
FY+VTN+SKERPDVWIESP+K S+I+SITSDIRTI+SEVF+APY
Sbjct: 607 FYEVTNHSKERPDVWIESPDKQSVRFRKHLIYCITKCRSVIISITSDIRTIKSEVFAAPY 666
Query: 572 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKE 612
SLRFPRI R+RYDKPWH+CLDVQ+FV++VHSSNGTT + +
Sbjct: 667 SLRFPRIQRLRYDKPWHECLDVQAFVDIVHSSNGTTHRAAD 707
>gi|357168383|ref|XP_003581620.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA ligase 4-like
[Brachypodium distachyon]
Length = 1249
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/698 (66%), Positives = 534/698 (76%), Gaps = 91/698 (13%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV---DYFSALRLILPSLDRERGSYGLKE 67
+LV++F + + + +AKKR + R FLD + DYFSALRL+LPSLDRERGSYGLKE
Sbjct: 9 LLVAMFQAMSRDRTSAKKRGRLRAFLDRAYGAPGRDDYFSALRLVLPSLDRERGSYGLKE 68
Query: 68 SVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGN--FPMVAAEVLQRRQGMISGGLT 125
+ LA L+DALG++KDS DAVRL NWR+GG F +VAAEVLQRRQGM SGGLT
Sbjct: 69 AALAAALVDALGIAKDSPDAVRLTNWRRGGGGSGRNAGNFSLVAAEVLQRRQGMTSGGLT 128
Query: 126 IKELNDLLDRLASSENR-------------------------AEKISVLSTLIKKTNAQE 160
IKE+ND LD L+++ENR +EK VLS+LIKKTNA E
Sbjct: 129 IKEVNDALDHLSATENRXLIFRLHSCIXLKSQNQKFFLILDRSEKALVLSSLIKKTNALE 188
Query: 161 MKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEV 220
MKW++MIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKL DR+QRHKRQDIEV
Sbjct: 189 MKWLLMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLNDRSQRHKRQDIEV 248
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEY 280
GKAVRPQLAMR+ +A +AW+KLHGK VV ECKFDGDRIQIHKNG EIH+FSR+FLDHSEY
Sbjct: 249 GKAVRPQLAMRVSNASSAWKKLHGKPVVAECKFDGDRIQIHKNGEEIHFFSRTFLDHSEY 308
Query: 281 GHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFA 340
MS+ I++N+LVDRCILDGEMLVWDT+LNRFAEFGSNQEIAKAARDGL +DRQLCY A
Sbjct: 309 EPGMSRYIKENILVDRCILDGEMLVWDTALNRFAEFGSNQEIAKAARDGLETDRQLCYVA 368
Query: 341 FDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAH 400
FD+LY GDTSVIHQSL ERHE+L+KVVKP KG LE LVP GLN H RP EPCWS+ AH
Sbjct: 369 FDILYAGDTSVIHQSLTERHEILRKVVKPLKGHLEILVPTGGLNVH-RPSDEPCWSIFAH 427
Query: 401 NVDEVEKFFKETIEN----------------------------RDEGIVLKDLGSKWEPG 432
N+++ EKFFKET++N R+EGIVLKDL SKWEPG
Sbjct: 428 NIEDAEKFFKETVDNRFLSTSNFLXQXXFNFPLLXSFNPSSVLREEGIVLKDLDSKWEPG 487
Query: 433 DRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFIS 492
DRSGKWLKLKP+YI AG+DLDV+I+GGYYGSGRRGGEVAQFLV LA ++YP+RF+S
Sbjct: 488 DRSGKWLKLKPDYIHAGTDLDVIIVGGYYGSGRRGGEVAQFLVGLAVPSNDNSYPKRFLS 547
Query: 493 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEK--- 549
FCRVGTGLSDEELDA+VTKLKP+FRK EYPK+ PP FY+VTNNSKERPDVWIESP+K
Sbjct: 548 FCRVGTGLSDEELDALVTKLKPHFRKNEYPKK-PPRFYEVTNNSKERPDVWIESPDKXAL 606
Query: 550 ----------------------------SIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 581
S+I+S+TSDIRTI+SEVF+APY LRFPRI +V
Sbjct: 607 FHALVSCLFAGQSLRWRKNLIRXVTNCRSVIISVTSDIRTIKSEVFAAPYCLRFPRIQQV 666
Query: 582 RYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
RYDKPWH+CLDVQSFVE+VHSSNGT QK ++ L++D
Sbjct: 667 RYDKPWHECLDVQSFVEIVHSSNGTMQKAEDDKSLKND 704
>gi|302803492|ref|XP_002983499.1| hypothetical protein SELMODRAFT_422836 [Selaginella moellendorffii]
gi|300148742|gb|EFJ15400.1| hypothetical protein SELMODRAFT_422836 [Selaginella moellendorffii]
Length = 1172
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/653 (57%), Positives = 483/653 (73%), Gaps = 15/653 (2%)
Query: 15 LFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCL 74
+ I K+K KR FR FLD + +YFS +RL+LP LDRERG+YGLKESVLA CL
Sbjct: 14 MLERISKSKKLPVKRKTFRTFLDHFYTDREYFSVMRLVLPELDRERGNYGLKESVLAKCL 73
Query: 75 IDALGMSKDSADAVRLINWRKGGAA--PNAGNFPMVAAEVLQRRQGMISGGLTIKELNDL 132
DALG++K S+DA +L+NWRKGG++ NAGNF +VAAE++ RQ SGGLT+K +N+L
Sbjct: 74 ADALGLAKGSSDADKLVNWRKGGSSVGKNAGNFALVAAEIVGSRQSHTSGGLTVKRVNEL 133
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDL 192
LD+LA ++R EK VL+ I KTN EMKW++MIILKDLKLGISEK++F EFHPDA+++
Sbjct: 134 LDQLAEVKSREEKSKVLAEFINKTNPVEMKWLVMIILKDLKLGISEKTVFKEFHPDADEV 193
Query: 193 FNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECK 252
+N TCDLKLVCEKL D R KRQDIEVGKAVRPQLA R+ +A AW+++ GK V+ ECK
Sbjct: 194 YNKTCDLKLVCEKLVDPKVRFKRQDIEVGKAVRPQLASRVKNAEDAWKRMRGKRVIAECK 253
Query: 253 FDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNR 312
FDGDR Q+HK+G+E+H+FSRS +DH E+ AMS +I +NV +CILDGEM+VW+ N+
Sbjct: 254 FDGDRCQVHKDGNEVHFFSRSSIDHVEFAAAMSSVICENVKASKCILDGEMVVWNRVTNK 313
Query: 313 FAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKG 372
FAEFG+ +AK A+DG+ SD QLCY FD+LY+ D SVIHQ L ER +LL++ V G
Sbjct: 314 FAEFGTIHAVAKNAKDGVQSDEQLCYIVFDILYLDDCSVIHQPLCERQKLLEQKVTTVPG 373
Query: 373 RLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPG 432
RLE L PD R G WS+ + +VEKFF T++NR+EGIV+KD SKWEPG
Sbjct: 374 RLELLQPDR------RNCGGQLWSITPQSAADVEKFFLMTVDNREEGIVVKDFDSKWEPG 427
Query: 433 DRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFIS 492
DRSGKW+KLKP+Y++ S++DVLIIGGYYGSGRRGG+VAQFL+ +AERPA YP +F S
Sbjct: 428 DRSGKWMKLKPDYVKE-SEMDVLIIGGYYGSGRRGGDVAQFLLGIAERPA-SGYPTKFHS 485
Query: 493 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII 552
FC+VGTGLSDEE +V KL+PYFRKY+ + PPS+Y VTNN+KERPDVWIE P+KS++
Sbjct: 486 FCKVGTGLSDEECRVLVDKLRPYFRKYDKNTK-PPSYYVVTNNAKERPDVWIEQPDKSVL 544
Query: 553 LSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKE 612
L + SDIR I+SEVF++PYSLRFPR+ RVRYDKPW++CLD+Q V +V G G
Sbjct: 545 LEVKSDIRKIKSEVFASPYSLRFPRVTRVRYDKPWNECLDIQELVRMVAEDAGAGVNGDG 604
Query: 613 YGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
GG K KQ R+ +K K + P H QTDVS +K + + S +VF ++
Sbjct: 605 DGG---RKKKQERAPKKKAPKLPLLAP-HMQQTDVSGVKKVSDMLSGLVFFLV 653
>gi|302784448|ref|XP_002973996.1| hypothetical protein SELMODRAFT_414166 [Selaginella moellendorffii]
gi|300158328|gb|EFJ24951.1| hypothetical protein SELMODRAFT_414166 [Selaginella moellendorffii]
Length = 1171
Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/653 (57%), Positives = 482/653 (73%), Gaps = 15/653 (2%)
Query: 15 LFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCL 74
+ I K+K KR FR FLD + +YFS +RL+LP LDRERG+YGLKESVLA CL
Sbjct: 14 MLERISKSKKLPVKRKTFRTFLDHFYTDREYFSVMRLVLPELDRERGNYGLKESVLAKCL 73
Query: 75 IDALGMSKDSADAVRLINWRKGGAA--PNAGNFPMVAAEVLQRRQGMISGGLTIKELNDL 132
DALG++K S+DA +L+NWRKGG++ NAGNF +VAAE++ RQ SGGLT+K +N+L
Sbjct: 74 ADALGLAKGSSDADKLVNWRKGGSSVGKNAGNFALVAAEIVGSRQSHTSGGLTVKRVNEL 133
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDL 192
LD+LA ++R EK VL+ I KTN EMKW++MIILKDLKLGISEK++F EFHPDA+++
Sbjct: 134 LDQLAEVKSREEKSKVLAEFINKTNPVEMKWLVMIILKDLKLGISEKTVFKEFHPDADEV 193
Query: 193 FNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECK 252
+N TCDLKLVCEKL D R KRQDIEVGKAVRPQLA R+ +A AW+++ GK V+ ECK
Sbjct: 194 YNKTCDLKLVCEKLVDPKVRFKRQDIEVGKAVRPQLASRVKNAEDAWKRMRGKRVIAECK 253
Query: 253 FDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNR 312
FDGDR Q+HK+G+E+H+FSRS +DH E+ AMS +I +NV +CILDGEM+VW+ N+
Sbjct: 254 FDGDRCQVHKDGNEVHFFSRSSIDHVEFAAAMSSVICENVKASKCILDGEMVVWNRVTNK 313
Query: 313 FAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKG 372
FAEFG+ +AK A+DG+ SD QLCY FD+LY+ D SVIHQ L ER +LL++ V G
Sbjct: 314 FAEFGTIHAVAKNAKDGVQSDEQLCYIVFDILYLDDCSVIHQPLCERQKLLEQKVTTVPG 373
Query: 373 RLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPG 432
R E L PD R G WS+ + +VEKFF T++NR+EGIV+KD SKWEPG
Sbjct: 374 RFELLQPDR------RNCGGQLWSITPQSAADVEKFFLMTVDNREEGIVVKDFDSKWEPG 427
Query: 433 DRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFIS 492
DRSGKW+KLKP+Y++ S++DVLIIGGYYGSGRRGG+VAQFL+ +AERPA YP +F S
Sbjct: 428 DRSGKWMKLKPDYVKE-SEMDVLIIGGYYGSGRRGGDVAQFLLGIAERPA-SGYPTKFHS 485
Query: 493 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII 552
FC+VGTGLSDEE +V KL+PYFRKY+ + PPS+Y VTNN+KERPDVWIE P+KS++
Sbjct: 486 FCKVGTGLSDEECRVLVDKLRPYFRKYDKNTK-PPSYYVVTNNAKERPDVWIEQPDKSVL 544
Query: 553 LSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKE 612
L + SDIR I+SEVF++PYSLRFPR+ RVRYDKPW++CLD+Q V +V G G
Sbjct: 545 LEVKSDIRKIKSEVFASPYSLRFPRVTRVRYDKPWNECLDIQELVRMVAEDTGAGVNGDG 604
Query: 613 YGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
GG K KQ RS +K K + P H QTDVS +K + + S +VF ++
Sbjct: 605 DGG---RKKKQERSPKKKAPKLPLLAP-HMQQTDVSGVKKVSDMLSGLVFFLV 653
>gi|449516627|ref|XP_004165348.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 4-like, partial [Cucumis
sativus]
Length = 918
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 291/369 (78%), Positives = 325/369 (88%), Gaps = 2/369 (0%)
Query: 297 CILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSL 356
CILDGEMLVWD SLNRFAEFGSNQEIA+AA+DG S+RQLCY AFDVLYVGDTSVIH+SL
Sbjct: 1 CILDGEMLVWDKSLNRFAEFGSNQEIARAAKDGFDSNRQLCYVAFDVLYVGDTSVIHRSL 60
Query: 357 KERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENR 416
KERHELL+ VVKP KG+LE LVP+ GLNS G P WS+ A+NVD+VE+FFK TIENR
Sbjct: 61 KERHELLRDVVKPVKGQLEVLVPNDGLNSDC--AGYPSWSIRAYNVDDVERFFKSTIENR 118
Query: 417 DEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVA 476
DEGIV+KDLGSKWEPGDRSGKWLKLKP+Y+RAGSDLD LIIGGYYGSGRRGGEVAQFL+
Sbjct: 119 DEGIVIKDLGSKWEPGDRSGKWLKLKPDYVRAGSDLDALIIGGYYGSGRRGGEVAQFLMG 178
Query: 477 LAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNS 536
LAERP + YPRRF+SFCRVGTGL+DEELDAVV KLKPYFRK EYP++ PSFYQVTNNS
Sbjct: 179 LAERPPSNAYPRRFVSFCRVGTGLTDEELDAVVNKLKPYFRKSEYPRKTAPSFYQVTNNS 238
Query: 537 KERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSF 596
KERPDVWIESPEKSIILSITSDIRTI+SEVF+APYSLRFPRIDRVRYDKPWH+CLDVQSF
Sbjct: 239 KERPDVWIESPEKSIILSITSDIRTIKSEVFAAPYSLRFPRIDRVRYDKPWHECLDVQSF 298
Query: 597 VELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSI 656
VELVHSSNGTTQ+G G QD K K +S KG KK+VS+VPSH LQTD++ I ++ I
Sbjct: 299 VELVHSSNGTTQRGTNNSGRQDSKGKYIKSIGKGRKKSVSVVPSHLLQTDITGITEDSLI 358
Query: 657 FSDMVFCIL 665
FS+M+F I+
Sbjct: 359 FSNMLFYIV 367
>gi|308809329|ref|XP_003081974.1| DNA ligase IV (ISS) [Ostreococcus tauri]
gi|116060441|emb|CAL55777.1| DNA ligase IV (ISS) [Ostreococcus tauri]
Length = 1111
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 263/718 (36%), Positives = 379/718 (52%), Gaps = 108/718 (15%)
Query: 20 QKTKPAAKKRSKFRKFLD---------TYCDSVDYFSALRLILPSLDRERGSYGLKESVL 70
+K AA++ + F D T CD+ F A RL++P+LD+ER +Y LK L
Sbjct: 64 RKKANAARRYAALDAFHDVCLVSTRDGTRCDA---FDAYRLLIPTLDKERETYRLKHDAL 120
Query: 71 ANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISG-------- 122
A C++ A M++ S DA L +W++ G GNFP EVL+R G + G
Sbjct: 121 AKCVVSAFDMARASEDAKTLEDWKQKGG----GNFPQAVREVLER--GHLQGREGDADVR 174
Query: 123 GLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
LTI E+ND LD LA+ E++ E+ + L L K +A +KW IILK+ KL + +K+I
Sbjct: 175 ELTIGEVNDTLDELAACESKHERAATLRKLFGKMDAVMVKWACAIILKETKLRMGDKAIM 234
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKA-VRPQLAMRIGDAHAAWRK 241
+H DAEDLF+ T DL+ VCE L R+ R KR DI VG+ + PQLA+R A A +
Sbjct: 235 RHYHRDAEDLFDWTSDLRRVCEDLPRRDVRLKRADINVGEGLINPQLALRKNTADAIMKT 294
Query: 242 LHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGH-AMSKIIEQNVLVDRCILD 300
L G++ +IE KFDG+RIQ+HK+G I+Y++R+ D G+ M+ + L RCILD
Sbjct: 295 LRGRQFIIETKFDGERIQLHKDGEIINYWTRNMNDFGPRGYDVMNGLFRH--LPKRCILD 352
Query: 301 GEMLVWDTSLNRFAEFGSNQEIAKAAR---------------------------DGLSS- 332
GE+LVW+ + FG+ + + KAA D SS
Sbjct: 353 GELLVWNKLRETWHPFGAIKTLIKAANLRKSKDEVFPLSNDTDDRDDGDDIAGYDPKSSK 412
Query: 333 --------------DRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPS-------K 371
D +L Y FD+LY+GD SV H L ERH L++ V P K
Sbjct: 413 YEWYQEYMKKLTYGDLELVYVPFDILYIGDESVRHLQLVERHAKLREHVHPVSAMCGNIK 472
Query: 372 GRLETLVPDHGLNSHVRPQGEPC-WSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWE 430
R+ PD C +S + ++E+ E IE DEG+V+KDL S+W
Sbjct: 473 ARILLATPD-------------CEFSKIGSTKQDIERALLEAIEAGDEGLVIKDLNSEWI 519
Query: 431 PGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGR-RGGEVAQFLVALAERPAPDTYPR- 488
PGDRSG W+K+KP+Y ++ DLDVL+IGGYYG+G RGG+++QFLV + E T
Sbjct: 520 PGDRSGNWMKIKPDYCKS-EDLDVLLIGGYYGAGELRGGKISQFLVGIIESTNDPTSAHG 578
Query: 489 -RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESP 547
+ +SFC+VGTG+S ELD + +L Y + E P+ Y VT+ ERPDVWI P
Sbjct: 579 IKIMSFCKVGTGISATELDDLRNRLGDYMHR-EKPREMD---YNVTDAYSERPDVWIWPP 634
Query: 548 EKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTT 607
++S+++ + DIR IRS ++ YSLRFPR+ +RYDK W D L +++
Sbjct: 635 QRSVVVRVKGDIRCIRSMTYATGYSLRFPRVTGIRYDKTWSDILTNAELKQIIEEDRPNI 694
Query: 608 QKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
G + K R +++P+H + DVS + E+ +F + I+
Sbjct: 695 AMDMGEGHMNSRK-------RTRAAALTTLLPAHLMPVDVSGVVPESEVFKSLQIHIV 745
>gi|145351923|ref|XP_001420309.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580543|gb|ABO98602.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 994
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 258/720 (35%), Positives = 392/720 (54%), Gaps = 97/720 (13%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFR-KFLDTYCDS----------VDYFSALRLILPSLDRER 60
L F +Q + +K S R + LDT D VD F A RLILP+LD+ER
Sbjct: 56 LCGAFEALQNERGRSKATSARRYRVLDTLHDRCLVSARDGTRVDAFDAYRLILPALDKER 115
Query: 61 GSYGLKESVLANCLIDALGMSKDSADAVRLINW-RKGGAAPNAGNFPMVAAEVL------ 113
G+Y LK LA ++ A MS+ S DA +L +W RKGG GNFP V +VL
Sbjct: 116 GAYFLKHDALAKVVVSAFDMSRASEDAKKLEDWKRKGG-----GNFPQVVRDVLAGGHLA 170
Query: 114 QRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLK 173
R + + LTI ++N+ LD LA+ +N+ ++ S L L K +A ++KW IILK+ K
Sbjct: 171 DREKDEDARTLTIGDVNEALDALAACDNKDQRASTLRALFSKMDATQVKWTCAIILKETK 230
Query: 174 LGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKA-VRPQLAMRI 232
+ + EK+I +H +A DL++ T DL+ VCE L R+ R KR+DI+VG + PQ+A R
Sbjct: 231 ISMGEKAILRHYHSEANDLWDWTSDLRRVCEDLPRRDFRMKREDIDVGVGLINPQMARRQ 290
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNV 292
A +R L G + VIE KFDG+RIQIHK+G I+Y++R+ D G+ + + ++
Sbjct: 291 NSIDAVYRALKGTQFVIETKFDGERIQIHKDGDIINYWTRNMNDFGPRGYDVMNALFRH- 349
Query: 293 LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAA------------------RDGLSSDR 334
L RCILDGE++VW+ ++ FG+ + + KAA RDG SD
Sbjct: 350 LPKRCILDGELMVWNKLRDQSYPFGALKNLIKAANMRKAKDELFPLKAHLENRDGGDSDG 409
Query: 335 ------------------------QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPS 370
+L Y FD+LY D SV L+ERHELL++ V+
Sbjct: 410 EEDLMSSKYAWYAENVKKLTYGDLELVYVPFDILYAVDRSVKTHKLRERHELLKEHVR-- 467
Query: 371 KGRLETLVPDHGLNSHVRPQGEPC-WSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKW 429
E V + + + C +S V +++E+ E ++N +EG+V+KDL W
Sbjct: 468 ----EVSVMCGNIRARILLATPDCAFSRVGSTKEDIERALLEAMDNGEEGLVIKDLDGPW 523
Query: 430 EPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGR-RGGEVAQFLVALAE------RPA 482
PGDRS W+K+KP+Y+ + DLDV++IGGYYG+G RGG+++QFL + E A
Sbjct: 524 IPGDRSNNWMKIKPDYL-SSEDLDVVLIGGYYGAGELRGGKISQFLCGIVEATNDPISTA 582
Query: 483 PDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDV 542
D + +SFC+VGTG+S +LD + ++L + + E P+ Y VT+ E+PDV
Sbjct: 583 SDGV--KIMSFCKVGTGISAMQLDDLRSRLGDFMHR-EKPQDMN---YNVTDAYNEKPDV 636
Query: 543 WIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
WI P++S+++++ DIR IR+ F+ YSLRFPR+ +RYDK W D L + ++ +
Sbjct: 637 WIWPPQRSLVVTVKGDIRAIRTTTFATGYSLRFPRVTGIRYDKKWSDILTLCDLLKTIEE 696
Query: 603 SNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKN--VSIVPSHFLQTDVSDIKGETSIFSDM 660
T + + D + ++RK + +++P+H + DVS + E+ IF +M
Sbjct: 697 EVPTLK-------VNIDDTRGGTNARKRSRTTGPATLLPAHLMPVDVSGVVQESEIFKNM 749
>gi|384252539|gb|EIE26015.1| hypothetical protein COCSUDRAFT_40196 [Coccomyxa subellipsoidea
C-169]
Length = 1267
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 255/715 (35%), Positives = 387/715 (54%), Gaps = 70/715 (9%)
Query: 3 KTEETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCD--SVDYFSALRLILPSLDRER 60
K E L F+ K +++K+ R F + + + S D + RL+ PSLD+ER
Sbjct: 4 KPSELRFKTLCDFFDACASRKKSSRKKELLRDFANKFIERGSSDVYEIYRLMAPSLDKER 63
Query: 61 GSYGLKESVLANCLIDALGM-SKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQR---- 115
Y L+E+ L LI A + K S+ A R NWR+ G NAG F V E L R
Sbjct: 64 DHYNLREANLVRVLIKACLLDPKTSSAAKRAENWRQAGVK-NAGQFSNVMEEYLFRTCCG 122
Query: 116 RQGMISGG--LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLK 173
+Q +SG LT+ ELND+L++LA E++ + + LI+ T A +M+WI+ I+L+DLK
Sbjct: 123 KQRGMSGEAELTVGELNDILNKLAGGGGE-EQVKLFTHLIQITTATQMRWIVQIVLRDLK 181
Query: 174 LGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIG 233
+G+SE SI E+H DA + +NVTCD V +L D ++R QDI+VGK +PQLA +
Sbjct: 182 IGLSETSILKEYHVDAVERYNVTCDFPGVIRELTDPHKRFPFQDIKVGKPAKPQLARAVK 241
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGH--AMSKIIEQN 291
A+ + G+ V+E KFDG+R+Q+H E+ Y+SR ++H Y H + I +
Sbjct: 242 GPEEAFNIMKGRPFVVETKFDGERMQVHVMEDEVQYYSRRGIEHGTYSHYTMLDSFIRKQ 301
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR----------------- 334
+ ILDGE++VW+ + +F FG + AA+D D
Sbjct: 302 LRETNVILDGEVVVWNKTKKKFEPFGGMKGAVLAAKDNKGPDEKLEMNGWHGDTMTSDPD 361
Query: 335 ---------QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPS-----------KGRL 374
+L + FD+LY+ D SVI+++L ERHELL+++V P+ GR+
Sbjct: 362 YETPFVKDLELVFVVFDILYLRDQSVINRTLLERHELLKELVIPAPAEGHPVSCAMTGRM 421
Query: 375 ETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDR 434
L+P L + V S +++ +D++++ F+E+I +EGIV+K S W DR
Sbjct: 422 VCLLPGAPLITGVP------GSKLSYVLDDIQEKFEESIRVNEEGIVVKAADSPWRCNDR 475
Query: 435 SGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERP-APDTYPRRFISF 493
WLK+K +Y+ ++D +IIG +G+GRRGG +A++L+ALAE P T P F+SF
Sbjct: 476 GMAWLKIKADYVHK-VEIDAVIIGAKFGTGRRGGAIAEYLLALAEVPQGGTTEPSTFVSF 534
Query: 494 CRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIIL 553
C VGTG++D + D + +L+P F K P Y+ T KERPDVWI+ P +S++L
Sbjct: 535 CVVGTGVNDADRDTLAKRLEPLFVDNVKGKNCVPRCYRTTGMPKERPDVWIKDPTRSVVL 594
Query: 554 SITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEY 613
+ +D+RTI S+ F++ +SLRFPR+ RVR+DK D Q ++V S+ G G+
Sbjct: 595 QVQADVRTIVSKQFASRHSLRFPRVQRVRWDKGPLDIQTDQELWDIVESNQGAIVGGE-- 652
Query: 614 GGLQDDKPK------QFRSSRKGE---KKNVSIVPSHFLQTDVSDIKGETSIFSD 659
G + P + + KG + S V FL TDVS I+ E D
Sbjct: 653 -GHDMESPAGKGKGRGKKRAVKGAATPAQQRSKVVEQFLPTDVSHIRRECDALRD 706
>gi|296188957|ref|XP_002742576.1| PREDICTED: DNA ligase 4 isoform 1 [Callithrix jacchus]
Length = 911
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 242/679 (35%), Positives = 383/679 (56%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVD------------YFSALRLILPSLDRE 59
L S IQKTK A+K FR+FLD++ + D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKTKGRAEKIRHFREFLDSWRNFHDALHKNQKDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + +D DA++L+N+R G ++G+F M+A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHGDSGDFAMIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++NDLLD +AS+ + K V L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQQVNDLLDSVASNNSAKRKDLVKKSLLQLITQSSALEQKWLIRMIIKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S+++IF FH DA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 198 VSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-IADI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G YFSR+ +++ ++G +++ I
Sbjct: 257 EHIEKDMKHQTFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTDQFGASPTEGSLTPFIH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G +I + D SD Q CY FDVL V
Sbjct: 317 NAFQTDIHICILDGEMMAYNPNTQTFMQKGIKFDIKRMVED---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + H++L++R+E+L + P GR+E + AH DEV
Sbjct: 374 NKKLGHETLRKRYEILNSIFTPIPGRIEVVQKTQ-----------------AHTKDEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMIKRPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE+P P P F + RVG+G + +EL + +L Y+R + K+ P
Sbjct: 477 GGMMSHFLCAVAEKPPPGKKPSVFHTLSRVGSGCTMKELYDLGLRLAKYWRPFH--KKTP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDIYKTGCTLRFPRIEKIRDDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+C+ + +L ++G Y G D P++ R + KK + I+ H +
Sbjct: 590 WHECMTLDDLEQLRGKASGKLASKHFYVGGDDGPPEKKRKAPPKMKKVIGII-EHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
++++ ++IF D+VFC++
Sbjct: 649 LTNVNKISNIFEDVVFCVM 667
>gi|197101141|ref|NP_001126522.1| DNA ligase 4 [Pongo abelii]
gi|75041273|sp|Q5R6L3.1|DNLI4_PONAB RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|55731786|emb|CAH92597.1| hypothetical protein [Pongo abelii]
Length = 911
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 240/679 (35%), Positives = 384/679 (56%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQK+K A+K FR+FLD++ D D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKSKGRAEKIRHFREFLDSWRKFHDAFHKNQKDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F M+A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHGDAGDFAMIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++NDLLD +AS+ + K + L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLITQSSALEQKWLIRMIIKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S+++IF FH DA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 198 VSQQTIFSVFHSDAVELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-IADI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G YFSR+ +++ ++G +++ I
Sbjct: 257 EHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTDQFGASPTEGSLTPFIH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G+ +I + D SD Q CY FDVL V
Sbjct: 317 NAFKTDIQICILDGEMMAYNPNTQTFMQKGTKFDIKRMVED---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + H++L++R+E+L + P GR+E + AH +EV
Sbjct: 374 NKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQ-----------------AHTKNEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++ + K+AP
Sbjct: 477 GGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWKPFH--KKAP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPRIEKIRDDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+C+ + +L ++G Y G DD+P++ + + K V + H +
Sbjct: 590 WHECMTLDDLEQLRGKASGKLASKHFYVG-GDDEPQEKKRKAAPKMKKVIGIIEHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
++++ ++IF D+ FC++
Sbjct: 649 LTNVNKISNIFEDVEFCVM 667
>gi|332242088|ref|XP_003270216.1| PREDICTED: DNA ligase 4 isoform 1 [Nomascus leucogenys]
gi|332242090|ref|XP_003270217.1| PREDICTED: DNA ligase 4 isoform 2 [Nomascus leucogenys]
gi|332242092|ref|XP_003270218.1| PREDICTED: DNA ligase 4 isoform 3 [Nomascus leucogenys]
gi|332242094|ref|XP_003270219.1| PREDICTED: DNA ligase 4 isoform 4 [Nomascus leucogenys]
Length = 911
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 239/679 (35%), Positives = 383/679 (56%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVD------------YFSALRLILPSLDRE 59
L S IQK+K A+K FR+FLD++ D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKSKGRAEKIRHFREFLDSWRKFHDALHKNQKEVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F M+A VL+ R
Sbjct: 79 RMAYGIKETMLAKFYIELLNLPRDGKDALKLLNYRTPTGTHGDAGDFAMIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++NDLLD +AS+ + K + L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLISQSSALEQKWLIRMIIKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S+++IF FH DA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 198 VSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-IADI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G YFSR+ +++ ++G +++ I
Sbjct: 257 EHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTDQFGASPTEGSLTPFIH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G+ +I + D SD Q CY FDVL V
Sbjct: 317 NAFKTDIQICILDGEMMAYNPNTQTFMQKGTKFDIKRMVED---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + H++L++R+E+L + P GR+E + AH +EV
Sbjct: 374 NKKLGHETLRKRYEILSNIFTPIPGRIEIVQKTQ-----------------AHTKNEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVSGLIDELDILIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++ + K+AP
Sbjct: 477 GGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGYTMKELYDLGLKLAKYWKPFH--KKAP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPRIEKIRDDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+C+ + +L ++G Y G DD+P++ + + K V + H +
Sbjct: 590 WHECMTLDDLEQLRGKASGKLASKHLYVG-GDDEPQEKKRKAAPKMKKVIGIIEHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
++++ ++IF D+ FC++
Sbjct: 649 LTNVNKISNIFEDVEFCVM 667
>gi|403272943|ref|XP_003928292.1| PREDICTED: DNA ligase 4 isoform 1 [Saimiri boliviensis boliviensis]
gi|403272945|ref|XP_003928293.1| PREDICTED: DNA ligase 4 isoform 2 [Saimiri boliviensis boliviensis]
Length = 911
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 243/679 (35%), Positives = 380/679 (55%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQKTK A+K FR+FLD++ D D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKTKGRAEKIRYFREFLDSWRKFHDALHKNQKDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F M+A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHGDAGDFAMIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++NDLLD +AS+ + K V L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQQVNDLLDSVASNNSAKRKDLVKKSLLQLITQSSALEQKWLIRMIIKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S+++IF FH DA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 198 VSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-IADI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G YFSR+ +++ ++G +++ I
Sbjct: 257 EHIEKDMRHQTFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTDQFGASPAEGSLTPFIH 316
Query: 290 QNVLVDR--CILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G +I + D SD Q CY FDVL V
Sbjct: 317 NAFQTDTQICILDGEMMAYNPNTQTFMQKGIKFDIKRMVED---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + H++L++R E+L + P GR+E + AH DEV
Sbjct: 374 NKKLGHETLRKRSEILSSIFTPIPGRIEIVQKTQ-----------------AHTKDEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD++I+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMIKYPLSIYKPDKRGEGWLKIKPEYVSGLMDELDIIIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y+R + K+ P
Sbjct: 477 GGMMSHFLCAVAEKPPPGKKPSVFHTLSRVGSGYTMKELYDLGLKLAKYWRPFH--KKTP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GSEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPRIEKIRDDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+C+ + +L + G Y G D P++ R + KK + I+ H +
Sbjct: 590 WHECMTLDDLEQLRGKACGKLASKHLYIGGDDGPPEKKRKAPPKIKKVIGII-EHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
++++ ++IF D+ FC++
Sbjct: 649 LTNVNKISNIFEDVEFCVM 667
>gi|395833277|ref|XP_003789666.1| PREDICTED: DNA ligase 4 [Otolemur garnettii]
Length = 912
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 239/679 (35%), Positives = 385/679 (56%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVD------------YFSALRLILPSLDRE 59
L S IQK+K +K FR+FLD++ D ++ A+RLILP L+RE
Sbjct: 20 LCSTLERIQKSKGREEKIRHFREFLDSWRKFHDALHKNQKNVTDSFYPAMRLILPQLERE 79
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + ++ DA++L+N+R G +AG+F M+A VL+ R
Sbjct: 80 RMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTRGDAGDFAMIAYFVLRPR-C 138
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++NDLLD +AS+ + K V L LI +++A E KW+I +ILKDLKLG
Sbjct: 139 LKKGSLTIQQVNDLLDSVASNNSAKRKDLVKKSLLQLISQSSALEQKWLIRMILKDLKLG 198
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S++++F FH DA +L NV+ DL+ VC +L D + I + A +P LA I D
Sbjct: 199 VSQQTVFSVFHNDAVELHNVSTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-IADI 257
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKIIE 289
+ + + IE K DG+RIQ+HK+G+ YFSR+ +++E +G ++S I
Sbjct: 258 ERIEKDMKHQSFYIETKLDGERIQMHKDGTVYEYFSRNGYNYTEQFGASPDKGSLSPFIH 317
Query: 290 QNVLVDR--CILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G +I + D SD Q CY FDVL V
Sbjct: 318 NAFKTDVQICILDGEMMAYNPNTQTFMQKGIKFDIKRMVED---SDLQTCYCVFDVLMVN 374
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + H++L++RHE+L ++ P GR+E + AH+ +EV
Sbjct: 375 NKKLAHETLRKRHEILSSILTPIPGRIEIVQKTQ-----------------AHSKNEVID 417
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EG+++K S ++P R WLK+KPEY+ D LD+LI+GGY+G G R
Sbjct: 418 ALNEAIDKREEGVMIKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGSR 477
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE+P P P F + RVG+G + +EL + KL +++ + K+AP
Sbjct: 478 GGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGYTMKELYDLGLKLAKHWKPFN--KKAP 535
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P S+I+ + + + S+++ +LRFPRI+++R DK
Sbjct: 536 PSSILC---GTEKPEVYIE-PCNSVIVQVKA-AEIVPSDMYKTGCTLRFPRIEKIRDDKE 590
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+C+ + +L ++G + G+ DD+P++ + + K V V H +
Sbjct: 591 WHECMTLDDLEQLRGKASGKLASKHFFVGI-DDEPQEKKRKAAPKIKKVIGVIEHLKAPN 649
Query: 647 VSDIKGETSIFSDMVFCIL 665
+S+I +++F D+ FC++
Sbjct: 650 LSNINKVSNVFEDVEFCVM 668
>gi|23199993|ref|NP_002303.2| DNA ligase 4 [Homo sapiens]
gi|46255052|ref|NP_996820.1| DNA ligase 4 [Homo sapiens]
gi|148539894|ref|NP_001091738.1| DNA ligase 4 [Homo sapiens]
gi|88911290|sp|P49917.2|DNLI4_HUMAN RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|22766796|gb|AAH37491.1| Ligase IV, DNA, ATP-dependent [Homo sapiens]
gi|119629499|gb|EAX09094.1| ligase IV, DNA, ATP-dependent, isoform CRA_a [Homo sapiens]
gi|119629500|gb|EAX09095.1| ligase IV, DNA, ATP-dependent, isoform CRA_a [Homo sapiens]
gi|119629501|gb|EAX09096.1| ligase IV, DNA, ATP-dependent, isoform CRA_a [Homo sapiens]
gi|123983318|gb|ABM83400.1| ligase IV, DNA, ATP-dependent [synthetic construct]
gi|123998021|gb|ABM86612.1| ligase IV, DNA, ATP-dependent [synthetic construct]
Length = 911
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 239/679 (35%), Positives = 384/679 (56%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQK+K A+K FR+FLD++ D D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKSKGRAEKIRHFREFLDSWRKFHDALHKNHKDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F M+A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHGDAGDFAMIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++NDLLD +AS+ + K + L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLITQSSALEQKWLIRMIIKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S+++IF FH DA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 198 VSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-IADI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G YFSR+ +++ ++G +++ I
Sbjct: 257 EHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTDQFGASPTEGSLTPFIH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G+ +I + D SD Q CY FDVL V
Sbjct: 317 NAFKADIQICILDGEMMAYNPNTQTFMQKGTKFDIKRMVED---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + H++L++R+E+L + P GR+E + AH +EV
Sbjct: 374 NKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQ-----------------AHTKNEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++ + ++AP
Sbjct: 477 GGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWKPFH--RKAP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPRIEKIRDDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+C+ + +L ++G Y G DD+P++ + + K V + H +
Sbjct: 590 WHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKKRKAAPKMKKVIGIIEHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
++++ ++IF D+ FC++
Sbjct: 649 LTNVNKISNIFEDVEFCVM 667
>gi|114650627|ref|XP_509726.2| PREDICTED: DNA ligase 4 isoform 2 [Pan troglodytes]
gi|114650629|ref|XP_001135359.1| PREDICTED: DNA ligase 4 isoform 1 [Pan troglodytes]
gi|332841618|ref|XP_003314254.1| PREDICTED: DNA ligase 4 [Pan troglodytes]
gi|410216076|gb|JAA05257.1| ligase IV, DNA, ATP-dependent [Pan troglodytes]
gi|410216078|gb|JAA05258.1| ligase IV, DNA, ATP-dependent [Pan troglodytes]
gi|410259034|gb|JAA17483.1| ligase IV, DNA, ATP-dependent [Pan troglodytes]
gi|410259036|gb|JAA17484.1| ligase IV, DNA, ATP-dependent [Pan troglodytes]
gi|410299716|gb|JAA28458.1| ligase IV, DNA, ATP-dependent [Pan troglodytes]
gi|410338935|gb|JAA38414.1| ligase IV, DNA, ATP-dependent [Pan troglodytes]
gi|410338937|gb|JAA38415.1| ligase IV, DNA, ATP-dependent [Pan troglodytes]
Length = 911
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 239/679 (35%), Positives = 384/679 (56%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQK+K A+K FR+FLD++ D D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKSKGRAEKIRHFREFLDSWRKFHDALHKNHKDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F M+A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHGDAGDFAMIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++NDLLD +AS+ + K + L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLITQSSALEQKWLIRMIIKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S+++IF FH DA +L NVT DL+ VC +L D + I + A +P LA I +
Sbjct: 198 VSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-IANI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G YFSR+ +++ ++G +++ I
Sbjct: 257 EHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTDQFGASSTEGSLTPFIH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G+ +I + D SD Q CY FDVL V
Sbjct: 317 NAFKADIQICILDGEMMAYNPNTQTFMQKGTKFDIKRMVED---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + H++L++R+E+L + P GR+E + AH +EV
Sbjct: 374 NKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQ-----------------AHTKNEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++ + ++AP
Sbjct: 477 GGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWKPFH--RKAP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPRIEKIRDDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+C+ + +L ++G Y G DD+P++ R + K V + H +
Sbjct: 590 WHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKRRKAAPKMKKVIGIIEHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
++++ ++IF D+ FC++
Sbjct: 649 LTNVNKISNIFEDVEFCVM 667
>gi|189054575|dbj|BAG37361.1| unnamed protein product [Homo sapiens]
Length = 911
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 239/679 (35%), Positives = 383/679 (56%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQK+K A+K FR+FLD++ D D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKSKGRAEKIRHFREFLDSWRKFHDALHKNHKDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F M+A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHGDAGDFAMIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++NDLLD +AS+ K + L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQQVNDLLDSIASNNTAKRKDLIKKSLLQLITQSSALEQKWLIRMIIKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S+++IF FH DA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 198 VSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-IADI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G YFSR+ +++ ++G +++ I
Sbjct: 257 EHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTDQFGASPTEGSLTPFIH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G+ +I + D SD Q CY FDVL V
Sbjct: 317 NAFKADIQICILDGEMMAYNPNTQTFMQKGTKFDIKRMVED---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + H++L++R+E+L + P GR+E + AH +EV
Sbjct: 374 NKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQ-----------------AHTKNEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++ + ++AP
Sbjct: 477 GGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWKPFH--RKAP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCALRFPRIEKIRDDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+C+ + +L ++G Y G DD+P++ + + K V + H +
Sbjct: 590 WHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKKRKAAPKMKKVIGIIEHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
++++ ++IF D+ FC++
Sbjct: 649 LTNVNKISNIFEDVEFCVM 667
>gi|426375938|ref|XP_004054771.1| PREDICTED: DNA ligase 4 isoform 1 [Gorilla gorilla gorilla]
gi|426375940|ref|XP_004054772.1| PREDICTED: DNA ligase 4 isoform 2 [Gorilla gorilla gorilla]
gi|426375942|ref|XP_004054773.1| PREDICTED: DNA ligase 4 isoform 3 [Gorilla gorilla gorilla]
Length = 911
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 238/679 (35%), Positives = 384/679 (56%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQK++ A+K FR+FLD++ D D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKSRGRAEKIRHFREFLDSWRKFHDALHKNHKDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F M+A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHGDAGDFAMIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++NDLLD +AS+ + K + L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLITQSSALEQKWLIRMIIKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S+++IF FH DA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 198 VSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-IADI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G YFSR+ +++ ++G +++ I
Sbjct: 257 EHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTDQFGASPTEGSLTPFIH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G+ +I + D SD Q CY FDVL V
Sbjct: 317 NAFKTDIQICILDGEMMAYNPNTQTFMQKGTKFDIKRMVED---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + H++L++R+E+L + P GR+E + AH +EV
Sbjct: 374 NKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQ-----------------AHTKNEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++ + ++AP
Sbjct: 477 GGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWKPFH--RKAP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPRIEKIRDDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+C+ + +L ++G Y G DD+P++ + + K V + H +
Sbjct: 590 WHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKKRKAAPKMKKVIGIIEHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
++++ ++IF D+ FC++
Sbjct: 649 LTNVNKISNIFEDVEFCVM 667
>gi|397524265|ref|XP_003832121.1| PREDICTED: DNA ligase 4 isoform 1 [Pan paniscus]
gi|397524267|ref|XP_003832122.1| PREDICTED: DNA ligase 4 isoform 2 [Pan paniscus]
gi|397524269|ref|XP_003832123.1| PREDICTED: DNA ligase 4 isoform 3 [Pan paniscus]
gi|397524271|ref|XP_003832124.1| PREDICTED: DNA ligase 4 isoform 4 [Pan paniscus]
Length = 911
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 238/679 (35%), Positives = 384/679 (56%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQK+K A+K FR+FLD++ D D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKSKGRAEKIRHFREFLDSWRKFHDALHKNHKDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F M+A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHGDAGDFAMIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++NDLLD +AS+ + K + L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLITQSSALEQKWLIRMIIKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S+++IF FH DA +L NVT DL+ VC +L D + I + A +P LA I +
Sbjct: 198 VSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-IANI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G +FSR+ +++ ++G +++ I
Sbjct: 257 EHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKFFSRNGYNYTDQFGASSTEGSLTPFIH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G+ +I + D SD Q CY FDVL V
Sbjct: 317 NAFKADIQICILDGEMMAYNPNTQTFMQKGTKFDIKRMVED---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + H++L++R+E+L + P GR+E + AH +EV
Sbjct: 374 NKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQ-----------------AHTKNEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++ + ++AP
Sbjct: 477 GGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWKPFH--RKAP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPRIEKIRDDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+C+ + +L ++G Y G DD+P++ R + K V + H +
Sbjct: 590 WHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKRRKAAPKMKKVIGIIEHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
++++ ++IF D+ FC++
Sbjct: 649 LTNVNKISNIFEDVEFCVM 667
>gi|351702718|gb|EHB05637.1| DNA ligase 4 [Heterocephalus glaber]
Length = 911
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 240/679 (35%), Positives = 383/679 (56%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S +QK+K A+K F++FLD++ D D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERMQKSKGRAEKIRHFKEFLDSWRKFHAALHKNQKDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + ++ DA++L+N+R G +AG+F ++A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTRGDAGDFAVIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G L I+++N+LLD +AS+ + +K V L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLNIQQVNELLDSIASNNSARKKDLVKKSLLQLITQSSALEQKWLIRMIVKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
SEK+IF FH DA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 198 FSEKTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-IADI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVL- 293
+ + + IE K DG+R+Q+HK+G YFSR+ +++E +G + S+ +
Sbjct: 257 EHIEKDMKHQSFYIETKLDGERMQMHKDGDVYQYFSRNGYNYTEQFGASPSEGSLTPFIY 316
Query: 294 ------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
V CILDGEM+ ++ + F + G+ +I + D SD Q CY FDVL V
Sbjct: 317 NAFKPDVQICILDGEMMAYNPNTQTFMQKGNKFDIKRMVED---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + ++L++R+E+L + P GR+E + AH EV
Sbjct: 374 NKKLGRETLRKRYEILNSIFTPVSGRMEVIQKAQ-----------------AHTKKEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDILIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE+P P P F + CRVG+G + +EL + KL +++ ++ K+AP
Sbjct: 477 GGMMSHFLCAVAEKPPPGEKPAVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFQ--KKAP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P S+I+ I + + SE++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GTEKPEVYIE-PRNSVIVQIKA-AEIVPSEMYKTSCTLRFPRIEKIRDDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+C+ + +L ++G Y G DD+PK+ + + K V + + +
Sbjct: 590 WHECMTLDELEQLRGKASGKLASKHLYVG-SDDEPKEKKRKAAPKMKKVIGILENLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
+S+I ++IF D+ FC++
Sbjct: 649 LSNISKVSNIFEDVEFCVM 667
>gi|327261085|ref|XP_003215362.1| PREDICTED: DNA ligase 4-like [Anolis carolinensis]
Length = 911
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 237/681 (34%), Positives = 382/681 (56%), Gaps = 60/681 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S +QK K +K F++FLD++ D D ++ A+RLILP L+RE
Sbjct: 24 LCSTLERMQKGKSRQEKTKYFKEFLDSWRKFHDALHKNEKDVTDSFYPAMRLILPQLERE 83
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + KD DA++L+N+R G+ +AG+F M+A VL+ R
Sbjct: 84 RMAYGIKETMLAKLYIELLNLPKDGKDALKLLNYRTPTGSRGDAGDFAMIAYFVLKPRCP 143
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
G LTI+++NDLLD ++++ K V L LI +++A E KW+I +I+KDLKLG
Sbjct: 144 K-QGQLTIQQVNDLLDSVSTNNAAKRKDLVKKCLLQLITQSSALEQKWLIRMIIKDLKLG 202
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S+++IF FHPDA +L NVT DL+ VC +L + I + A +P LA I +
Sbjct: 203 VSQQTIFSIFHPDATELHNVTTDLEKVCRQLHHPSVFLSDVSITLFSAFKPMLAA-IANI 261
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGHA---------MS 285
++++ + IE K DG+R+Q+HK+G YFSR+ D++ ++G + +
Sbjct: 262 QQIEKQMNNQSFYIETKLDGERMQMHKDGDVYKYFSRNGFDYTQQFGASPLEGSLTPFIH 321
Query: 286 KIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLY 345
+ E N V CILDGEM+ ++ F + G+ +I + D S+ Q C+ FDVL
Sbjct: 322 NVFENN--VQNCILDGEMMAYNPITQTFMQKGNKFDIKRMVDD---SELQTCFCVFDVLM 376
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
+ D + H+ L +R+E+L K+ P GR++ + A+ EV
Sbjct: 377 INDQKLGHEILSKRYEVLNKIFTPIPGRIQVVSKTQ-----------------ANTRKEV 419
Query: 406 EKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSG 464
E I+NR+EGIV+KD S ++P R WLK+KPEY+ D LD+L++GGY+G G
Sbjct: 420 VDALNEAIDNREEGIVVKDPMSAYKPDKRGEGWLKIKPEYVNGLMDELDLLVVGGYWGKG 479
Query: 465 RRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 524
RGG ++ FL A+AE P P P F S CRVG+G + +EL + KL Y++ Y KR
Sbjct: 480 LRGGMMSHFLCAVAETPPPGEKPSVFHSICRVGSGYTMKELYDLGLKLAKYWKPYR--KR 537
Query: 525 APPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYD 584
PP E+P+V+IE P S+I+ I + + S+++ +LRFPRI+++R D
Sbjct: 538 DPPCSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVNSDMYKTECTLRFPRIEKIRED 592
Query: 585 KPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQ 644
K WH+C+ + +L ++G + ++ + D++P++ + + K + HF
Sbjct: 593 KEWHECMTLDLLEQLRGKASG--KLATKHLDISDNEPQEKKRKTVPKVKKKLDLMDHFKA 650
Query: 645 TDVSDIKGETSIFSDMVFCIL 665
D+S + +S+F ++ FC++
Sbjct: 651 PDLSSVSKVSSMFQEVEFCVM 671
>gi|355701094|gb|EHH29115.1| DNA ligase 4 [Macaca mulatta]
gi|380789413|gb|AFE66582.1| DNA ligase 4 [Macaca mulatta]
gi|383410121|gb|AFH28274.1| DNA ligase 4 [Macaca mulatta]
Length = 911
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 238/679 (35%), Positives = 382/679 (56%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQK++ A+K FR+FLD++ D D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKSRGRAEKIRHFREFLDSWRKFHDALHKNQKDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F ++A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHGDAGDFALIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++NDLLD +AS+ + K + L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQQVNDLLDSVASNNSAKRKDLIKKSLLQLITQSSALEQKWLIRMIIKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S+++IF FH DA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 198 VSQQTIFSVFHNDAVELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-IADI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G YFSR+ +++ ++G +++ I
Sbjct: 257 EHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTDQFGASPTEGSLTPFIH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G +I + D SD Q CY FDVL V
Sbjct: 317 NAFKTDIQICILDGEMMAYNPNTQTFMQKGIKFDIKRMVED---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + H++L++R+E+L + P GR+E + AH +EV
Sbjct: 374 NKKLGHETLRKRYEILSSIFTPIPGRIEVVQKTQ-----------------AHTKNEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVTGLMDELDILIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++ + K+AP
Sbjct: 477 GGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWKPFH--KKAP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPRIEKIREDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+C+ + +L ++G Y G DD P++ + + K V + H +
Sbjct: 590 WHECMTLDDLEQLRGKASGKLASKHLYVG-GDDGPQEKKRKAAPKMKKVIGIIEHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
++++ ++IF D+ FC++
Sbjct: 649 LTNVNKISNIFEDVEFCVM 667
>gi|355754801|gb|EHH58702.1| DNA ligase 4 [Macaca fascicularis]
Length = 911
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 238/679 (35%), Positives = 382/679 (56%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQK++ A+K FR+FLD++ D D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKSRGRAEKIRHFREFLDSWRKFHDALHKNQKDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F ++A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHGDAGDFALIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++NDLLD +AS+ + K + L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQQVNDLLDSVASNNSAKRKDLIKKSLLQLITQSSALEQKWLIRMIIKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S+++IF FH DA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 198 VSQQTIFSVFHNDAVELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-IADI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G YFSR+ +++ ++G +++ I
Sbjct: 257 EHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTDQFGASPTEGSLTPFIH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G +I + D SD Q CY FDVL V
Sbjct: 317 NAFKTDIQICILDGEMMAYNPNTQTFMQKGIKFDIKRMVED---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + H++L++R+E+L + P GR+E + AH +EV
Sbjct: 374 NKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQ-----------------AHTKNEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVTGLMDELDILIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++ + K+AP
Sbjct: 477 GGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWKPFH--KKAP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPRIEKIREDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+C+ + +L ++G Y G DD P++ + + K V + H +
Sbjct: 590 WHECMTLDDLEQLRGKASGKLASKHLYVG-GDDGPQEKKRKAAPKMKKVIGIIEHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
++++ ++IF D+ FC++
Sbjct: 649 LTNVNKISNIFEDVEFCVM 667
>gi|301760197|ref|XP_002915906.1| PREDICTED: DNA ligase 4-like [Ailuropoda melanoleuca]
gi|281351498|gb|EFB27082.1| hypothetical protein PANDA_003934 [Ailuropoda melanoleuca]
Length = 911
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 239/679 (35%), Positives = 378/679 (55%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDT---YCDSV---------DYFSALRLILPSLDRE 59
L S IQ+++ A K FR+FLD+ + D++ ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQRSRERAAKIRHFREFLDSWRRFHDALHKNQRDVSDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + + DA++L+N+R G +AG+F +A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPRGGKDALKLLNYRTPTGTRADAGDFATIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++ND+LD +AS+ + K + L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQQVNDILDSIASNNSARRKDLIKKSLLQLISQSSALEQKWLIRMIVKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
SE+S+F FH DA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 198 FSEQSVFSVFHNDAAELHNVTTDLEKVCRQLHDPSIGLSDISITLFSAFKPMLAA-IADI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + IE K DG+R+Q+H+ G YFSR+ +++ ++G +++ I
Sbjct: 257 ERIEKDMKHQSFYIETKLDGERMQMHRQGDVYQYFSRNGYNYTDQFGDSPREGSLTPFIH 316
Query: 290 QNVLVDR--CILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G+ +I + D SD Q CY FDVL V
Sbjct: 317 SAFKTDVQICILDGEMMAFNPNTQTFMQKGNKFDIKRMVED---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + ++LK+RHE+L V P GR+E + AH EV
Sbjct: 374 NKKLGRETLKKRHEILTSVFTPIPGRIEIVQKTQ-----------------AHTQKEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVDGLMDELDILIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE+P P P F + CRVG+G + +EL + KL +++ + K+AP
Sbjct: 477 GGMMSHFLCAVAEKPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFH--KKAP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P S+I+ + + + S+++ A +LRFPRI+R+R DK
Sbjct: 535 PSSILC---GTEKPEVYIE-PCHSVIVQVKA-TEIVSSDMYKAGCTLRFPRIERIREDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+C V +L ++G Y G DD+P++ + + K V + H +
Sbjct: 590 WHECTTVDDLEQLRGKASGKLASKHLYVG-DDDEPQEKKRKAAPKVKKVIGIIEHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
+S++ +IF D+ FC++
Sbjct: 649 LSNVNKVCNIFEDVEFCVM 667
>gi|326913894|ref|XP_003203267.1| PREDICTED: DNA ligase 4-like [Meleagris gallopavo]
Length = 912
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 241/680 (35%), Positives = 380/680 (55%), Gaps = 57/680 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQK K +K F+ FLD++ D D ++ A+RLILP L+RE
Sbjct: 24 LCSTLERIQKCKSRPEKTKYFKDFLDSWRKFHSALHQKEKDVTDSFYPAMRLILPQLERE 83
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + KD DAV+L+N+R G+ +AG+F M+A VL+ R
Sbjct: 84 RMAYGIKETMLAKLYIELLNLPKDGKDAVKLLNYRTPTGSRGDAGDFAMIAYFVLKPRSP 143
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
G LT++++N+LLD +A++ K V L LI ++ A E KW+I +I+KDLKLG
Sbjct: 144 K-RGRLTVEQVNELLDAIANNNAAKNKGLVKKSLLQLITQSTALEQKWLIRMIIKDLKLG 202
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S+++IF FHPDA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 203 VSQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPSVSLSDVSIMLFSAFKPMLAA-IADV 261
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
++++ + IE K DG+R+Q+HK+G YFSR+ D++ ++G +++ I
Sbjct: 262 QQIEKQMNNQVFYIETKLDGERMQMHKDGDVYKYFSRNGFDYTQQFGASPLDGSLTPFI- 320
Query: 290 QNVL---VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYV 346
NV + CILDGEM+ ++ F + G+ +I + D SD Q C+ FDVL +
Sbjct: 321 HNVFKNDIQNCILDGEMMAYNPETQTFMQKGNKFDIKRMVED---SDLQTCFCVFDVLMI 377
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
D + H+SL +R+++L V P GR+ + H ++ R EV
Sbjct: 378 NDQKLGHESLSKRYKILNNVFTPVTGRIHVV---HKKSARTR--------------KEVI 420
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGR 465
E I+NR+EGI++KD S ++P R WLK+KPEY+ D LD+LI+GGY+G G
Sbjct: 421 DALNEAIDNREEGIMIKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGS 480
Query: 466 RGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA 525
RGG ++ FL A+AE PAP+ P F S CRVG+G + +EL + KL +++ Y ++
Sbjct: 481 RGGMMSHFLCAIAETPAPNEKPTAFHSICRVGSGYTMKELYDLGLKLAKHWKPYN--RKD 538
Query: 526 PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
PP E+P+++IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 539 PPCNILC---GTEKPEMYIE-PCNSVIVQIKA-AEIVDSDMYKTDCTLRFPRIEKIREDK 593
Query: 586 PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQT 645
W++C+ + L + G Y D+ ++ R + KK + I F
Sbjct: 594 EWYECMTLDMLEHLRSRAEGKLASKHLYIDEYDEPQEKKRRTVPKVKKVIGIA-EQFKAP 652
Query: 646 DVSDIKGETSIFSDMVFCIL 665
D+S++ +S+F D+ FC++
Sbjct: 653 DLSNVNKVSSVFEDVEFCVM 672
>gi|344284665|ref|XP_003414085.1| PREDICTED: DNA ligase 4-like [Loxodonta africana]
Length = 916
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 240/686 (34%), Positives = 385/686 (56%), Gaps = 67/686 (9%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQ+++ A+K F++FLD++ D D ++ A+RLILP L+RE
Sbjct: 22 LCSTLERIQRSRGRAEKIKHFQEFLDSWRKFHDALHKNQKDVTDSFYPAMRLILPQLERE 81
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + ++ DA++L+N+R G + G+F M+A VL+ R
Sbjct: 82 RMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTRGDTGDFAMIAYFVLKPR-C 140
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISVLSTL---IKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++ND+LD +AS+ + +K V +L I +++A E KW+I +ILKDLKLG
Sbjct: 141 LQKGSLTIQQVNDILDSVASNNSAKKKNLVKKSLLQFIAQSSALEQKWLIRMILKDLKLG 200
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S++ +F FH DA +L++VT D++ VC +L D + I + A RP LA I D
Sbjct: 201 VSQQVVFSLFHDDAAELYSVTTDMEKVCRQLHDPSVGLSDISITLFSAFRPMLAA-IADI 259
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRS-------FLDHSEYG------H 282
R + + IE K DG+R+Q+H++G +FSR+ F D S+ G H
Sbjct: 260 RHVERDMKHQSFYIETKLDGERMQMHRDGDVYKFFSRNGYDYTDQFGDSSQQGSLTPFIH 319
Query: 283 AMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFD 342
+ QN CILDGEM+ +D + F + G+ +I + D SD Q CY FD
Sbjct: 320 GAFQTNTQN-----CILDGEMMAYDPNTQSFMQKGNKFDIKRMVED---SDLQTCYCVFD 371
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
VL V + + H++L++R+E+L + P GR+E + AH
Sbjct: 372 VLMVNNKKLGHETLRKRYEILSGIFTPIPGRIEIVQKTQ-----------------AHTK 414
Query: 403 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYY 461
EV E I+ R+EGI++K S ++PG R WLK+KPEY+ D LD+LI+GGY+
Sbjct: 415 KEVIDALNEAIDKREEGIMIKYPLSIYKPGKRGEGWLKIKPEYVNGLMDELDILIVGGYW 474
Query: 462 GSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 521
G G RGG ++ FL A+AE+P P F + CRVG+G + +EL + KL +++ +
Sbjct: 475 GKGLRGGMMSHFLCAVAEKPPTGEKPSVFHTVCRVGSGYTMKELYDLGLKLANHWKPFN- 533
Query: 522 PKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 581
++APPS E+P+V+IE P S+I+ I + + S+++ +LRFPRI+++
Sbjct: 534 -RKAPPSSILC---GTEKPEVYIE-PCSSVIVQIKA-AEIVPSDMYKTDCTLRFPRIEKI 587
Query: 582 RYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKP--KQFRSSRKGEKKNVSIVP 639
R DK WH+C+ + +L ++G + DD+P K+ +++ KK V I+
Sbjct: 588 REDKEWHECMTLDELEQLRGKASGKLASRHLHVDDDDDEPQEKKRKAAVPKLKKAVGII- 646
Query: 640 SHFLQTDVSDIKGETSIFSDMVFCIL 665
HF ++S+I ++IF D+ FC++
Sbjct: 647 EHFKAPNLSNINKVSNIFEDVEFCVM 672
>gi|402902442|ref|XP_003914111.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 4 [Papio anubis]
Length = 910
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 236/679 (34%), Positives = 381/679 (56%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQK++ A+K FR+FLD++ D D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKSRGRAEKIRHFREFLDSWRKFHDALHKNQKDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F ++A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHGDAGDFALIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++NDLLD +AS+ + K + L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQQVNDLLDSVASNNSAKRKDLIKKSLLQLITQSSALEQKWLIRMIIKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S+++I FH DA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 198 VSQQTILSVFHNDAVELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-IADI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G YFSR+ +++ ++G +++ I
Sbjct: 257 EHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTDQFGASPTEGSLTPFIH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G +I + D SD Q CY FDVL V
Sbjct: 317 NAFKTDIQICILDGEMMAYNPNTQTFMQKGIKFDIKRMVED---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + H++L++R+E+L + P GR+E + AH +EV
Sbjct: 374 NKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQ-----------------AHTKNEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVTGLMDELDILIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++ + K+AP
Sbjct: 477 GGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWKPFH--KKAP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPRIEKIREDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+C+ + +L ++G + G DD P++ + + K V + H +
Sbjct: 590 WHECMTLDDLEQLRGKASGKLASKHLFVG-GDDGPQEKKRKAAPKMKKVIGIIEHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
++++ ++IF D+ FC++
Sbjct: 649 LTNVNKISNIFEDVEFCVM 667
>gi|410947682|ref|XP_003980572.1| PREDICTED: DNA ligase 4 [Felis catus]
Length = 911
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 237/679 (34%), Positives = 379/679 (55%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDT---YCDSV---------DYFSALRLILPSLDRE 59
L S IQK+K A+K FR+FLD+ + D++ ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKSKGRAEKIRHFREFLDSWRRFHDALHKNQKDVRDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + ++ DA++L+N+R G +AG+F +A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTRGDAGDFATIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LT++++NDLLD +AS+ + K + L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTVQQVNDLLDSIASNNSARRKDLIKKSLLQLISQSSALEQKWLIRMIVKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
SE+S+F FH DA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 198 FSEQSVFSAFHNDAAELHNVTTDLEKVCRQLHDPSIGLTDISITLFSAFKPMLAA-IADI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G YFSR+ +++ ++G +++ I
Sbjct: 257 ERIEKDMKHQSFYIETKLDGERMQMHKDGDVYQYFSRNGFNYTDQFGDSPREGSLTPFIH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G+ +I + D SD Q CY FDVL V
Sbjct: 317 SAFKTDVQTCILDGEMMAFNPNTQTFMQKGNKFDIKRMVED---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + ++LK+R+++L V P GR++ + AH EV
Sbjct: 374 NKKLGRETLKKRYDILTSVFTPIPGRIDIVQKTQ-----------------AHTKKEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD LI+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVDGLMDELDTLIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE+P P P F + CRVG+G + +EL + KL +++ + K+AP
Sbjct: 477 GGMMSHFLCAVAEKPPPGEKPSMFHTLCRVGSGYTMKELYDLGLKLAKHWKPFH--KKAP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P S+I+ I + + SE++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GTEKPEVYIE-PCHSVIVQIKA-TEIVPSEMYKTGCTLRFPRIEKIREDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
W++C + +L ++G Y G DD+P++ R K V + H +
Sbjct: 590 WYECTTLDDLEQLRGKASGKLASKHLYVG-GDDEPQEKRRKAAPRIKKVVGIIEHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
+S++ +++F D+ FC++
Sbjct: 649 LSNVNKVSNVFEDVEFCVM 667
>gi|348506808|ref|XP_003440949.1| PREDICTED: DNA ligase 4 [Oreochromis niloticus]
Length = 910
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 226/636 (35%), Positives = 364/636 (57%), Gaps = 48/636 (7%)
Query: 45 YFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPN-AG 103
++ A+RLI+P +RER +YG+KES+LA ID LG+ K+ +A +L+N+R + AG
Sbjct: 69 FYPAMRLIVPPFERERMAYGIKESMLAKLYIDVLGLPKNGPEANKLLNYRAPTTSQGEAG 128
Query: 104 NFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQE 160
+F +A VL++R G L+IKE+ND LD +A+S +K V L LI +++A E
Sbjct: 129 DFAGMAYFVLKKR-CTSQGNLSIKEVNDFLDSVATSNATKQKDLVKKSLLHLITQSSALE 187
Query: 161 MKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEV 220
KW+I +ILKD+KLGIS++++ FHPDA +L+NV DL VC++L + I +
Sbjct: 188 QKWLIRMILKDMKLGISKETVLQVFHPDAAELYNVNTDLNKVCQQLHNPAVSLSEVSIGL 247
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-E 279
A +P LA + + +++ IE K DG+RIQ+HK+G YFSR+ +++ +
Sbjct: 248 FSAFKPMLAA-VANIRNVEKQMGNSTFYIETKLDGERIQLHKDGDVYKYFSRNAFEYTQQ 306
Query: 280 YGHA---------MSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGL 330
+G + + + + NV+ CILDGEM+ ++ + + F + GS +I + D
Sbjct: 307 FGGSPLEGSLTPYIHHVFKSNVV--NCILDGEMMAYNPAADTFMQKGSKFDIKRLMDD-- 362
Query: 331 SSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQ 390
S+ Q C+ FDVL + D + ++LK+RHELLQ V P KGRL H+ P+
Sbjct: 363 -SELQTCFCVFDVLLINDQKLGKETLKKRHELLQTVFTPVKGRL-----------HLVPK 410
Query: 391 GEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS 450
E A + EV + I++R+EGI++KD S ++P R WLK+KPEY+
Sbjct: 411 AE------ARTMQEVVNALNDAIDSREEGIMVKDPLSIYKPDKRGESWLKIKPEYVDGLM 464
Query: 451 D-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV 509
D LD+LI+GGY+G GRRGG ++ FL A+AE P P P F + CR+G+G + +EL +
Sbjct: 465 DELDLLIVGGYWGKGRRGGMMSHFLCAVAEAPKPGEKPSVFHTLCRIGSGYTMKELYDLG 524
Query: 510 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA 569
KL +++ Y K PP+ E+P+V+IE P S+I+ + + + S+++
Sbjct: 525 LKLTKHWKVYR--KNNPPASILC---GTEKPEVYIE-PCNSVIIQVKA-AEIVGSDMYKT 577
Query: 570 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 629
+LRFPRI+++R DK WH C+ + + ++G + + + + +P++ +
Sbjct: 578 NCTLRFPRIEKIRDDKEWHQCMTLAELDQFRSKASG--KLASRHLHIDNGEPQKKKRKLP 635
Query: 630 GEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ K V + HF D+S + ET +F D+ FCIL
Sbjct: 636 VKPKKVIGIIDHFKPQDLSGVTKETDMFEDVEFCIL 671
>gi|71895189|ref|NP_001025987.1| DNA ligase 4 [Gallus gallus]
gi|88911289|sp|Q90YB1.2|DNLI4_CHICK RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|53130782|emb|CAG31720.1| hypothetical protein RCJMB04_10b2 [Gallus gallus]
Length = 912
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 240/680 (35%), Positives = 379/680 (55%), Gaps = 57/680 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQ K +K F+ FLD++ D D ++ A+RLILP L+RE
Sbjct: 24 LCSTLERIQTCKSRPEKTKYFKDFLDSWRKFHSALHQKEKDVTDSFYPAMRLILPQLERE 83
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + KD DAV+L+N+R G+ +AG+F M+A VL+ R
Sbjct: 84 RMAYGIKETMLAKLYIELLNLPKDGKDAVKLLNYRTPTGSRGDAGDFAMIAYFVLKPRSP 143
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
G LT++++N+LLD +A++ K V L LI ++ A E KW+I +I+KDLKLG
Sbjct: 144 K-RGRLTVEQVNELLDAIANNNAAKNKGLVKKSLLQLITQSTALEQKWLIRMIIKDLKLG 202
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S+++IF FHPDA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 203 VSQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPSVSLSDVSIMLFSAFKPMLAA-IADV 261
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
++++ + IE K DG+R+Q+HK+G YFSR+ D++ ++G +++ I
Sbjct: 262 QQIEKQMNNQVFYIETKLDGERMQMHKDGDVYKYFSRNGFDYTQQFGASPVDGSLTPFI- 320
Query: 290 QNVL---VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYV 346
NV + CILDGEM+ ++ F + G+ +I + D SD Q C+ FDVL +
Sbjct: 321 HNVFKSDIQNCILDGEMMAYNPETQTFMQKGNKFDIKRMVED---SDLQTCFCVFDVLMI 377
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
D + H+SL +R+++L V P GR+ + H ++ R EV
Sbjct: 378 NDQKLAHESLSKRYKILSNVFTPLTGRIHVV---HKKSARTR--------------KEVI 420
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGR 465
E I+NR+EGI++KD S ++P R WLK+KPEY+ D LD+LI+GGY+G G
Sbjct: 421 DALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGS 480
Query: 466 RGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA 525
RGG ++ FL A+AE PAP+ P F S CRVG+G + +EL + KL +++ Y ++
Sbjct: 481 RGGMMSHFLCAVAETPAPNEKPTVFHSICRVGSGYTMKELYDLGLKLAKHWKPYN--RKD 538
Query: 526 PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
PP E+P+++IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 539 PPCNILC---GTEKPEMYIE-PCNSVIVQIKA-AEIVNSDMYKTDCTLRFPRIEKIREDK 593
Query: 586 PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQT 645
W++C+ + L + G Y D+ ++ R + KK + I F
Sbjct: 594 EWYECMTLDMLEHLRSRAEGKLASKHLYIDEYDEPQEKKRRTVPKVKKVIGIA-EQFKAP 652
Query: 646 DVSDIKGETSIFSDMVFCIL 665
D+S++ +S+F D+ FC++
Sbjct: 653 DLSNVNKVSSMFEDVEFCVM 672
>gi|15778121|dbj|BAB68506.1| DNA ligase IV [Gallus gallus]
Length = 912
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 240/680 (35%), Positives = 379/680 (55%), Gaps = 57/680 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQ K +K F+ FLD++ D D ++ A+RLILP L+RE
Sbjct: 24 LCSTLERIQTCKSRPEKTKYFKDFLDSWRKFHSALHQKEKDVTDSFYPAMRLILPQLERE 83
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + KD DAV+L+N+R G+ +AG+F M+A VL+ R
Sbjct: 84 RMAYGIKETMLAKLYIELLNLPKDGKDAVKLLNYRTPTGSRGDAGDFAMIAYFVLKPRSP 143
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
G LT++++N+LLD +A++ K V L LI ++ A E KW+I +I+KDLKLG
Sbjct: 144 K-RGRLTVEQVNELLDAIANNNAAKNKGLVKKSLLQLITQSTALEQKWLIRMIIKDLKLG 202
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S+++IF FHPDA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 203 VSQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPSVSLSDVSIMLFSAFKPMLAA-IADV 261
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
++++ + IE K DG+R+Q+HK+G YFSR+ D++ ++G +++ I
Sbjct: 262 QQIEKQMNNQVFYIETKLDGERMQMHKDGDVYKYFSRNGFDYTQQFGASPVDGSLTPFI- 320
Query: 290 QNVL---VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYV 346
NV + CILDGEM+ ++ F + G+ +I + D SD Q C+ FDVL +
Sbjct: 321 HNVFKSDIQNCILDGEMMAYNPETQTFMQKGNKFDIKRMVED---SDLQTCFCVFDVLMI 377
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
D + H+SL +R+++L V P GR+ + H ++ R EV
Sbjct: 378 NDQKLAHESLSKRYKILSNVFTPLTGRIHVV---HKKSARTR--------------KEVI 420
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGR 465
E I+NR+EGI++KD S ++P R WLK+KPEY+ D LD+LI+GGY+G G
Sbjct: 421 DALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGS 480
Query: 466 RGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA 525
RGG ++ FL A+AE PAP+ P F S CRVG+G + +EL + KL +++ Y ++
Sbjct: 481 RGGMMSHFLCAIAETPAPNEKPTVFHSICRVGSGYTMKELYDLGLKLAKHWKPYN--RKD 538
Query: 526 PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
PP E+P+++IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 539 PPCNILC---GTEKPEMYIE-PCNSVIVQIKA-AEIVNSDMYKTDCTLRFPRIEKIREDK 593
Query: 586 PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQT 645
W++C+ + L + G Y D+ ++ R + KK + I F
Sbjct: 594 EWYECMTLDMLEHLRSRAEGKLASKHLYIDEYDEPQEKKRRTVPKVKKVIGIA-EQFKAP 652
Query: 646 DVSDIKGETSIFSDMVFCIL 665
D+S++ +S+F D+ FC++
Sbjct: 653 DLSNVNKVSSMFEDVEFCVM 672
>gi|432849667|ref|XP_004066615.1| PREDICTED: DNA ligase 4-like [Oryzias latipes]
Length = 912
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 238/639 (37%), Positives = 369/639 (57%), Gaps = 51/639 (7%)
Query: 45 YFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPN-AG 103
++ A+RLI+P +RER +YG+KES+LA ID LG+ K+ +A +L+N+R + AG
Sbjct: 70 FYPAMRLIVPPFERERMAYGIKESMLAKLYIDVLGLPKNGPEANKLLNYRAPTTSQGEAG 129
Query: 104 NFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLA---SSENRAEKISVLSTLIKKTNAQE 160
+F +A VL++R G L+IKE+ND LD +A +S+ + L LI +++A E
Sbjct: 130 DFAGMAYFVLKKR-CTSQGNLSIKEVNDFLDSVALNNASKKKDLMRKSLLHLITQSSALE 188
Query: 161 MKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEV 220
KW+I +ILKD+KLGIS++++ FHPDA +L+NV DL VC++L N D+ +
Sbjct: 189 QKWLIRMILKDMKLGISKETVLQAFHPDAAELYNVNTDLNKVCQQL--HNPSVSLSDVSI 246
Query: 221 G--KAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS 278
G A +P LA + + +++ IE K DG+RIQ+HK+G YFSR+ +++
Sbjct: 247 GLFSAFKPMLAA-VANIRNVEKQMGNSPFYIETKLDGERIQLHKDGDVYKYFSRNAFEYT 305
Query: 279 -EYG-----HAMSKIIEQNVL---VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
++G +++ I NV V CILDGEM+ ++ + F + GS +I K D
Sbjct: 306 QQFGGSPLEGSLTPYI-HNVFKSHVANCILDGEMMAYNPTTETFMQKGSRFDIKKLMDD- 363
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
S+ Q C+ FDVL V D + ++L++RHE+LQ V P+KGR+ H+ P
Sbjct: 364 --SELQTCFCVFDVLLVNDQKLGKEALRKRHEILQTVFTPAKGRM-----------HLVP 410
Query: 390 QGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAG 449
+ E A +V EV + I++R+EGI++KD S ++P R WLK+KPEY+ +
Sbjct: 411 KSE------ARSVQEVVSALNDAIDSREEGIMVKDPLSIYKPDKRGEGWLKIKPEYVDSL 464
Query: 450 SD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAV 508
D LD+LI+GGY+G GRRGG ++ FL A+AE P P P F S CR+G+G + +EL +
Sbjct: 465 MDELDLLIVGGYWGKGRRGGMMSHFLCAVAEAPKPGEKPSVFHSLCRIGSGYTMKELYDL 524
Query: 509 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS 568
KL +++ Y PPS S E+P+V+IE P SII+ + + I S+++
Sbjct: 525 GLKLAKHWKVYRR-SDPPPSLL----CSTEKPEVYIE-PCNSIIVQVKA-AEIIPSDMYR 577
Query: 569 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSR 628
+LRFPRI+++R DK WH C+ + +L ++G DD+P++ + +
Sbjct: 578 TNCTLRFPRIEKIRDDKEWHQCMTLAELDQLRSKASGKLASRHLRIDDGDDQPQKKKKRK 637
Query: 629 --KGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
KK VSI+ HF D+S + ET +F D+ FCIL
Sbjct: 638 LPTKAKKAVSIL-DHFKPQDLSAVSKETDMFEDVEFCIL 675
>gi|449277604|gb|EMC85707.1| DNA ligase 4 [Columba livia]
Length = 912
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 236/680 (34%), Positives = 378/680 (55%), Gaps = 57/680 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQK K K F+ FLD++ D D ++ A+RLILP L+RE
Sbjct: 24 LCSTLERIQKCKSRPDKTKYFKDFLDSWRKFHDALHQKEKDVTDSFYPAMRLILPQLERE 83
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + +D DA +L+N+R G+ +AG+F M+A VL+ R
Sbjct: 84 RMAYGIKETMLAKLYIELLNLPRDGKDAAKLLNYRTPAGSRGDAGDFAMIAYFVLKPRSP 143
Query: 119 MISGGLTIKELNDLLDRLA---SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLG 175
G LTI+++N+ LD +A +++N+ L LI ++ A E KW+I +I+KDLKLG
Sbjct: 144 K-QGRLTIEQVNEHLDTIANNNAAKNKGLLKKSLLQLITQSTALEQKWLIRMIIKDLKLG 202
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
IS+++IF FHPDA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 203 ISQQTIFSIFHPDALELHNVTTDLEKVCRQLHDPSVSLSDVSITLFSAFKPMLAA-IADV 261
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
++++ + IE K DG+R+Q+HK+G YFSR+ D++ ++G +++ I
Sbjct: 262 QQIEKQMNNQIFYIETKLDGERMQLHKDGDVYKYFSRNGFDYTQQFGASPLDGSLTPFI- 320
Query: 290 QNVL---VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYV 346
NV + CILDGEM+ ++ F + G+ +I + D SD Q C+ FDVL V
Sbjct: 321 HNVFKSNIQNCILDGEMMAYNPETQTFMQKGNRFDIKRMVED---SDLQTCFCVFDVLMV 377
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
D + H+ L +R+E+L V P GR+ + H ++ R EV
Sbjct: 378 NDQKLAHEILTKRYEILSSVFTPLAGRIHVV---HKKSARTR--------------KEVI 420
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGR 465
E I+NR+EGI++KD S ++P R WLK+KPEY+ D LD+LI+GGY+G G
Sbjct: 421 DALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGS 480
Query: 466 RGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA 525
RGG ++ FL A+AE P P+ P F S CRVG+G + +EL + KL +++ Y +R
Sbjct: 481 RGGMMSHFLCAIAETPPPNEKPTIFHSICRVGSGYTMKELYDLGLKLAKHWKPYH--RRD 538
Query: 526 PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
PP E+P+++IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 539 PPGNILC---GTEKPEMYIE-PCNSVIVQIKA-AEIVNSDMYKTDCTLRFPRIEKIREDK 593
Query: 586 PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQT 645
W++C+ + +E + S K + D+P++ + + + + + F
Sbjct: 594 EWYECM-TSTMLEDLRSKAEGKLASKHLHIEEYDEPQEKKRKTVSKVRKIIGIAEQFKAP 652
Query: 646 DVSDIKGETSIFSDMVFCIL 665
D+S++ +++F D+ FC++
Sbjct: 653 DLSNVSKVSNMFEDVEFCVM 672
>gi|26326007|dbj|BAC26747.1| unnamed protein product [Mus musculus]
Length = 911
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 236/679 (34%), Positives = 381/679 (56%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQK K A+K F++FLD++ D D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKGKDRAEKIRHFKEFLDSWRKFHDALHKNRKDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + ++ DA +L+N+R GA +AG+F M+A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPREGKDAQKLLNYRTPSGARTDAGDFAMIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++N+LLD +AS+ + +K V L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQQVNELLDLVASNNSGKKKDLVKKSLLQLITQSSALEQKWLIRMIIKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
IS+++IF FH DA +L NVT DL+ VC +L D + I + A +P LA + D
Sbjct: 198 ISQQTIFSIFHNDAVELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-VADV 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + + IE K DG+R+Q+HK+G+ YFSR+ +++ ++G +++ I
Sbjct: 257 ERVEKDMKQQSLYIETKLDGERMQMHKDGALYRYFSRNGYNYTDQFGESPQEGSLTPFIH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G +I + D S Q CY FDVL V
Sbjct: 317 NAFGTDVQACILDGEMMAYNPTTQTFMQKGVKFDIKRMVED---SGLQTCYSVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ ++L++R+E+L P +GR+E + AH EV
Sbjct: 374 KKKLGRETLRKRYEILSSTFTPIQGRIEIVQKTQ-----------------AHTKKEVVD 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
+ I+ R+EGI++K S ++P R WLK+KPEY+ D LDVLI+GGY+G G R
Sbjct: 417 ALNDAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDVLIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE P P P F + CRVG+G + +EL + KL Y++ + K++P
Sbjct: 477 GGMMSHFLCAVAETPPPGDRPSVFHTLCRVGSGYTMKELYDLGLKLAKYWKPFH--KKSP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P+ S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GTEKPEVYIE-PQNSVIVQIKA-AEIVPSDMYKTGSTLRFPRIEKIRDDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+C+ + +L ++G + G DD+P++ R + K + H +
Sbjct: 590 WHECMTLGDLEQLRGKASGKLATKHLHVG-DDDEPREKRRKPISKTKKAIRIIEHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
+S++ +++F D+ FC++
Sbjct: 649 LSNVNKVSNVFEDVEFCVM 667
>gi|84794637|ref|NP_795927.2| DNA ligase 4 [Mus musculus]
gi|408360059|sp|Q8BTF7.2|DNLI4_MOUSE RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|146327388|gb|AAI41418.1| Ligase IV, DNA, ATP-dependent [synthetic construct]
gi|148690091|gb|EDL22038.1| ligase IV, DNA, ATP-dependent, isoform CRA_a [Mus musculus]
gi|148690093|gb|EDL22040.1| ligase IV, DNA, ATP-dependent, isoform CRA_a [Mus musculus]
Length = 911
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 236/679 (34%), Positives = 380/679 (55%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQK K A+K F++FLD++ D D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKGKDRAEKIRHFKEFLDSWRKFHDALHKNRKDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + ++ DA +L+N+R GA +AG+F M+A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPREGKDAQKLLNYRTPSGARTDAGDFAMIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++N+LLD +AS+ + +K V L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQQVNELLDLVASNNSGKKKDLVKKSLLQLITQSSALEQKWLIRMIIKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
IS+++IF FH DA +L NVT DL+ VC +L D + I + A +P LA + D
Sbjct: 198 ISQQTIFSIFHNDAVELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-VADV 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G+ YFSR+ +++ ++G +++ I
Sbjct: 257 ERVEKDMKQQSFYIETKLDGERMQMHKDGALYRYFSRNGYNYTDQFGESPQEGSLTPFIH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G +I + D S Q CY FDVL V
Sbjct: 317 NAFGTDVQACILDGEMMAYNPTTQTFMQKGVKFDIKRMVED---SGLQTCYSVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ ++L++R+E+L P +GR+E + AH EV
Sbjct: 374 KKKLGRETLRKRYEILSSTFTPIQGRIEIVQKTQ-----------------AHTKKEVVD 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
+ I+ R+EGI++K S ++P R WLK+KPEY+ D LDVLI+GGY+G G R
Sbjct: 417 ALNDAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDVLIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE P P P F + CRVG+G + +EL + KL Y++ + K++P
Sbjct: 477 GGMMSHFLCAVAETPPPGDRPSVFHTLCRVGSGYTMKELYDLGLKLAKYWKPFH--KKSP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P+ S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GTEKPEVYIE-PQNSVIVQIKA-AEIVPSDMYKTGSTLRFPRIEKIRDDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+C+ + +L ++G + G DD+P++ R + K + H +
Sbjct: 590 WHECMTLGDLEQLRGKASGKLATKHLHVG-DDDEPREKRRKPISKTKKAIRIIEHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
+S++ +++F D+ FC++
Sbjct: 649 LSNVNKVSNVFEDVEFCVM 667
>gi|74195197|dbj|BAE28333.1| unnamed protein product [Mus musculus]
Length = 911
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 236/679 (34%), Positives = 380/679 (55%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQK K A+K F++FLD++ D D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKGKDRAEKIRHFKEFLDSWRKFHDALHKNRKDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + ++ DA +L+N+R GA +AG+F M+A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPREGKDAQKLLNYRTPSGARTDAGDFAMIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++N+LLD +AS+ + +K V L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQQVNELLDLVASNNSGKKKDLVKKSLLQLITQSSALEQKWLIRMIIKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
IS+++IF FH DA +L NVT DL+ VC +L D + I + A +P LA + D
Sbjct: 198 ISQQTIFSIFHNDAVELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-VADV 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G+ YFSR+ +++ ++G +++ I
Sbjct: 257 ERVEKDMKQQSFYIETKLDGERMQMHKDGALYRYFSRNGYNYTDQFGESPQEGSLTPFIH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G +I + D S Q CY FDVL V
Sbjct: 317 NAFGTDVQACILDGEMMAYNPTTQTFMQKGVKFDIKRMVED---SGLQTCYSVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ ++L++R+E+L P +GR+E + AH EV
Sbjct: 374 KKKLGRETLRKRYEILSSTFTPIQGRIEIVQKTQ-----------------AHTKKEVVD 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
+ I+ R+EGI++K S ++P R WLK+KPEY+ D LDVLI+GGY+G G R
Sbjct: 417 ALNDAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDVLIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE P P P F + CRVG+G + +EL + KL Y++ + K++P
Sbjct: 477 GGMMSHFLCAVAETPPPGDRPSVFHTLCRVGSGYTMKELYDLGLKLAKYWKPFH--KKSP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P+ S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GTEKPEVYIE-PQNSVIVQIKA-AEIVPSDMYKTGSTLRFPRIEKIRDDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+C+ + +L ++G + G DD+P++ R + K + H +
Sbjct: 590 WHECMTLGDLEQLRGKASGKLATKHLHVG-DDDEPREKRRKPISKTKKAIRIIEHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
+S++ +++F D+ FC++
Sbjct: 649 LSNVNKVSNVFEDVEFCVM 667
>gi|395527303|ref|XP_003765789.1| PREDICTED: DNA ligase 4 [Sarcophilus harrisii]
Length = 911
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 237/679 (34%), Positives = 381/679 (56%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDT---YCDSV---------DYFSALRLILPSLDRE 59
L S IQK+K K F++FLD+ + D++ ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKSKSRPDKIKYFKEFLDSWRKFHDAIHKNEKEVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++ A I+ L + K+ DA +L+N+R G +AG+F M+A VL+ R
Sbjct: 79 RMAYGIKETMFAKLYIELLNLPKEGKDAQKLLNYRTPTGTRGDAGDFAMIAYFVLKPRCP 138
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
G LTI+++ND+LD +ASS++ K V L LI +++A E KW+I +I+KDLKLG
Sbjct: 139 Q-QGSLTIQQVNDVLDLIASSKSANRKDLVKKNLLQLITQSSALEQKWLIRMIIKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S+ +IF FH DA +L NVT DL+ VC +L D + I + A +P LA + D
Sbjct: 198 VSQHTIFSLFHRDAAELHNVTTDLEKVCRELHDPSVGLSDISITLFSAFKPMLAA-VADI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G +FSR+ D++E +G +++ I
Sbjct: 257 QRIEKDMKHQSFYIETKLDGERMQMHKDGDVYKFFSRNGYDYTEQFGDSSLQGSLTPFIH 316
Query: 290 Q--NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
+ + CILDGEM+ ++ + F + G+ +I K D S+ Q CY FDVL V
Sbjct: 317 NAFKMNIQNCILDGEMMAYNPNTQIFMQKGNKFDIKKMVED---SELQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + H++L++R+E++ V P KGRLE + A+ EV
Sbjct: 374 NKKLGHETLRKRYEIIDSVFTPIKGRLEVVQKTE-----------------ANTKKEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ +EGIV+K+ S ++P R WLK+KPEYI D LD+LI+GGY+G G R
Sbjct: 417 ALNEAIDKCEEGIVIKNPLSIYKPDKRGEGWLKIKPEYINKLMDELDILIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE P P P F + CRVG+G + +EL + KL +++ + KR P
Sbjct: 477 GGMMSHFLCAVAETPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLSKHWKPFH--KRTP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
P+ KE+P+V+IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 535 PNSILC---GKEKPEVYIE-PCNSVIVQIKA-AEIVSSDMYKTDCTLRFPRIEKIREDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
W++C+ + L ++G + D++P++ + KK ++I+ H D
Sbjct: 590 WYECMTLSELENLRGKASGKLATKHLFIAGDDEEPQEKKRKAVKVKKAITII-EHLKAPD 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
+S+I +++F D+ FC++
Sbjct: 649 LSNINKISNVFEDVEFCVM 667
>gi|126337295|ref|XP_001365353.1| PREDICTED: DNA ligase 4 [Monodelphis domestica]
Length = 911
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 239/681 (35%), Positives = 381/681 (55%), Gaps = 59/681 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDT---YCDSV---------DYFSALRLILPSLDRE 59
L S IQK+K +K F++FLD+ + D++ ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKSKARPEKIKYFKEFLDSWRRFHDALHKKEKEVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + K+ DA +L+N+R G +AG+F M+A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPKEGKDAQKLLNYRTPTGTRGDAGDFAMIAYFVLKPRCP 138
Query: 119 MISGGLTIKELNDLLDRLAS--SENRAEKISV-LSTLIKKTNAQEMKWIIMIILKDLKLG 175
G LTI+++ND+LD +AS S NR + + L LI +++A E KW+I +I+KDLKLG
Sbjct: 139 K-QGSLTIQQVNDILDLIASNNSANRKDLVKKNLLQLITQSSALEQKWLIRMIIKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
S+++IF FH DA +L NVT DL+ VC +L + I + A +P LA + D
Sbjct: 198 FSQQTIFSLFHRDAAELHNVTTDLEKVCRQLHNPLVGLSDISITLFSAFKPMLAA-VADI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGHA---------MS 285
+ + + IE K DG+R+Q+HK+G +FSR+ D++E +G + +
Sbjct: 257 QRIEKDMKHQGFYIETKLDGERMQMHKDGDVYKFFSRNGYDYTEQFGDSSLNGSLIPFIH 316
Query: 286 KIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLY 345
K + N + CILDGEM+ ++ + F + GS +I + D SD Q CY FDVL
Sbjct: 317 KAFKTN--IQNCILDGEMMAYNPNTQTFMQKGSKFDIKRMVED---SDLQTCYCVFDVLM 371
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
V + + H++L++R+E++ V P KGRLE + A+ EV
Sbjct: 372 VNNKKLGHEALRKRYEIISTVFTPIKGRLEVVQKTE-----------------ANTKKEV 414
Query: 406 EKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSG 464
E I+ R+EGI++K+ S ++P R WLK+KPEYI D LD+LI+GGY+G G
Sbjct: 415 IDALNEAIDKREEGIMIKNPLSIYKPDKRGEGWLKIKPEYINELMDELDILIVGGYWGKG 474
Query: 465 RRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 524
RGG ++ FL A+AE P P P F + CRVG+G + +EL + KL +++ + KR
Sbjct: 475 LRGGMMSHFLCAVAETPPPGEKPSVFYTLCRVGSGYTMKELYDLGLKLSKHWKPFH--KR 532
Query: 525 APPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYD 584
APP+ E+P+V+IE P S+I+ + + + S+++ +LRFPRI+++R D
Sbjct: 533 APPNSILC---GTEKPEVYIE-PCNSVIVQVKA-AEIVSSDMYKTNCTLRFPRIEKIRED 587
Query: 585 KPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQ 644
K W+ C+ + L ++G + G D++P+ + KK + I+ H
Sbjct: 588 KEWYKCMTLDELENLRGKASGKLASKHLFIGGDDEEPQGKKRKAIKVKKTIGII-EHLKA 646
Query: 645 TDVSDIKGETSIFSDMVFCIL 665
D+S+I +++F D+ FC++
Sbjct: 647 PDLSNINRISNVFEDVEFCVM 667
>gi|410906057|ref|XP_003966508.1| PREDICTED: DNA ligase 4-like [Takifugu rubripes]
Length = 908
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 233/653 (35%), Positives = 368/653 (56%), Gaps = 54/653 (8%)
Query: 31 KFRKFLDTYCDSVD-YFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVR 89
KF L + D ++ A+RL +P +RER +YG+KES+LA ID LG+ K+ +A +
Sbjct: 53 KFHSALHKESKTTDSFYPAMRLFVPQFERERMAYGIKESMLAKLYIDVLGLPKNGPEASK 112
Query: 90 LINWRKGGAAPN-----AGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
L+N+R APN AG+F VA VL++R G L+++E+ND LD +A + +
Sbjct: 113 LLNYR----APNISQGDAGDFASVAYFVLKKR-CTSQGNLSVQEVNDFLDSVAINNASKK 167
Query: 145 KISV---LSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKL 201
K V L LI +++A E KW++ +ILKD+KLG+S++++ FHPDA DL+NV DL
Sbjct: 168 KDLVKKSLLHLITQSSALEQKWLVRMILKDMKLGVSKETVLQVFHPDAPDLYNVNTDLNK 227
Query: 202 VCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH 261
VC++L D + IE+ A +P LA + + H +++ I+ K DG+RIQ+H
Sbjct: 228 VCQQLHDPSVSLSEVSIELFSAFKPMLAA-VANIHTVEKQMGNSPFYIQTKLDGERIQLH 286
Query: 262 KNGSEIHYFSRSFLDHS-EYG-----HAMSKIIEQ--NVLVDRCILDGEMLVWDTSLNRF 313
K+G YFSR+ +++ ++G +++ I N V CILDGEM+ ++ +
Sbjct: 287 KDGDVYKYFSRNAFEYTQQFGGSPLQGSLTPYIHNVFNSHVVNCILDGEMMAYNPTTETL 346
Query: 314 AEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGR 373
+ GS +I + D S+ Q C+ FDVL V D + + LK+R+E LQ V P KGR
Sbjct: 347 TQKGSKFDIKRLMDD---SELQTCFCVFDVLLVNDQKLGKEPLKKRYETLQTVFTPVKGR 403
Query: 374 LETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGD 433
+ H+ + + A + EV E I+NR+EGI++KD S ++P
Sbjct: 404 I-----------HLVSKTD------ARRMQEVVNALNEAIDNREEGIMVKDPSSIYKPDK 446
Query: 434 RSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFIS 492
R WLK+KPEY+ D LD+LI+GGY+G GRRGG ++ FL A+AE P P P F +
Sbjct: 447 RGEGWLKIKPEYVDGLMDELDLLIVGGYWGKGRRGGMMSHFLCAVAEAPKPGEKPSVFHT 506
Query: 493 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII 552
CR+G+G + +EL + KL +++ + K PP+ + E+P+V+IE P S+I
Sbjct: 507 LCRIGSGYTMKELYELGLKLAKHWKVFR--KSDPPASILC---AAEKPEVYIE-PCNSVI 560
Query: 553 LSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKE 612
+ + + + S+++ +LRFPRI+++R DK WH+C+ + + ++G +
Sbjct: 561 IQVKA-AEIVGSDMYKTDCTLRFPRIEKIREDKEWHECMTLAELDQFRSKASG--KLASR 617
Query: 613 YGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ + DD K+ R KK V + HF D+S +K ET +F D+ FCIL
Sbjct: 618 HLHIDDDPQKKKRRVPVKPKKVVGTL-EHFKAQDLSGVKKETDMFEDVEFCIL 669
>gi|431913220|gb|ELK14902.1| DNA ligase 4 [Pteropus alecto]
Length = 911
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 233/679 (34%), Positives = 378/679 (55%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVD------------YFSALRLILPSLDRE 59
L S IQ++K A+K FR+FLD++ D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQRSKGRAEKIRYFREFLDSWRKFHDALHKNQKNVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + ++ DA++L+N+R G +AG+F M+A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTRGDAGDFAMIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISVLSTL---IKKTNAQEMKWIIMIILKDLKLG 175
+ G L+I+++ND+LD +AS+ + K + +L I +++A E KW+I +I+KDL+LG
Sbjct: 138 LQKGSLSIQQVNDILDSVASNNSAKRKDLIKKSLLHFITQSSALEQKWLIRMIIKDLRLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
SE+++F FH DA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 198 FSEQTVFSVFHNDAAELHNVTTDLEKVCRQLHDPSIGLSDISITLFSAFKPMLAA-IADI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G YFSR+ ++E +G +++ +
Sbjct: 257 ERIEKDMKNQSFYIETKLDGERMQMHKDGDIYEYFSRNGYKYTEQFGASPQEGSLTPFVH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G+ +I + D SD Q CY FDVL V
Sbjct: 317 NAFKTDIQVCILDGEMMAYNPNTQTFMQKGNKFDIKRMVED---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + H++L++R+E+L + P GR+E + AH EV
Sbjct: 374 NKKLGHETLRKRYEILTSIFTPIPGRIEIVQKTQ-----------------AHTKKEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ D LDV+I+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDVIIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+ E+P P F + CRVG+G + +EL + KL Y++ + K+AP
Sbjct: 477 GGMMSHFLCAVTEKPPSGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKYWKPFH--KKAP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
P + E+P+V+IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 535 P---RSIVCGTEKPEVYIE-PCNSVIVQIKA-TEIVPSDMYKTGCTLRFPRIEKIREDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
W +C+ + +L ++G Y G DD+P++ + + K V + H +
Sbjct: 590 WRECMTLDDLEQLRGKASGKLASKHFYVG-GDDEPQEKKRKAAPKTKKVIGIIEHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
+S+I +SIF D+ FC++
Sbjct: 649 LSNINKVSSIFEDVEFCVM 667
>gi|379642981|ref|NP_001243858.1| DNA ligase 4 [Equus caballus]
Length = 911
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 235/679 (34%), Positives = 380/679 (55%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQK+K A+K F++FLD++ D D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKSKGRAEKIRHFKEFLDSWRKFHDALHKNQKDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + +D DA++L+N+R G + G+F +A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTRGDTGDFATIAYFVLKPR-S 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++ND+LD +AS+ + K + L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LPKGSLTIQQVNDILDSVASNNSAKRKDLIKKSLLQLITQSSALEQKWLIRMIVKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+SE+++F FH DA +L NVT DL+ VC +L D I + A +P LA I +
Sbjct: 198 VSEQTVFSAFHNDAAELHNVTTDLEKVCRQLHDPLIGLSDISITLFSAFKPMLAA-IANI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G YFSR+ D++ ++G +++ I
Sbjct: 257 ERIEKDMKHQSFYIETKLDGERMQMHKHGDVYQYFSRNGYDYTDQFGDSPQEGSLTPFIH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G+ +I + D SD Q CY FDVL V
Sbjct: 317 NAFQPDIQICILDGEMMAYNPNTQTFMQKGNKFDIKRMVED---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + ++L++R E+L + P GR+E + + AH EV
Sbjct: 374 NKKLGRETLRKRCEILSSIFMPIPGRIEIV-----------------QKMQAHTKQEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ +D LD+LI+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVNGLTDELDILIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE+P P F + CRVG+G + +EL + KL +++ + K+AP
Sbjct: 477 GGMMSHFLCAVAEKPPAGEKPSVFHTLCRVGSGYTMKELYDLGLKLAQHWKPFH--KKAP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GIEKPEVYIE-PCNSVIVQIKA-TEIVSSDMYKTGCTLRFPRIEKIREDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+CL + +L ++G Y G ++ ++ R S +K + I+ H +
Sbjct: 590 WHECLTLDDLEQLRGKASGKLASRHLYVGGDEEPQEKKRKSAPKIRKVIGII-EHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
+S+I +++F D+ FC++
Sbjct: 649 LSNINKVSNMFEDVEFCVM 667
>gi|300798388|ref|NP_001178055.1| DNA ligase 4 [Bos taurus]
gi|296481593|tpg|DAA23708.1| TPA: ligase IV, DNA, ATP-dependent [Bos taurus]
Length = 911
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 236/680 (34%), Positives = 380/680 (55%), Gaps = 57/680 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQK+K A+K F+ FLD++ D D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKSKGRAEKIRHFKAFLDSWRKFHNALHKNQKDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F M+A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTRGDAGDFAMIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEK----ISVLSTLIKKTNAQEMKWIIMIILKDLKL 174
+ G L+I+++ND+LD +AS+ + K SVL LI +++A E KW+I +I+KDLKL
Sbjct: 138 LQKGSLSIQQVNDILDSIASNNSAKRKDLMKKSVLQ-LITQSSALEQKWLIRMIVKDLKL 196
Query: 175 GISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGD 234
G S+++IF FH DA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 197 GFSQQTIFSIFHSDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-IAD 255
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDH-SEYGH-----AMSKII 288
+ + + IE K DG+R+Q+HK+G YFSR+ ++ ++G +++ I
Sbjct: 256 IERIEKDMKHQSFYIETKLDGERMQMHKDGDVYRYFSRNGYNYVDQFGASPQEGSLTPFI 315
Query: 289 EQ--NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYV 346
V CILDGEM+ ++ + F + G+ +I + D S+ Q CY FDVL V
Sbjct: 316 HNAFKTEVLNCILDGEMMAYNPNTQTFMQKGNKFDIKRMVED---SELQTCYCVFDVLMV 372
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
D + H++L++R+E+L V P GR+E + AH EV
Sbjct: 373 NDKKLGHETLRKRYEILNSVFTPVPGRIEIVQKTQ-----------------AHTKKEVI 415
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGR 465
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LIIGGY+G G
Sbjct: 416 DALNEAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDILIIGGYWGKGA 475
Query: 466 RGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA 525
RGG ++ FL A++E+P P F + CRVG+G + +EL + KL +++ + ++A
Sbjct: 476 RGGMMSHFLCAVSEKPPSGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFH--RKA 533
Query: 526 PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
PPS E+P+V+IE P S+I+ + + + S+++ +LRFPRI+++R DK
Sbjct: 534 PPSNILC---GTEKPEVYIE-PCNSVIVQVKA-TEIVPSDMYKTGCTLRFPRIEKIREDK 588
Query: 586 PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQT 645
W++C ++ +L + G Y G DD+P++ + + K V + H
Sbjct: 589 EWYECTSLEDLEQLRGKACGKLASRHLYLG-GDDEPQEKKRKAAPKMKKVIGIIEHLKAP 647
Query: 646 DVSDIKGETSIFSDMVFCIL 665
++S++ +++F D+ FC++
Sbjct: 648 NLSNVNRVSTVFEDVEFCVM 667
>gi|291393221|ref|XP_002713071.1| PREDICTED: DNA ligase (ATP) 4-like [Oryctolagus cuniculus]
Length = 911
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 234/679 (34%), Positives = 375/679 (55%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQ++K A K F +FLD++ D D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQRSKGRADKIRHFSEFLDSWRKFHDALHKNQKDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAA-PNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + ++ DA++L+N+R A +AG+F M A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPAATHGDAGDFAMTAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEK---ISVLSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++NDLLD +AS+ + K L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQQVNDLLDSVASNNSAKRKDLTKKSLLQLITQSSALEQKWLIRMIVKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S+++IF FH DA +L NVT DL+ VC +L + + I + A +P LA + D
Sbjct: 198 VSQQTIFSAFHADAVELHNVTTDLEKVCRQLHNPSVGLSDISITLFSAFKPMLAA-VADI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGHA-----MSKIIE 289
+ + + IE K DG+R+Q+HK+G YFSR+ +++ ++G A ++ I
Sbjct: 257 ERIEKDMKHQSFYIETKLDGERMQMHKDGDVYQYFSRNGYNYTDQFGAAPHEGSLTPFIH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
+ CILDGEM+ + F + G+ +I + D SD Q CY FDVL V
Sbjct: 317 SAFKTESQSCILDGEMMAYSPDTQTFMQKGNKFDIKRMVED---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + ++L+ R+E+L V P GR+E + +AH +EV
Sbjct: 374 NKKLGRETLRNRYEILSSVFTPVPGRIEIV-----------------QKTLAHTKNEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGLR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AERP P P F + CRVG+G + +EL + KL +++ + ++AP
Sbjct: 477 GGMMSHFLCAVAERPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFH--RKAP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
P E+P+V+IE P S+I+ + + + S ++ +LRFPRI+++R DK
Sbjct: 535 PGSILC---GTEKPEVYIE-PRNSVIVQVKA-AEIVPSTMYKTGCTLRFPRIEKIRDDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+C+ + +L ++G G DD+P++ + + K V + H +
Sbjct: 590 WHECMTLDDLEQLRGRASGKLASKHLCVG-ADDEPREKKRKAAPKMKKVIGIIEHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
+S+I ++IF D+ FC++
Sbjct: 649 LSNINKVSNIFEDVEFCVM 667
>gi|156739291|ref|NP_001096593.1| DNA ligase 4 [Danio rerio]
gi|152012596|gb|AAI50237.1| Zgc:165595 protein [Danio rerio]
Length = 909
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 228/683 (33%), Positives = 377/683 (55%), Gaps = 60/683 (8%)
Query: 10 IVLVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLD 57
I L ++ IQKTK K ++F+D++ D+ D +++A+RLI+PS +
Sbjct: 22 IHLCTVLEKIQKTKLRPDKSKILKEFIDSWRNFHAALHKDNPDTADSFYAAMRLIVPSFE 81
Query: 58 RERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPN-AGNFPMVAAEVLQRR 116
RER +YG+KE++LA I+ LG+ K+ +A +L+N+R + AG+F ++A VL++R
Sbjct: 82 RERMAYGIKENMLAKLYIEVLGLPKNGDEANKLLNYRAPTTSQGEAGDFALMAYFVLKKR 141
Query: 117 QGMISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLK 173
G L+IKE+ND L +A++ +K V L LI +++A E KW+I +ILKD+K
Sbjct: 142 -CTSQGNLSIKEVNDFLGSVATNNASKQKDQVKKSLLHLITQSSALEQKWLIRMILKDMK 200
Query: 174 LGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIG 233
LGIS++++ FHPDA + +NVT DL VC +L D + I++ A +P LA +
Sbjct: 201 LGISKETVLQVFHPDAPEFYNVTTDLNKVCRQLHDPSVSLSEVSIDLFSAFKPMLAA-VA 259
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGHA--------- 283
+ +++ + IE K DG+RIQ+HK G Y++R+ +++ ++G +
Sbjct: 260 NIRQIEKQMGNRPFYIETKLDGERIQLHKAGDVYKYYTRNSYEYTQQFGASPLEGSLTPY 319
Query: 284 MSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDV 343
+ + +V+ CILDGEM+ ++ F + GS +I + D SD Q C+ FDV
Sbjct: 320 IHTVFSPHVV--NCILDGEMMAYNPKTETFMQKGSKFDIKRLVDD---SDLQTCFCVFDV 374
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
L + + + LK+R+E L+ V P KGR+ + G +
Sbjct: 375 LLINNQKFGKEPLKKRYESLETVFSPIKGRIHLVSKSEG-----------------RTMQ 417
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYG 462
EV E I+NR+EGI++KD S ++P R WLK+KPEY+ D LD+LI+GGY+G
Sbjct: 418 EVVNSLNEAIDNREEGIMVKDPMSIYKPDKRGEGWLKIKPEYVDGLMDELDLLIVGGYWG 477
Query: 463 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
GRR G ++ FL A+AE P+P P F + CR+G+G + +EL + KL +++ Y
Sbjct: 478 KGRRSGMLSHFLCAVAEVPSPGEKPTVFHTLCRIGSGYTLKELYDLGVKLAKHWKVYN-- 535
Query: 523 KRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVR 582
K PP+ E+P+V+IE P S+IL + + + SE++ +LRFPRI+R+R
Sbjct: 536 KNNPPAAILC---GTEKPEVYIE-PRNSVILQVKA-AEIVTSEMYKTDCTLRFPRIERIR 590
Query: 583 YDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHF 642
DK WH C+ + + ++G + + + +D+P++ + + K V HF
Sbjct: 591 EDKEWHQCMTLDDLNQFRSKASG--KLASRHLNIHEDQPEKKKRKIVAKPKKTIGVIDHF 648
Query: 643 LQTDVSDIKGETSIFSDMVFCIL 665
D+S + ET +F ++ FC++
Sbjct: 649 KSQDLSKVAKETDMFEEVEFCVI 671
>gi|440898658|gb|ELR50104.1| DNA ligase 4, partial [Bos grunniens mutus]
Length = 916
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 236/680 (34%), Positives = 380/680 (55%), Gaps = 57/680 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQK+K A+K F+ FLD++ D D ++ A+RLILP L+RE
Sbjct: 24 LCSTLERIQKSKGRAEKIRHFKAFLDSWRKFHDALHKNQKDVTDSFYPAMRLILPQLERE 83
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F M+A VL+ R
Sbjct: 84 RMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTRGDAGDFAMIAYFVLKPR-C 142
Query: 119 MISGGLTIKELNDLLDRLASSENRAEK----ISVLSTLIKKTNAQEMKWIIMIILKDLKL 174
+ G L+I+++ND+LD +AS+ + K SVL LI +++A E KW+I +I+KDLKL
Sbjct: 143 LQKGSLSIQQVNDILDSIASNNSAKRKDLMKKSVLQ-LITQSSALEQKWLIRMIVKDLKL 201
Query: 175 GISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGD 234
G S+++IF FH DA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 202 GFSQQTIFSIFHSDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-IAD 260
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDH-SEYGH-----AMSKII 288
+ + + IE K DG+R+Q+HK+G YFSR+ ++ ++G +++ I
Sbjct: 261 IERIEKDMKHQSFYIETKLDGERMQMHKDGDVYRYFSRNGYNYVDQFGASPQEGSLTPFI 320
Query: 289 EQ--NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYV 346
V CILDGEM+ ++ + F + G+ +I + D S+ Q CY FDVL V
Sbjct: 321 HNAFKTEVLNCILDGEMMAYNPNTQTFMQKGNKFDIKRMVED---SELQTCYCVFDVLMV 377
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
D + H++L++R+E+L V P GR+E + AH EV
Sbjct: 378 NDKKLGHETLRKRYEILNSVFTPVPGRIEIVQKTQ-----------------AHTKKEVI 420
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGR 465
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LIIGGY+G G
Sbjct: 421 DALNEAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDILIIGGYWGKGA 480
Query: 466 RGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA 525
RGG ++ FL A++E+P P F + CRVG+G + +EL + KL +++ + ++A
Sbjct: 481 RGGMMSHFLCAVSEKPPSGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFH--RKA 538
Query: 526 PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
PPS E+P+V+IE P S+I+ + + + S+++ +LRFPRI+++R DK
Sbjct: 539 PPSNILC---GTEKPEVYIE-PCNSVIVQVKA-TEIVPSDMYKTGCTLRFPRIEKIREDK 593
Query: 586 PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQT 645
W++C ++ +L + G Y G DD+P++ + + K V + H
Sbjct: 594 EWYECTSLEDLEQLRGKACGKLASRHLYLG-GDDEPQEKKRKAAPKMKKVIGIIEHLKAP 652
Query: 646 DVSDIKGETSIFSDMVFCIL 665
++S++ +++F D+ FC++
Sbjct: 653 NLSNVNRVSTVFEDVEFCVM 672
>gi|354466703|ref|XP_003495812.1| PREDICTED: DNA ligase 4-like [Cricetulus griseus]
gi|344243977|gb|EGW00081.1| DNA ligase 4 [Cricetulus griseus]
Length = 912
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 234/679 (34%), Positives = 382/679 (56%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQK+K A+K F++FLD++ D D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKSKERAEKIRHFKEFLDSWRKFHDALHKNKKDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + ++ DA++L+N+R GA +AG+F ++A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPSGARTDAGDFAVIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++N+LLD +AS+ + K V L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQQVNELLDLVASNNSGKRKDLVKKSLLQLITQSSALEQKWLIRMIIKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S+++I + FH DA +L NVT DL+ VC +L D I + A +P LA + D
Sbjct: 198 VSQQTILNIFHNDAVELHNVTTDLEKVCRQLHDPAVGLSDISITLFSAFKPMLAA-VADV 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGHA-----MSKIIE 289
+ + + IE K DG+R+Q+HK+GS YFSR+ +++ ++G + ++ I
Sbjct: 257 ERVEKDMKQQSFYIETKLDGERMQMHKDGSVYQYFSRNGYNYTDQFGASPQEGTLTPFIH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G +I + D SD Q CY FDVL V
Sbjct: 317 DAFRTDVQVCILDGEMMAYNPTTQTFMQKGVKFDIKRMVED---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + ++L++R+++L P +GR+E + +A +EV
Sbjct: 374 NKKLGRETLRKRYDILNSTFTPIQGRIEIVQKK-----------------LAQTKNEVVD 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDLLIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE+P P F + CRVG+G + +EL + KL Y++ + K++P
Sbjct: 477 GGMMSHFLCAVAEKPPHGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKYWKPFH--KKSP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGTTLRFPRIEKIRDDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+C+ + EL ++G + G DD+P++ R + K + H +
Sbjct: 590 WHECMTLGDLEELRGKASGKLATKHLHVG-DDDEPREKRRKPVSKMKKTIGIIEHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
+S+I +++F D+ FC++
Sbjct: 649 LSNISKVSNVFEDVEFCVM 667
>gi|332242096|ref|XP_003270220.1| PREDICTED: DNA ligase 4 isoform 5 [Nomascus leucogenys]
Length = 844
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 224/630 (35%), Positives = 361/630 (57%), Gaps = 43/630 (6%)
Query: 49 LRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPM 107
+RLILP L+RER +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F M
Sbjct: 1 MRLILPQLERERMAYGIKETMLAKFYIELLNLPRDGKDALKLLNYRTPTGTHGDAGDFAM 60
Query: 108 VAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWI 164
+A VL+ R + G LTI+++NDLLD +AS+ + K + L LI +++A E KW+
Sbjct: 61 IAYFVLKPR-CLQKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLISQSSALEQKWL 119
Query: 165 IMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAV 224
I +I+KDLKLG+S+++IF FH DA +L NVT DL+ VC +L D + I + A
Sbjct: 120 IRMIIKDLKLGVSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAF 179
Query: 225 RPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH- 282
+P LA I D + + + IE K DG+R+Q+HK+G YFSR+ +++ ++G
Sbjct: 180 KPMLAA-IADIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTDQFGAS 238
Query: 283 ----AMSKIIEQNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL 336
+++ I D CILDGEM+ ++ + F + G+ +I + D SD Q
Sbjct: 239 PTEGSLTPFIHNAFKTDIQICILDGEMMAYNPNTQTFMQKGTKFDIKRMVED---SDLQT 295
Query: 337 CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
CY FDVL V + + H++L++R+E+L + P GR+E +
Sbjct: 296 CYCVFDVLMVNNKKLGHETLRKRYEILSNIFTPIPGRIEIVQKTQ--------------- 340
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVL 455
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+L
Sbjct: 341 --AHTKNEVIDALNEAIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVSGLIDELDIL 398
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
I+GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y
Sbjct: 399 IVGGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGYTMKELYDLGLKLAKY 458
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 575
++ + K+APPS E+P+V+IE P S+I+ I + + S+++ +LRF
Sbjct: 459 WKPFH--KKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRF 511
Query: 576 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNV 635
PRI+++R DK WH+C+ + +L ++G Y G DD+P++ + + K V
Sbjct: 512 PRIEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYVG-GDDEPQEKKRKAAPKMKKV 570
Query: 636 SIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ H +++++ ++IF D+ FC++
Sbjct: 571 IGIIEHLKAPNLTNVNKISNIFEDVEFCVM 600
>gi|73989476|ref|XP_542663.2| PREDICTED: DNA ligase 4 [Canis lupus familiaris]
Length = 911
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 238/680 (35%), Positives = 382/680 (56%), Gaps = 57/680 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDT---YCDSV---------DYFSALRLILPSLDRE 59
L S IQ++K +K FR+FLD+ + D++ ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQRSKGREEKIRHFREFLDSWRRFHDALHKNQKDVRDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + K+ DA++L+N+R G +AG+F +A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPKEGKDALKLLNYRTPTGTRGDAGDFATIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++ND+LD +AS+ + +K + L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQQVNDILDSIASNNSARKKDLIKKSLLQLITQSSALEQKWLIRMIVKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
SE+S+F FH DA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 198 FSEQSVFSAFHNDAAELHNVTTDLEKVCRQLHDPSIGLSDISITLFSAFKPMLAA-IADI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G YFSR+ +++ ++G +++ I
Sbjct: 257 ERIEKDMKHQSFYIETKLDGERMQMHKDGDVYQYFSRNGYNYTDQFGDSPREGSLTPFIH 316
Query: 290 QNVLVDR--CILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G+ +I + D SD Q CY FDVL V
Sbjct: 317 SAFKTDVQICILDGEMMAFNPNTQTFMQKGNKFDIKRMVED---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + ++LK+R+E+L V P GR+E + AH EV
Sbjct: 374 NKKLGRETLKKRYEILTSVFTPIPGRIEIVQKTQ-----------------AHTKKEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVDGLMDELDILIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE+P P P F + CRVG+G + +EL + KL +++ + K+A
Sbjct: 477 GGMMSHFLCAVAEKPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFH--KKAL 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P S+I+ + + + S+++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GTEKPEVYIE-PCNSVIVQVKA-TEIVSSDMYKTGCTLRFPRIEKIREDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGT-TQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQT 645
WH+C V +L ++G K + GG DD+P++ + + K + + H
Sbjct: 590 WHECTTVDDLEQLRGKASGKLASKHLDIGG--DDEPQEKKRKAAPKIKKIIGIIEHLKAP 647
Query: 646 DVSDIKGETSIFSDMVFCIL 665
++S+I ++IF D+ FC++
Sbjct: 648 NLSNINKVSNIFEDVEFCVM 667
>gi|147821631|emb|CAN60030.1| hypothetical protein VITISV_000373 [Vitis vinifera]
Length = 304
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/314 (63%), Positives = 218/314 (69%), Gaps = 74/314 (23%)
Query: 4 TEETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSY 63
EET+ VL SLF WIQ+++ +AKKRSKFR FLDT+C + FSA+RLILP+LDRERGSY
Sbjct: 2 CEETKFSVLCSLFTWIQRSRTSAKKRSKFRIFLDTFCINGHQFSAIRLILPNLDRERGSY 61
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGA--APNAGNFPMVAAEVLQRRQGMIS 121
GLKESVLA CLIDALGMS++S DA+RLINWRKGGA NAGNF MVAAEVLQRRQGM S
Sbjct: 62 GLKESVLATCLIDALGMSRESEDALRLINWRKGGAKTGANAGNFAMVAAEVLQRRQGMTS 121
Query: 122 GGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSI 181
GGLTIKELNDLLD LAS +LKLGISEKSI
Sbjct: 122 GGLTIKELNDLLDCLAS--------------------------------NLKLGISEKSI 149
Query: 182 FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ------------------------- 216
FHEFHPDAEDLFNVTCDLKLVCEKLKDR+QRHKRQ
Sbjct: 150 FHEFHPDAEDLFNVTCDLKLVCEKLKDRSQRHKRQPFSEPLLGLEANLEKSKLILFGQAR 209
Query: 217 ---------------DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH 261
DIEVGKAVRPQLAMR+ DA AAW+KLHGKEVV+ECKFDGDRIQIH
Sbjct: 210 EIDSSANGLGCRFVLDIEVGKAVRPQLAMRVADATAAWKKLHGKEVVVECKFDGDRIQIH 269
Query: 262 KNGSEIHYFSRSFL 275
KNG EIH+FSR+ L
Sbjct: 270 KNGEEIHFFSRTSL 283
>gi|224043062|ref|XP_002198469.1| PREDICTED: DNA ligase 4 [Taeniopygia guttata]
Length = 911
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 238/680 (35%), Positives = 377/680 (55%), Gaps = 57/680 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQK+K +K F+ FLD++ D D ++ A+RLILP L+RE
Sbjct: 23 LCSTLERIQKSKSRPEKTKYFKDFLDSWRKFHDALHQKEKDVTDSFYPAMRLILPHLERE 82
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + KD DA RL+N+R G+ +AG+F M+A VL+ R
Sbjct: 83 RMAYGIKETMLAKLYIELLSLPKDGKDAARLLNYRTPTGSRGDAGDFAMIAYFVLKPRSP 142
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
G LTI+++N+ LD +A++ K + L LI ++ A E KW+I +I+KDLKLG
Sbjct: 143 K-QGRLTIEQVNEHLDAIANNNAAKNKGQLKKSLLQLITQSTALEQKWLIRMIIKDLKLG 201
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S+++IF FHPDA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 202 VSQQTIFSVFHPDAVELHNVTTDLEKVCRQLHDPSVSLSDVSIMLFSAFKPMLAA-IADV 260
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+++ + IE K DG+R+Q+HK+G YFSR+ D++ ++G +++ I
Sbjct: 261 QQIEKQMSNQTFYIETKLDGERMQMHKDGDVYKYFSRNGFDYTQQFGASPLEGSLTPFI- 319
Query: 290 QNVL---VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYV 346
NV + CILDGEM+ ++ F + G+ +I + D SD Q C+ FDVL V
Sbjct: 320 HNVFKSNIQNCILDGEMMAYNPEAQSFMQKGNKFDIKRMVED---SDLQTCFCVFDVLMV 376
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
D + H+ L +R+E+L V P KGR+ + H ++ R EV
Sbjct: 377 NDQKLGHEVLSKRYEILSSVFTPVKGRIHVV---HKRSARTR--------------KEVI 419
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGR 465
E I+NR+EGI++KD S ++P R WLK+KPEY+ D LD+LI+GGY+G G
Sbjct: 420 DALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGS 479
Query: 466 RGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA 525
RGG ++ FL A+AE P P+ P F S CRVG+G + +EL + KL +++ Y ++
Sbjct: 480 RGGMMSHFLCAVAETPPPNEKPTIFHSICRVGSGYTMKELYDLGLKLAKHWKPYH--RKD 537
Query: 526 PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
PP E+P+++IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 538 PPGNILC---GAEKPEMYIE-PCNSVIVQIKA-AEIVDSDMYKTDCTLRFPRIEKIREDK 592
Query: 586 PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQT 645
W++C+ +L + + G K + D+P + + + + V + F
Sbjct: 593 EWYECMTSDMLEDLRNKAQGKL-ASKHLRIDEYDEPHEKKRKTVSKVRKVIGIAEQFKAP 651
Query: 646 DVSDIKGETSIFSDMVFCIL 665
D+S + +++F D+ FC++
Sbjct: 652 DLSSVSKVSNVFEDVEFCVM 671
>gi|158258270|dbj|BAF85108.1| unnamed protein product [Homo sapiens]
Length = 844
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/630 (35%), Positives = 361/630 (57%), Gaps = 43/630 (6%)
Query: 49 LRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPM 107
+RLILP L+RER +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F M
Sbjct: 1 MRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHGDAGDFAM 60
Query: 108 VAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWI 164
+A VL+ R + G LTI+++NDLLD +AS+ + K + L LI +++A E KW+
Sbjct: 61 IAYFVLKPR-CLQKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLITQSSALEQKWL 119
Query: 165 IMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAV 224
I +I+KDLKLG+S+++IF FH DA +L NVT DL+ VC +L D + I + A
Sbjct: 120 IRMIIKDLKLGVSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAF 179
Query: 225 RPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH- 282
+P LA I D + + + IE K DG+R+Q+HK+G YFSR+ +++ ++G
Sbjct: 180 KPMLAA-IADIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTDQFGAS 238
Query: 283 ----AMSKIIEQNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL 336
+++ I D CILDGEM+ ++ + F + G+ +I + D SD Q
Sbjct: 239 PTEGSLTPFIHNAFKADIQICILDGEMMAYNPNTQTFMQKGTKFDIKRMVED---SDLQT 295
Query: 337 CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
CY FDVL V + + H++L++R+E+L + P GR+E +
Sbjct: 296 CYCVFDVLMVNNKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQ--------------- 340
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVL 455
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+L
Sbjct: 341 --AHTKNEVIDALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDIL 398
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
I+GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y
Sbjct: 399 IVGGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKY 458
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 575
++ + ++APPS E+P+V+IE P S+I+ I + + S+++ +LRF
Sbjct: 459 WKPFH--RKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRF 511
Query: 576 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNV 635
PRI+++R DK WH+C+ + +L ++G Y G DD+P++ + + K V
Sbjct: 512 PRIEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKKRKAAPKMKKV 570
Query: 636 SIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ H +++++ ++IF D+ FC++
Sbjct: 571 IGIIEHLKAPNLTNVNKISNIFEDVEFCVM 600
>gi|426375944|ref|XP_004054774.1| PREDICTED: DNA ligase 4 isoform 4 [Gorilla gorilla gorilla]
Length = 844
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/630 (35%), Positives = 361/630 (57%), Gaps = 43/630 (6%)
Query: 49 LRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPM 107
+RLILP L+RER +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F M
Sbjct: 1 MRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHGDAGDFAM 60
Query: 108 VAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWI 164
+A VL+ R + G LTI+++NDLLD +AS+ + K + L LI +++A E KW+
Sbjct: 61 IAYFVLKPR-CLQKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLITQSSALEQKWL 119
Query: 165 IMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAV 224
I +I+KDLKLG+S+++IF FH DA +L NVT DL+ VC +L D + I + A
Sbjct: 120 IRMIIKDLKLGVSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAF 179
Query: 225 RPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH- 282
+P LA I D + + + IE K DG+R+Q+HK+G YFSR+ +++ ++G
Sbjct: 180 KPMLAA-IADIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTDQFGAS 238
Query: 283 ----AMSKIIEQNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL 336
+++ I D CILDGEM+ ++ + F + G+ +I + D SD Q
Sbjct: 239 PTEGSLTPFIHNAFKTDIQICILDGEMMAYNPNTQTFMQKGTKFDIKRMVED---SDLQT 295
Query: 337 CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
CY FDVL V + + H++L++R+E+L + P GR+E +
Sbjct: 296 CYCVFDVLMVNNKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQ--------------- 340
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVL 455
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+L
Sbjct: 341 --AHTKNEVIDALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDIL 398
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
I+GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y
Sbjct: 399 IVGGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKY 458
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 575
++ + ++APPS E+P+V+IE P S+I+ I + + S+++ +LRF
Sbjct: 459 WKPFH--RKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRF 511
Query: 576 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNV 635
PRI+++R DK WH+C+ + +L ++G Y G DD+P++ + + K V
Sbjct: 512 PRIEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKKRKAAPKMKKV 570
Query: 636 SIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ H +++++ ++IF D+ FC++
Sbjct: 571 IGIIEHLKAPNLTNVNKISNIFEDVEFCVM 600
>gi|335297113|ref|XP_003131137.2| PREDICTED: DNA ligase 4-like [Sus scrofa]
Length = 910
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 237/684 (34%), Positives = 373/684 (54%), Gaps = 66/684 (9%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVD------------YFSALRLILPSLDRE 59
L S IQ+++ +K F++FLD++ D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQRSRGRGEKMRHFKEFLDSWRKFHDALHKNHRDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F ++A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTRGDAGDFAIIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++NDLLD +AS+ + K V L LI +++A E KW+I +ILKDLKLG
Sbjct: 138 LQKGSLTIQQVNDLLDSIASNNSAKRKDLVKKSLLQLITQSSALEQKWLIRMILKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
S+++IF FH DA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 198 FSQQTIFSLFHDDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-IADI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-------------YGH 282
+ + + IE K DG+R+Q+HK+G YFSR+ ++ + + H
Sbjct: 257 ERIEKDMKHQSFYIETKLDGERMQMHKDGDVYQYFSRNGYNYGDQFGVSPQEGSLTPFIH 316
Query: 283 AMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFD 342
K QN CILDGEM+ ++ + F + G+ +I + D SD Q CY FD
Sbjct: 317 GTFKTNVQN-----CILDGEMMAYNPNTQTFMQKGNKFDIKRMVED---SDLQTCYCVFD 368
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
VL V + H++LK R+E+L V P GR+E +VP AH
Sbjct: 369 VLMVNSKKLGHETLKNRYEILSSVFTPIPGRIE-IVP----------------KTQAHTK 411
Query: 403 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYY 461
EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+GGY+
Sbjct: 412 KEVIDALNEAIDKREEGIMIKYPLSIYKPDKRGEGWLKIKPEYVNGLMDELDILIVGGYW 471
Query: 462 GSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 521
G G RGG ++ FL A+AE+P P F + CRVG+G + +EL + KL +++ +
Sbjct: 472 GKGARGGMMSHFLCAVAEKPPAGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFH- 530
Query: 522 PKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 581
++APP E+P+V+IE P S+I+ + + + S+++ +LRFPRI+++
Sbjct: 531 -RKAPPGSILC---GTEKPEVYIE-PCNSVIVQVKA-AEIVPSDMYKTGCTLRFPRIEKI 584
Query: 582 RYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSH 641
R DK WH+C + L + G Y G D++P++ + + K V + H
Sbjct: 585 REDKEWHECTTLDDLEHLRGKAAGKLASKHLYVG--DEEPQEKKRKAAPKAKKVIGIIEH 642
Query: 642 FLQTDVSDIKGETSIFSDMVFCIL 665
++S+I +++F D+ FC++
Sbjct: 643 LKAPNLSNINKVSNMFEDVEFCVM 666
>gi|332841620|ref|XP_003314255.1| PREDICTED: DNA ligase 4 [Pan troglodytes]
Length = 844
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/630 (35%), Positives = 361/630 (57%), Gaps = 43/630 (6%)
Query: 49 LRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPM 107
+RLILP L+RER +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F M
Sbjct: 1 MRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHGDAGDFAM 60
Query: 108 VAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWI 164
+A VL+ R + G LTI+++NDLLD +AS+ + K + L LI +++A E KW+
Sbjct: 61 IAYFVLKPR-CLQKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLITQSSALEQKWL 119
Query: 165 IMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAV 224
I +I+KDLKLG+S+++IF FH DA +L NVT DL+ VC +L D + I + A
Sbjct: 120 IRMIIKDLKLGVSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAF 179
Query: 225 RPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH- 282
+P LA I + + + + IE K DG+R+Q+HK+G YFSR+ +++ ++G
Sbjct: 180 KPMLAA-IANIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTDQFGAS 238
Query: 283 ----AMSKIIEQNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL 336
+++ I D CILDGEM+ ++ + F + G+ +I + D SD Q
Sbjct: 239 STEGSLTPFIHNAFKADIQICILDGEMMAYNPNTQTFMQKGTKFDIKRMVED---SDLQT 295
Query: 337 CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
CY FDVL V + + H++L++R+E+L + P GR+E +
Sbjct: 296 CYCVFDVLMVNNKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQ--------------- 340
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVL 455
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+L
Sbjct: 341 --AHTKNEVIDALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDIL 398
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
I+GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y
Sbjct: 399 IVGGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKY 458
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 575
++ + ++APPS E+P+V+IE P S+I+ I + + S+++ +LRF
Sbjct: 459 WKPFH--RKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRF 511
Query: 576 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNV 635
PRI+++R DK WH+C+ + +L ++G Y G DD+P++ R + K V
Sbjct: 512 PRIEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKRRKAAPKMKKV 570
Query: 636 SIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ H +++++ ++IF D+ FC++
Sbjct: 571 IGIIEHLKAPNLTNVNKISNIFEDVEFCVM 600
>gi|18653446|gb|AAL77435.1|AF479264_1 ligase IV, DNA, ATP-dependent [Homo sapiens]
Length = 844
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/630 (35%), Positives = 361/630 (57%), Gaps = 43/630 (6%)
Query: 49 LRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPM 107
+RLILP L+RER +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F M
Sbjct: 1 MRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHGDAGDFAM 60
Query: 108 VAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWI 164
+A VL+ R + G LTI+++NDLLD +AS+ + K + L LI +++A E KW+
Sbjct: 61 IAYFVLKPR-CLQKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLITQSSALEQKWL 119
Query: 165 IMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAV 224
I +I+KDLKLG+S+++IF FH DA +L NVT DL+ VC +L D + I + A
Sbjct: 120 IRMIIKDLKLGVSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAF 179
Query: 225 RPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH- 282
+P LA I D + + + IE K DG+R+Q+HK+G YFSR+ +++ ++G
Sbjct: 180 KPMLAA-IADIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTDQFGAS 238
Query: 283 ----AMSKIIEQNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL 336
+++ I D CILDGEM+ ++ + F + G+ +I + D SD Q
Sbjct: 239 PTEGSLTPFIHNAFKADIQICILDGEMMAYNPNTQTFMQKGTKFDIKRMVED---SDLQT 295
Query: 337 CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
CY FDVL V + + H++L++R+E+L + P GR+E +
Sbjct: 296 CYCVFDVLMVNNKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQ--------------- 340
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVL 455
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+L
Sbjct: 341 --AHTKNEVIDALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDIL 398
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
I+GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y
Sbjct: 399 IVGGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKY 458
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 575
++ + ++APPS E+P+V+IE P S+I+ I + + S+++ +LRF
Sbjct: 459 WKPFH--RKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRF 511
Query: 576 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNV 635
PRI+++R DK WH+C+ + +L ++G Y G DD+P++ + + K V
Sbjct: 512 PRIEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKKRKAAPKMKKV 570
Query: 636 SIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ H +++++ ++IF D+ FC++
Sbjct: 571 IGIIEHLKAPNLTNVNKISNIFEDVEFCVM 600
>gi|860937|emb|CAA58467.1| DNA ligase IV [Homo sapiens]
Length = 844
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/630 (35%), Positives = 361/630 (57%), Gaps = 43/630 (6%)
Query: 49 LRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPM 107
+RLILP L+RER +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F M
Sbjct: 1 MRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHGDAGDFAM 60
Query: 108 VAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWI 164
+A VL+ R + G LTI+++NDLLD +AS+ + K + L LI +++A E KW+
Sbjct: 61 IAYFVLKPR-CLQKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLITQSSALEQKWL 119
Query: 165 IMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAV 224
I +I+KDLKLG+S+++IF FH DA +L NVT DL+ VC +L D + I + A
Sbjct: 120 IRMIIKDLKLGVSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAS 179
Query: 225 RPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH- 282
+P LA I D + + + IE K DG+R+Q+HK+G YFSR+ +++ ++G
Sbjct: 180 KPMLAA-IADIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTDQFGAS 238
Query: 283 ----AMSKIIEQNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL 336
+++ I D CILDGEM+ ++ + F + G+ +I + D SD Q
Sbjct: 239 PTEGSLTPFIHNAFKADIQICILDGEMMAYNPNTQTFMQKGTKFDIKRMVED---SDLQT 295
Query: 337 CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
CY FDVL V + + H++L++R+E+L + P GR+E +
Sbjct: 296 CYCVFDVLMVNNKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQ--------------- 340
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVL 455
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+L
Sbjct: 341 --AHTKNEVIDALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDIL 398
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
I+GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y
Sbjct: 399 IVGGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKY 458
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 575
++ + ++APPS E+P+V+IE P S+I+ I + + S+++ +LRF
Sbjct: 459 WKPFH--RKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRF 511
Query: 576 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNV 635
PRI+++R DK WH+C+ + +L ++G Y G DD+P++ + + K V
Sbjct: 512 PRIEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKKRKAAPKMKKV 570
Query: 636 SIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ H +++++ ++IF D+ FC++
Sbjct: 571 IGIIEHLKAPNLTNVNKISNIFEDVEFCVM 600
>gi|348583744|ref|XP_003477632.1| PREDICTED: DNA ligase 4-like [Cavia porcellus]
Length = 911
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 236/679 (34%), Positives = 376/679 (55%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVD------------YFSALRLILPSLDRE 59
L S IQK+K A+K F++FLD++ D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKSKGRAEKIRHFKEFLDSWRKFHDALHKNQKDVKDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + ++ DA++L+N+R G +AG+F M+A VL+ R
Sbjct: 79 RMAYGIKETMLAKFYIELLNLPREGKDALKLLNYRTPTGTRGDAGDFAMIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G L I+++N+LLD +AS+ + +K V L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLNIQQVNELLDSIASNNSAKKKDLVKKSLLQLITQSSALEQKWLIRMIVKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
SEK+I FH DA +L NVT DL+ VC +L D + I + A +P LA I +
Sbjct: 198 FSEKTILSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-IANI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G YFSR+ +++ ++G +++ I
Sbjct: 257 EHIEKDMKQQSFYIETKLDGERMQMHKDGDVYRYFSRNGYNYTDQFGASPNEGSLTPFIH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
+ D CILDGEM+ ++ + F + G+ +I + + SD Q CY FDVL V
Sbjct: 317 KAFKTDVQTCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEE---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + ++LK+RHE+L P GR+E + A EV
Sbjct: 374 NKKLGRETLKKRHEILNNTFTPIPGRMEIVQKAQ-----------------ARTKKEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDILIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE+P P F + CRVG+G + +EL + KL Y++ + K+AP
Sbjct: 477 GGMMSHFLCAVAEKPPSGEKPTVFHTLCRVGSGYTMKELYDLGLKLAKYWKPFH--KKAP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P S+I+ I + + SE++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GTEKPEVYIE-PCHSVIVQIKA-AEIVPSEMYKTCCTLRFPRIEKIRDDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+C+ + +L ++G K D+PK+ + + K V + H +
Sbjct: 590 WHECMTLDQLEQLGGKASGKLA-SKHLDLDSTDEPKEKKRKTAPKVKKVIGILEHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
+S++ ++IF D+ FC++
Sbjct: 649 LSNVSKVSNIFEDVEFCVM 667
>gi|157824095|ref|NP_001099565.1| DNA ligase 4 [Rattus norvegicus]
gi|149057556|gb|EDM08799.1| rCG42995, isoform CRA_a [Rattus norvegicus]
gi|149057557|gb|EDM08800.1| rCG42995, isoform CRA_a [Rattus norvegicus]
Length = 911
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 232/679 (34%), Positives = 376/679 (55%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVD------------YFSALRLILPSLDRE 59
L S IQK K A+K F++FLD++ D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKGKDRAEKIRHFKEFLDSWRKFHDALHKNKKDVPDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + ++ DA +L+N+R GA +AG+F +A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPREGKDAQKLLNYRTPSGARSDAGDFATIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++N+LLD +AS+ + K V L LI + +A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQKVNELLDLVASNNSGKRKDLVKKSLLQLITQCSALEQKWLIRMIIKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S+ +I FH DA +L NVT DL+ VC +L D + I + A RP LA + D
Sbjct: 198 VSQHTILSIFHNDAVELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFRPMLAA-VADV 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G+ YFSR+ +++ ++G +++ I
Sbjct: 257 ERVEKDMKQQSFYIETKLDGERMQMHKDGALYRYFSRNGYNYTDQFGESPQEGSLTPFIH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G +I + D SD Q CY FDVL V
Sbjct: 317 NAFKTDVQVCILDGEMMAYNPTTQTFMQKGVKFDIKRMVED---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + ++L++R+++L P +GR+E + A EV
Sbjct: 374 NKKLGRETLRKRYDILSSTFTPIQGRIEIVQKTQ-----------------AQTKQEVVD 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
+ I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+GGY+G G R
Sbjct: 417 ALNDAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVTGLMDELDLLIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE P P P F + CRVG+G + +EL + KL Y++ ++ +++P
Sbjct: 477 GGMMSHFLCAVAETPPPGDKPSVFHTLCRVGSGYTMKELYDLGLKLAKYWKPFQ--RKSP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P+ S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 535 PSCILC---GTEKPEVYIE-PQNSVIVQIKA-AEIVPSDMYKTGSTLRFPRIEKIRDDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WHDC+ + +L ++G + G DD+P++ R + K + H +
Sbjct: 590 WHDCMTLDDLEQLRGKASGKLATKHLHIG-DDDEPREKRRKPISKTKKTIGIIEHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
+S+I +++F D+ FC++
Sbjct: 649 LSNINKVSNVFEDVEFCVM 667
>gi|426236659|ref|XP_004012285.1| PREDICTED: DNA ligase 4 [Ovis aries]
Length = 911
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 234/680 (34%), Positives = 377/680 (55%), Gaps = 57/680 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQK+K A+K F+ FLD++ D D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKSKGRAEKIRHFKAFLDSWRKFHDALHKNQKDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE +LA ++ L + +D DA++L+N+R G +AG+F M+A VL+ R
Sbjct: 79 RMAYGIKEIMLAKLYVELLNLPRDGKDALKLLNYRTPTGTRGDAGDFAMIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEK----ISVLSTLIKKTNAQEMKWIIMIILKDLKL 174
+ G L+I+++ND+LD +AS+ + K SVL LI +++A E KW+I +I+KDLKL
Sbjct: 138 LQKGSLSIQQVNDILDSIASNNSAKRKDLMKKSVLQ-LITQSSALEQKWLIRMIVKDLKL 196
Query: 175 GISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGD 234
G S+ ++F FH DA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 197 GFSQHTVFSVFHRDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-IAD 255
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKII 288
+ + + IE K DG+R+Q+HK+G YFSR+ ++ ++G +++ I
Sbjct: 256 IERIEKDMKHQSFYIETKLDGERMQMHKDGDVYRYFSRNGYNYEDQFGASPQEGSLTPFI 315
Query: 289 EQNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYV 346
D CILDGEM+ ++ + F + G+ +I + D S+ Q CY FDVL V
Sbjct: 316 HNAFRTDVLNCILDGEMMAYNPNTQTFMQKGNKFDIKRMVED---SELQTCYCVFDVLMV 372
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
D + H++L++R E+L V P GR+E + AH EV
Sbjct: 373 NDKKLGHETLRKRFEILNSVFTPVPGRIEIVQKTQ-----------------AHTKKEVI 415
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGR 465
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+GGY+G G
Sbjct: 416 DALNEAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYWGKGA 475
Query: 466 RGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA 525
RGG ++ FL A+AE+PA P F + CRVG+G + +EL + KL +++ + ++A
Sbjct: 476 RGGMMSHFLCAVAEKPASGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKAFH--RKA 533
Query: 526 PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
PPS E+P+V+IE P S+I+ + + + S+++ +LRFPRI+++R DK
Sbjct: 534 PPSNILC---GTEKPEVYIE-PCNSVIVQVKA-TEIVPSDMYKTGCTLRFPRIEKIREDK 588
Query: 586 PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQT 645
W++C ++ +L + G Y DD+P++ + + K V + H
Sbjct: 589 EWYECTSLEDLEQLRGKACGKLASKHLYMS-GDDEPQEKKRKAAPKMKKVIGIIEHLKAP 647
Query: 646 DVSDIKGETSIFSDMVFCIL 665
++S++ +++F D+ FC++
Sbjct: 648 NLSNVNRVSTVFEDVEFCVM 667
>gi|444706089|gb|ELW47449.1| DNA ligase 4 [Tupaia chinensis]
Length = 844
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 225/630 (35%), Positives = 357/630 (56%), Gaps = 43/630 (6%)
Query: 49 LRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPM 107
+RLILP L+RER +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F M
Sbjct: 1 MRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTRGDAGDFAM 60
Query: 108 VAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWI 164
+A VL+ R + G LTI+++NDLLD +AS+ + K + L LI +++A E KW+
Sbjct: 61 IAYFVLKPR-CLQKGSLTIQQVNDLLDSVASNNSAKRKDLIKKSLLQLITQSSALEQKWL 119
Query: 165 IMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAV 224
I +I+KDLKLG+S+++IF FH DA +L NVT DL+ VC +L D I + A
Sbjct: 120 IRMIVKDLKLGVSQQTIFSAFHNDAAELHNVTTDLEKVCRQLHDPTVGLSDISITLFSAF 179
Query: 225 RPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH- 282
+P LA I D + + + IE K DG+R+Q+HK+G YFSR+ D++ ++G
Sbjct: 180 KPMLAA-IADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYQYFSRNGYDYTDQFGAS 238
Query: 283 ----AMSKIIEQNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL 336
+++ I D CILDGEM+ ++ F + G+ +I + D S+ Q
Sbjct: 239 PREGSLTPFIHNAFKTDIQNCILDGEMMAYNPETQTFMQKGNKFDIKRMVED---SELQT 295
Query: 337 CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
CY FDVL V + + H++L++R+E+L P GR+E +
Sbjct: 296 CYCVFDVLMVNNKKLGHETLRKRYEILSSTFAPILGRVEIVQKTQ--------------- 340
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVL 455
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+L
Sbjct: 341 --AHTKNEVIDALNEAIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDIL 398
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
I+GGY+G G RGG ++ FL A+AE P P P F + CRVG+G + +EL + KL +
Sbjct: 399 IVGGYWGKGSRGGMMSHFLCAVAENPPPGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKH 458
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 575
++ + K++PPS E+P+V+IE P S+I+ I + + S+++ +LRF
Sbjct: 459 WKPFH--KKSPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRF 511
Query: 576 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNV 635
PRI+R+R DK WH+C+ + +L ++G K Y DD+P++ + + + V
Sbjct: 512 PRIERIRDDKVWHECMTLGDLEQLRGKASGKL-ASKHYFLGGDDEPREKKRRTAPKTRKV 570
Query: 636 SIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ H ++S+I + IF D+ FC++
Sbjct: 571 IGIIQHLKAPNLSNINKVSDIFEDVEFCVM 600
>gi|18029886|gb|AAL56554.1|AF393656_1 DNA ligase IV [Xenopus laevis]
Length = 911
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 232/685 (33%), Positives = 381/685 (55%), Gaps = 69/685 (10%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVD------------YFSALRLILPSLDRE 59
L IQK K +K F++F+D++ D ++ A+RL+LP L+RE
Sbjct: 24 LCCTLEKIQKCKNRTEKSHIFKQFVDSWRKFHDALHKNRPKTTDSFYPAMRLVLPQLERE 83
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAA-PNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I LG+ K+ DA++L+N+R ++ +AG+F +A VL+ R
Sbjct: 84 RMAYGIKETMLAKLYIKVLGLPKEGKDALKLLNYRTPTSSHSDAGDFAAIAYFVLKSR-C 142
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISVLST----LIKKTNAQEMKWIIMIILKDLKL 174
G L+I+E+N LD +A++ N A+K ++ LI T A E KW+I +I+KD+KL
Sbjct: 143 RKEGNLSIQEVNYHLDSIANN-NAAKKKELIEKSLLHLIANTTALEQKWLIRMIIKDMKL 201
Query: 175 GISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGD 234
G S+++IF FHPDA +L+NVT DL+ VC +L D + I + A +P LA + +
Sbjct: 202 GFSQQTIFSIFHPDAVELYNVTTDLEKVCIQLHDPDVCLSDVSISMFSAFKPMLAA-VAN 260
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-------------YG 281
++++ + IE K DG+R+Q+HK+G YFSR+ D+++ Y
Sbjct: 261 IQNTEKQMNHQSFFIETKLDGERMQMHKDGDVYKYFSRNGFDYTQQFGASPLEGSLTPYV 320
Query: 282 HAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAF 341
H ++ QN CILDGEM+ ++ + F + G+ +I D S+ + CY F
Sbjct: 321 HNAFRVDTQN-----CILDGEMMAYNPNTQTFMQKGNKFDIKHMVED---SEFETCYCVF 372
Query: 342 DVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHN 401
D+L + D + H++L++R+++L+++ P GR H+ + E A
Sbjct: 373 DILLLNDEKLAHETLRKRYDILKEIFIPIPGRF-----------HIVDKTE------AST 415
Query: 402 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGY 460
V E I+ R+EGI++KD S ++P R WLK+KPEY+ D LD+LIIGGY
Sbjct: 416 KKNVVDALNEAIDKREEGIMVKDPMSIYKPDKRGEGWLKIKPEYVNGLMDELDLLIIGGY 475
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
+G G RGG ++ FL +AE P P F S CRVG+G + EEL + KL P+++ Y
Sbjct: 476 WGKGSRGGMMSHFLCGVAEASGPGEKPSVFHSICRVGSGYTMEELFDLGLKLAPHWKTYR 535
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDR 580
KR PPS E+P+V+I+ P S+IL I + + S+++ +LRFPRI++
Sbjct: 536 --KRDPPSNILC---GIEKPEVFIQ-PCNSVILQIKA-AEIVSSDMYKTGCTLRFPRIEK 588
Query: 581 VRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPS 640
+R DK WH+C+ + + ++G + ++ + D+ ++ R + KK + IV S
Sbjct: 589 IREDKEWHECMTLDDLEQFRDKASG--KLASKHLDVDDEPHEKKRKTAPKLKKVIGIV-S 645
Query: 641 HFLQTDVSDIKGETSIFSDMVFCIL 665
H D+S++ E+S+F+++ FC++
Sbjct: 646 HLKAPDLSNVHHESSMFTEVEFCVM 670
>gi|397524273|ref|XP_003832125.1| PREDICTED: DNA ligase 4 isoform 5 [Pan paniscus]
Length = 844
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 222/630 (35%), Positives = 361/630 (57%), Gaps = 43/630 (6%)
Query: 49 LRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPM 107
+RLILP L+RER +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F M
Sbjct: 1 MRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHGDAGDFAM 60
Query: 108 VAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWI 164
+A VL+ R + G LTI+++NDLLD +AS+ + K + L LI +++A E KW+
Sbjct: 61 IAYFVLKPR-CLQKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLITQSSALEQKWL 119
Query: 165 IMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAV 224
I +I+KDLKLG+S+++IF FH DA +L NVT DL+ VC +L D + I + A
Sbjct: 120 IRMIIKDLKLGVSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAF 179
Query: 225 RPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH- 282
+P LA I + + + + IE K DG+R+Q+HK+G +FSR+ +++ ++G
Sbjct: 180 KPMLAA-IANIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKFFSRNGYNYTDQFGAS 238
Query: 283 ----AMSKIIEQNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL 336
+++ I D CILDGEM+ ++ + F + G+ +I + D SD Q
Sbjct: 239 STEGSLTPFIHNAFKADIQICILDGEMMAYNPNTQTFMQKGTKFDIKRMVED---SDLQT 295
Query: 337 CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
CY FDVL V + + H++L++R+E+L + P GR+E +
Sbjct: 296 CYCVFDVLMVNNKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQ--------------- 340
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVL 455
AH +EV E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+L
Sbjct: 341 --AHTKNEVIDALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDIL 398
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
I+GGY+G G RGG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y
Sbjct: 399 IVGGYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKY 458
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 575
++ + ++APPS E+P+V+IE P S+I+ I + + S+++ +LRF
Sbjct: 459 WKPFH--RKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRF 511
Query: 576 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNV 635
PRI+++R DK WH+C+ + +L ++G Y G DD+P++ R + K V
Sbjct: 512 PRIEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKRRKAAPKMKKV 570
Query: 636 SIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ H +++++ ++IF D+ FC++
Sbjct: 571 IGIIEHLKAPNLTNVNKISNIFEDVEFCVM 600
>gi|417405223|gb|JAA49329.1| Putative atp-dependent dna ligase i [Desmodus rotundus]
Length = 911
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 232/679 (34%), Positives = 374/679 (55%), Gaps = 55/679 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVD------------YFSALRLILPSLDRE 59
L S +Q+++ K FR+FLD++ D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERMQRSRGRGDKIRYFREFLDSWRKFHDALHKNQNNVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + + DA++L+N+R G +AG+F M+A VL+ R
Sbjct: 79 RDAYGIKETMLAKLYIELLNLPRGGKDALKLLNYRTPTGTHGDAGDFAMIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISVLST---LIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++ND LD +AS+ + K V + LI K +A E KW+I +I+KDLKLG
Sbjct: 138 LQKGQLTIQQVNDTLDSIASNNSARRKDLVKKSFLHLISKCSALEQKWLIRMIVKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S++++F FH DA +L NVT DL+ VC +L D + I + +P LA I D
Sbjct: 198 VSQQTVFSVFHNDAVELHNVTTDLEKVCRQLHDPSVGLSDISITLFSPFKPMLAA-IADI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G+ YFSR+ ++E +G +++ I
Sbjct: 257 ERIEKDMKNQSFYIETKLDGERMQMHKDGNVYEYFSRNGYKYTEQFGASPQEGSLTPFIH 316
Query: 290 QNVLVDR--CILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G+ +I + SD Q CY FDVL V
Sbjct: 317 NAFKTDTQICILDGEMMAYNPTTQTFMQKGNKFDIKRMVE---YSDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + H++LK+R+E+L + P GR+E + AH EV
Sbjct: 374 NKKLGHETLKKRYEILSSIFTPMPGRIEIVQKTQ-----------------AHTNKEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD++I+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVTGLMDELDIIIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE+P P F + CRVG+G + +EL + KL +++ + K+AP
Sbjct: 477 GGMMSHFLCAVAEKPPSGKKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFH--KKAP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GTEKPEVYIE-PCNSVIVQIKA-TEIVPSDMYKTGCTLRFPRIEKIREDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
WH+C+ + +L ++G K + DD P++ + + K V + H +
Sbjct: 590 WHECMTLDDLEQLRGKASGKLA-SKHFCVGGDDGPQEKKRKAAPKIKKVIGIIEHLKAPN 648
Query: 647 VSDIKGETSIFSDMVFCIL 665
+S+I ++IF D+ FC++
Sbjct: 649 LSNINKVSNIFEDVEFCVM 667
>gi|432092332|gb|ELK24952.1| DNA ligase 4 [Myotis davidii]
Length = 1021
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 235/681 (34%), Positives = 379/681 (55%), Gaps = 59/681 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQ++K A K FR+FLD++ D D ++ A+RLILP L+RE
Sbjct: 129 LCSTLERIQRSKGRADKIRHFREFLDSWRKFHDALHKNQKDVTDSFYPAMRLILPQLERE 188
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + K+ DA++L+N+R G +AG+F M+A VL+ R
Sbjct: 189 RMAYGIKETMLAKLYIELLNLPKEGKDALKLLNYRTPTGTRGDAGDFAMIAYFVLKPR-C 247
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++ND+LD +A++ + K + L LI +++A E KW+I +I+KDLKLG
Sbjct: 248 LQKGSLTIQQVNDILDSIATNNSAKRKDLIKKSLLQLITQSSALEQKWLIRMIVKDLKLG 307
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
S++++F FH DA +L NVT DL+ VC +L D + I + +P LA I D
Sbjct: 308 FSQQTVFSLFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSPFKPMLAA-IADI 366
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRS-------FLDHSEYGHAMSKII 288
+ + + IE K DG+R+Q+HK+G+ YFSR+ F D + G +++ I
Sbjct: 367 GRIEKDMKNQSFYIETKLDGERMQMHKDGNVYEYFSRNGHKFTQQFGDSPQKG-SLTPFI 425
Query: 289 EQNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYV 346
D CILDGEM+ ++ + F + G+ +I + D SD Q CY FDVL V
Sbjct: 426 HNAFRTDIQICILDGEMMAYNPNTQTFMQKGNKFDIKRMVED---SDLQTCYCVFDVLMV 482
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
+ + ++L++R+E+L ++ P GR+E + AH EV
Sbjct: 483 NNKKLGRETLRKRYEILSSILTPIPGRIEIVEKTQ-----------------AHTNKEVI 525
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGR 465
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD++I+GGY+G G
Sbjct: 526 DALNEAIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDIIIVGGYWGKGA 585
Query: 466 RGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA 525
RGG ++ FL A+AE+ A P F + CR+G+G + +EL + KL +++ + K+A
Sbjct: 586 RGGMMSHFLCAVAEKHASGEKPSVFHTLCRIGSGYTMKELYDLGLKLAKHWKPFH--KKA 643
Query: 526 PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
PPS E+P+V+IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 644 PPSSILF---GTEKPEVYIE-PCNSVIVQIKAS-EIVPSDMYKTGCTLRFPRIEKIREDK 698
Query: 586 PWHDCLDVQSFVELVHSSNGT-TQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQ 644
WH+C+ + +L ++G K GG DD+P+ + + K V + H
Sbjct: 699 EWHECMTLDDLEQLRGKASGKLASKHLSVGG--DDEPQVKKRKAPPKIKKVIGIIEHLKA 756
Query: 645 TDVSDIKGETSIFSDMVFCIL 665
++S++ ++IF D+ FC++
Sbjct: 757 PNLSNVNKVSNIFEDVEFCVM 777
>gi|66801093|ref|XP_629472.1| DNA ligase IV [Dictyostelium discoideum AX4]
gi|74850906|sp|Q54CR9.1|DNL4_DICDI RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|60462855|gb|EAL61054.1| DNA ligase IV [Dictyostelium discoideum AX4]
Length = 1088
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 223/664 (33%), Positives = 367/664 (55%), Gaps = 85/664 (12%)
Query: 15 LFNWIQKTKPAAKKRSKFRKFLDTYCDSVD-YFSALRLILPSLDRERGSYGLKESVLANC 73
L N I + K++ KF++ Y D + ++ LRLILP LD++R SYGLKE LA
Sbjct: 143 LMNRIINDTKISNKKNYLEKFMNHYKDEPNNFYQLLRLILPQLDKDRNSYGLKEKTLARL 202
Query: 74 LIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIK--ELND 131
++ L +S +S DA+RL+NW+K G+F L+ R +G + + ++N+
Sbjct: 203 YVELLNISPESVDAMRLLNWKKSTNDEIGGDFGTAVYLSLKNRCNNDNGRIKVSMGDINE 262
Query: 132 LLDRLASS-ENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAE 190
LD+L+ ++ K+S+L +++ T AQE KW + IILK++K G+S+ FHPDA
Sbjct: 263 SLDQLSQPLTDKKTKVSILKKVLRSTTAQEQKWFVRIILKEMKNGLSDNITLKFFHPDAI 322
Query: 191 DLFNVTCDLKLVC-----------EKLKDRNQRHKRQD------------------IEVG 221
D FN+T +L+LVC ++LKD+ + ++++ I++
Sbjct: 323 DHFNITSNLRLVCTNLFYMTQSKQKELKDKQKLEEKENLLKQQQQQQNDLDIYKLEIKLF 382
Query: 222 KAVRPQLAMRIGDAHAAW---RKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS 278
++P LA R + + + + V+E KFDG+RIQIHK+G ++ YFSR+ D +
Sbjct: 383 NPIKPMLANRQSIDNLSMILNSAISATQFVVEKKFDGERIQIHKDGEQVKYFSRNSNDST 442
Query: 279 E-YGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD---- 333
YG + I+++ VL +RCILDGE++VWD+ RF +FG+ + +A +DG+S
Sbjct: 443 GIYGSMFTPIVKECVLAERCILDGELIVWDSISQRFEDFGNLKTLA-LNKDGISGSGDPL 501
Query: 334 -----RQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVR 388
+QLC+ AFD+L+V D SV++ L +R LL++ V + E +
Sbjct: 502 GINYGKQLCFIAFDILFVKDQSVMNLPLMQRLMLLKRCVTIKSKQFE-----------IS 550
Query: 389 PQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-- 446
Q +++ ++ + I NR+EG++LK+L S + P +R KW+K+KPEYI
Sbjct: 551 EQT------TVNSISQIISLLESAIINREEGLMLKNLHSLYVPAERKDKWVKIKPEYIDG 604
Query: 447 --RAGSDLDVLIIGGYYGSG--RRGGEVAQFLVA---LAERPAPD-----TYPRR--FIS 492
DLD++IIGGYYGSG RRGG ++ F++ +A+ D T+ + F S
Sbjct: 605 MGNGADDLDLVIIGGYYGSGLNRRGGTISHFMLGVPFIADSTDTDIDDESTFDKNVIFYS 664
Query: 493 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII 552
FC+VG+G +D +L ++ L P++ + K PPS Q+ KE+PDVWI+ S +
Sbjct: 665 FCKVGSGYTDIQLKSLQKDLDPHWNNFSTSK--PPSIIQLAEPFKEKPDVWIDPRVYSKV 722
Query: 553 LSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELV--HSSNGTTQKG 610
L I + + + ++ + Y+LRFPR+ ++R DK W DC + ++L +S+N ++
Sbjct: 723 LQIKAS-QIVVTDKYKCGYTLRFPRVLKIRDDKGWKDCCSHEEIIDLFTNYSTNLNFKRD 781
Query: 611 KEYG 614
EYG
Sbjct: 782 HEYG 785
>gi|62859221|ref|NP_001016981.1| DNA ligase (ATP) 4 [Xenopus (Silurana) tropicalis]
gi|89271325|emb|CAJ82384.1| ligase IV, DNA, ATP-dependent [Xenopus (Silurana) tropicalis]
gi|134026052|gb|AAI35342.1| ligase IV, DNA, ATP-dependent [Xenopus (Silurana) tropicalis]
Length = 911
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 229/682 (33%), Positives = 384/682 (56%), Gaps = 63/682 (9%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY--------------CDSVDYFSALRLILPSLD 57
L +QK K +K F++F+D++ DS ++ A+RL++P L+
Sbjct: 24 LCCTLEKVQKCKNRTEKSHIFKQFVDSWRKFHEALHKSQPKTTDS--FYPAMRLVVPQLE 81
Query: 58 RERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAA-PNAGNFPMVAAEVLQRR 116
RER +YG+KE++LA I LG+ K+ DA++L+N+R ++ +AG+F +A VL+ R
Sbjct: 82 RERMAYGIKETMLAKLYIKVLGLPKEGKDAIKLLNYRSPTSSHSDAGDFAAIAYFVLKSR 141
Query: 117 QGMISGGLTIKELNDLLDRLASSENRAEKISVLST----LIKKTNAQEMKWIIMIILKDL 172
G L+I+E+N LD +A++ N A+K ++ LI T A E KW+I +I+KD+
Sbjct: 142 -CRKEGSLSIQEVNYHLDSIANN-NAAKKKELIEKSLLHLIANTTALEQKWLIRMIIKDM 199
Query: 173 KLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRI 232
KLG S++++F FHPDA +L NVT DL+ VC +L D N I + A +P LA I
Sbjct: 200 KLGFSQQTVFSIFHPDAAELHNVTTDLEKVCIQLHDPNVCLSDVSISMFSAFKPMLAA-I 258
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSK 286
+ ++++ + IE K DG+R+Q+HK+G YFSR+ D++ ++G +++
Sbjct: 259 ANIQNIEKQMNHQSFYIETKLDGERMQMHKDGDVYKYFSRNGFDYTQQFGASPLEGSLTP 318
Query: 287 IIEQ--NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVL 344
I ++ + CILDGEM+ ++ + F + G+ +I + D S+ Q CY FDVL
Sbjct: 319 YIHNAFSLNIQNCILDGEMMAYNPNTQTFMQKGNKFDIKRMVDD---SELQTCYCVFDVL 375
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
+ D + H++L++R+++LQ++ P GR H+ + E A
Sbjct: 376 LLNDQKLAHETLRKRYDILQEIFIPIPGRF-----------HIVDKTE------ASTKKN 418
Query: 405 VEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGS 463
V E I+ R+EGI++KD S ++P R WLK+KPEY+ D LD++IIGGY+G
Sbjct: 419 VVDALNEAIDKREEGIMVKDPMSIYKPDKRGEGWLKIKPEYVNGLMDELDLIIIGGYWGK 478
Query: 464 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
G RGG ++ FL +AE P P F S CRVG+G + +EL + KL P+++ Y K
Sbjct: 479 GSRGGMMSHFLCGVAEASGPGEKPSVFHSICRVGSGYTMKELFDLGLKLAPHWKTYR--K 536
Query: 524 RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 583
R PPS E+P+ +I+ P S+I+ I + + S+++ +LRFPRI+++R
Sbjct: 537 RDPPSNILC---GIEKPEAYIQ-PCNSVIVQIKA-AEIVTSDMYKTGCTLRFPRIEKIRE 591
Query: 584 DKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFL 643
DK W+DC+ + + ++G + ++ + D+ ++ R + KK + IV SH
Sbjct: 592 DKEWYDCMTLDDLEQFRDKASG--KLASKHLHIDDEPHEKKRKTAPKLKKVIGIV-SHLK 648
Query: 644 QTDVSDIKGETSIFSDMVFCIL 665
D+S++ E+S+F+++ FC++
Sbjct: 649 APDLSNVYQESSVFAEVEFCVM 670
>gi|148235991|ref|NP_001081114.1| DNA ligase (ATP) 4 [Xenopus laevis]
gi|49256305|gb|AAH74385.1| Lig4-A protein [Xenopus laevis]
Length = 911
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 231/685 (33%), Positives = 380/685 (55%), Gaps = 69/685 (10%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVD------------YFSALRLILPSLDRE 59
L IQK K +K F++F+D++ D ++ A+RL+LP L+RE
Sbjct: 24 LCCTLEKIQKCKNRTEKSHIFKQFVDSWRKFHDALHKNRPKTTDSFYPAMRLVLPQLERE 83
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAA-PNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I LG+ K+ DA++L+N+R ++ +AG+F +A VL+ R
Sbjct: 84 RMAYGIKETMLAKLYIKVLGLPKEGKDALKLLNYRTPTSSHSDAGDFAAIAYFVLKSR-C 142
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISVLST----LIKKTNAQEMKWIIMIILKDLKL 174
G L+I+E+N LD +A++ N A+K ++ LI T A E KW+I +I+KD+KL
Sbjct: 143 RKEGNLSIQEVNYHLDSIANN-NAAKKKELIEKSLLHLIANTTALEQKWLIRMIIKDMKL 201
Query: 175 GISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGD 234
G S+++IF FHPDA +L NVT DL+ VC +L D + I + A +P LA + +
Sbjct: 202 GFSQQTIFSIFHPDAVELHNVTTDLEKVCIQLHDPDVCLSDVSISMFSAFKPMLAA-VAN 260
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-------------YG 281
++++ + IE K DG+R+Q+HK+G YFSR+ D+++ Y
Sbjct: 261 IQNIEKQMNHQSFFIETKLDGERMQMHKDGDVYKYFSRNGFDYTQQFGASPLEGSLTPYV 320
Query: 282 HAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAF 341
H ++ QN CILDGEM+ ++ + F + G+ +I D S+ Q CY F
Sbjct: 321 HNAFRLDTQN-----CILDGEMMAYNPNTQTFMQKGNKFDIKHMVED---SELQTCYCVF 372
Query: 342 DVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHN 401
D+L + D + H++L++R+++L+++ P GR H+ + E A
Sbjct: 373 DILLLNDEKLAHETLRKRYDILKEIFIPIPGRF-----------HIVDKTE------AST 415
Query: 402 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGY 460
V E I+ R+EGI++KD S ++P R WLK+KPEY+ D LD+LIIGGY
Sbjct: 416 KKNVVDALNEAIDKREEGIMVKDPMSIYKPDKRGEGWLKIKPEYVNGLMDELDLLIIGGY 475
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
+G G RGG ++ FL +AE P P F S CRVG+G + +EL + KL P+++ Y
Sbjct: 476 WGKGSRGGMMSHFLCGVAEASGPGEKPSVFHSICRVGSGYTMKELFDLGLKLAPHWKTYR 535
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDR 580
KR PPS E+P+V+I+ P S+IL I + + S+++ +LRFPRI++
Sbjct: 536 --KRDPPSNILC---GIEKPEVFIQ-PCNSVILQIKA-AEIVSSDMYKTGCTLRFPRIEK 588
Query: 581 VRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPS 640
+R DK W++C+ + + ++G + ++ + D+ ++ R + KK + IV S
Sbjct: 589 IREDKEWYECMTLDDLEQFRDKASG--KLASKHLDVDDEPHEKKRKTAPKLKKVIGIV-S 645
Query: 641 HFLQTDVSDIKGETSIFSDMVFCIL 665
H D+S++ E+S+F+++ FC++
Sbjct: 646 HLKAPDLSNVHQESSMFTEVEFCVM 670
>gi|109121303|ref|XP_001084107.1| PREDICTED: DNA ligase 4-like [Macaca mulatta]
Length = 642
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 229/637 (35%), Positives = 360/637 (56%), Gaps = 55/637 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQK++ A+K FR+FLD++ D D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKSRGRAEKIRHFREFLDSWRKFHDALHKNQKDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F ++A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHGDAGDFALIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++NDLLD +AS+ + K + L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQQVNDLLDSVASNNSAKRKDLIKKSLLQLITQSSALEQKWLIRMIIKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+S+++IF FH DA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 198 VSQQTIFSVFHNDAVELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-IADI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK+G YFSR+ +++ ++G +++ I
Sbjct: 257 EHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTDQFGASPTEGSLTPFIH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D CILDGEM+ ++ + F + G +I + D SD Q CY FDVL V
Sbjct: 317 NAFKTDIQICILDGEMMAYNPNTQTFMQKGIKFDIKRMVED---SDLQTCYCVFDVLMVN 373
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ + H++L++R+E+L + GR+E + AH +EV
Sbjct: 374 NKKLGHETLRKRYEILSSIFTQIPGRIEIVQKTQ-----------------AHTKNEVID 416
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRR 466
E I+ R+EGI++K S ++P R WLK+KPEY+ D LD+LI+GGY+G G R
Sbjct: 417 ALNEAIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVTGLMDELDILIVGGYWGKGSR 476
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
GG ++ FL A+AE+P P P F + RVG+G + +EL + KL Y++ + K+AP
Sbjct: 477 GGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWKPFH--KKAP 534
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
PS E+P+V+IE P S+I+ I + + S+++ +LRFPRI+++R DK
Sbjct: 535 PSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPRIEKIREDKE 589
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQ 623
WH+C+ + +L ++G Y G DD P++
Sbjct: 590 WHECMTLDDLEQLRGKASGKLASKHLYVG-GDDGPQE 625
>gi|405978527|gb|EKC42907.1| DNA ligase 4 [Crassostrea gigas]
Length = 915
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 235/698 (33%), Positives = 368/698 (52%), Gaps = 70/698 (10%)
Query: 1 MTKTEETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSA 48
+T + L L I KT KK++ F++ + D+ D +++A
Sbjct: 12 LTVASQVSFAELCGLLEKISKTHGNEKKKAVLGTFVEKWREFHQELHKDNPDTTDSFYAA 71
Query: 49 LRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAP-NAGNFPM 107
+RL++P L+++R +YG+KE +LA LI+ L + KDSAD+ RL+N++ AA +AG+F
Sbjct: 72 MRLLVPQLEKQRAAYGIKEHMLAKLLIEVLCLGKDSADSNRLLNFKAPKAAKGDAGDFAA 131
Query: 108 VAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIK---KTNAQEMKWI 164
VA VL+ R G LTI+E+N+ LD +A++ +K V ++K +A E+KW+
Sbjct: 132 VAYFVLKNRCPE-KGTLTIQEVNNCLDGIATNNAAKKKDLVRKNILKLLTNMSAIELKWL 190
Query: 165 IMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAV 224
I +I+K+LK+G+S+ S+F +HPDAE+ +NV +L+ VC L+D++ R IE+
Sbjct: 191 IRMIVKELKVGLSQTSVFSVYHPDAEEFYNVNNNLEKVCRMLRDKSVRVHEIGIEIFSPF 250
Query: 225 RPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE----- 279
P L R + + GK +IE KFDG+RI +HK E YFSRS +++
Sbjct: 251 TPMLGERAAPDQVE-KLMDGKPYIIETKFDGERILLHKQEGEYKYFSRSGNEYTSTFGSN 309
Query: 280 -YGHAMSKIIEQ--NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL 336
Y M+ I + V CILDGEM+ +D + FA N +I +G Q
Sbjct: 310 RYDGNMTPFIHECFQSSVKSCILDGEMIGYDAATKTFATKAMNTDIKHQREEGY----QP 365
Query: 337 CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
CY+AFD++ + + +Q LKER ELL+ V K +GRL L+ H
Sbjct: 366 CYYAFDLIMLNGRVLTNQPLKERLELLKTVFKEEEGRL-------FLSKHTE-------- 410
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVL 455
A+ + + E I+ R+EGI++K S + P R G W K+KPEY+ D LDVL
Sbjct: 411 --ANTNQDCAEALNEAIDGREEGIMVKKPDSVYRPNTRKGGWFKIKPEYVGGLMDELDVL 468
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
++GG++G G R G ++ FL ALA ++P F SFC+VG+G S +EL KL +
Sbjct: 469 VVGGFFGVGHRSGMMSHFLCALAVPEEDGSHPTVFHSFCKVGSGYSKKELAEFNKKLAEH 528
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 575
++ + K+ PPS + + KE+PD +IE P+ S I+ I + I SE F ++LRF
Sbjct: 529 WKVFN--KKNPPSSIILASGFKEKPDAYIE-PKNSCIVQIKA-AEVIDSERFKTGFTLRF 584
Query: 576 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNV 635
PR+++ R DK W++C+ V E+ + G GK + R + KK
Sbjct: 585 PRVEKFRDDKAWYECMTVPEVQEMKDRAGGKLAGGK----------VELREEEEPTKKKR 634
Query: 636 SIVP--------SHFLQTDVSDIKGETSIFSDMVFCIL 665
+V + F D+SD+ + IF FC++
Sbjct: 635 KVVTHVIRPTLGAQFQAADLSDVTQTSKIFEGKEFCVI 672
>gi|330798081|ref|XP_003287084.1| hypothetical protein DICPUDRAFT_97591 [Dictyostelium purpureum]
gi|325082920|gb|EGC36387.1| hypothetical protein DICPUDRAFT_97591 [Dictyostelium purpureum]
Length = 1076
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 240/694 (34%), Positives = 363/694 (52%), Gaps = 104/694 (14%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAG 103
+YF LRL+LP +DR+R +YG+KE LA ++ L +S +S DA RL+NWRK A G
Sbjct: 153 NYFQLLRLLLPHMDRDRNTYGIKEKTLARLYVELLNISVESQDATRLLNWRKSTNADEIG 212
Query: 104 NFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKW 163
A + + + + G L++ ++N+ LDRL ++ K +L +++ + AQE KW
Sbjct: 213 GDFGSAIYLSLKNRCLEKGILSMGDINEALDRLNQVDDNKSKALILKKVLRSSTAQEQKW 272
Query: 164 IIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVC-----------EKLKDRNQR 212
+ +ILK++K+G++EK+ FHP A D ++T +L+LVC +KLKD +
Sbjct: 273 FVRLILKEMKMGLNEKTALKFFHPSAMDHLSITSNLRLVCSNLFYMSPEEQKKLKDEQKP 332
Query: 213 HKRQ---------DIEVGKAVRPQLAMR--------IGDA---HAAWRKLHGKEV---VI 249
IE A+RP LA R I D H G +I
Sbjct: 333 VTSNATVLDIHNLKIETFNAIRPMLADRKPIDYLFSILDNNPYHVPSSNGLGPSTTSYII 392
Query: 250 ECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVLVDRCILDGEMLVWDT 308
E K+DG+R QIHK+G++I ++SR+ D + YG + I+++ VL D+CILDGE++VWDT
Sbjct: 393 EKKYDGERTQIHKDGNDIRFYSRNTNDTTFIYGSLLLPIVKECVLADKCILDGELIVWDT 452
Query: 309 SLNRFAEFGSNQEIAKAARDGLSSD---------RQLCYFAFDVLYVGDTSVIHQSLKER 359
RF +FG + +A +DG+S +QLCY AFD+L+V D SV+ L +R
Sbjct: 453 VTQRFEDFGKLKTLA-LNKDGISGSGDPLGANYGKQLCYIAFDILFVKDKSVMPLPLAQR 511
Query: 360 HELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEG 419
LL++ + + E S P V EV I NR+EG
Sbjct: 512 TMLLKRCINVKDKQFEI--------SEQTP---------VSTVQEVLGQLDAAIMNREEG 554
Query: 420 IVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSG--RRGGEVAQFLVA 476
++LKDL S + P +R KW+K+KPEY+ G D D++IIGGYYGSG RRGG ++ F++
Sbjct: 555 LMLKDLNSFYVPAERKEKWIKIKPEYLDGMGDDFDLVIIGGYYGSGINRRGGTISHFMLG 614
Query: 477 LAERPAPDTYPRR-------FISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSF 529
+A P D F SFC+VG+G +DE+L + +L P++ + K PPS
Sbjct: 615 VAYCPD-DVVDEESLQEKVVFYSFCKVGSGYTDEQLKILQKELDPHWSPFNTNK--PPSC 671
Query: 530 YQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHD 589
Q+ KE+PDVWI+ + S ++ I + + +E + A Y+LRFPR+ ++R DK W D
Sbjct: 672 IQLAEPFKEKPDVWIDPRKFSKVVQIKA-AQLNPTEKYKAGYTLRFPRVLKIRDDKSWQD 730
Query: 590 CLDVQSFVELV----------------HSSNGTTQKGK--EYGGLQDDKPKQFRSSRKGE 631
C +EL +S TTQK + E G+ + S G+
Sbjct: 731 CSTFSDILELYKNFQNNDFKFKTLLNNNSIKTTTQKKRKLEINGISE------AGSGPGK 784
Query: 632 KKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
K +SI F TD S+I +IF + FC++
Sbjct: 785 LKVLSI----FQDTDTSNIVPIQNIFQGLEFCVI 814
>gi|26350485|dbj|BAC38882.1| unnamed protein product [Mus musculus]
Length = 845
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 219/631 (34%), Positives = 356/631 (56%), Gaps = 44/631 (6%)
Query: 49 LRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPM 107
+RLILP L+RER +YG+KE++LA I+ L + ++ DA +L+N+R GA +AG+F M
Sbjct: 1 MRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDAQKLLNYRTPSGARTDAGDFAM 60
Query: 108 VAAEVLQRRQGMISGGLTIKELNDLLDRLASSEN----RAEKISVLSTLIKKTNAQEMKW 163
+A VL+ R + G LTI+++N+LLD +AS+ + + L LI +++A E KW
Sbjct: 61 IAYFVLKPR-CLQKGSLTIQQVNELLDLVASNNSGKKKKDLVKKSLLQLITQSSALEQKW 119
Query: 164 IIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKA 223
+I +I+KDLKLGIS+++IF FH DA +L NVT DL+ VC +L D + I + A
Sbjct: 120 LIRMIIKDLKLGISQQTIFSIFHNDAVELHNVTTDLEKVCRQLHDPSVGLSDISITLFSA 179
Query: 224 VRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH 282
+P LA + D + + + IE K DG+R+Q+HK+G+ YFSR+ +++ ++G
Sbjct: 180 FKPMLAA-VADVERVEKDMKQQSFYIETKLDGERMQMHKDGALYRYFSRNGYNYTDQFGE 238
Query: 283 -----AMSKIIEQNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQ 335
+++ I D CILDGEM+ ++ + F + G +I + D S Q
Sbjct: 239 SPQEGSLTPFIHNAFGTDVQACILDGEMMAYNPTTQTFMQKGVKFDIKRMVED---SGLQ 295
Query: 336 LCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW 395
CY FDVL V + ++L++R+E+L P +GR+E +
Sbjct: 296 TCYSVFDVLMVNKKKLGRETLRKRYEILSSTFTPIQGRIEIVQKTQ-------------- 341
Query: 396 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDV 454
AH EV + I+ R+EGI++K S ++P R WLK+KPEY+ D LDV
Sbjct: 342 ---AHTKKEVVDALNDAIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDV 398
Query: 455 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 514
LI+GGY+G G RGG ++ FL A+AE P P P F + CRVG+G + +EL + KL
Sbjct: 399 LIVGGYWGKGSRGGMMSHFLCAVAETPPPGDRPSVFHTLCRVGSGYTMKELYDLGLKLAK 458
Query: 515 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLR 574
Y++ + K++PPS E+P+V+IE P+ S+I+ I + + S+++ +LR
Sbjct: 459 YWKPFH--KKSPPSSILC---GTEKPEVYIE-PQNSVIVQIKA-AEIVPSDMYKTGSTLR 511
Query: 575 FPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKN 634
FPRI+++R DK WH+C+ + +L ++G + G DD+P++ R + K
Sbjct: 512 FPRIEKIRDDKEWHECMTLGDLEQLRGKASGKLATKHLHVG-DDDEPREKRRKPISKTKK 570
Query: 635 VSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ H ++S++ +++F D+ FC++
Sbjct: 571 AIRIIEHLKAPNLSNVNKVSNVFEDVEFCVM 601
>gi|196002285|ref|XP_002111010.1| hypothetical protein TRIADDRAFT_50031 [Trichoplax adhaerens]
gi|190586961|gb|EDV27014.1| hypothetical protein TRIADDRAFT_50031 [Trichoplax adhaerens]
Length = 924
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 242/696 (34%), Positives = 364/696 (52%), Gaps = 66/696 (9%)
Query: 2 TKTEETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVDYFSALR 50
T +E L +L I + KK+ + FL ++ +FSA+R
Sbjct: 5 TVADEVPFFDLCTLLERISQASGKEKKKKIYSDFLSSWRTAHFKLYGKSSTEDSFFSAMR 64
Query: 51 LILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAP-NAGNFPMVA 109
L+LP +D+ER +YG+KE+ LA ID L +SK+S A +L+N+R AA +AG+F VA
Sbjct: 65 LLLPQMDKERLAYGMKETALAKYYIDILSISKESPAAQKLMNYRAPAAAKQDAGDFASVA 124
Query: 110 AEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIM 166
VL+ R G L+I ++N+ LD +A + ++ ++ V L L++ T A E KW+I
Sbjct: 125 FFVLRTRCPE-KGTLSIADVNECLDNIAMANSQRKRDDVRNNLRKLLRNTCAMEQKWLIR 183
Query: 167 IILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRP 226
+I+K+LK+G+SE SIF FHPDA DLFNV+ L VC L D + R IE+ RP
Sbjct: 184 MIMKELKVGLSENSIFSVFHPDASDLFNVSSSLSKVCSDLMDPDVRLNETSIELFVPFRP 243
Query: 227 QLAMRIGDAHAAWRKLHGKEVV-IECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMS 285
LA R KL E+ IECK DGDR+Q+HK+G++ YFSRS EY +
Sbjct: 244 MLAERCPLQQV--EKLMNHEMFYIECKADGDRMQLHKDGNKYMYFSRS---SKEYTSSFG 298
Query: 286 KIIEQ--------NVL---VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR 334
++ NV V ILDGEM+ +D + + G N ++ R S+
Sbjct: 299 ATPDEGSFTPFIVNVFSSQVQSAILDGEMVGYDMENDCYVPRGENIDVKAVGR--TSAII 356
Query: 335 QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPC 394
Q CY FD+L + + + SL ER L++V P GR+ +
Sbjct: 357 QQCYMVFDILMLNGKKLANHSLHERLGYLKQVFTPIPGRIMVVKQRQ------------- 403
Query: 395 WSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYIRAGSD-L 452
A + +V E I+ R+EGI++K+ S ++P R G W K+KPEY+ + SD L
Sbjct: 404 ----ATSKKDVLDSLNEAIDTREEGIIIKNPISTYKPDQRKGSGWFKIKPEYVDSLSDQL 459
Query: 453 DVLIIGGYYGSGRRGGEVAQFLVALAERPA-PDTYPRRFISFCRVGTGLSDEELDAVVTK 511
D+LIIGGY+G GRRGG ++ FL+ +A P P +P+ F SFC+VG+G + EL + K
Sbjct: 460 DLLIIGGYFGVGRRGGLISHFLLGVAVPPENPSEHPKVFQSFCKVGSGYTIAELKELGEK 519
Query: 512 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 571
LKPY++ PK+ PP F ++ E+PD+WIE P S I+ I + ++ F
Sbjct: 520 LKPYWKPMN-PKKLPPYFQLMS----EKPDLWIE-PIHSKIVQIKAAEIVPSTDKFKCNC 573
Query: 572 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNG--TTQKGKEYGGLQDDKPKQFRSSRK 629
+LR+PR++ VR DK W++C+D+ +L + G Q E P + R
Sbjct: 574 TLRYPRVELVREDKYWYECMDLDELDQLKSIAEGRLAYQHADETSETLMFGPSKKRQKAN 633
Query: 630 GEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ V + F D+SD+ + +FS FC++
Sbjct: 634 IRPETVCTIAPQFRTADISDV---SQVFSGKEFCVV 666
>gi|241830535|ref|XP_002414818.1| DNA ligase IV, putative [Ixodes scapularis]
gi|215509030|gb|EEC18483.1| DNA ligase IV, putative [Ixodes scapularis]
Length = 817
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 224/633 (35%), Positives = 340/633 (53%), Gaps = 51/633 (8%)
Query: 45 YFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAA-PNAG 103
+F A+RL+LP DR +YG+KE+ LA ID L + KDS DA RL++++ A
Sbjct: 69 FFPAMRLLLPQFDR---TYGIKEATLARLYIDVLALQKDSPDAQRLLHYKAPQVVRAGAA 125
Query: 104 NFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSE-------NRAEKISVLSTLIKKT 156
+F VA VL+ R G L++ E+N LLDR++++ +RA + L +L++ T
Sbjct: 126 DFASVAYLVLRHR-CPTKGSLSLAEVNALLDRVSAAHALGGPEGSRAVR-DALCSLLRNT 183
Query: 157 NAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ 216
+A E KW++ +IL+DL+ G+S ++ +HPDA+DLF+VT L VC L+D N R
Sbjct: 184 SATEQKWLVRMILRDLRTGLSTATVLSCYHPDAQDLFDVTSSLARVCRDLRDPNLRQHEA 243
Query: 217 DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLD 276
+ + VRP LA R + R+L + E KFDG+R+Q+HK G E YF+R D
Sbjct: 244 QVALFSPVRPMLAER-AEPRTVERRLAREAFFAETKFDGERLQVHKKGGEFRYFTRGSHD 302
Query: 277 HSE-YGHAMSKIIEQ-NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR 334
+S +G ++ V CILDGE++ +D F GSN ++ D S
Sbjct: 303 YSAGFGSLTNRGSSAFRSHVSNCILDGEVVAYDPVHKNFVCKGSNVDVKSLRED---SSL 359
Query: 335 QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPC 394
Q C+ AFD+L++ D V + L+ER LL + GR++ R +G
Sbjct: 360 QPCFVAFDILFLNDRVVTNCPLEERAALLDSTLTEVPGRIQI---------SRRRKGS-- 408
Query: 395 WSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLD 453
++ +F E+IE +EG+VLK + S ++P R WLKLKPEY+ + SDLD
Sbjct: 409 ------TQEDAVRFLNESIERMEEGVVLKSVSSVYKPNSRKAGWLKLKPEYVDSLVSDLD 462
Query: 454 VLIIGGYYGSGRRGGEVAQFLVALA-ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 512
+L+IGGY+G GRRGG+V+ FL+ +A + A D P F S +VG+G SD EL+ + ++L
Sbjct: 463 LLVIGGYFGEGRRGGDVSHFLLGVAGDERAEDGTPVCFWSVAKVGSGYSDSELEHLRSRL 522
Query: 513 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYS 572
P ++ Y+ R PP + KE+PD+++E P +S++L + + T RS F +
Sbjct: 523 TPKWKVYD--PRKPPERVVLAPGHKEKPDLYVE-PCESVVLQVKASELT-RSAQFRTGIT 578
Query: 573 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEK 632
LRFPR+ VRYDKPWHD L EL + G L DD S K +
Sbjct: 579 LRFPRVSAVRYDKPWHDALSFADLTELDRVAGGKLAT----TALNDDG-----SPAKRTR 629
Query: 633 KNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+V + HF D+S + ++ C++
Sbjct: 630 LSVPTIAPHFRPADLSKTATKLNVLDGKEICVV 662
>gi|390337384|ref|XP_787257.3| PREDICTED: DNA ligase 4 [Strongylocentrotus purpuratus]
Length = 929
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 239/691 (34%), Positives = 367/691 (53%), Gaps = 59/691 (8%)
Query: 2 TKTEETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCD------------SVDYFSAL 49
T + + L +QK K + K+ F++FL+ + + + +++ A+
Sbjct: 24 TVASQIPFVQLCGFLERVQKKKGSDAKKLLFKEFLEKWREFHKAMHAKNPNTTDNFYPAM 83
Query: 50 RLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVA 109
RL+LP L+RER +YG+KE LA ID G++K+S DA +L+N+R A AG+F VA
Sbjct: 84 RLLLPQLERERMAYGIKEHTLAKFYIDIFGLAKESTDAKKLLNYRAPTAKQEAGDFASVA 143
Query: 110 AEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIK---KTNAQEMKWIIM 166
VL+ R G LTIK++ND LD +A + +K V +L+K KT+A E KW I
Sbjct: 144 FFVLRNRCPE-RGSLTIKDVNDSLDSIALNNATKKKDLVKQSLLKLLRKTSAIEQKWFIR 202
Query: 167 IILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRP 226
+I+K++K+G+S++SI FHPDAEDLFNVT L VC L + R I V P
Sbjct: 203 MIMKEMKVGLSQQSILGTFHPDAEDLFNVTNSLSKVCSDLSSPSVRLNEIAISVFSPFSP 262
Query: 227 QLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH--- 282
L R R + K +IE K DG+R+Q+HK G + YFSR D+S +G
Sbjct: 263 MLGER-AKITGVERMMEHKGFLIETKLDGERMQLHKEGDKYMYFSRRSHDYSGSFGKSPM 321
Query: 283 --AMSKIIEQ--NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCY 338
+++ I N V CILDGEM +++ F G N +I K+ RD D Q+CY
Sbjct: 322 EGSLTPYIANCFNRDVHSCILDGEMCAYNSETKAFISKGENFDI-KSLRD--EEDVQVCY 378
Query: 339 FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLV 398
FDVL V DT + ++ LKER L KV +GR+ LV ++
Sbjct: 379 AVFDVLLVNDTKLANRPLKERLNYLPKVFTVIEGRM-VLVERRDASTKA----------- 426
Query: 399 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 457
EV + E I+ R+EGIV+K S + P R LK+KPEY+ D LD+LI+
Sbjct: 427 -----EVVEALNEAIDKREEGIVVKHPESTYRPDKRKVVGLKIKPEYVDNLMDELDLLIV 481
Query: 458 GGYYGSGRRGGEVAQFLVALAERPAPD-TYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 516
GGY+G G R ++ FL ALA P+ + +P+ F SFC+VG+G + +EL KL ++
Sbjct: 482 GGYFGKGYRSQLISHFLCALAVPPSREGDHPKIFYSFCKVGSGYTLQELLDFNQKLAKHW 541
Query: 517 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI-TSDIRTIRSEVFSAPYSLRF 575
+KY+ K PP + Q T +E+P++++E P+ S I+ + ++I + S V+ +LRF
Sbjct: 542 KKYD--KENPPRWLQCT---REKPELYVE-PQHSFIVQVKATEINS--SNVYRTGCTLRF 593
Query: 576 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNV 635
PR+++VR DK WH C+ + + + G + + + DD+ + + + +
Sbjct: 594 PRLEKVRDDKDWHQCMTTEEMENMRQQAEG--KLTGRHVNVDDDEIVTTKRRKATSRAVI 651
Query: 636 SI-VPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ VPS F D S++K + + CI+
Sbjct: 652 PVAVPSRFRAADTSNVKQTSEMLEGRELCIM 682
>gi|443721461|gb|ELU10753.1| hypothetical protein CAPTEDRAFT_17890 [Capitella teleta]
Length = 905
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 237/689 (34%), Positives = 359/689 (52%), Gaps = 58/689 (8%)
Query: 4 TEETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTY------------CDSVDYFSALRL 51
E+ L L + I + K+ F+ FLD + + ++ ALRL
Sbjct: 5 AEKVPFFSLCVLLDKISSKQGNENKKRLFKDFLDEWRSYHTKLHADDDATNDSFYPALRL 64
Query: 52 ILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAA 110
+LP L+RER +YG+KE +A I+ LG+ KDS A +LIN+R +AG+F VA
Sbjct: 65 LLPQLEREREAYGIKEHTMAKHFIELLGLGKDSQAAQKLINYRNPKNVKGDAGDFASVAY 124
Query: 111 EVLQRRQGMISGGLTIKELNDLLDRLAS---SENRAEKISVLSTLIKKTNAQEMKWIIMI 167
+L+ R G ++I E+ND LD++AS ++N+ L TLI+ +A+E++W+ +
Sbjct: 125 YILKPR-CPDKGTMSIAEVNDCLDKIASCNAAKNKDGLKKALMTLIRNQSARELRWLTRM 183
Query: 168 ILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQ 227
++K+LK+G+S+ SI FH DAEDL+NV L+ VC LKD + R +I V RP
Sbjct: 184 MMKELKIGLSQASILGVFHQDAEDLYNVKMSLEKVCTMLKDPSARLHELEIAVFSPFRPM 243
Query: 228 LAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDH-SEYGHA--- 283
L R H ++ K +E KFDG+R+Q+HK G E YFSR D+ S YG
Sbjct: 244 LGDR-ASPHKIETTMNNKSFFLETKFDGERMQLHKKGDEYKYFSRGGHDYTSTYGATPFD 302
Query: 284 --MSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAF 341
S I V+ CILDGEM+ ++ G +I ++D LC F
Sbjct: 303 GNFSPAISNCFKVESCILDGEMIGYNPETKTLGSKGEGFDI--KSKDIADYQPMLC--VF 358
Query: 342 DVLYVGDTSVIHQSLKERHELLQK-VVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAH 400
D+L + + ++SL+ER +L V P +GRL L+ + A
Sbjct: 359 DILAMNGKVLSNKSLRERKRILDNDVFNPLEGRLV-------LSEYKE----------AR 401
Query: 401 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGG 459
E E I+ R+EGI++KD S ++P R G W K+KPEY+ D LD++++GG
Sbjct: 402 TKQECIDALNEAIDGREEGIMVKDPDSVYKPNTRKGGWYKIKPEYVGGLMDELDLIVVGG 461
Query: 460 YYGSGRRGGEVAQFLVALAERPA-PDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 518
Y G GRR G ++ FL ALA P PD P F SFCRVG+G S +EL KL+P+++
Sbjct: 462 YMGVGRRAGLMSHFLCALAVPPEDPDDKPSVFHSFCRVGSGYSRKELFEFNQKLEPHWQM 521
Query: 519 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRI 578
Y+ K PP++ + + K+RPD I P KS IL I + S+ F + +LRFPR+
Sbjct: 522 YK--KSKPPAWLHLASGDKQRPDACIH-PSKSAILQIKA-AEITNSDQFKSGCTLRFPRV 577
Query: 579 DRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSS--RKGEKKNVS 636
+++R DK WH+C+ + +L S+G G+ ++ +P + R RK E+ +V
Sbjct: 578 EKIRMDKAWHECMSTKEMKDLRQKSDGKLA-GQLANADEEGEPSKKRRKIFRKAERPSVL 636
Query: 637 IVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
S F DVS + + + S C++
Sbjct: 637 ---SQFKGIDVSCVTKVSELLSGKELCVI 662
>gi|449669217|ref|XP_002166379.2| PREDICTED: DNA ligase 4 [Hydra magnipapillata]
Length = 891
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 239/684 (34%), Positives = 363/684 (53%), Gaps = 62/684 (9%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCD-----------SVDYFSALRLILPSLDRER 60
V + I T KK+ F+KF + + S + +R+ILP LD++R
Sbjct: 15 FVKVVEKISNTASKEKKQDIFKKFFSRWREKHKQLHGEEKTSDSLYPVIRIILPHLDKDR 74
Query: 61 GSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPN-AGNFPMVAAEVLQRRQGM 119
SYGLKE LA I+ L +SK S D + L+ ++ AG+F V L+ R
Sbjct: 75 -SYGLKEIFLAKYYIEVLNISKKSTDGINLLRYKTPKLGKQGAGDFASVVYAALKNRCPD 133
Query: 120 ISGGLTIKELNDLLDRLAS--SENRAEKI-SVLSTLIKKTNAQEMKWIIMIILKDLKLGI 176
G TI ++N+ LD +AS SE R + + + + +I+ A E KWII I+LK+++LG+
Sbjct: 134 -KGRFTIADVNECLDIIASANSEKRRDLVKNEIKKMIQNCCALEQKWIIRILLKEIRLGM 192
Query: 177 SEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAH 236
SE +I FHPDA +L+N++ L VC L D+N +++I + RP L MR
Sbjct: 193 SENTILPLFHPDALELYNISNSLHKVCLDLHDQNITLNKKNIMLMSPFRPMLGMR-STID 251
Query: 237 AAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE------YGHAMSKIIEQ 290
+ L E IE K DG+RIQ+HKNG + YFSR+ D+SE Y +++ I
Sbjct: 252 NIVKVLKHSEFFIETKIDGERIQLHKNGEQYAYFSRNAYDYSEIFGCTKYSGTLTQYINM 311
Query: 291 NVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGD 348
D CILDGEM+V+ N F GSN ++ GL Q C+ FDVL + D
Sbjct: 312 LFKTDIKTCILDGEMVVYCVETNSFMLKGSNVDVKAQLPSGL----QPCFVVFDVLMIND 367
Query: 349 TSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKF 408
+ + SLK+R L + GR+E + G N E + V + +D+ E
Sbjct: 368 IELANISLKDRISKLVSIFDVMPGRIEVVDRKIGRNK------EDIINAVNNAIDKCE-- 419
Query: 409 FKETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYIRAGS-DLDVLIIGGYYGSGRR 466
EGIV+KD S + P R+G W KLKPEYI + S DLD++IIGG YGSG R
Sbjct: 420 ---------EGIVVKDPLSLYVPNKRNGSGWYKLKPEYIDSLSDDLDLIIIGGQYGSGHR 470
Query: 467 GGEVAQFL--VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 524
GG ++ FL VA+ DT P F +F VG+G +D+EL ++ +KL Y++K++ +
Sbjct: 471 GGIISHFLLGVAVKTEEGSDTKPSYFKTFAAVGSGYTDKELSSLCSKLDKYWQKFDLKRL 530
Query: 525 APPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYD 584
PS + T+ KE+PDVWIE P+KS+I+ + + I ++ ++ Y+LRFPR++R RYD
Sbjct: 531 --PSMIEFTSGCKEKPDVWIE-PDKSVIVQVKA-AEIIVTDKYAFGYTLRFPRLERFRYD 586
Query: 585 KPWHDCLDVQSFVELVHSSNG--TTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI-VPSH 641
K W+DC+ + ++L ++ G T++ + +K K+ R + + + +
Sbjct: 587 KSWYDCMTTEDIIDLQKAACGKLTSKHIESESSTTSNKKKR----RLDDHVDFPVAIGKQ 642
Query: 642 FLQTDVSDIKGETSIFSDMVFCIL 665
F DVS+I +S F FC++
Sbjct: 643 FKAADVSNINESSSAFKGKEFCVI 666
>gi|427784439|gb|JAA57671.1| Putative dna ligase [Rhipicephalus pulchellus]
Length = 890
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 224/638 (35%), Positives = 345/638 (54%), Gaps = 45/638 (7%)
Query: 45 YFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAA-PNAG 103
+F A+RL+LP LDR+R +YG+KE+ LA ID L + K+S DA +L+ +R A AG
Sbjct: 65 FFPAMRLLLPHLDRDRPAYGIKEATLAKLYIDVLALGKESPDAQKLLRYRTPHVAKAEAG 124
Query: 104 NFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLA------SSENRAEKISVLSTLIKKTN 157
+F VA VL+ R G LT+ E+N+LLD ++ +E L TL+++T+
Sbjct: 125 DFASVAYLVLRNR-CPTKGSLTVAEINELLDEVSDAHAHGGAEGSRRTRDALCTLLRRTS 183
Query: 158 AQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD 217
A E KW++ +ILK++K+G+SE SI +HPDA+D+F+ + L VC +LKD R
Sbjct: 184 AAEQKWLVRMILKEMKMGMSEGSILSCYHPDAQDVFDNSSSLLKVCRELKDPKVRQHVVQ 243
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDH 277
+ + AVRP LA R + + R L+ + E KFDG+R+Q+HK+GSE YF+R D+
Sbjct: 244 VSLFHAVRPMLAER-AEPRSVERLLNHEPFFAETKFDGERLQVHKDGSEFRYFTRRSHDY 302
Query: 278 SE-YGH-----AMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
S +G ++++ I ++ V CILDGE++ +D +R GS+ ++ +
Sbjct: 303 SSGFGATADEGSLTQYIAKSFQSHVKSCILDGEVIGYDPRSDRLVSKGSHVDVKSLTEN- 361
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
S Q C+ AFD+L + V ++ L+ER LL + + GR ++ N R
Sbjct: 362 --SSLQPCFVAFDILLLNGQVVTNKPLQERVLLLDQALVEVPGR---ILISRRQNGSTR- 415
Query: 390 QGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RA 448
++ + IE ++EGIVLK L S ++P R WLKLKPEY+
Sbjct: 416 -------------EDAVRLLNRAIEEQEEGIVLKRLSSVYKPNARKAGWLKLKPEYVDNL 462
Query: 449 GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDT-YPRRFISFCRVGTGLSDEELDA 507
SDLD+LI+GGY+G GRR G V+ FL+ +A D P F S +VG+G S +ELD
Sbjct: 463 VSDLDMLILGGYFGEGRRSGVVSHFLLGVASGDQDDDGTPHTFWSVAKVGSGYSLQELDD 522
Query: 508 VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVF 567
++ KL ++ Y+ PK+ PP + KE+PD+++E P S++L I + +RS F
Sbjct: 523 LLAKLTSKWKVYD-PKK-PPEKLVLAPGHKEKPDLYLE-PSDSVVLQIKAS-ELVRSSQF 578
Query: 568 SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSS 627
+LRFPR+ +R+DKPW D L EL ++ G G ++D +
Sbjct: 579 RTGITLRFPRVAAIRHDKPWQDVLSYSELCELEKAAGGKLATAT-LGHDENDGGSPAKKR 637
Query: 628 RKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
R G S+ +HF ++S + +I CIL
Sbjct: 638 RVGASVKASL-GTHFQPANLSGAAKKCTILKGKEICIL 674
>gi|281207702|gb|EFA81882.1| DNA ligase IV [Polysphondylium pallidum PN500]
Length = 1051
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 222/670 (33%), Positives = 358/670 (53%), Gaps = 49/670 (7%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVL 70
+ L + + + K+S F + Y D + F +RL LP LD++R YGLKE L
Sbjct: 145 IFCELLDRLTQVTKHTDKKSLLTTFFNNYKDKDNLFPIIRLFLPQLDKDRQVYGLKEKTL 204
Query: 71 ANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELN 130
A ++ LG++ +S DA+RLINW++ G+F L+ R + G ++I ++N
Sbjct: 205 AKFYVEMLGIAPNSIDAIRLINWKRSTTNEIGGDFGNAVFLSLKNR-CLEKGRISIADIN 263
Query: 131 DLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAE 190
LD+L ++++ EK +L L++ T A E KW + I+LK++K G+SEK I + HPDA
Sbjct: 264 ITLDQLIVTDDKREKQRLLKRLLRHTTATEQKWFVRIVLKEMKTGLSEKMILNFLHPDAM 323
Query: 191 DLFNVTCDLKLVCEKLK--DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVV 248
+LFN T L+ VC+ +K R + + I +G+ ++P LA R + + +
Sbjct: 324 NLFNHTSSLRRVCQDIKGSGRPLDYDGKTILIGQPIKPMLADR-KPLETVLNAIEEESFI 382
Query: 249 IECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVLVDRCILDGEMLVWD 307
+E K+DG+RIQIHK +I +SR+ D + Y ++ II++ V V+ CI+DGE+LVWD
Sbjct: 383 VETKYDGERIQIHKQNDKIKLYSRNSNDCTHIYSKLLNPIIKECVTVENCIIDGELLVWD 442
Query: 308 TSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKV 366
T + R+ EFG + +A D + +QLC+ AFDVLYVGD SV+ L +R+ +L++
Sbjct: 443 TIVQRYEEFGKLKTLALNQTVDNVG--KQLCFIAFDVLYVGDKSVVELPLSQRYAILKRC 500
Query: 367 VKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG 426
+ + E V +H V + E+ + I R+EGI++K L
Sbjct: 501 ISAKSHQFE--VSEHR---------------VCSSKQEIVQLLDAAILAREEGIMVKRLD 543
Query: 427 SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI--IGGYYGSGRRGGEVAQFLVALAERPAP 483
S + PG+R KW+KLKPEY+ G DLD++I G GRRGG ++ F++ + E
Sbjct: 544 SVYTPGERRDKWIKLKPEYLDGVGDDLDLVIVGGYYGSGVGRRGGTISHFILGVPELLEQ 603
Query: 484 DTYPRR-------FISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNS 536
+ F SFC+VG+G +D EL + +L P+++K P Q
Sbjct: 604 QEGEEQQQKQLVTFKSFCKVGSGYTDSELRTLQERLTPHWQK------RPLGNVQF---G 654
Query: 537 KERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSF 596
ERPDV+I+ P S +L I + + + +E + ++LRFPR+ ++R DK W +CLD
Sbjct: 655 TERPDVYID-PTASFVLQIKA-AQIVITEKYKVGFTLRFPRVVKIRDDKQWSECLDEAGV 712
Query: 597 VELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI-VPSHFLQTDVSDIKGETS 655
+ L + G K K +QD K + R + +K I V F TD + + ++
Sbjct: 713 ISLANEYEGRYAKRK--IEIQDGKSTKKRRTSTTKKPKKKIGVLQCFEDTDTTGVVKQSG 770
Query: 656 IFSDMVFCIL 665
+F + FC++
Sbjct: 771 LFEGLEFCVV 780
>gi|320170076|gb|EFW46975.1| ATP dependent DNA ligase [Capsaspora owczarzaki ATCC 30864]
Length = 1199
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 231/645 (35%), Positives = 343/645 (53%), Gaps = 60/645 (9%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAA-PNAGN 104
F +RL+LPS DRERG YG+K+++LA D LG+ + S D +L N+ K +AG+
Sbjct: 166 FPIVRLLLPSFDRERGMYGIKDAMLAKYYSDILGIVRGSEDYNKLKNYTKPQHNRQSAGD 225
Query: 105 FPMVAAEVLQRRQG-MISGGLTIKELNDLLDRLAS---SENRAEKISVLSTLIKKTNAQE 160
F MVA VLQRR S LT+ ++N LLD+LA+ S NR L +++ ++ A+E
Sbjct: 226 FAMVAFFVLQRRLADRPSNPLTVTDVNTLLDQLATEYMSNNRPGVKDTLRSMLFRSTARE 285
Query: 161 MKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEV 220
KW+I II KD+K G+S +++ FH DA DLFNV +L+ VC +L+D +R D+ +
Sbjct: 286 QKWLIRIIGKDVKCGMSAQTVLKTFHQDAVDLFNVCSNLRRVCWQLRDPTKRLVSNDVSL 345
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE- 279
RP LAMR + A KL +E KFDGDR+ +HK G + Y+SR +++S+
Sbjct: 346 FHPFRPMLAMRENISKIA-DKL--GTFFMEIKFDGDRVMMHKQGDKYQYWSRKSINYSDK 402
Query: 280 YGHAM-SKIIEQNVL------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSS 332
YG + I Q V V ILDGEM+++DT L+ F S + A D
Sbjct: 403 YGFSPDCGTITQYVHNAFKPGVTDVILDGEMILYDTKLDCFVPKSSADVKSFAGTD---- 458
Query: 333 DRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGE 392
+++ CY FD++++ TS+ + L ER L+KV P GR+ G S
Sbjct: 459 EQRPCYVVFDIVFLNGTSLCNMPLIERLRTLRKVFTPITGRIMFADQRTGTTSQ------ 512
Query: 393 PCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDL 452
E+ F E I+NR+EG+++K++ S + P R G W K+KPEY + ++L
Sbjct: 513 -----------EIIDFLNEAIDNREEGVMVKNMKSTYAPDKRDGGWYKIKPEYGDSFAEL 561
Query: 453 DVLIIGGYYGSG-RRGGEVAQFLVALAERPA-PDTYPRRFISFCRVGTGLSDEELDAVVT 510
DVLI+GGYYG G RRGG V+ F+ A+A PA P P F SFC+VGTG S +L
Sbjct: 562 DVLIVGGYYGIGKRRGGMVSHFMCAVAVPPANPQEPPTVFHSFCKVGTGYSMSQLKEFGE 621
Query: 511 KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 570
+L+P++ ++ + PPS + KERPDVWIE P S I+ I + +E +
Sbjct: 622 QLEPHWHPFD--TQNPPSQILLATGFKERPDVWIE-PRHSRIVQIRA-AEITPTEKYKCG 677
Query: 571 YSLRFPRIDRVRYDKPWHDCLDV----------QSFVELVHSSNGTTQKGKEYGGLQDDK 620
++LRFPR++ R DK W DC+ Q + H +G +KG K
Sbjct: 678 FTLRFPRLECFRTDKEWSDCMTTTELDHAYRVGQGRLATTHFLSGDGEKGGR-------K 730
Query: 621 PKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
K + V + F D+S +K ++ +F + F ++
Sbjct: 731 QKAGGAGVAAGTSKTRTVLASFRGADLSGVKIDSELFQGLTFYVV 775
>gi|47216720|emb|CAG00994.1| unnamed protein product [Tetraodon nigroviridis]
Length = 896
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 218/638 (34%), Positives = 353/638 (55%), Gaps = 57/638 (8%)
Query: 45 YFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPN-AG 103
++ A+RL++P +RER +YG+KES+LA ID LG+ K+ +A +L+N+R + AG
Sbjct: 60 FYPAMRLLVPQFERERMAYGIKESMLAKLYIDVLGLPKNGPEANKLLNYRAPTTSQGEAG 119
Query: 104 NFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQE 160
+F VA VL++R G L +KE+ND LD +A + +K V L LI ++A E
Sbjct: 120 DFASVAYFVLKKR-CTSQGSLRVKEVNDFLDSVAINNANKKKDLVKKSLLHLITHSSALE 178
Query: 161 MKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEV 220
KW+I +ILKD+KLG+S++++ FHPD+ DL+NV DL VC++L D + IE+
Sbjct: 179 QKWLIRMILKDMKLGVSKETVLQVFHPDSPDLYNVNTDLNKVCQQLHDPSVSLSDVSIEL 238
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-E 279
A +P LA + + + +++ I+ K DG+RIQ+HK+G YFSR+ +++ +
Sbjct: 239 FSAFKPMLAA-VANIRSVEKQMGNSLFYIQTKLDGERIQLHKDGDVYKYFSRNAFEYTQQ 297
Query: 280 YGHA---------MSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGL 330
+G + + + + NV+ CILDGEM+ ++ + + GS +I K D
Sbjct: 298 FGGSPLQGSLTPYIHNVFQSNVV--NCILDGEMMAYNPTTETLTQKGSKFDIKKLMDD-- 353
Query: 331 SSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQ 390
S+ Q C+ FDVL V D + + LK+R+E LQ V P KGR+ H+ +
Sbjct: 354 -SELQTCFCVFDVLLVNDRKLGKEPLKKRYEALQTVFTPVKGRI-----------HLVSK 401
Query: 391 GEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS 450
+ A + EV K E I++R+EGI++KD S ++P R WLK+KPEY+
Sbjct: 402 SD------ARSTQEVVKALNEAIDSREEGIMVKDPLSIYKPDKRGEGWLKIKPEYVDGLM 455
Query: 451 D-LDVLIIGGYYG--SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA 507
D LD+LI+GGY+G S RR V L P P P F + CR+G+G + +EL
Sbjct: 456 DELDLLIVGGYWGKRSARRDD------VPLPA-PKPGEKPSVFHTLCRIGSGYTMKELYD 508
Query: 508 VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVF 567
+ KL +++ + K PP+ E+P+V+IE P S+I+ + + + S+++
Sbjct: 509 LGLKLAKHWKVFR--KSDPPASILC---GTEKPEVYIE-PRNSVIIQVKA-AEIVSSDMY 561
Query: 568 SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSS 627
+LRFPRI+R+R DK WH+C+ + + ++G + + + DD P++ +
Sbjct: 562 KTSCTLRFPRIERIREDKEWHECMTLAQLEQFRGKASG--KLASRHLLMDDDDPQKKKRR 619
Query: 628 RKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ K + HF D+S ++ ET +F D+ FCIL
Sbjct: 620 VPFKPKKAVGLLEHFKAQDLSGVRKETDMFEDVEFCIL 657
>gi|290990672|ref|XP_002677960.1| ATP-dependent DNA ligase IV [Naegleria gruberi]
gi|284091570|gb|EFC45216.1| ATP-dependent DNA ligase IV [Naegleria gruberi]
Length = 1059
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 230/693 (33%), Positives = 350/693 (50%), Gaps = 64/693 (9%)
Query: 8 EVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKE 67
+ L F + + +K++ F K C S D F +RL+LP LDRER +YGLKE
Sbjct: 146 QFATLCKYFEKLSENNKHKEKKAIFDKIF-VSCRS-DLFQFMRLLLPQLDRERLTYGLKE 203
Query: 68 SVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIK 127
S +A I+ L + + DA+RL W K + +F + +VLQ+R S LT+
Sbjct: 204 SKIAKYYIEILALPQTCEDALRLKKW-KDPSKGTGNSFSDICFQVLQKRGWSSSKNLTVF 262
Query: 128 ELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHP 187
+N+ L L+ + + +K +L ++K T+ E KWI+ IILKDL++G +I + FHP
Sbjct: 263 FINEKLTELSMAGDNDKKKKILLDILKSTSCFEQKWILRIILKDLRIGTQHTTILNHFHP 322
Query: 188 DAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEV 247
+A +LFN DL+ V K D + ++ V +P LA + A A L E
Sbjct: 323 NALELFNSCTDLREVITKCLDPKFKFTTAELRVFSMFKPMLASLLHPAKLA-ETLSSDEY 381
Query: 248 VIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVLVDRCILDGEMLVW 306
VIE K+DG+RI +HK SEI +F+R+ D++ YG S II N+ CILDGE L+W
Sbjct: 382 VIEPKYDGERILVHKKESEIMFFTRNGKDYTSLYGPKFSPIIRNNIKAKVCILDGEFLIW 441
Query: 307 DTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKV 366
+T L F EFG N+ A D ++ Q CY FD++Y+ D + LK+R L+ +
Sbjct: 442 NTELEAFKEFGHNR--THALNDTSDTNEQFCYMVFDLVYLKDKDLSQYPLKKRRTYLENI 499
Query: 367 VKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG 426
+ LE LVP ++S EV + I NRDEGI+LK G
Sbjct: 500 INLQSHVLE-LVPQTPVSSE----------------KEVYEQLDIAIMNRDEGIMLKPTG 542
Query: 427 SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERP---- 481
+ PG+R KW+KLKP+++ G LDV+I+GG+YG+ + V+ FL+A+A R
Sbjct: 543 GVYIPGER--KWIKLKPDHVDGMGETLDVIIVGGFYGTKFKRKSVSHFLLAVATRSKHSL 600
Query: 482 ----APDTYPRR---------FISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
A D F SFC+VG+G ++ EL A+ L+ +++ ++ K P
Sbjct: 601 GNTDALDNLDEENEASNENQVFHSFCKVGSGYTNIELLALQKDLESHWKPFD--KTKLPK 658
Query: 529 FY-QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 587
FY Q + E PDV+IE P+ S IL I S F +LRFPR+ +R DK W
Sbjct: 659 FYGQWIPGAGEMPDVYIE-PKHSKILEIKG-YSFQESTKFKTGVTLRFPRVVSIRNDKDW 716
Query: 588 HDCLDVQSFVELVHSSNGTTQKGK--------EYGGLQDDKPKQFRSSRKG-------EK 632
++CLD+Q E++ S K + + ++ K K+ + G +
Sbjct: 717 NECLDLQGLEEMIEISRNGNHKRRAANMDSVVSHNDIKKQKRKKMVQNPDGTFTEVEPKS 776
Query: 633 KNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ + SHF D+S + +S+F + F +
Sbjct: 777 RKATAAVSHFFDYDMSKLDKTSSLFKGLEFVVF 809
>gi|198419782|ref|XP_002131274.1| PREDICTED: similar to DNA ligase IV [Ciona intestinalis]
Length = 632
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 216/620 (34%), Positives = 338/620 (54%), Gaps = 54/620 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCD---------SVD-YFSALRLILPSLDRERG 61
L LF+ I K K A +R + + F+ + + +D + A+RLILP LD+ER
Sbjct: 32 LCILFDKIYKAKSNAVRRQELKLFISKWRELQTKFHQPGKIDTLYPAIRLILPQLDKERV 91
Query: 62 SYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGA-APNAGNFPMVAAEVLQRRQGMI 120
SYGLKE +LA +D +G+S+ DA +L+ +R + NAG+F A + L ++ +
Sbjct: 92 SYGLKEVLLARLYVDVMGLSRTGKDAKKLLEFRNPKVNSSNAGDFAETAYKQLLSKRCID 151
Query: 121 SGGLTIKELNDLLDRLA--SSENRAEKI-SVLSTLIKKTNAQEMKWIIMIILKDLKLGIS 177
G L I E+N LD++A SSE + E + LI+KT+ E KW+I IILKD+KL +
Sbjct: 152 KGSLKISEINLYLDKIAVQSSEKKKEMVRKTFLELIQKTSGVEQKWMIRIILKDMKLRMG 211
Query: 178 EKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHA 237
+K I E HPDAE++FNVT LK VCE+L D + R +I++ + RP LA+ +
Sbjct: 212 QKVILEEIHPDAEEVFNVTSSLKQVCERLNDPDVRLADTEIQLFQPFRPMLALN-ANITE 270
Query: 238 AWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE------YGHAMSKIIEQ- 290
+ L + IE K+DG+R Q+HK G+ YFSRS ++S Y ++ I
Sbjct: 271 VEKLLGNQPFKIEIKYDGERSQLHKEGNRYKYFSRSGREYSTVFGETPYTGTLTPFIYGC 330
Query: 291 -NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDT 349
+ V CILDGEM+ +D LN F + G +I D S+ Q C+ FD+L +
Sbjct: 331 FHESVSSCILDGEMMGFDPQLNIFMQKGGKFDIKHITED---SELQPCFVVFDILLLNQE 387
Query: 350 SVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFF 409
+ + ER +L K+++P +GR+ H+ E A + EV
Sbjct: 388 RLTSKPQSERFKLFNKLIQPLEGRM-----------HLTEAKE------ASSNQEVMSSL 430
Query: 410 KETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYIRA-GSDLDVLIIGGYYGSGRRG 467
+ I+ R+EGI++K+ +K+ P R G W K+KPEY+ DLD++IIG +G+GR G
Sbjct: 431 NDAIDRREEGIIVKNPNAKYFPNKRKGSGWFKIKPEYVGGVVDDLDLVIIGATFGTGRHG 490
Query: 468 GEVAQFLVALAERPAPDTY--PRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA 525
++ F + + R + D+ PR F S CR+G+G +D++L +V KLK + ++ K+
Sbjct: 491 NMLSMFHLGVGVRDSEDSSDPPRVFKSLCRIGSGYTDKQLLQLVDKLKNKLKVFD--KKK 548
Query: 526 PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
P + +VT KE+PDV+I P S+++ + + I S ++A +LRFPR+ +R DK
Sbjct: 549 HPDWLKVT---KEKPDVYIH-PCDSLVVQVRA-TEIISSSSYAAHCTLRFPRLIAIREDK 603
Query: 586 PWHDCLDVQSFVELVHSSNG 605
+ D LD L ++G
Sbjct: 604 TYLDALDTSQLDNLRSIADG 623
>gi|321464185|gb|EFX75195.1| hypothetical protein DAPPUDRAFT_323605 [Daphnia pulex]
Length = 845
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 214/633 (33%), Positives = 336/633 (53%), Gaps = 47/633 (7%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPN-AGN 104
+S + L+LP LDR RG+YG+KE+ LA I+ + KD DA+RL+ ++ A +
Sbjct: 2 YSVMCLLLPHLDRSRGAYGIKEASLAKLYINIFSLPKDGVDAIRLLKYKVPKTTQRIAKD 61
Query: 105 FPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKIS--VLSTLIKKTNAQEMK 162
F V ++L+ R G TI ++N LD L+ + ++ + + +L ++ K +A E K
Sbjct: 62 FSDVCYDILKDRCGSSISSGTIADINLFLDNLSKTSSKKTENTERILKPILMKLSALEQK 121
Query: 163 WIIMIILKDLKL-GISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVG 221
W+I +IL+++KL G+SEK++ +HPDA++L++V+ DL+ VC L D R +I +
Sbjct: 122 WLIRVILRNVKLTGMSEKAVLSTYHPDAKELYDVSNDLEKVCATLIDPLNRTSGIEISLF 181
Query: 222 KAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDH-SEY 280
RP LA R+ + K++ K +E K DG+R QIHK G +++R D+ S Y
Sbjct: 182 NPFRPMLADRLSISKIL-TKMNNKPFYVETKLDGERTQIHKRGKRYGFYTRRGFDYTSSY 240
Query: 281 GHAMSKIIEQNVL-------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD 333
G S L V CILDGEM+ W+ + + G+N ++ + G +
Sbjct: 241 GTDSSTGNFTPRLHDCFPESVTSCILDGEMVAWNVNGSFIVSKGANTDVKSMSPTG---E 297
Query: 334 RQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEP 393
C+ AFD+L + D + + KER + L+ VK + L P+ L S
Sbjct: 298 LVPCFVAFDILLLNDEVLSNLPYKERLKFLESTVKVKESVLH--FPNRKLVS-------- 347
Query: 394 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-L 452
EVE E I+ R+EGIVLK S ++P +R G W+K+KPEY+ D L
Sbjct: 348 -------TKAEVENLLNEAIDQREEGIVLKSPDSIYKPNERKGGWVKVKPEYVGDMMDHL 400
Query: 453 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 512
DV+I+GGY+G GRR ++ FL+ LA P+ + F SF RVG+G SDE+L ++ KL
Sbjct: 401 DVIILGGYHGQGRRRNLISMFLLGLAV-PSIEGNQLEFYSFARVGSGFSDEQLMGLLGKL 459
Query: 513 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYS 572
PY++K++ K APP +E+PDVWI +P S IL I + + S + A +
Sbjct: 460 DPYWQKWD--KNAPPPMIHF---GREKPDVWI-NPSSSAILEIKAS-EIVLSNSYKAGMT 512
Query: 573 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEK 632
LRFPR+ R+R D+ W C+ + +E+ ++G + + +D P R G
Sbjct: 513 LRFPRVQRIREDRAWDSCMTLSEVIEMRKYASG--KLATRHCSFTEDTPASKRIKLAGL- 569
Query: 633 KNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
++V + F D SD+K +S FS C+L
Sbjct: 570 --TAVVAAPFQSADTSDVKKSSSCFSKKEICVL 600
>gi|340369284|ref|XP_003383178.1| PREDICTED: DNA ligase 4-like [Amphimedon queenslandica]
Length = 942
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 231/694 (33%), Positives = 353/694 (50%), Gaps = 71/694 (10%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVD------------YFSALRLILPSLDRE 59
L IQ +K++ +F+ + D+ + ++ A+RL+LP LDR+
Sbjct: 33 FCGLLERIQSLSGTERKKTSLDRFIKQWRDTHNKLHLPGTIHSDSFYPAMRLLLPYLDRQ 92
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAP-NAGNFPMVAAEVLQRRQG 118
R +YGLKE LA ID L ++KDS DA +L+N+R AA +A +F VA VL+ R
Sbjct: 93 RPAYGLKEVSLAKQYIDILKIAKDSPDAKKLLNYRTPHAAKHDATDFAGVAYFVLRNRCP 152
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
G L+++++N LD LA S ++ V L L++ T+AQE KW+I II+K+LK+G
Sbjct: 153 E-KGSLSMEQVNQCLDELALSNVTKDRGGVKKSLQHLLRNTSAQEQKWLIRIIMKELKIG 211
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+SE SI FHPD +DLF+VT +L+ VC L R I RP L R
Sbjct: 212 LSENSILTVFHPDGQDLFSVTSNLEKVCVDLHSPTVRLNEAAISYFTPFRPMLGQR-ATI 270
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDH------SEYGHAMSKIIE 289
+ + + IE KFDG+RIQ+HK + Y+SRS ++ +E + + I
Sbjct: 271 DQVVKLMDHQPFFIENKFDGERIQLHKQHGQYRYYSRSSREYTSTFGGTEREGSFTPNIH 330
Query: 290 Q--NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAA-----RDGLSSDRQLCYFAFD 342
+ N V CILDGEM+ WD + G N ++ A G + Q C+ FD
Sbjct: 331 KAFNSKVHSCILDGEMVGWDKETESYLPKGENVDVKTLAPVSEGGGGGENGVQPCFVVFD 390
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
L + +T++ + L+ER E L KV + G L H
Sbjct: 391 ALMINETNLANCPLRERVEHLNKVFEVVPGCL-------------------------HKA 425
Query: 403 DEVEKFFK--------ETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYI-RAGSDL 452
+ +E+ K E I+ R+EG+V+K S ++P R G WLK+KP+Y+ DL
Sbjct: 426 ERIERSTKEDVILSLNEAIDRREEGLVIKQPSSLYKPDKRKGSGWLKIKPDYVDSLSDDL 485
Query: 453 DVLIIGGYYGSGRRGGEVAQFLVALAERPA-PDTYPRRFISFCRVGTGLSDEELDAVVTK 511
D+LIIGGY+G GRR G ++ F+ +A PA P F SFC+VG+G + EL + K
Sbjct: 486 DLLIIGGYFGVGRRAGMISHFMCGVAVPPAIKGDKPTVFHSFCKVGSGYTMNELRELGHK 545
Query: 512 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 571
LKP++RK++ + PP + KE+PD+WIE + I+ ++I I S+ +
Sbjct: 546 LKPHWRKFD--TKRPPESVILAPGFKEKPDLWIEPKDAKIVQIRAAEI--IVSDKYRTGC 601
Query: 572 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGE 631
+LRFPR++RVR DK W DC+ + +L ++G G ++ + R
Sbjct: 602 TLRFPRLERVREDKEWFDCMSLDELEDLKRVASGHLAHRHYEEGEGEELTTSKKRRRVTR 661
Query: 632 KKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ V S F TDVS ++ +S+F+ FC++
Sbjct: 662 IDRPAGVASQFRHTDVSSVEEVSSMFAGKQFCVI 695
>gi|328721431|ref|XP_001946729.2| PREDICTED: DNA ligase 4-like [Acyrthosiphon pisum]
Length = 889
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 210/640 (32%), Positives = 349/640 (54%), Gaps = 61/640 (9%)
Query: 45 YFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWR-KGGAAPNAG 103
++ LRL+LP D++RG+YG+KE+ L + L ++KDS DA +L+N+R + AG
Sbjct: 59 FYPVLRLLLPVSDKQRGAYGVKEAALGKLYVKILCLAKDSPDAQKLLNFRVPKVSGSTAG 118
Query: 104 NFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLA----SSENRAEKISVLSTLIKKTNAQ 159
+F V++ R +G ++I ++N +LD +A ++E+R E +L +++ K +A
Sbjct: 119 DFAETLYWVIRSRFED-NGSMSIADINQILDEIAMKHATNESR-EVEQILQSMLLKLSAN 176
Query: 160 EMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIE 219
E KW+I ++LKD++LGI+ I +H DA DL++V DLK VC+ L + + +
Sbjct: 177 EQKWLIRLLLKDMRLGIAHTKILKAYHDDANDLYDVCNDLKKVCKMLNNPSVVLHEISVN 236
Query: 220 VGKAVRPQLAMR--IGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFL 275
+ + P L+ R I D + + +++ ++ K DG+R Q+H K + YFSR
Sbjct: 237 LFEPFCPMLSQRCEITDDSKINKMVKNEDLFVDIKLDGERFQLHWSKEKNIFKYFSRRGN 296
Query: 276 DHSE-YGHAMSKIIEQNVL-------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR 327
D+++ YG I VL V CILDGEM+ ++T F+ N ++ K
Sbjct: 297 DYTDTYGCNDVNGILSPVLAKQFKSDVKNCILDGEMMCYNTKYKSFSTKAMNIDVKKLR- 355
Query: 328 DGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHV 387
+ + Q C+ FD++Y D + + L++R ++L + +P +G + H
Sbjct: 356 --IGNTHQPCFCVFDIVYYNDRVITNLPLEKRLDILNTIFEPLEG-----IFVHTTRHKA 408
Query: 388 RPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIR 447
R +E+ K+ + I+N +EGIV+KD S ++P R+ W K+KPEY
Sbjct: 409 RK-------------NELMKYLNDAIDNHEEGIVVKDPLSIYKPNSRNAGWYKIKPEYTD 455
Query: 448 -AGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 506
A +LD+LIIGG+YG G++ G V+ FL+ L E+ D + + RV +G S EEL
Sbjct: 456 GALIELDLLIIGGFYGEGKKRGVVSHFLMGLLEK---DGESFKCSAISRVSSGFSTEELA 512
Query: 507 AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEV 566
+ KL ++++ YP + PP+ KE+PD+WIE PE S+I+ + + + S +
Sbjct: 513 DLSRKLSSHWQRV-YPGKMPPNIEW----GKEKPDLWIE-PESSVIVQVKA-TEIMTSNI 565
Query: 567 FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRS 626
F + +LRFPRI+RVRYDKPWHDCL V+ F ++ + +GK Y D+ +
Sbjct: 566 FKSKITLRFPRIERVRYDKPWHDCLTVEEFESIIKQT-----EGKLYTSHTDET----NT 616
Query: 627 SRKGEKKNVSI-VPSHFLQTDVSDIKGETSIFSDMVFCIL 665
S K +K V++ V FL ++ DI+ ++F D FC+L
Sbjct: 617 SGKIKKTRVTLTVDKKFLGPNIRDIEFINNMFEDKEFCVL 656
>gi|260807401|ref|XP_002598497.1| hypothetical protein BRAFLDRAFT_118305 [Branchiostoma floridae]
gi|229283770|gb|EEN54509.1| hypothetical protein BRAFLDRAFT_118305 [Branchiostoma floridae]
Length = 793
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 221/627 (35%), Positives = 329/627 (52%), Gaps = 68/627 (10%)
Query: 45 YFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPN-AG 103
++ A+RLILP +RER +YG+KE LA I+ LG++KDS+DA++L+ +R A AG
Sbjct: 47 FYPAMRLILPQCERERIAYGIKEFTLAKYYIEILGLAKDSSDALKLLKYRAPSHAKGEAG 106
Query: 104 NFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLAS---SENRAEKISVLSTLIKKTNAQE 160
+F VA VL+ R G LTI+E+NDLLD +A+ ++N+ E + L++ T+A E
Sbjct: 107 DFAAVAYFVLKNRCPE-KGSLTIQEVNDLLDSIATNNAAKNKEEVRRSILKLLRSTSAME 165
Query: 161 MKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEV 220
++LK+G+++ +F FHPDAEDLFNVT L VC L D + R I +
Sbjct: 166 ---------QELKMGMNQAGVFAVFHPDAEDLFNVTNSLAKVCTDLFDPHVRLNEIAISL 216
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-E 279
+P L RI +++H + IE KFDG+R+ +HKNG YFSRS D++ +
Sbjct: 217 FSPFKPMLGQRI-PLDGVEKEMHHEMFYIETKFDGERMLLHKNGDTYKYFSRSGKDYTHQ 275
Query: 280 YG-HAMSKIIEQNV------LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSS 332
+G H + + + V CILDGEM+ ++ G +I A D S
Sbjct: 276 FGAHPLEGSLTPYIHNCFASHVKSCILDGEMVGYNPQTKSIMSKGDKFDIKNMAED---S 332
Query: 333 DRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGE 392
D Q Y FD+L + + L+ER + L K+ P +GRL G R +
Sbjct: 333 DLQTMYCVFDILLLNGQKFANSPLRERVDYLDKLFTPIEGRLFL-----GDRKEARTKA- 386
Query: 393 PCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYIRAGSD 451
EV E I+ R+EG+V+K GSK+ P R G WLK+KPEY+ D
Sbjct: 387 -----------EVIDALNEAIDRREEGLVIKYPGSKYAPDKRKGSGWLKVKPEYVDGLMD 435
Query: 452 -LDVLIIGGYYGSGRRGGEVAQFLVALA-ERPAPDTYPRRFISFCRVGTGLSDEELDAVV 509
+DV+I+GGY+G GRR ++ FL A+A + P P F +FCRVG+G + +EL +
Sbjct: 436 QVDVVIVGGYFGKGRRSHMISHFLCAVAVQSNTPGDKPALFHTFCRVGSGYTLKELYQMG 495
Query: 510 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA 569
+L P++R ++ K+ P + + KE PDVWI+ PE+S+I+ I + I S+ F
Sbjct: 496 QRLHPHWRVFD-KKKPPKTNIMFPSGYKEAPDVWID-PEQSLIVQIKA-AEIIESDKFKT 552
Query: 570 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSS-----------NGTTQKGK------- 611
+LRFPR+++VR DK W DC+ ++ ++ S NG + GK
Sbjct: 553 GCTLRFPRLEKVRDDKEWFDCMTLEELDDMRKVSTIFEDREFCIINGPLEHGKADLERKV 612
Query: 612 -EYGGLQDDKPKQFRSSRKGEKKNVSI 637
YGG P S K NV +
Sbjct: 613 VAYGGTVVQAPGPDTSCVLAHKVNVRV 639
>gi|449548255|gb|EMD39222.1| hypothetical protein CERSUDRAFT_134188 [Ceriporiopsis subvermispora
B]
Length = 1018
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 211/671 (31%), Positives = 351/671 (52%), Gaps = 53/671 (7%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDY--FSALRLILPSLDRERGSYGLKES 68
VL +LF+ +Q + K+R + + + + + Y + LRLILP DRER YGLKE
Sbjct: 47 VLAALFDKLQNERKPEKRRKLLDSWFNHWREQIGYDLYPVLRLILPQKDRERAVYGLKEK 106
Query: 69 VLANCLIDALGMSKDSADAVRLINWRKGGAA-PNAGNFPMVAAEVLQRRQGMISGGLTIK 127
LA I + + DAVR++NW+K ++G+FP V EV+ +R ++ G L+I
Sbjct: 107 NLAKIYIKLIPLGTKDPDAVRMLNWKKPTERDKSSGDFPTVLYEVISKRSSVVEGTLSID 166
Query: 128 ELNDLLDRLASSENRAE-KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFH 186
ELND LD LA + +++ + V+ + +T +E +WI+ IILKD+ + + E ++F FH
Sbjct: 167 ELNDSLDELAKNMGKSDVQARVVQRIYNRTTPEEQRWIVRIILKDMVISVKETTVFSVFH 226
Query: 187 PDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMR-IGDAHAAWRKLH 243
PDA DLFN DLK + +L D +R +D +++ +A P L R + +++
Sbjct: 227 PDAHDLFNTCSDLKKISWELWDPQRRLNDEDKVVQLFRAFTPMLCKRPTRRIEDSVKEMQ 286
Query: 244 GKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKIIEQ--NVLVD 295
G+ ++E K DG+R+Q+HK G+E Y SR D++ YG +++ I + VD
Sbjct: 287 GRTFIMEEKLDGERMQLHKRGNEYFYCSRKGKDYTYLYGKHVGMGSLTPFIHDAFDSRVD 346
Query: 296 RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQS 355
ILDGEMLVWD R FG+ + A R + + C+ FD+LY+ T ++H+S
Sbjct: 347 EIILDGEMLVWDPVSERNLPFGT-LKTAALDRSKKEYNPRPCFKVFDLLYLNGTPLLHRS 405
Query: 356 LKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN 415
LK R ++ GR E G + ++ E + +
Sbjct: 406 LKFRKRNMRSCFTEVSGRFEFAKESEGRTAK-----------------DIRTKMDEIMAS 448
Query: 416 RDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFL 474
R EG+VLK S++ R+ W+K+KPEY+ G +DVL++ G YGSGRR G V+ +
Sbjct: 449 RGEGLVLKHPDSEYVLNGRNRDWIKVKPEYMDNMGETVDVLVVAGGYGSGRRAGGVSTLI 508
Query: 475 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN 534
A+ + + + ++ +F R+GTGLS D + + KP+ E+ + PPSF QV
Sbjct: 509 CAVLDDRSQNEEEIKYSTFVRIGTGLS--FADYIWVRSKPW---KEWDPKNPPSFLQVAR 563
Query: 535 NSKE-RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDV 593
E + D+++E PE S IL + + ++ + +++RFPR +R D DC+
Sbjct: 564 KGNEDKGDLYLE-PEDSFILRVKA-AEITATDGYHLGFTMRFPRALNIRDDLGIEDCMSA 621
Query: 594 QSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGE 653
+ +E + S + ++D PK + RK +K VS++P + ++ +++ +
Sbjct: 622 TAVLETIRSERKRKME-------REDSPK--KKQRKTSQK-VSLMP-EYQAVNMKNVEEK 670
Query: 654 TSIFSDMVFCI 664
+ IFS M F +
Sbjct: 671 SDIFSGMKFMV 681
>gi|50551271|ref|XP_503109.1| YALI0D21384p [Yarrowia lipolytica]
gi|74634313|sp|Q6C8A3.1|DNLI4_YARLI RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|49648977|emb|CAG81303.1| YALI0D21384p [Yarrowia lipolytica CLIB122]
Length = 956
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 216/668 (32%), Positives = 342/668 (51%), Gaps = 48/668 (7%)
Query: 21 KTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDAL 78
+ KP K +F+ + + V D + A RLILP DRER YGLKE L + L
Sbjct: 71 RKKPTEAKAHIASQFIKGWVEEVGKDIYPAFRLILPDKDRERAVYGLKEKALGRLWVKVL 130
Query: 79 GMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
++KDS DA L W++GG +AGNF EVL +R + G +T+ E+N+ LD LA
Sbjct: 131 NLAKDSPDAKALSEWKQGGNE-SAGNFSKRCYEVLSKRTSLTDYGHMTVDEVNERLDLLA 189
Query: 138 SSE-NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVT 196
E ++A++I +L+ K NA E+KW++ IIL+ +K+ +EK F +HPDAE LFNVT
Sbjct: 190 DGETDQAKQIEILTYFYKHMNATELKWLVNIILRQMKMNATEKVFFEPWHPDAESLFNVT 249
Query: 197 CDLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLAM--RIGDAHAAWRKLHGKEVVIECK 252
LK VC +L D +R + +V PQ+A + A + G+ IE K
Sbjct: 250 ASLKRVCWELTDPTKRLTSAEAQVSLFACFMPQIAAFPKYSGQDIAGKHFKGRPFYIEEK 309
Query: 253 FDGDRIQIHKN--GSEIHYFSRSFLDHSE-YGHAMSK-----------IIEQNVLVDRCI 298
DG+R+Q+H + G++ H++SR D +E YG+++ II N V C+
Sbjct: 310 IDGERMQMHMSEYGNKFHWWSRRSKDFTETYGNSLDDASGSLTKRLRGII--NPKVRNCV 367
Query: 299 LDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKE 358
LDGEM+ +D + + FG+ + + ++ L+ + + + FD+L + D ++ +L E
Sbjct: 368 LDGEMVAYDPATKKIIPFGTLRTANRNEQNDLNLTKPM-FMVFDILLLNDKPLVDYTLAE 426
Query: 359 RHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDE 418
R L+ + + ET+ + L V P E A E+E ++ I E
Sbjct: 427 RKRTLRTIFARTDN--ETVGQEGVL--EVLPYTE------ATTAAEIETCMRKIIAESSE 476
Query: 419 GIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVAL 477
G+V+KD S + R WLK+KPEY+ G LDV+IIGGYYGSG+RG ++ +L L
Sbjct: 477 GLVIKDPTSVYRVNTRDDSWLKMKPEYMSEFGEKLDVVIIGGYYGSGKRGSILSSYLCGL 536
Query: 478 AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSK 537
+ +F SF +VG GL+ + A+ TK + +++++ + N
Sbjct: 537 RADGSD-----QFWSFFKVGGGLTAGDYQAIRTKTEGKWKRWDKNDKPKNVLLAGPNGDL 591
Query: 538 ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFV 597
ERPDVWIE P S+++ + + + S+ + LRFPR +R DK W D L + F
Sbjct: 592 ERPDVWIE-PSDSVVVEVKA-ASVVASDQYKVGLCLRFPRFRALRLDKTWEDGLTISQFA 649
Query: 598 ELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIF 657
EL + + KE L+D K + R ++ ++ V S + ++ + TS+F
Sbjct: 650 ELRQTVEMEAE-NKEL-ELEDRKRRNAGPGRGAKRLKLANVSSD--EDELGTDERPTSVF 705
Query: 658 SDMVFCIL 665
F +L
Sbjct: 706 KATSFAVL 713
>gi|189028043|sp|A8N936.2|DNLI4_COPC7 RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
Length = 1025
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 213/615 (34%), Positives = 332/615 (53%), Gaps = 53/615 (8%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYC------DSVDYFSALRLILPSLDRERGSYG 64
VLV LF + +K+ + RK LD + D + LRL+LP DR+R YG
Sbjct: 43 VLVKLFEKLA----TERKQERRRKLLDAWFRHWRREKGFDLYPVLRLLLPQKDRDRAVYG 98
Query: 65 LKESVLANCLIDALGMSKDSADAVRLINWRKGGAA-PNAGNFPMVAAEVLQRRQGMISGG 123
LKE LA I + + DA+RL+NW+K ++G+FP V EV+ +R +I G
Sbjct: 99 LKEKNLAKTYIKLIPLGMRDPDAIRLLNWKKPTERDKSSGDFPQVLCEVVSKRSSVIEGT 158
Query: 124 LTIKELNDLLDRLASSENRAEKIS-VLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
LTI ELN++LD +A + +++ S +L + + A E +WII IILKD+ + + E ++F
Sbjct: 159 LTIDELNEILDDIAKNMGKSDVQSKILRRIYNNSTADEQRWIIRIILKDMNISVKETTVF 218
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQR--HKRQDIEVGKAVRPQLAMR-IGDAHAAW 239
FHPDA+DL+N DLK V +L D ++R K ++I++ A P L R
Sbjct: 219 AVFHPDAQDLYNTCSDLKKVAWELWDPSRRLNAKDKEIQIFHAFAPMLCKRPTRKIEETV 278
Query: 240 RKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKIIEQ--N 291
+ + G + +IE K DG+R+Q+HK G+E Y SR D++ YG +++ I+ +
Sbjct: 279 KAMGGSKFIIEEKLDGERMQLHKRGNEYFYCSRKGKDYTYLYGKHIGAGSLTPFIDSAFD 338
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
+D ILDGEMLVWD R FG+ + A R ++ + C+ FD+LY+ S+
Sbjct: 339 SRIDDIILDGEMLVWDPVSERNLPFGT-LKTAALDRSKKENNPRPCFKVFDLLYLNGMSL 397
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ +++K R L+ +KP GR+E V ++ QGE +++ K ++
Sbjct: 398 LDKTVKFRKNNLRHCIKPIPGRIE-FVEEY--------QGE--------TANDIRKRMEQ 440
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEV 470
+ENR EG+V+K +K+ R+ W+K+KPEY+ G +DVL++ G YGSG+RGG V
Sbjct: 441 VMENRGEGLVIKHPKAKYILNGRNTDWIKVKPEYMDNMGETVDVLVVAGNYGSGKRGGGV 500
Query: 471 AQFLVALAE--RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
+ + A+ + RP D P ++ SF R+GTGLS D V + KP+ K PK PP
Sbjct: 501 STLICAVMDDRRPDSDDEP-KYSSFVRIGTGLS--FADYVWVRSKPW--KVWDPKN-PPE 554
Query: 529 FYQVTNNSKE-RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 587
F Q +E + DV++E PE S IL + + S+ + +++RFPR +R D
Sbjct: 555 FLQTAKKGQEDKGDVYLE-PEDSFILKVKA-AEITPSDQYHMGFTMRFPRALAIRDDLSI 612
Query: 588 HDCLDVQSFVELVHS 602
DC+ E + S
Sbjct: 613 ADCMTATEVFESLKS 627
>gi|74629204|sp|Q7Z7W5.1|DNLI4_COPCI RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|30984133|dbj|BAC76766.1| DNA ligase IV [Coprinopsis cinerea]
gi|62241054|dbj|BAD93669.1| DNA ligase IV [Coprinopsis cinerea]
Length = 1025
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 213/615 (34%), Positives = 332/615 (53%), Gaps = 53/615 (8%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYC------DSVDYFSALRLILPSLDRERGSYG 64
VLV LF + +K+ + RK LD + D + LRL+LP DR+R YG
Sbjct: 43 VLVKLFEKLA----TERKQERRRKLLDAWFRHWRREKGFDLYPVLRLLLPQKDRDRAVYG 98
Query: 65 LKESVLANCLIDALGMSKDSADAVRLINWRKGGAA-PNAGNFPMVAAEVLQRRQGMISGG 123
LKE LA I + + DA+RL+NW+K ++G+FP V EV+ +R +I G
Sbjct: 99 LKEKNLAKTYIKLIPLGMRDPDAIRLLNWKKPTERDKSSGDFPQVLCEVVSKRSSVIEGT 158
Query: 124 LTIKELNDLLDRLASSENRAEKIS-VLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
LTI ELN++LD +A + +++ S +L + + A E +WII IILKD+ + + E ++F
Sbjct: 159 LTIDELNEILDDIAKNMGKSDVQSKILRRIYNNSTADEQRWIIRIILKDMNISVKETTVF 218
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQR--HKRQDIEVGKAVRPQLAMR-IGDAHAAW 239
FHPDA+DL+N DLK V +L D ++R K ++I++ A P L R
Sbjct: 219 AVFHPDAQDLYNTCSDLKKVAWELWDPSRRLNAKDKEIQIFHAFAPMLCKRPTRKIEETV 278
Query: 240 RKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKIIEQ--N 291
+ + G + +IE K DG+R+Q+HK G+E Y SR D++ YG +++ I+ +
Sbjct: 279 KAMGGSKFIIEEKLDGERMQLHKRGNEYFYCSRKGKDYTYLYGKHIGAGSLTPFIDSAFD 338
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
+D ILDGEMLVWD R FG+ + A R ++ + C+ FD+LY+ S+
Sbjct: 339 SRIDDIILDGEMLVWDPVSERNLPFGT-LKTAALDRSKKENNPRPCFKVFDLLYLNGMSL 397
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ +++K R L+ +KP GR+E V ++ QGE +++ K ++
Sbjct: 398 LDKTVKFRKNNLRHCIKPIPGRIE-FVEEY--------QGE--------TANDIRKRMEQ 440
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEV 470
+ENR EG+V+K +K+ R+ W+K+KPEY+ G +DVL++ G YGSG+RGG V
Sbjct: 441 VMENRGEGLVIKHPKAKYILNGRNTDWIKVKPEYMDNMGETVDVLVVAGNYGSGKRGGGV 500
Query: 471 AQFLVALAE--RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
+ + A+ + RP D P ++ SF R+GTGLS D V + KP+ K PK PP
Sbjct: 501 STLICAVMDDRRPDSDDEP-KYSSFVRIGTGLS--FADYVWVRSKPW--KVWDPKN-PPE 554
Query: 529 FYQVTNNSKE-RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 587
F Q +E + DV++E PE S IL + + S+ + +++RFPR +R D
Sbjct: 555 FLQTAKKGQEDKGDVYLE-PEDSFILKVKA-AEITPSDQYHMGFTMRFPRALAIRDDLSI 612
Query: 588 HDCLDVQSFVELVHS 602
DC+ E + S
Sbjct: 613 ADCMTATEVFESLKS 627
>gi|170086844|ref|XP_001874645.1| DNA ligase IV [Laccaria bicolor S238N-H82]
gi|164649845|gb|EDR14086.1| DNA ligase IV [Laccaria bicolor S238N-H82]
Length = 1059
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 211/617 (34%), Positives = 328/617 (53%), Gaps = 56/617 (9%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCD------SVDYFSALRLILPSLDRERGSYG 64
VLV LF+ +Q +K+ + RK ++T+ + D + LRLILP DRER YG
Sbjct: 42 VLVGLFDKLQ----VERKQDRRRKLIETWFNHWREEKGYDLYPVLRLILPQKDRERAVYG 97
Query: 65 LKESVLANCLIDALGMSKDSADAVRLINWRKGGA-APNAGNFPMVAAEVLQRRQGMISGG 123
LKE LA I + + DA+RL+NW+K +G+FP V EV+ +R +I G
Sbjct: 98 LKEKNLAKTYIKLIPLGMRDPDAIRLLNWKKPTEREKTSGDFPTVLYEVVSKRSSVIEGS 157
Query: 124 LTIKELNDLLDRLASSENRAE-KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
L+I ELND+LD LA + + + + +L + ++ AQE +WI+ IILKD+ + + E +IF
Sbjct: 158 LSIDELNDILDELAKNMGKQDIQSGILRRIYNRSTAQEQRWIVRIILKDMIISVKETTIF 217
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMR-IGDAHAAW 239
FHPDA+DL+N DLK + +L D + R +D +++ A P L R
Sbjct: 218 SVFHPDAQDLYNTCSDLKKIAWELWDPSFRLNAEDKAVQLFHAFAPMLCKRPTKKIEETV 277
Query: 240 RKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKIIEQ--N 291
R++ G E IE K DG+R+Q+HK G+E YFSR D++ YG +++ I++ +
Sbjct: 278 REMSGSEFFIEEKLDGERMQLHKRGNEYLYFSRKGKDYTYLYGKHVGTGSLTPFIDKAFD 337
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR--QLCYFAFDVLYVGDT 349
VD ILDGEMLVWD R FG+ + AA D + + C+ FD+LY+
Sbjct: 338 PRVDDIILDGEMLVWDPVSERNLPFGT---LKTAALDKSKKEHNPRPCFKVFDLLYLNGQ 394
Query: 350 SVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFF 409
S++H+S R + ++ +K GR+E V G + ++ K
Sbjct: 395 SLLHKSTAFRKKNMRNCLKEITGRIEYAVDYKGTTAK-----------------DIRKRM 437
Query: 410 KETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGG 468
E + NR EG+V+K SK+ R+ W+K+KPEY+ G +DVL++ G YG+G+RGG
Sbjct: 438 DEVMGNRGEGLVIKHPLSKYVLNGRNMDWIKVKPEYMDNMGETVDVLVVAGNYGTGKRGG 497
Query: 469 EVAQFLVALAE--RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
V+ + A+ + R D ++ +F R+G+GLS D V + KP+ K PK P
Sbjct: 498 GVSTLICAVLDDRRANEDDEEPKYSTFVRIGSGLS--FADYVWVRDKPW--KVWDPKH-P 552
Query: 527 PSFYQVTNNSKE-RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
P F Q + E + D+++E PE S IL + + S+ + +++RFPR +R D
Sbjct: 553 PEFLQTAKRTHEDKGDLYLE-PEDSFILKVKA-AEITPSDQYHMGFTMRFPRALSIRDDL 610
Query: 586 PWHDCLDVQSFVELVHS 602
DC+ + E + S
Sbjct: 611 SIADCMTATAVFESLRS 627
>gi|409040486|gb|EKM49973.1| hypothetical protein PHACADRAFT_178599 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1036
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 198/614 (32%), Positives = 329/614 (53%), Gaps = 50/614 (8%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCD--SVDYFSALRLILPSLDRERGSYGLKES 68
VL +LF+ +Q + K+R + + + + D + LRLILP DRER YGLKE
Sbjct: 49 VLSALFDRLQNERKPDKRRRLLATWFNHWREDKGYDLYPILRLILPQKDRERAVYGLKEK 108
Query: 69 VLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQGMISGGLTIK 127
LA I + + K DA+RL+NW+K +AG+FP V EV+ +R +I G L+++
Sbjct: 109 ALAKIYIRMIPLQKQDRDAIRLLNWKKPADKEASAGDFPTVLYEVISKRSSVIQGSLSVE 168
Query: 128 ELNDLLDRLASSENRAE-KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFH 186
++ND+LD LA + ++E ++ +++ + A+E +W++ IILKD+ + + E ++F FH
Sbjct: 169 DVNDVLDELAKNGGKSEPQVKIMTRVYNSMTAEEQRWLVRIILKDMVISVKETTVFSVFH 228
Query: 187 PDAEDLFNVTCDLKLVCEKLKDRNQR--HKRQDIEVGKAVRPQLAMR-IGDAHAAWRKLH 243
PDA DLFN DLK V +L D +R + + + + +A P L R + + +
Sbjct: 229 PDAHDLFNTCSDLKKVAWELWDPQRRLNEEEKTVHLFRAFAPMLCKRPTRRIEESVKDMG 288
Query: 244 GKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKIIEQ--NVLVD 295
G + VIE K DG+R+Q+HK G+E Y SR D++ YG +++ IE + V+
Sbjct: 289 GSKFVIEEKLDGERLQLHKRGNEYFYCSRKGKDYTYLYGKHVGSGSLTPFIEDAFDPRVE 348
Query: 296 RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL----CYFAFDVLYVGDTSV 351
ILDGEMLVWD R FG+ + A G ++++L C+ FD+L++ S+
Sbjct: 349 EIILDGEMLVWDPVSERNLPFGTLKTAA-----GDKTNKELRPRPCFKVFDLLHLNGQSL 403
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ +SLK R L+ + KGRLE + G + +V ++ +
Sbjct: 404 LQKSLKFRKNNLRACLSEVKGRLEFVTEFEGKTAQ-----------------DVRQYMEI 446
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEV 470
+ NR EG+++K GS++ R+ W+K+KPEY+ G +DVL++ G YG+GRR G V
Sbjct: 447 IMNNRGEGLIMKHPGSEYVLNGRNKDWIKVKPEYMDNMGETVDVLVVAGCYGTGRRSGGV 506
Query: 471 AQFLVALA--ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
+ + A+ +R A D ++ +F R+G+GL+ D V + KP+ K PK+ PP
Sbjct: 507 STLVCAVLDDQRAAGDDDGMKYRTFVRIGSGLT--FADYVWIRQKPW--KEWNPKQPPPW 562
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWH 588
+++ D +++ PE S I+ + + ++ + Y++RFPR +R D
Sbjct: 563 LLTAKRGQEDKGDAYLK-PEDSFIIKVKA-AEITPTDQYHIGYTMRFPRAMMIREDLGIE 620
Query: 589 DCLDVQSFVELVHS 602
DC+ + E V S
Sbjct: 621 DCMTASAVFESVRS 634
>gi|389745521|gb|EIM86702.1| ATP-dependent DNA ligase [Stereum hirsutum FP-91666 SS1]
Length = 1077
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 207/674 (30%), Positives = 355/674 (52%), Gaps = 54/674 (8%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKES 68
LV LF +Q + ++R + D + + V D + LRLILP DRER YGLKE
Sbjct: 57 ALVGLFEKLQNERKHERRRRLLNAWFDHWREKVGPDLYPVLRLILPQKDRERALYGLKEK 116
Query: 69 VLANCLIDALGMSKDSADAVRLINWRKGGAA-PNAGNFPMVAAEVLQRRQGMISGGLTIK 127
LA I A+ + +A+RL+NW++ A +G+FP+V +V+ +R +I G LTI+
Sbjct: 117 NLARLYIKAIPLEPKHPEAIRLLNWKRPSEADKTSGDFPLVLYDVVSKRSSVIEGSLTIE 176
Query: 128 ELNDLLDRLASSENRAEKIS-VLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFH 186
++N++LD L+++ +++ S ++ + ++ +E +W++ IILKDL + + E ++F FH
Sbjct: 177 DINNILDELSTNIGKSDIQSRIIQRVYNRSTPEEQRWLVRIILKDLHVAVKETTVFSIFH 236
Query: 187 PDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMR-IGDAHAAWRKLH 243
PDA DL+N DLK V +L D +R +D I++ + P L R G + +++
Sbjct: 237 PDAHDLYNTCSDLKKVAWELWDTKKRLNAEDKEIQLFRPFTPMLCKRPTGKIEESVKEMG 296
Query: 244 GKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YG-HAMSKIIEQNVL------VD 295
G+ ++E K DG+R+Q+HK G+E Y SR D++ YG H + + ++ V+
Sbjct: 297 GRAFILEEKLDGERMQLHKRGNEFFYCSRKGKDYTYLYGKHVAAGSLTPHIAGAFDPRVE 356
Query: 296 RCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYFAFDVLYVGDTSVIHQ 354
ILDGEMLVWD R FG+ + A +++ L+ + C+ FD+LY+ S+I +
Sbjct: 357 DIILDGEMLVWDPVSERNLPFGTLKTAALNKSKERLNP--RPCFKVFDLLYLNGQSLITK 414
Query: 355 SLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIE 414
S + R + L+ V P KG +E + + EV + +E +
Sbjct: 415 STRFRKKNLRACVTPIKGHIEFVD-----------------EFIIKTAKEVREKMEEVMN 457
Query: 415 NRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQF 473
+R EG+V+K S++ R+ W+K+KPEY+ G +DVL+IGG YGSGRR G V+
Sbjct: 458 DRGEGLVMKHPDSEYVLNGRNKDWIKVKPEYMDNMGETVDVLVIGGKYGSGRRAGGVSSI 517
Query: 474 LVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVT 533
L + + + P ++ +F RVG G S D + + KP+ EY PP+F QV
Sbjct: 518 LCGVLDDRYKEGEP-KYSTFVRVGAGFS--YTDYLWIRDKPW---KEYDPNNPPAFLQVA 571
Query: 534 NNS--KERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCL 591
+ +++P++++E PE S I+ + + ++ + Y++RFPR +R D DC+
Sbjct: 572 KSKTLEDKPELYLE-PEHSFIIKVKA-AEITPTDAYHIGYTMRFPRALGIRDDLTVADCV 629
Query: 592 DVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIK 651
+ + V S ++ + G + + R K I+ + TD+ D++
Sbjct: 630 TATALFDSVRSERKRKREEEMLG--------KPKKKRVKVAKKPLILQEYKGSTDLKDVQ 681
Query: 652 GETSIFSDMVFCIL 665
E+ +F M F ++
Sbjct: 682 VESDLFEGMAFAVV 695
>gi|156615336|ref|XP_001647535.1| predicted protein [Nematostella vectensis]
gi|156214768|gb|EDO35746.1| predicted protein [Nematostella vectensis]
Length = 907
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 212/629 (33%), Positives = 333/629 (52%), Gaps = 57/629 (9%)
Query: 57 DRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAP--NAGNFPMVAAEVLQ 114
D++R +YG+KE++ A +ID + + KDS+ +L+N+R ++ + G+F VA VL+
Sbjct: 75 DKDRPAYGMKENIFARYIIDVMSLGKDSSSGRKLLNYRHPSSSKQDSQGDFASVAYFVLK 134
Query: 115 RRQGMISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKD 171
R G L I+E+N LLD +A++ ++ +V + L+++++A+E+KW+I IILK+
Sbjct: 135 DRCPE-KGSLNIEEVNKLLDDMANANLEKKRDNVKMSIQMLLRESSAKEVKWLIRIILKE 193
Query: 172 LKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMR 231
LK+G+ E S+F FHPDA D +N +L VC L D + R +I + A RP LA
Sbjct: 194 LKMGLGENSVFAVFHPDALDHYNTCNNLSKVCMDLHDPSVRMNEAEITIFSAFRPMLAQ- 252
Query: 232 IGDAHAAWRKLHGKE-------VVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAM 284
W L+ E IE K DG+R +HK+G + YFSR +++ H
Sbjct: 253 -------WSPLNQVEDLMKNQPFYIETKMDGERFILHKDGDKYRYFSRG---GNDFTHTF 302
Query: 285 SKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVL 344
+ + L + E L+ +S + + RQ C+ FDVL
Sbjct: 303 GENSREGCLTPKINDCFERLISISSPGQSIHAFWMERCWFMTHPMKFLFRQPCFVVFDVL 362
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
+ + L ER +LL+ V KP G L+ V Q A + +E
Sbjct: 363 LYNGKKLANTPLHERLKLLETVFKPCLGFLQ----------FVERQN-------ASSNEE 405
Query: 405 VEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYIRAGSD-LDVLIIGGYYG 462
V K E I+ R+EG+V+K S ++P R+G WLK+KPEY+ + SD LDV+I+GGY+G
Sbjct: 406 VIKSLNEAIDRREEGLVVKSRDSVYKPNVRNGGGWLKIKPEYVASLSDDLDVVIVGGYFG 465
Query: 463 SGRRGGEVAQFLVALAERPAPD----TYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 518
GRR G V+ FL A+A P P +F S C+VG+G + ELD + +LKP+++
Sbjct: 466 VGRRQGMVSHFLCAVA---VPSDRRGEKPSQFYSLCKVGSGYTMNELDELGQQLKPHWQP 522
Query: 519 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRI 578
+ K PP T KE+PDVWIE P KS ++ I + SE + A ++LRFPR+
Sbjct: 523 FNQAK--PPKSVCFTPGFKEKPDVWIE-PSKSKVVQIKA-AEITPSEKYRAGFTLRFPRL 578
Query: 579 DRVRYDKPWHDCLDVQSFVELVHSSNGT-TQKGKEYGGLQDDKPKQFRSSRK-GEKKNVS 636
+ VR+DK W+DCLD+ +L+ + G T + G K+ R+++K E+ +S
Sbjct: 579 ECVRHDKSWYDCLDLSGLEQLLKKAEGKLTSRHTSLGEESAPAKKRSRTTQKRAEQMRMS 638
Query: 637 IVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ P F ++VS + + +F FCI+
Sbjct: 639 VAP-QFKPSEVSTVAKVSKLFEGKEFCIV 666
>gi|395331891|gb|EJF64271.1| DNA ligase 4 [Dichomitus squalens LYAD-421 SS1]
Length = 1025
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 202/610 (33%), Positives = 326/610 (53%), Gaps = 44/610 (7%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKES 68
VL +LF+ +Q + K+R + + + + D + LRLILP DRER YGLKE
Sbjct: 47 VLAALFDRLQNERKPDKRRKLLSSWFNHWRKEIGPDLYPVLRLILPQKDRERAVYGLKEK 106
Query: 69 VLANCLIDALGMSKDSADAVRLINWRKGGA-APNAGNFPMVAAEVLQRRQGMISGGLTIK 127
LA I + + K DAVRL+NW+K ++G+FP V EV+ +R ++ G LT+
Sbjct: 107 NLARAYIKLIPLGKRDPDAVRLLNWKKPTERGKSSGDFPTVLYEVVNKRSSVVEGSLTVD 166
Query: 128 ELNDLLDRLASSENRAE-KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFH 186
++N+ LD++A + +++ + +L + ++ +E +WI+ IILKD+ + + E ++F FH
Sbjct: 167 DVNEYLDQIAQNMGKSDIQSKILQRIYNRSTPEEQRWIVRIILKDMIISVKENTVFGVFH 226
Query: 187 PDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDA-HAAWRKLH 243
PDA DLFN DLK V +L D +R K +D +++ +A P L R + + +
Sbjct: 227 PDAHDLFNTCSDLKKVAWELSDPFRRLKDEDKTVQLFRAFAPMLCKRPNKKIEESVKGMQ 286
Query: 244 GKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKIIEQ--NVLVD 295
G+ +IE K DG+RIQ+HK G+E Y SR D++ YG +++ I+ + VD
Sbjct: 287 GRTFIIEEKLDGERIQLHKRGNEYFYCSRKGKDYTYLYGKHVGTGSLTPYIDAAFDERVD 346
Query: 296 RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQS 355
ILDGEMLVWD R FGS + A R + + C+ FD+LY+ S++H+S
Sbjct: 347 EIILDGEMLVWDPVSGRNLPFGS-LKTAALDRSKKEHNPRPCFKVFDLLYLNGMSLLHRS 405
Query: 356 LKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN 415
K R L+ +K GR+E + G + ++ + + N
Sbjct: 406 TKFRKRNLRSCLKEVPGRIEFITEYEGKTAK-----------------DIRIRMDDIVAN 448
Query: 416 RDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFL 474
R EG+VLK +++ R+ W+K+KPEY+ G +D+L++ G YG+GRR G V+ +
Sbjct: 449 RGEGLVLKHPDAEYVLNGRNKDWIKVKPEYMDNMGETVDLLVVAGNYGTGRRSGGVSTLI 508
Query: 475 VA-LAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVT 533
A L +R + D ++ SF R+GTGLS D + + KP ++ PS+ V+
Sbjct: 509 CAVLDDRRSNDDDEPKYCSFVRIGTGLS--YADYIWIRQKP----WKVWGVNGPSWLHVS 562
Query: 534 NNSKE-RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLD 592
E + D ++E PE S IL I I S+++S +++RFPR R+R D DC+
Sbjct: 563 RKGHEDKGDCYLE-PEDSFILKIKG-AEIISSDLYSLGFTMRFPRALRIRDDLSIADCMT 620
Query: 593 VQSFVELVHS 602
+ +E + S
Sbjct: 621 ATAVLENIRS 630
>gi|242024302|ref|XP_002432567.1| DNA ligase, putative [Pediculus humanus corporis]
gi|212518027|gb|EEB19829.1| DNA ligase, putative [Pediculus humanus corporis]
Length = 891
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 201/575 (34%), Positives = 316/575 (54%), Gaps = 44/575 (7%)
Query: 45 YFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAP-NAG 103
+F RL++P LDRERG+YG+KE LA I L + KD DA++L+N + + N
Sbjct: 56 FFPIFRLLIPHLDRERGAYGIKERTLAKIYISILSLPKDGEDALKLLNCKNPKTSYFNNC 115
Query: 104 NFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQE 160
+F +A +L+ R G L+++E+N LD++++S E +V L +L+K TNA+E
Sbjct: 116 DFASIAFCILRNRCAE-GGQLSVEEVNKHLDKISTSHAANEPRNVDAELISLLKSTNAEE 174
Query: 161 MKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEV 220
KW+I I+LKD+KLG+SE IF +HPDA +L++ + L+ +C+ L D R I++
Sbjct: 175 QKWLIRILLKDVKLGLSENVIFKCYHPDARELYDSSNSLRKICDLLNDPEIRLNEIQIQL 234
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDH-SE 279
+P L+ + IE K DG+R Q+H YFSR+ D +
Sbjct: 235 FTPFKPMLSEECDIQKIDYYLKRSCHFFIETKLDGERFQLHFEEGNFKYFSRNGYDFTTN 294
Query: 280 YGHA-----MSKIIEQNV--LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSS 332
+G + +S I + + V +LDGEM+ WD F+ G N ++ K ++G +
Sbjct: 295 FGSSKREGNLSPRIFKRIPPHVKSFVLDGEMMSWDRITRSFSSKGKNLDV-KNLKEG--N 351
Query: 333 DRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGE 392
Q C+ FD+L + ++ L R E+L+K+++P +G + L R Q
Sbjct: 352 HYQSCFCVFDILLYNGEVLTNKPLIARLEILEKIIEPEEGTIIIL---------NRKQ-- 400
Query: 393 PCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDR-SGKWLKLKPEYIRAGSD 451
++ N EV E I+NR+EGIV+K+ S ++P R +G W K+KPEY ++
Sbjct: 401 -----ISSN-SEVIDSLNEAIDNREEGIVMKESMSVYKPNVRKNGGWYKIKPEYTDGLAE 454
Query: 452 -LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVT 510
LD+LIIGGYYG G G V FL+ A + D F S RVG+G S ++L+ +
Sbjct: 455 TLDLLIIGGYYGRGHLKGSVNHFLLGAAVNVSDDNI--LFYSTGRVGSGYSIKDLEDLSL 512
Query: 511 KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 570
KLKPY+++ + R P S KE+PDVWI+ P+KS IL I + + S +F +
Sbjct: 513 KLKPYWKEAK-NDRMPLS----VKWGKEKPDVWIK-PDKSYILEIKAS-EIVSSAIFKSG 565
Query: 571 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNG 605
Y+LRFPR++++RYDK W +CL + + E+ ++G
Sbjct: 566 YALRFPRVEKIRYDKTWKECLTLHNLEEIAKIASG 600
>gi|340504113|gb|EGR30594.1| hypothetical protein IMG5_128250 [Ichthyophthirius multifiliis]
Length = 813
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 209/696 (30%), Positives = 369/696 (53%), Gaps = 77/696 (11%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY----CDSVDY-FSALRLILPSLDRERGSYGLK 66
++ +N QK K + K + + D + C +Y ++ LRL+LP D+ERG++GLK
Sbjct: 29 MILFYNNQQKPKQSYSKIQTTKDWFDNFFFKDCRDPNYSYTILRLLLPVYDKERGAFGLK 88
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNA---GNFPMVAAEVLQRRQGMISGG 123
E VLA+ AL SKD + +R ++ P+ G+F V VL +
Sbjct: 89 EKVLADIFSKALPPSKDILNRLRF--YKNATYQPHQAPIGDFGDVLKHVLDDFCPTMHV- 145
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
+TI ++++ L++LA ++ + E+I ++ LIK+ ++EMKWI +ILKDLK+GI+
Sbjct: 146 ITINQVDENLNKLAQAQTKEEQIEIIRFLIKQCTSEEMKWIARLILKDLKIGINHDKTLT 205
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDI-EVGKAVRPQLAMRIGDAHAAWRKL 242
FH DA LFN T L+ VC + +D+N H+ Q++ + +RP LA + + L
Sbjct: 206 LFHQDALALFNTTSSLREVCNEFQDKN--HRLQEVMRIFYPIRPMLAQKKSLKDIQYI-L 262
Query: 243 HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVL--VDRCILD 300
GK+ +IE K+DG+RIQ H +EI +F+R+ +++ H M I+ + ++ CILD
Sbjct: 263 EGKDFLIETKYDGERIQCHVTENEIRFFTRNSHNYTNIYHKMCVIVRHGISQEINECILD 322
Query: 301 GEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYV-----GDTSVIHQS 355
GEM+V + + +FG N+ +A + D +D +CY FD+LY+ D +++ +
Sbjct: 323 GEMVVLEKESGQSVQFGMNKVVALSNED---TDFCICYKVFDILYIKTKNGNDVNLLSST 379
Query: 356 LKERHELLQK-VVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIE 414
LKER E+L+ +V K +LE + G N + R + ++ F E +
Sbjct: 380 LKERKEVLKSAIVNEIKYQLEII---QG-NEYSRQE-------------DILNEFNEAMN 422
Query: 415 NRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGS--------GR 465
N +EGI++K L S++ P +RS KW+K+K +Y +D LD++++G + G+ G
Sbjct: 423 NNEEGIIIKQLDSQYVPDERSNKWIKMKGDYYEGITDTLDLIVLGAFLGNKSYKTSGIGD 482
Query: 466 RGGEVAQFLVALA---ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
+ FL+ ++ ++ P F+ FC+VGTG +DE L + KL+ + +
Sbjct: 483 WTDCLTHFLLGISSYIDKNVPTN--SVFLPFCKVGTGYTDEILRTIKIKLRDQWVR---- 536
Query: 523 KRAPPSFYQVTNNSK-ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 581
PSF Q K ++P+ +I SP+ S+I + + I S F Y+LRFPR +++
Sbjct: 537 TSNLPSFVQNCKLQKSDKPEAFINSPDNSLIFEVRAS-EIINSHNFPTHYTLRFPRFEKL 595
Query: 582 RYDKPWHDCLDVQSFVELVHSSNGTTQKG--------KEYGGLQDDK----PKQFRSSRK 629
R DK W++C+ ++ ++ +N + ++G KE G +++ PK+ + ++
Sbjct: 596 RTDKDWYECMTLEDLQQM--KNNLSKKQGESDAEKSQKEDGEDNNEQGTRSPKKRKQIKR 653
Query: 630 GEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
++ + + + Q DVS + + +F VF I+
Sbjct: 654 NHQEYANQIMQQYQQIDVSQVNLVSQLFIGFVFNII 689
>gi|378726686|gb|EHY53145.1| DNA ligase 4 [Exophiala dermatitidis NIH/UT8656]
Length = 1044
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 201/673 (29%), Positives = 352/673 (52%), Gaps = 81/673 (12%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P+ ++R+ +++ + V D++ A+RLI+P DRERG YGLKE +L L+ + +
Sbjct: 83 PSERRRAIIERYIARWRRDVGNDFYPAMRLIIPDKDRERGVYGLKEKILGKLLVKIMKID 142
Query: 82 KDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLASSE 140
K+S D L++W+ + +AG+F + EV+ +R I G +TI+E+N+LLD+L+++
Sbjct: 143 KNSEDGFNLLHWKIPSQSKSAGDFAVRCYEVISKRPMRIEVGDMTIEEVNELLDKLSAAP 202
Query: 141 NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLK 200
++ +L+ K+ NA+E+ W+I IIL+ +K+G +EK+ FH FHPDAE LFNV+ +L+
Sbjct: 203 REEHQLPILTEFYKRMNAEELMWLIRIILRQMKVGATEKTFFHIFHPDAETLFNVSSNLR 262
Query: 201 LVCEKLKDRNQRHKRQD--IEVGKAVRPQLAM-RIGDAHAAWRKL----HGKEVVIECKF 253
VC +L D + R + + + + + +PQLA + +++ E IE K
Sbjct: 263 RVCWELYDPSIRLEGDEAGVMLMECFQPQLAQYNMESLQKIVQRMRPTEEDDEFWIEEKL 322
Query: 254 DGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNVL--VDR 296
DG+R+Q+H + G ++SR D++ YG A+++ I+ V+
Sbjct: 323 DGERMQLHMITDDSIEGGRRFQFWSRKAKDYTYLYGKGFYDREGALTQFIKDAFRPDVEN 382
Query: 297 CILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYFAFDVLYVGDTSVIHQS 355
ILDGEM+ WD + FG+ + A A R+ + ++ + FD+L + ++ +
Sbjct: 383 IILDGEMITWDPEQDAPVPFGTLKTAALAEQRNPFAGGQRPLFRVFDILLLNGQNLTRYT 442
Query: 356 LKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN 415
L++R + L+ VK R+E L+ + V V++VE +E +
Sbjct: 443 LRDRRKALEASVKSVPRRIE-------LHEYK----------VGRTVEDVENCLREVVAQ 485
Query: 416 RDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFL 474
EG++LK+ S + DR+G W K+KPEY+ G D LIIG +YGSGRRGG+++ FL
Sbjct: 486 ASEGLMLKNPRSAYRLDDRNGDWQKVKPEYMTGLGESFDCLIIGAFYGSGRRGGKLSSFL 545
Query: 475 VAL--------------------------AERPAPDTYPRRFISFCRVGTGLSDEELDAV 508
L +P D ++F+SF +VG G++ + +
Sbjct: 546 CGLRAPANYKSPFQSQNRRQSQVQSQSQSQAQPEGDEPSQKFVSFFKVGGGMTANDYATI 605
Query: 509 VTKLKPYFRKYEYPKRAPPSFYQVTNNS---KERPDVWIESPEKSIILSITSDIRTIRSE 565
+ + ++ PKR P + ++ S KERPDVWI+ PE S+++ + + + SE
Sbjct: 606 QHETDGKWLDWD-PKRPPTQYIELGGGSSVQKERPDVWIK-PEDSLVIEVKA-AQVTASE 662
Query: 566 VFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFR 625
++ +LRFPR ++R DK W L ++ F +L + ++ E + D K KQ +
Sbjct: 663 DYACGMTLRFPRFKKLRRDKDWRTALSLEEFKDLRDNIEKEQEQKME---VDDAKKKQRK 719
Query: 626 SSRKGEKKNVSIV 638
+ KK +++
Sbjct: 720 GNAPARKKMITVA 732
>gi|390600153|gb|EIN09548.1| ATP-dependent DNA ligase [Punctularia strigosozonata HHB-11173 SS5]
Length = 985
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 213/681 (31%), Positives = 349/681 (51%), Gaps = 67/681 (9%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDY--FSALRLILPSLDRERGSYGLKES 68
VL+ LF +Q + +++ + + + + Y + LRLILP DRER YGLKE
Sbjct: 42 VLIQLFEKLQNERKPERRKRLLDGWFNHWRQEIGYDLYPVLRLILPQKDRERAVYGLKEK 101
Query: 69 VLANCLIDALGMSKDSADAVRLINWRKGGAAP-NAGNFPMVAAEVLQRRQGMISGGLTIK 127
LA I + + ADA+RL+NW+K ++G+FP V EV+ +R +I G LT+
Sbjct: 102 NLAKAYIKLIPLGMKDADAIRLLNWKKPADKDRSSGDFPTVLYEVVNKRSSVIKGLLTVH 161
Query: 128 ELNDLLDRLASSENRAEKIS-VLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFH 186
ELND+LD L+ + + + S +L + ++ +E +WI+ IILKD+ + + E ++F FH
Sbjct: 162 ELNDVLDELSQNIGKQDVQSRILQRVYNRSTPEEQRWIVRIILKDMTISVKETTVFSVFH 221
Query: 187 PDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMR-IGDAHAAWRKLH 243
PDA DLFN DLK V +L D +R D I++ ++ P L R + +++
Sbjct: 222 PDAHDLFNTCSDLKKVVWELWDPKRRLNAADKTIQLFRSFAPMLCKRPTRRLEDSVKEMG 281
Query: 244 GKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKIIEQ--NVLVD 295
G+ IE K DG+R+Q+HK G+E Y SR D++ YG +++ I++ + V+
Sbjct: 282 GRTFFIEEKLDGERMQLHKRGNEYFYCSRKGKDYTYLYGKHVGMGSLTPFIDKAFDSRVE 341
Query: 296 RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQS 355
ILDGEMLVWD R FG+ + A R + + C+ FD+LY+ ++ +S
Sbjct: 342 DIILDGEMLVWDPVSGRNLPFGT-LKTAALDRTRKEQNPRPCFKVFDLLYLNGMPLLQKS 400
Query: 356 LKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN 415
K R L+ + P GR+E + G + +V +E +EN
Sbjct: 401 TKFRRRNLRACLTPIPGRIELVSEFEGKTAK-----------------DVRTRMEEVMEN 443
Query: 416 RDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFL 474
R EG+++K S++ R+ W+K+KPEY+ G +DVL++ G YG+G RGG V+ +
Sbjct: 444 RGEGLIIKHPDSEYVLNGRNKDWIKVKPEYMDNMGETVDVLVVAGNYGTGHRGGGVSTLV 503
Query: 475 VALAE---RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFY- 530
A+ + RP D P ++ S R+G+GLS D V + KP+ + +R PPSFY
Sbjct: 504 CAVLDDRRRPEEDDEP-KYASVVRIGSGLS--FADYVWIRSKPW---KIWAERNPPSFYL 557
Query: 531 QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDC 590
++++ DV++E PE S I+ + + + S+++ +++RFPR +R D DC
Sbjct: 558 TAPKGTEDKGDVYLE-PEDSFIIKVKA-AEIVTSDLYYLGFTMRFPRAVNIRDDLSVADC 615
Query: 591 LDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQ------ 644
+ F L S +K +E + K EKK + H L
Sbjct: 616 MTATEF--LAEMSESKKRKVEE-------------ETVKPEKKRKTASKVHVLSEYGMGG 660
Query: 645 TDVSDIKGETSIFSDMVFCIL 665
+ + D+ E+ +F M F ++
Sbjct: 661 SRLKDVAVESVLFRGMRFMVV 681
>gi|392589951|gb|EIW79281.1| DNA ligase 4 [Coniophora puteana RWD-64-598 SS2]
Length = 992
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 217/679 (31%), Positives = 349/679 (51%), Gaps = 66/679 (9%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCD------SVDYFSALRLILPSLDRERGSYG 64
+L LF+ + A ++ + RKFLD + + D + LRLILP DRER YG
Sbjct: 35 ILSRLFDKLS----AERRPERRRKFLDVWFNHWKEDIGYDLYPVLRLILPQRDRERAVYG 90
Query: 65 LKESVLANCLIDALGMSKDSADAVRLINWRKGGAAP-NAGNFPMVAAEVLQRRQGMISGG 123
LKE LA I + ++ DA+RL+NW+K ++G+FP V EV+ +R + G
Sbjct: 91 LKEKNLAKTYIKLIPLNMKDPDAIRLLNWKKPTDRDRSSGDFPTVLYEVVNKRSSVTEGS 150
Query: 124 LTIKELNDLLDRLASSENRAEKIS-VLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
LT+++LN++LD L+ + + E S +L + + +E +WI+ IILKD+ + + E ++F
Sbjct: 151 LTVEDLNNILDELSKNMGKQEVQSKILQRIYNRATPEEQRWIVRIILKDMVISVKETTVF 210
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGD-AHAAW 239
FH DA+DLFN DLK V +L D ++R +D +++ +A P L R D
Sbjct: 211 SVFHSDAQDLFNTCSDLKKVAWELWDSSRRLNPEDKSVQLFRAFAPMLCKRPTDRIDETV 270
Query: 240 RKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKIIEQ--N 291
+++ G++ +IE K DG+R+Q+HK G+E Y SR D++ YG +++ I +
Sbjct: 271 KEMQGRKFIIEEKLDGERMQLHKRGNEYFYCSRKGKDYTYLYGQHVGNGSLTPYIHSAFD 330
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR--QLCYFAFDVLYVGDT 349
VD ILDGEMLVWD R FG+ + AA D + + + C+ FD+LY+
Sbjct: 331 ERVDDIILDGEMLVWDPVSERNLPFGT---LKTAALDKTNKEHNPRPCFKIFDLLYLNGM 387
Query: 350 SVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFF 409
S+ +SLK R L+ + GRLE V G + ++ +
Sbjct: 388 SLHKKSLKFRKRNLRACLTEVPGRLEFTVEYEGKTAK-----------------DIRQKM 430
Query: 410 KETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGG 468
+E + R EG+V+K S++ R+ W+K+KPEY+ G +DVL++ YG+G+R G
Sbjct: 431 EEVMSARGEGLVIKHPDSEYTLNGRNRDWIKVKPEYMDNLGETVDVLVVAANYGTGKRSG 490
Query: 469 EVAQFLVA-LAERPAPDTYPRRFISFCRVGTGLSDEELDAV-VTKLKPYFRKYEYPKRAP 526
V+ + A L +R D ++ SF RVGTGLS + V K KP+ + P
Sbjct: 491 GVSTLICAVLNDRQPDDDDEPKYSSFVRVGTGLSFTDYIWVRQKKWKPWTAE------DP 544
Query: 527 PSFYQVTNNSKE-RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
P+FYQ + +E + D++IE P S I+ I + S+ + ++RFPRI +R D
Sbjct: 545 PTFYQTSKRGQEDKGDMYIE-PHDSFIVKIKA-AEITASDQYHMGMTMRFPRILSIRDDL 602
Query: 586 PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQT 645
DC+ +E + +G G+ + K K + K SI+P +
Sbjct: 603 GIEDCMTASEVLESMQVERKRKMEGN--TGVSNKKRKTMTA------KKASILP-EYHGP 653
Query: 646 DVSDIKGETSIFSDMVFCI 664
D+ ++ E+ +F DM F +
Sbjct: 654 DLKSVELESDVFEDMRFMV 672
>gi|322702069|gb|EFY93817.1| DNA ligase I, ATP-dependent family protein [Metarhizium acridum
CQMa 102]
Length = 987
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 226/691 (32%), Positives = 355/691 (51%), Gaps = 84/691 (12%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++R +F++ + V D++ ALRLILP DR+RG YGLKE+ + L+ + +
Sbjct: 85 PQEQRRHIIERFINRWRKEVGNDFYPALRLILPDKDRDRGVYGLKENAIGKLLVKLMKID 144
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L++W+ G AA AG+F EV+ +R I G +TI E+N+ LD+LA
Sbjct: 145 KNSEDGYNLLHWKLPGQTMAARLAGDFAGRCYEVISKRPMRIEVGDMTIAEVNEQLDKLA 204
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
+S AE + V T + NA+EM W+I IILK +K+G +EK+ + +HPD E LF+V+
Sbjct: 205 ASAGEAENLRVFETFYNRMNAEEMLWLIRIILKQMKVGATEKTFLYLWHPDGETLFSVSS 264
Query: 198 DLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAWRKL--------HGKEV 247
L+ VC +L D + R ++++ I + + +PQLA A+++K+ E
Sbjct: 265 SLRRVCWELYDPDVRLEQEEAGISLMQCFQPQLAQF--QMPASFQKMTELLRPTEDDPEF 322
Query: 248 VIECKFDGDRIQIHKNGSEIH-------YFSRSFLDHSE-YGHAMSKIIEQNVLVDR--- 296
IE K DG+R+Q+H H ++SR D++ YG ++++N + R
Sbjct: 323 WIEEKLDGERMQMHMVADAAHPGGKRFCFWSRKAKDYTYLYGDG---VLDENSSLTRHLK 379
Query: 297 ---------CILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS----SDRQLCYFAFDV 343
ILDGEM+ WD ++++ FG+ + A A + S S + Y FD+
Sbjct: 380 DAFAPGVRNLILDGEMITWDMAVDKIVPFGTLKTAAIAEQQNKSGSDASGHRPVYRVFDI 439
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
LY+ D + +L++RH L+K +KP RLE +++H A D
Sbjct: 440 LYLNDKPLTQYTLRDRHRALEKAIKPVHRRLE-------IHTHKS----------ATTAD 482
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYG 462
+E +E + N EG+VLK+ S + R+ WLK+KPEY+ G LD L+IGGYYG
Sbjct: 483 AIEPMLREVVANASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCLVIGGYYG 542
Query: 463 SGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
SG+RGG ++ FL L P + SF +VG G E+ + + + +
Sbjct: 543 SGKRGGTLSSFLCGLRVSQNHIQAGDNPEKCYSFFKVGGGFRGEDYAEIRHRTEGKW--V 600
Query: 520 EYPKRAPPSFYQVTNNSK----ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 575
E+ +R PP+ Y + ERPDVWI P S++LS + S+ F+ Y+LRF
Sbjct: 601 EWDRRKPPTEYIELGGGESKQFERPDVWIR-PRDSVVLSAKA-ASVGPSDSFAMGYTLRF 658
Query: 576 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNV 635
PR R+R D+ W L V F EL + ++ KE +D+ R + K K++V
Sbjct: 659 PRFRRLRLDRAWDSALSVDEFEELKRQVD---REAKEKAMTVEDRR---RRNPKRAKRSV 712
Query: 636 SIVPSHFLQTDVSDIKGETS-IFSDMVFCIL 665
IV + +GE S +F + FC+L
Sbjct: 713 VIVGE---DATAVEFRGEASHVFDGLEFCVL 740
>gi|403348596|gb|EJY73737.1| DNA ligase [Oxytricha trifallax]
Length = 1144
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 220/674 (32%), Positives = 348/674 (51%), Gaps = 101/674 (14%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDY---FSALRLILPSLDRERGSYGLKES 68
+ L + + +++ +K KF++ + + D+ F +RL++ +LDRERG+YGLKES
Sbjct: 37 FIQLLDRLGQSQKTQQKLLLIEKFIEQFYSAHDHRQIFQFMRLLMSNLDRERGNYGLKES 96
Query: 69 VLANCLIDALGMSKDSADAVRLINWRKGGAAP---NAGNFPMVAAEVLQRRQGMISGGLT 125
LA + L + A+A RL +W+ P AG+F V V++ R LT
Sbjct: 97 ALAKFYSEILLLP--PAEADRLKHWKNPTKQPIGSPAGDFVGVLVHVMKNR-ARNDSKLT 153
Query: 126 IKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEF 185
+ +LN LLD+LA S + +K +L+ +++ T E KWI IILKDLK+GI ++I +
Sbjct: 154 LNQLNQLLDQLARSFDNEKKKQILARIVQDTTIDEQKWIARIILKDLKIGIGYETILKSY 213
Query: 186 HPDAEDLFNVTCDLKLVCEKLKDRNQRHK------RQDIEVGKAVRPQLAMRIGDAHAAW 239
HPDA +LFN T DL+ V E+L+ + + + +Q + ++P LA ++ A
Sbjct: 214 HPDALELFNATSDLRSVFEELQVQEDQVRQGSGGNQQMFRMFFPIKPMLAGKLAPQQIAE 273
Query: 240 RKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVLVDRCI 298
+V+IE KFDG+RIQ H + +F+R+ +++ YG MSK I++NV I
Sbjct: 274 MVRKEGKVLIENKFDGERIQCHMQDGVVKFFTRNSNNYTRIYGPGMSKYIKENVDAQAVI 333
Query: 299 LDGEMLVWDTSLNRFAEFGSNQEIA----------------------------------- 323
LDGEM+VWD N+ A FG N+++A
Sbjct: 334 LDGEMIVWDNQKNQVAPFGQNKQVALREYGVYENAPPEKPFKVKQQHQQDGDNQSETTKS 393
Query: 324 KAARDGLSSDRQLCYFAFDVLYV---GDTSVIH---QSLKERHELLQKVVKPSKGRLETL 377
++A DG S QLCY FD+LY+ GD+ I+ L++R +L +++K LE
Sbjct: 394 QSAADG--SHLQLCYKVFDILYIKAHGDSEEINLMGARLQDRKTVLSRIIKEVPNTLEI- 450
Query: 378 VPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK 437
G+ C VD+V F ++I +EGI++K + S ++P +RS
Sbjct: 451 -----------EMGKEC-----ETVDQVFDEFNQSIYKNEEGIIIKKIESVYKPNERSVN 494
Query: 438 WLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGG------EVAQFLVALA---ERPAPDT-- 485
W+KLK EYI + G LD+++IGGY+G +R G + FLV + ++ P
Sbjct: 495 WIKLKGEYIDSLGDTLDLIVIGGYFGERKRIGGNDWTDHINVFLVGVMKKLDKQNPQNCV 554
Query: 486 -YPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFY-QVTNNSKERPDVW 543
YP F RVGTG S +EL + +LKPY++ Y+ R PP+ Y + + +RPDV+
Sbjct: 555 VYP-----FSRVGTGYSMDELSKLRNQLKPYWKMYD--ARMPPALYGRWVPSMSDRPDVY 607
Query: 544 IESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCL---DVQSFVELV 600
I KS+IL I + + S+ + Y+LRFPR+ ++RYDK W + D+Q ++
Sbjct: 608 ITDVSKSVILEIRAG-ELVVSDQYPTMYTLRFPRVLKIRYDKNWDEAFSHYDLQDMIKNF 666
Query: 601 HSSNGTTQKGKEYG 614
S +K G
Sbjct: 667 QESRRLKKKDNAKG 680
>gi|322703017|gb|EFY94634.1| DNA ligase I, ATP-dependent family protein [Metarhizium anisopliae
ARSEF 23]
Length = 987
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 223/691 (32%), Positives = 353/691 (51%), Gaps = 84/691 (12%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++R +F++ + V D++ ALRLILP DR+RG YGLKE+ + L+ + +
Sbjct: 85 PQEQRRHIIERFINRWRKEVGNDFYPALRLILPDKDRDRGVYGLKENAIGKLLVKLIKID 144
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L++W+ G AA AG+F EV+ +R I G +TI E+N+ LD+LA
Sbjct: 145 KNSEDGYNLLHWKLPGQTMAARLAGDFAGRCYEVISKRPMRIEVGDMTIAEVNEQLDKLA 204
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
+S AE + V T + NA+EM W+I IILK +K+G +EK+ + +HPD E LF+V+
Sbjct: 205 ASAGEAENLRVFETFYNRMNAEEMLWLIRIILKQMKVGATEKTFLYLWHPDGETLFSVSS 264
Query: 198 DLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAWRKL--------HGKEV 247
L+ VC +L D + R ++++ I + + +PQLA A+++K+ E
Sbjct: 265 SLRRVCWELYDPDVRLEQEEAGISLMQCFQPQLAQF--QMPASFQKMTELLRPTEDDAEF 322
Query: 248 VIECKFDGDRIQI-------HKNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVLVDR--- 296
IE K DG+R+Q+ H G ++SR D++ YG ++++N + R
Sbjct: 323 WIEEKLDGERMQMHMVADASHPGGKRFCFWSRKAKDYTYLYGDG---VLDENSSLTRHLK 379
Query: 297 ---------CILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS----SDRQLCYFAFDV 343
ILDGEM+ WD ++++ FG+ + A A + S S + Y FD+
Sbjct: 380 DAFAPGVRNLILDGEMITWDMAVDKIVPFGTLKTAAIAEQQNKSGSDASGHRPLYRVFDI 439
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
+Y+ D + +L++RH L+K ++P RLE H S A D
Sbjct: 440 VYLNDKPLTQYTLRDRHRALEKAIRPVHRRLEI----HAYKS-------------ATTAD 482
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYG 462
+E +E + + EG+VLK+ S + R+ WLK+KPEY+ G LD L+IGGYYG
Sbjct: 483 AIEPMLREVVASASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCLVIGGYYG 542
Query: 463 SGRRGGEVAQFLVALAERP----APDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 518
SG+RGG ++ FL L P A D P + SF +VG G E+ + + + +
Sbjct: 543 SGKRGGTLSSFLCGLRVSPNHIQAGDN-PEKCYSFFKVGGGFRGEDYAEIRHRTEGKW-- 599
Query: 519 YEYPKRAPPSFYQVTNNSK----ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLR 574
E+ +R PP+ Y + ERPDVWI P S++LS + S+ F+ Y+LR
Sbjct: 600 VEWDRRNPPTEYVELGGGEGRQLERPDVWIR-PRDSVVLSAKA-ASVGPSDSFAMGYTLR 657
Query: 575 FPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKN 634
FPR R+R D+ W L V F EL + ++ +E +D R R ++
Sbjct: 658 FPRFRRLRLDRAWDSALSVDEFEELKRQVD---REAREKAMTVED-----RKRRHPKRAK 709
Query: 635 VSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
S+V + T V+ + +F + FC+L
Sbjct: 710 RSVVIAGEDATAVASRGAASHVFDGLEFCVL 740
>gi|353235464|emb|CCA67477.1| probable DNA ligase [Piriformospora indica DSM 11827]
Length = 991
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 210/675 (31%), Positives = 352/675 (52%), Gaps = 55/675 (8%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKES 68
V+ LF+ +Q + K+R+ ++ + + V + + ALRL+LP D+ER Y +KE+
Sbjct: 42 VITLLFDVLQAERKQDKRRAILDRWFQLWREKVGPNLYPALRLLLPQKDKERAIYHIKEA 101
Query: 69 VLANCLIDALGMSKDSADAVRLINWRK--GGAAPNAGNFPMVAAEVLQRRQGMISGGLTI 126
+A LI LG+ K + D+V L W++ G AG+FP + EV+ +R + G L I
Sbjct: 102 NIAKALISVLGLEK-APDSVALTQWKRPTGHQKSAAGDFPGLVYEVVAKRSSVTEGTLRI 160
Query: 127 KELNDLLDRLASSENRAE-KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEF 185
+LN LLD L+ ++ E + + LI+K E++WI+ IILKDL +G+ E ++F F
Sbjct: 161 DQLNALLDDLSKRGSKMEHQRRIFQELIQKCTPAEIRWIVRIILKDLSVGVKETTVFSVF 220
Query: 186 HPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMR-IGDAHAAWRKL 242
HPDA +FN T DLK V +L D +Q D ++V + P L+ + + A ++
Sbjct: 221 HPDATAVFNSTSDLKRVAYQLWDPSQHIDDSDKTVQVFRCFAPMLSKKPPKNLEDAVKRF 280
Query: 243 HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKIIEQNVLVD- 295
+G +E K DG+RIQ+HK G++ Y SR D++ YG +++ I + D
Sbjct: 281 NGDTFKVEEKLDGERIQLHKRGNQYFYCSRKSKDYTYLYGKSPEEGSLTPFIHEAFHPDV 340
Query: 296 -RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQ 354
CILDGEMLVWD R+ FG+ + A + C+ FD+LY+ S+ +
Sbjct: 341 KECILDGEMLVWDPISERYLPFGTLKSHAGDKLIKGDYHPRPCFKVFDLLYLNGRSLTNM 400
Query: 355 SLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIE 414
+L++R L V +GRL+ + A VD V+ + +E
Sbjct: 401 ALEDRRMNLLNVFSEVEGRLQIMK-----------------QYDASTVDGVKSLLRRVME 443
Query: 415 NRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQF 473
+R EG++LK S + R W+K+KPEY+ G D+L++GG +G+G+RGG V+ F
Sbjct: 444 DRGEGLILKHPRSPYVLNGRVDHWIKIKPEYMDGQGETFDLLVLGGNFGTGKRGGGVSTF 503
Query: 474 LVALA-ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV 532
+ AL +R + + +F R+GTGLS D V+ + KP+ ++ K PP F Q
Sbjct: 504 ICALRDDRSGAPGDGKMWSTFARIGTGLS--FADYVIIRAKPW---TDWGKNGPP-FLQS 557
Query: 533 T--NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDC 590
N+ ++ D++++ PE + ++++ + ++ + PY+LRFPR R+R + D
Sbjct: 558 APRANTDDKCDLYLK-PEDAFVVTVKA-AEITGTDQYHMPYTLRFPRAVRIRDEFTAEDA 615
Query: 591 LDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDI 650
V E ++S G +K +E QD P + R++ K+ +++V S F + S
Sbjct: 616 ATVSELFEYINS--GKKRKQEE----QDGGPSKKRNTG---KRKIAVVSSAFQASKDSLT 666
Query: 651 KGETSIFSDMVFCIL 665
+ IF+ F ++
Sbjct: 667 TSASDIFAGKTFLVI 681
>gi|301117706|ref|XP_002906581.1| DNA ligase, putative [Phytophthora infestans T30-4]
gi|262107930|gb|EEY65982.1| DNA ligase, putative [Phytophthora infestans T30-4]
Length = 971
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 214/673 (31%), Positives = 348/673 (51%), Gaps = 82/673 (12%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRL--INWRKGGAAPN 101
D + +RL+LP LDRER +Y LKE +A ID LG++ S DA +L N K + +
Sbjct: 55 DLYPLIRLVLPQLDRER-TYMLKEKKIAKIYIDVLGLAPISKDAQKLEHFNDPKIVDSKS 113
Query: 102 AGNFPMVAAEVL--QRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQ 159
G+F V +V+ Q + T++++N LLDRL ++N A + V L + +A
Sbjct: 114 VGDFAAVLFDVVLYQSARTKSKTHHTLEDVNTLLDRLVQADNNAARKKVFMKLATEYSAD 173
Query: 160 EMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIE 219
E KWII +ILKDLK+G+ + + HPDA +++N T DL VC++L++ R+ Q +E
Sbjct: 174 EQKWIIRVILKDLKIGLRHERVLKFIHPDAMEMYNHTNDLHKVCKELRNSAVRYVPQ-LE 232
Query: 220 VGKAVRPQLAMRI--GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDH 277
+ P LA R+ G+ +A ++ V+E K DG+RI H G E+ + SR+ +++
Sbjct: 233 PFQVFTPMLAKRVNFGECISA---INADAFVMEPKLDGERITCHVQGKEVQFISRNGINY 289
Query: 278 SE-YG-----HAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS 331
+E Y H +S+ +E + CILDGEM+VWD + R EFG + A A R G +
Sbjct: 290 TENYAPSIKPHVLSQ-LEPGI---DCILDGEMMVWDNTEYRLREFGLLKNTANAVRKGEA 345
Query: 332 SDRQLCYFAFDVLYVGD------------------TSVIHQSLKERHELLQKVVKPSKGR 373
++R LCY +DV+YVG ++V+ L R +LL +++KP R
Sbjct: 346 TNRWLCYVVWDVVYVGGGPKAEQLIREVFKDPGEISAVMGLPLHARRKLLLRILKPLDHR 405
Query: 374 L----ETLVPDHGLNS-HVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK 428
+ + LV D H + E VD + + N EG+++KDL +
Sbjct: 406 IIIIEQKLVNDKSAKERHEKVMAE---------VD-------QQVSNGGEGVIMKDLNAH 449
Query: 429 WEPGD---RSGKWLKLKPEYIRAGSDLDVLIIGGYYGSG-RRGGEVAQFLVAL------- 477
+ G+ ++ KWLKLKP+Y +DLDV+I+GG+YG+G RR G V+ FL+ +
Sbjct: 450 YMCGESSRKAKKWLKLKPDYAGMTTDLDVIIVGGFYGTGRRRSGNVSVFLLGVLAHSLDE 509
Query: 478 ---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN 534
AE P +F +VGTG + EEL+ + +L+PY++ ++
Sbjct: 510 KKAAEATKPGAACPVVYTFAKVGTGYNLEELEQMRQELEPYWQPWDDDNVPSHLNGWKPQ 569
Query: 535 NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQ 594
S RPDVWI+ P S IL + + ++ ++RFPR +R DK W+ C+D+Q
Sbjct: 570 KSDLRPDVWID-PRHSKILEVYG-FELSFTTLYQTGLTIRFPRCKAIRNDKEWYQCIDLQ 627
Query: 595 SFVELVHSSNG--TTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKG 652
++++ G +T++ E Q K+ + + + + V + + D+ I+
Sbjct: 628 D----LNAARGSLSTKRASEVALGQKSATKRIKKRQTVSARRPNGVLQDYSRADLEGIEQ 683
Query: 653 ETSIFSDMVFCIL 665
E ++F M FC+L
Sbjct: 684 ERNVFEGMEFCVL 696
>gi|121799815|sp|Q2U6A1.1|DNLI4_ASPOR RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|83772786|dbj|BAE62914.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1006
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 210/679 (30%), Positives = 350/679 (51%), Gaps = 65/679 (9%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P K+R +F+ + V D + A RLILP DR+R YG+KE + LI + +
Sbjct: 79 PLEKRRDIIDRFISRWRKEVGDDIYPAFRLILPDKDRDRAMYGMKEKAIGKLLIRIMKID 138
Query: 82 KDSADAVRLINWRKGGAAPN---AGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S DA+ L+NW+ G AG+F VL +R G +TI+E+N+ LD L+
Sbjct: 139 KNSEDALNLLNWKLPGQTTTSSMAGDFAGRCFGVLSKRPMRTEVGDMTIEEVNEKLDHLS 198
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
++ +++ +L+ ++ N +E+ W+I IIL+ +K+G +E++ F FHPDAE+L++++
Sbjct: 199 AASKENQQLPILTEFYRRMNPEELMWLIRIILRQMKVGATERTFFDVFHPDAENLYSISS 258
Query: 198 DLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLA---MRIGDAHAAWRKLHGKEVV--IE 250
L+ VC +L D N R + +D I + + +PQLA M D + +L + V IE
Sbjct: 259 SLRRVCWELHDPNIRLEAEDRGITLMQCFQPQLAQFQMHSLDRMISRMRLTEDDPVFWIE 318
Query: 251 CKFDGDRIQIHKN-------GSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNVL-- 293
K DG+R+Q+H + G ++SR D++ YG+ A+++ +
Sbjct: 319 EKLDGERMQLHMDSNDSVPGGRTFRFWSRKAKDYTYLYGNGIQDENGALTRYLSDAFADG 378
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYFAFDVLYVGDTSVI 352
V+ ILDGEM+ WDT + A FG+ + A R+ SS + + FD+LY+ +
Sbjct: 379 VESLILDGEMITWDTEQDAIAPFGTLKTAALSEQRNPYSSTTRPLFRIFDILYLNGRDLT 438
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
+L++R LQK +KP R E + P E A E+E+ +
Sbjct: 439 RYTLRDRRNALQKSIKPVYRRFE-----------IHPYEE------ATGKTEIEEALRRV 481
Query: 413 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVA 471
+E EG+VLK+ S + +R W+K+KPEY+ G LDV++IGGYYGSG RGG ++
Sbjct: 482 VEEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDVVVIGGYYGSGHRGGGLS 541
Query: 472 QFLVALAERPAPDT---YPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
FL L A + + SFC+VG G + D + + +E+ R PP+
Sbjct: 542 SFLCGLRVDDAHSSQGMVASKCYSFCKVGGGFT--AADYANIRHHTDGKWHEWKSRKPPT 599
Query: 529 FY---QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
Y + ERPD+WI+ PE S++L + + + S+ F +LRFPR ++R DK
Sbjct: 600 TYIELAGGDAQYERPDMWIK-PEDSVVLCVKAASVAV-SDQFRIGLTLRFPRFKKLRMDK 657
Query: 586 PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQT 645
W L VQ F++L +N ++ ++ + + + K+ +++ KK ++IV + +
Sbjct: 658 DWKSALSVQEFLDL--KANAERERKEKEFNVDNSRKKR---AKRDNKKPLAIV-GYSAEA 711
Query: 646 DVSDIKGETSIFSDMVFCI 664
+ +IF + F I
Sbjct: 712 EAQYTGPSGNIFEGLNFYI 730
>gi|134117319|ref|XP_772886.1| hypothetical protein CNBK2570 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255504|gb|EAL18239.1| hypothetical protein CNBK2570 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|269935941|dbj|BAI49988.1| DNA ligase IV [Cryptococcus neoformans var. neoformans]
Length = 1079
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 216/667 (32%), Positives = 345/667 (51%), Gaps = 80/667 (11%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPN- 101
D + +RL+LP DRER Y LKES+LA C ID L + K S A RLI W++ G +PN
Sbjct: 81 DLYPLIRLLLPDKDRERPVYNLKESMLARCYIDILSLEKHSEAAQRLIKWKQPAGNSPNP 140
Query: 102 AGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSE-NRAEKISVLSTLIKKTNAQE 160
G+F V ++ R + G L+++ +N LLD+LA + + + + +L + + A+E
Sbjct: 141 TGDFAKVCYNEIKARSTVEEGQLSVEAVNMLLDKLAVGKMKQKDYVPILKAINMQCTAEE 200
Query: 161 MKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD--I 218
+WII IILKDL + I E+ + FHPDA DL+NV DLK VC L D R + + +
Sbjct: 201 QEWIIRIILKDLHISIRERGVLSAFHPDAIDLYNVCSDLKRVCWTLYDPGFRLNKNETHL 260
Query: 219 EVGKAVRPQLAMRIGDA---HAAWRKLHGKEVVIECKFDGDRIQIHK--NGSEIHYFSRS 273
E+ + PQL R+ DA + A KE ++E K DG+RIQ+H NG++ Y SR
Sbjct: 261 ELFHSFLPQLCGRMNDASLENIAKAIGAPKEFIMEEKLDGERIQLHMRGNGAQWFYCSRK 320
Query: 274 FLDHSE-YG---------HAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIA 323
D++ YG H ++ + NV ILDGEM+VWD + R+ FG+ +
Sbjct: 321 AKDYTYLYGAHPGEGSLTHYIATAFQDNVR--NVILDGEMMVWDPVVERYLAFGT---LK 375
Query: 324 KAARDGLSSDR--QLCYFAFDVLYVGDTSVIHQSLKERHELLQ-----KVVKPSKGRLET 376
AA D + + + C+ FD+L++ D + + L ER LL+ K ++ KGRLE
Sbjct: 376 SAALDHFNDETAPRPCFKVFDILFLNDHCLSRKRLSERKRLLRSGKIFKNIESYKGRLEF 435
Query: 377 LVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSG 436
+ G N ++ ++ + +E + EG+V+K ++ R
Sbjct: 436 VDEKRG-----------------KNAKDIREYLERVVETKGEGLVVKKTDVIYQTNSRGY 478
Query: 437 KWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRR--FISF 493
W+K+KPEY + G +L+VL++GG++G G R G++++ L L E+ D R F +F
Sbjct: 479 DWIKVKPEYSDQMGENLEVLVLGGWWGKGGRSGKISRLLCGLREQAFDDGTVERPSFKTF 538
Query: 494 CRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN-NSKERPDVWIESPEKSII 552
C +G+G+S + + ++ K K +++ ++ + PP F ++ ++PDV+IE PE S +
Sbjct: 539 CSIGSGMSYSDYEWILNKHKKHWKPFD--RSNPPPFMKLGPVGLDDKPDVYIE-PENSFV 595
Query: 553 LSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHD--------------CLDVQSFVE 598
+ + + + + + ++LRFPR + YDK D + V F++
Sbjct: 596 IEVKAS-EIVPAGGYGIGFTLRFPRCKYIYYDKNSRDYALDDESKERDMWTSMSVDDFMD 654
Query: 599 LVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFS 658
L + + G + K K RS KKN I S+F +SD ETSIFS
Sbjct: 655 LFSRPKRSYDDSQ--GPGKRKKRKVIRS-----KKNHLI--SNFRGQKLSDADVETSIFS 705
Query: 659 DMVFCIL 665
DM F I+
Sbjct: 706 DMTFYIV 712
>gi|392580238|gb|EIW73365.1| hypothetical protein TREMEDRAFT_67336 [Tremella mesenterica DSM
1558]
Length = 1047
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 218/692 (31%), Positives = 354/692 (51%), Gaps = 79/692 (11%)
Query: 21 KTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDAL 78
+++ +K++ +F + + V D + +RL+LP DRER Y LKE++LA C I+ L
Sbjct: 64 RSEEMSKRKDTLTRFFNLWRIKVGNDLYPLIRLLLPERDRERPVYNLKEAMLAKCYIEVL 123
Query: 79 GMSKDSADAVRLINWRK---GGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDR 135
G+ K SA A +L+ W++ G +G+F V + R + G LT++ +N LLD+
Sbjct: 124 GLDKHSAAAQKLVKWKQPVDGETDGISGDFARVCYHEIAARSTVEEGTLTLEAVNALLDQ 183
Query: 136 LASSE-NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFN 194
LA +AE + +L ++ ++ E +WII IILKDL++ I EK +F FHPDA DLFN
Sbjct: 184 LAGGRMKQAEYVPILRSINRQCTPVEQEWIIRIILKDLRISIREKGVFSCFHPDAADLFN 243
Query: 195 VTCDLKLVCEKLKDRNQRHKRQ--DIEVGKAVRPQLAMRI-GDAHAAWRKLHG---KEVV 248
V DLK VC L + R ++ +IE+ ++ PQL R AH A +L G +E V
Sbjct: 244 VCSDLKRVCWTLYKPDVRLEKNQTNIELFRSFLPQLCYRSPSSAHDAIARLVGAPNQEFV 303
Query: 249 IECKFDGDRIQIHK--NGSEIHYFSRSFLDHSE-YG-HAMSKIIEQNVL------VDRCI 298
+E K DG+R+Q+H NG++ Y SR D++ YG H + Q++ V I
Sbjct: 304 MEEKLDGERMQLHMRGNGAQWFYCSRKAKDYTYLYGAHIGEGSLTQHIAGAFHDDVRNII 363
Query: 299 LDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR--QLCYFAFDVLYVGDTSVIHQSL 356
LDGEMLVWD L ++ FG + A+D + D + C+ FD+LY+ D + + L
Sbjct: 364 LDGEMLVWDPQLEKYLAFGV---LKTFAQDKIIDDTAPRPCFKVFDILYLNDKCLTGKRL 420
Query: 357 KERHELLQ-----KVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
ER LL K + KGRLE + G + ++ ++
Sbjct: 421 SERKRLLHSNRVFKDIDQYKGRLEFAAEERGKSGK-----------------DIRAMLEK 463
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEV 470
+E+R EG+V+K L S ++ R W+K+KPEY + G LDV+++GG++G G R G++
Sbjct: 464 ILESRGEGLVVKKLDSTYQTNSRGQDWVKVKPEYADQMGETLDVMVLGGWWGKGGRTGKL 523
Query: 471 AQFLVAL--AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
+ L L D +F +FCRVG+G+S + + ++ K + +++ ++ + PPS
Sbjct: 524 SSMLCGLRVQRDDEGDGGIPQFATFCRVGSGMSYSDYEWILNKHREHWKTFK--RSNPPS 581
Query: 529 FYQVTN-NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 587
+ ++ + PDV+IE PE S ++ + + + F Y+LRFPR + YD
Sbjct: 582 WMKMGEIGLDDSPDVYIE-PEHSFVMQVKASEIVPATGNFGIGYTLRFPRCKFIFYDTAS 640
Query: 588 HD--------------CLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKK 633
D CL V+ F EL++ ++Y +DD+ R RK +
Sbjct: 641 RDHPVEDPEMERDMWNCLSVEEFTELLNKPK------RKY---EDDEQGSKRRKRKPVTR 691
Query: 634 NVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ S +S + E+ IF +M F ++
Sbjct: 692 TKVQLISSVKGQLLSQEEVESGIFDNMKFYVV 723
>gi|317150466|ref|XP_001824047.2| hypothetical protein AOR_1_564094 [Aspergillus oryzae RIB40]
Length = 1822
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 210/679 (30%), Positives = 350/679 (51%), Gaps = 65/679 (9%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P K+R +F+ + V D + A RLILP DR+R YG+KE + LI + +
Sbjct: 79 PLEKRRDIIDRFISRWRKEVGDDIYPAFRLILPDKDRDRAMYGMKEKAIGKLLIRIMKID 138
Query: 82 KDSADAVRLINWRKGGAAPN---AGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S DA+ L+NW+ G AG+F VL +R G +TI+E+N+ LD L+
Sbjct: 139 KNSEDALNLLNWKLPGQTTTSSMAGDFAGRCFGVLSKRPMRTEVGDMTIEEVNEKLDHLS 198
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
++ +++ +L+ ++ N +E+ W+I IIL+ +K+G +E++ F FHPDAE+L++++
Sbjct: 199 AASKENQQLPILTEFYRRMNPEELMWLIRIILRQMKVGATERTFFDVFHPDAENLYSISS 258
Query: 198 DLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLA---MRIGDAHAAWRKLHGKEVV--IE 250
L+ VC +L D N R + +D I + + +PQLA M D + +L + V IE
Sbjct: 259 SLRRVCWELHDPNIRLEAEDRGITLMQCFQPQLAQFQMHSLDRMISRMRLTEDDPVFWIE 318
Query: 251 CKFDGDRIQIHKN-------GSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNVL-- 293
K DG+R+Q+H + G ++SR D++ YG+ A+++ +
Sbjct: 319 EKLDGERMQLHMDSNDSVPGGRTFRFWSRKAKDYTYLYGNGIQDENGALTRYLSDAFADG 378
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYFAFDVLYVGDTSVI 352
V+ ILDGEM+ WDT + A FG+ + A R+ SS + + FD+LY+ +
Sbjct: 379 VESLILDGEMITWDTEQDAIAPFGTLKTAALSEQRNPYSSTTRPLFRIFDILYLNGRDLT 438
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
+L++R LQK +KP R E + P E A E+E+ +
Sbjct: 439 RYTLRDRRNALQKSIKPVYRRFE-----------IHPYEE------ATGKTEIEEALRRV 481
Query: 413 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVA 471
+E EG+VLK+ S + +R W+K+KPEY+ G LDV++IGGYYGSG RGG ++
Sbjct: 482 VEEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDVVVIGGYYGSGHRGGGLS 541
Query: 472 QFLVALAERPAPDT---YPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
FL L A + + SFC+VG G + D + + +E+ R PP+
Sbjct: 542 SFLCGLRVDDAHSSQGMVASKCYSFCKVGGGFT--AADYANIRHHTDGKWHEWKSRKPPT 599
Query: 529 FY---QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
Y + ERPD+WI+ PE S++L + + + S+ F +LRFPR ++R DK
Sbjct: 600 TYIELAGGDAQYERPDMWIK-PEDSVVLCVKAASVAV-SDQFRIGLTLRFPRFKKLRMDK 657
Query: 586 PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQT 645
W L VQ F++L +N ++ ++ + + + K+ +++ KK ++IV + +
Sbjct: 658 DWKSALSVQEFLDL--KANAERERKEKEFNVDNSRKKR---AKRDNKKPLAIV-GYSAEA 711
Query: 646 DVSDIKGETSIFSDMVFCI 664
+ +IF + F I
Sbjct: 712 EAQYTGPSGNIFEGLNFYI 730
>gi|238499783|ref|XP_002381126.1| DNA ligase, putative [Aspergillus flavus NRRL3357]
gi|220692879|gb|EED49225.1| DNA ligase, putative [Aspergillus flavus NRRL3357]
Length = 980
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 206/644 (31%), Positives = 334/644 (51%), Gaps = 60/644 (9%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P K+R +F+ + V D + A RLILP DR+R YG+KE + LI + +
Sbjct: 53 PLEKRRDIIDRFISRWRKEVGDDIYPAFRLILPDKDRDRAMYGMKEKAIGKLLIRIMKID 112
Query: 82 KDSADAVRLINWRKGGAAPN---AGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S DA+ L+NW+ G AG+F VL +R G +TI+E+N+ LD L+
Sbjct: 113 KNSEDALNLLNWKLPGQTTTSSMAGDFAGRCFGVLSKRPMRTEVGDMTIEEVNEKLDHLS 172
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
++ +++ +L+ ++ N +E+ W+I IIL+ +K+G +E++ F FHPDAE+L++++
Sbjct: 173 AASKENQQLPILTEFYRRMNPEELMWLIRIILRQMKVGATERTFFDVFHPDAENLYSISS 232
Query: 198 DLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLA---MRIGDAHAAWRKLHGKEVV--IE 250
L+ VC +L D N R + +D I + + +PQLA M D + +L + V IE
Sbjct: 233 SLRRVCWELHDPNIRLEAEDRGITLMQCFQPQLAQFQMHSLDRMISRMRLTEDDPVFWIE 292
Query: 251 CKFDGDRIQIHKN-------GSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNVL-- 293
K DG+R+Q+H + G ++SR D++ YG+ A+++ +
Sbjct: 293 EKLDGERMQLHMDSNDSVPGGRTFRFWSRKAKDYTYLYGNGIQDENGALTRYLNDAFADG 352
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYFAFDVLYVGDTSVI 352
V+ ILDGEM+ WDT + A FG+ + A R+ SS + + FD+LY+ +
Sbjct: 353 VESLILDGEMITWDTEQDAIAPFGTLKTAALSEQRNPYSSTTRPLFRIFDILYLNGRDLT 412
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
+L++R LQK +KP R E + P E A E+E+ +
Sbjct: 413 RYTLRDRRNALQKSIKPVYRRFE-----------IHPYEE------ATGKTEIEEALRRV 455
Query: 413 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVA 471
+E EG+VLK+ S + +R W+K+KPEY+ G LDV++IGGYYGSG RGG ++
Sbjct: 456 VEEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDVVVIGGYYGSGHRGGGLS 515
Query: 472 QFLVALAERPAPDT---YPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
FL L A + + SFC+VG G + D + + +E+ R PP+
Sbjct: 516 SFLCGLRVDDAHSSQGMVASKCYSFCKVGGGFT--AADYANIRHHTDGKWHEWKSRKPPT 573
Query: 529 FY---QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
Y + ERPD+WI+ PE S++L + + + S+ F +LRFPR ++R DK
Sbjct: 574 TYIELAGGDAQYERPDMWIK-PEDSVVLCVKAASVAV-SDQFRIGLTLRFPRFKKLRMDK 631
Query: 586 PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 629
W L VQ F++L ++ +K KE+ K + R ++K
Sbjct: 632 DWKSALSVQEFLDLKANAE-RERKEKEFNVDNSRKKRAKRDNKK 674
>gi|391874232|gb|EIT83153.1| ATP-dependent DNA ligase IV [Aspergillus oryzae 3.042]
Length = 1006
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 206/644 (31%), Positives = 334/644 (51%), Gaps = 60/644 (9%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P K+R +F+ + V D + A RLILP DR+R YG+KE + LI + +
Sbjct: 79 PLEKRRDIIDRFISRWRKEVGDDIYPAFRLILPDKDRDRAMYGMKEKAIGKLLIRIMKID 138
Query: 82 KDSADAVRLINWRKGGAAPN---AGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S DA+ L+NW+ G AG+F VL +R G +TI+E+N+ LD L+
Sbjct: 139 KNSEDALNLLNWKLPGQTTTSSMAGDFAGRCFGVLSKRPMRTEVGDMTIEEVNEKLDHLS 198
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
++ +++ +L+ ++ N +E+ W+I IIL+ +K+G +E++ F FHPDAE+L++++
Sbjct: 199 AASKENQQLPILTEFYRRMNPEELMWLIRIILRQMKVGATERTFFDVFHPDAENLYSISS 258
Query: 198 DLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLA---MRIGDAHAAWRKLHGKEVV--IE 250
L+ VC +L D N R + +D I + + +PQLA M D + +L + V IE
Sbjct: 259 SLRRVCWELHDPNIRLEAEDRGITLMQCFQPQLAQFQMHSLDRMISRMRLTEDDPVFWIE 318
Query: 251 CKFDGDRIQIHKN-------GSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNVL-- 293
K DG+R+Q+H + G ++SR D++ YG+ A+++ +
Sbjct: 319 EKLDGERMQLHMDSNDSVPGGRTFRFWSRKAKDYTYLYGNGIQDENGALTRYLNDAFADG 378
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYFAFDVLYVGDTSVI 352
V+ ILDGEM+ WDT + A FG+ + A R+ SS + + FD+LY+ +
Sbjct: 379 VESLILDGEMITWDTEQDAIAPFGTLKTAALSEQRNPYSSTTRPLFRIFDILYLNGRDLT 438
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
+L++R LQK +KP R E + P E A E+E+ +
Sbjct: 439 RYTLRDRRNALQKSIKPVYRRFE-----------IHPYEE------ATGKTEIEEALRRV 481
Query: 413 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVA 471
+E EG+VLK+ S + +R W+K+KPEY+ G LDV++IGGYYGSG RGG ++
Sbjct: 482 VEEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDVVVIGGYYGSGHRGGGLS 541
Query: 472 QFLVALAERPAPDT---YPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
FL L A + + SFC+VG G + D + + +E+ R PP+
Sbjct: 542 SFLCGLRVDDAHSSQGMVASKCYSFCKVGGGFT--AADYANIRHHTDGKWHEWKSRKPPT 599
Query: 529 FY---QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
Y + ERPD+WI+ PE S++L + + + S+ F +LRFPR ++R DK
Sbjct: 600 TYIELAGGDAQYERPDMWIK-PEDSVVLCVKAASVAV-SDQFRIGLTLRFPRFKKLRMDK 657
Query: 586 PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 629
W L VQ F++L ++ +K KE+ K + R ++K
Sbjct: 658 DWKSALSVQEFLDLKANAE-RERKEKEFNVDNSRKKRAKRDNKK 700
>gi|346971104|gb|EGY14556.1| DNA ligase [Verticillium dahliae VdLs.17]
Length = 1012
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 211/687 (30%), Positives = 353/687 (51%), Gaps = 75/687 (10%)
Query: 21 KTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDAL 78
K P+ ++R +F+ + V D++ A+RLILP DR+RG YGLKE+ + L+ +
Sbjct: 107 KPSPSEQRRHIIDRFISRWRKDVGNDFYPAMRLILPDKDRDRGVYGLKENAIGKLLVKLM 166
Query: 79 GMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLD 134
+ K+S D L++W+ G A+ AG+F A EVL +R I G +TI ++N+LLD
Sbjct: 167 KIDKNSEDGYNLLHWKLPGQTTASRMAGDFAGRAFEVLSKRPMRIEVGDMTIADVNELLD 226
Query: 135 RLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFN 194
+LA S E + V T ++ NA+E+ W+I IILK +K+G +EK++ H +HPDAE LFN
Sbjct: 227 KLAGSSGELENLEVFETFYERMNAEELMWLIRIILKQMKVGATEKTLLHLWHPDAETLFN 286
Query: 195 VTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAWRKL--------HG 244
V+ L+ VC +L D R ++++ + + + +PQLA A+++K+
Sbjct: 287 VSSSLRRVCWELFDPQYRLEQENTGVTLMQCFQPQLAQF--QMPASFQKMVDYLRPTEED 344
Query: 245 KEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIE 289
E IE K DG+R+Q+H G ++SR D++ YG A+++ +
Sbjct: 345 PEYWIEEKLDGERMQMHMMEDASIPGGKRFCFWSRKAKDYTYLYGEGLKDDRGALTRHLG 404
Query: 290 QNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR--QLCYFAFDVLY 345
+ V ILDGEM+ WD ++ +FG+ + A A + ++ + + FD+LY
Sbjct: 405 KAFAAGVRNIILDGEMITWDPETDKIMQFGTLKTAALAEQKNPYNNTGPRPLFRVFDILY 464
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
+ D + +L++R+ L K V R+E V +H A + D +
Sbjct: 465 LNDQPLTRYTLRDRYNALSKAVVGVHRRIE--VHEHE---------------AATSADAI 507
Query: 406 EKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSG 464
E ++ + EG+VLK+ S + R+ WLK+KPEY+ G LD ++IGGYYGSG
Sbjct: 508 EPLLRKVVAEASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMTEFGESLDCVVIGGYYGSG 567
Query: 465 RRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 521
+RGG ++ +L L P + S +VG G S E+ + ++ ++
Sbjct: 568 KRGGILSTYLCGLRVGENHIKAGANPEKCFSLFKVGGGFSVEDYAEIRHHTDGKWKDWD- 626
Query: 522 PKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 581
PK+ P + ++ + E+PDVWI + ++ + S + S+ F+ ++LRFPR ++
Sbjct: 627 PKKPPNEYIELAHGFAEKPDVWIRPKDSFVLEAKASSVGP--SDQFALGFTLRFPRFRKL 684
Query: 582 RYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSH 641
R DK W L VQ F +L Q ++ +++ K R + K KK + I
Sbjct: 685 RKDKSWDQGLSVQEFQDLRRRVEEEAQ--EKTMSVENTK----RRAVKRVKKELVIA--- 735
Query: 642 FLQTDVSDIK--GETS-IFSDMVFCIL 665
TD + ++ GE S +F + FC+L
Sbjct: 736 --GTDSTPVQFEGEKSKVFEGLEFCVL 760
>gi|393240351|gb|EJD47877.1| ATP-dependent DNA ligase [Auricularia delicata TFB-10046 SS5]
Length = 1038
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 207/678 (30%), Positives = 337/678 (49%), Gaps = 56/678 (8%)
Query: 8 EVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSL--DRERGSYGL 65
E L +L + +QK + +R+ +K+ + + V L L DRER Y +
Sbjct: 40 EFGALCALLDRLQKERRQEMRRTLLQKWFALWRERVGPDLYPLLRLLLPQKDRERAVYNI 99
Query: 66 KESVLANCLIDALGMSKDSADAVRLINWRKGGA-APNAGNFPMVAAEVLQRRQGMISGGL 124
KE LA I ALG+ + D++RL+NW+K AG+FP V EV+ +R ++ G +
Sbjct: 100 KEKTLAKAFIKALGLDPKAPDSMRLMNWKKPTEKGKTAGDFPTVLYEVVSKRSSVMRGTM 159
Query: 125 TIKELNDLLDRLASSENRAEKI-SVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
+ ++N LD LA+ + +KI + + T E +WI+ IILKDL + + E +I
Sbjct: 160 RVDQVNACLDDLAACAGKLDKIMHAVRRISDATTPSEQRWIVRIILKDLIISVKETTILS 219
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDA-HAAWR 240
FHPDA LFN DLK V +L D N R QD +++ + P L R +
Sbjct: 220 VFHPDALSLFNTCSDLKRVAHQLWDENCRLNDQDKGVQLFRCFAPMLCKRPTKSLEETVA 279
Query: 241 KLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVL------ 293
+ G + +IE K DG+RIQ+HK G+E Y+SR D++ YG +S E+ L
Sbjct: 280 LMKGAKFIIEEKLDGERIQVHKRGNEYLYYSRKGKDYTYLYGKTVSS--EKASLTPYLHK 337
Query: 294 -----VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGD 348
V CILDGEMLVWD + FG + A L++ R C+ FD+LYV
Sbjct: 338 AFRGDVRDCILDGEMLVWDPVSEKLMPFGHLKTAALGNARELTNPRP-CFKIFDILYVNG 396
Query: 349 TSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKF 408
S++ + L +R L +++K +KGR+E D G H E+
Sbjct: 397 KSLLDKKLSQRKRLAHEIIKENKGRVEFSYQDEG-----------------HTAKEIRDA 439
Query: 409 FKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRG 467
++ +E R EG+V+K S+++ R W+K+KPEY+ G +DVL++GG YGSG+RG
Sbjct: 440 LQKVMEERGEGLVIKHPDSQYQLNGRVSDWIKVKPEYMDDMGETVDVLVVGGNYGSGKRG 499
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G V+ F+ A+ E ++ +F R+G+G + D + + KP+ + K+ P
Sbjct: 500 GGVSTFVCAVIEDRDNSEDDTKYSTFVRIGSGFT--YGDYLSIRAKPW---KPWGKKGPS 554
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 587
++ DV+++ PE+S ++ + + +++ + ++RFPR R+R D W
Sbjct: 555 WLITAPTGQDDKADVYLD-PEESFVVKVKA-AEITKTDQYGMKLTMRFPRAVRIRDDLDW 612
Query: 588 HDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDV 647
C+ +E+ S T++K K +D P + ++ K S + F D
Sbjct: 613 TQCMTASDILEMTAS---TSKKRK-----AEDDP-EGSKKKRKTVKKPSALSQAFKGADT 663
Query: 648 SDIKGETSIFSDMVFCIL 665
++I + IF+ M F +L
Sbjct: 664 TNILVTSDIFAGMKFHVL 681
>gi|392565431|gb|EIW58608.1| DNA ligase 4 [Trametes versicolor FP-101664 SS1]
Length = 1027
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 211/679 (31%), Positives = 349/679 (51%), Gaps = 61/679 (8%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDY--FSALRLILPSLDRERGSYGLKES 68
VLV+LF +Q + K+R + + + + Y F LRLILP DRER YGLKE
Sbjct: 50 VLVALFEKLQNERKPEKRRRLIASWFNGWRKDIGYDLFPVLRLILPQKDRERTVYGLKEK 109
Query: 69 VLANCLIDALGMSKDSADAVRLINWRKGGAA-PNAGNFPMVAAEVLQRRQGMISGGLTIK 127
LA I + + + DA+RL+NW+K +AG+FP V EV+ +R + G LTI
Sbjct: 110 NLAKAYIKLIPLDRHGPDAIRLLNWKKPTERYRSAGDFPSVLWEVVNKRNNVTEGSLTID 169
Query: 128 ELNDLLDRLASSENRAEKIS-VLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFH 186
++N +LD LA + +++ S +L + + + E +W++ IILKD+ + + E ++F FH
Sbjct: 170 DINGVLDELAQNMGKSDLQSKILQRVYNRATSDEQRWLVRIILKDMIISVKENTVFGVFH 229
Query: 187 PDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMR-IGDAHAAWRKLH 243
PDA DLFN DLK V +L D +R +D +++ +A P L R + +++
Sbjct: 230 PDAHDLFNTCSDLKKVTWELWDPERRLNDEDKAVQLFRAFAPMLCKRPTKKIEDSVKEMQ 289
Query: 244 GKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKIIEQ--NVLVD 295
G+ +IE K DG+RIQ+HK G+E Y SR D++ YG +++ I+ + +D
Sbjct: 290 GRAFIIEEKLDGERIQLHKRGNEYFYCSRKGKDYTYLYGKHVGTGSLTPYIDSAFDPRID 349
Query: 296 RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQS 355
ILDGEMLVWD R FG+ + A R + + C+ FD+LY+ TS++H+S
Sbjct: 350 EIILDGEMLVWDPVSERNLPFGT-LKTAAIDRSKKEFNPRPCFKVFDLLYLNGTSLLHKS 408
Query: 356 LKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN 415
LK R L+ V P GR+E + G + +V + I N
Sbjct: 409 LKFRKRNLRSCVIPVAGRIELVTEFEGRTAK-----------------DVRTRMDDIIGN 451
Query: 416 RDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-------LDVLIIGGYYGSGRRGG 468
R EG+V+K S++ R+ W+K+KPEY+ + + I G YGSGRR G
Sbjct: 452 RGEGLVMKHPDSEYVLNGRNKDWIKVKPEYMDNMGETVDVLVVVLTFIAAGNYGSGRRSG 511
Query: 469 EVAQFLVALAE--RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
V+ + A+ + R D ++ +F R+G+GLS D + + KP ++ R
Sbjct: 512 GVSTLICAVLDDRRVHNDDDEPKYSTFVRIGSGLS--YADYIWIRQKP----WKPWGRDA 565
Query: 527 PSFYQVTNNS-KERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
PS+ QV ++ DV++E P+ S I+ + + ++++ +++RFPR ++R D
Sbjct: 566 PSYLQVARKGHDDKGDVYLE-PQDSFIVKVKA-AEITSTDMYHLGFTMRFPRALQIRDDL 623
Query: 586 PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQT 645
DC+ + +E + S +K K K KQ R+++K +++P +
Sbjct: 624 SIADCMTASAVLEGIRSE----KKRKMEDDTDKPKKKQNRTAKKP-----TMMP-EYRGV 673
Query: 646 DVSDIKGETSIFSDMVFCI 664
++ D++ E ++F D F +
Sbjct: 674 NLKDVEVEDNLFGDFKFVV 692
>gi|407927616|gb|EKG20505.1| DNA ligase ATP-dependent [Macrophomina phaseolina MS6]
Length = 1018
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 202/684 (29%), Positives = 344/684 (50%), Gaps = 66/684 (9%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P +R+ +F+ + V D + A RLI+P DR+R YGLKE + L+ L +
Sbjct: 85 PNEIRRNIIERFISRWRQEVGNDIYPAFRLIVPEKDRDRAMYGLKEKAIGKLLVRVLRID 144
Query: 82 KDSADAVRLINWRKGGAAPN---AGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
KDS D L+NW+ G AG+F +V+ +R G +TI E+N+ LD+L+
Sbjct: 145 KDSEDGFNLLNWKLPGQKATVAMAGDFAGRCFDVVSKRPIRTKPGDMTIGEVNEKLDKLS 204
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
+++ + ++ NA+E+ W+I +IL+ +K+G +E++IF +HPDAE LFNV+
Sbjct: 205 VMSKEEDQLPIFQEFYQRMNAEEIMWLIRVILRQMKVGATERTIFDIWHPDAESLFNVSS 264
Query: 198 DLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQL-AMRIGDAHAAWRKL----HGKEVVIE 250
L+ VC +L D + R D I + + +PQL A ++ +++ E IE
Sbjct: 265 SLRRVCWELYDPSIRLDGDDTGITLMQCFQPQLAAFQMHSFEKMVQRMKPTEEDDEFWIE 324
Query: 251 CKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YG-------HAMSKIIEQNVL-- 293
K DG+R+Q+H G ++SR D++ YG A+++ ++
Sbjct: 325 EKLDGERMQLHMVEDASAPGGKRFGFWSRKAKDYTYLYGSHFEDDNSALTRHLKHAFHEG 384
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYFAFDVLYVGDTSVI 352
V ILDGEM+ WD + FG+ + A ++ S+ ++ Y FD LY+ D +
Sbjct: 385 VRNIILDGEMITWDMEQDAMVPFGTLKTAALSEQKNPFSTGQRPLYKVFDCLYLNDEPLT 444
Query: 353 HQSLKERHELLQKVVKPSKGRLE--TLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
+L++R + L+ V P + R E T P AH DE+E +
Sbjct: 445 QYTLRDRRKALEASVHPIRRRFEIHTYTP-------------------AHTPDEIEPLLR 485
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGE 469
+ EG+V+K+ S + R+ W+K+KPEY+ G +LD ++IGGY+GSG+RGG
Sbjct: 486 NVVAEASEGLVIKNPRSPYRLNQRNDDWIKVKPEYMTEFGEELDCVVIGGYWGSGKRGGN 545
Query: 470 VAQFLVAL-AERPAPD--TYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
++ F+ L ++P D P + SF +VG G++ ++ A+ + ++ + KR P
Sbjct: 546 LSSFMCGLRVDQPQIDRGANPMKCYSFFKVGGGMTAQDYAAIRHQTDSKWQDWNV-KRPP 604
Query: 527 PSFYQVTNNSK-----ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 581
+ ++ N S ERPDVWI+ P S+++S+ + ++ F +LRFPR ++
Sbjct: 605 TEYIELANGSSGDRQYERPDVWIK-PCDSVVMSVKA-ASVGTTDQFRMGLTLRFPRFKKL 662
Query: 582 RYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSH 641
R DK W D L +Q F+ L ++ K KE+ + D + K+ R+S+K
Sbjct: 663 RTDKSWKDALSIQDFLALKQNAE-QKHKEKEF-KVDDARRKRLRTSKKRPMTIAGFEEEA 720
Query: 642 FLQTDVSDIKGETSIFSDMVFCIL 665
+T S + +F+ + F I+
Sbjct: 721 TTRTATSSLSSAPQVFNGLAFSIM 744
>gi|428174096|gb|EKX42994.1| Lig4/DNL4/DNA ligase IV non-homologous end joining DNA repair
[Guillardia theta CCMP2712]
Length = 975
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 206/632 (32%), Positives = 324/632 (51%), Gaps = 92/632 (14%)
Query: 46 FSALRLILPSLDRERG----SYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPN 101
+ +R++LP DRE SY +KE LA I+AL ++K DA RL+ W++ A
Sbjct: 54 YQLIRILLPQFDREEMGANVSYNMKELSLAQRFIEALSLNKKCEDAQRLLGWKQPIAGEG 113
Query: 102 AGNFPMVAAEVLQ-RRQGMISGGLTIKELNDLLDRLASSENRAEKISVL-STLIKKTNAQ 159
GNF +V VL+ R + G +T+ ++N LD+L+ + + +++ ++L + L+ + +A
Sbjct: 114 MGNFSLVLENVLRPRTESNEEGKMTLGDVNAFLDQLSENASNSKRQAILLAELLIRASAY 173
Query: 160 EMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIE 219
E++WI +IL++LK G+SEK + + FHPDA + F + +L+ V K KD R + +I+
Sbjct: 174 EIRWIARVILRELKAGLSEKLVLNAFHPDAMEFFKINTNLREVVNKCKDPKVRLNKINID 233
Query: 220 VGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE 279
+ P LA ++ D A + IE KFDG+RIQIHK + ++R D++E
Sbjct: 234 YFQPFNPMLAEKVTDLQAVPEYFKNRVFWIENKFDGERIQIHKCFDRLSCYTRRGNDYTE 293
Query: 280 YGHAMSKIIEQNVLV--DRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDG------- 329
+ I+ + L+ +RCILDGE++ W+ ++ +FG+N+ IA + DG
Sbjct: 294 LYQPLLDILRREKLIAAERCILDGEVVGWNFDQQKWEKFGTNKSIAMRMGNDGDDWEKPR 353
Query: 330 --LSSD--------RQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVP 379
SSD LC+ FD++ GDT + LKER E L ++++ + +E +
Sbjct: 354 QMSSSDFANSGATKSTLCFVVFDIVCEGDTVMTDWPLKERRERLVEIIREKEKIVEIV-- 411
Query: 380 DHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRS-GKW 438
HV A + EV K +E +E +EGIVLK+ SK+ P R G+W
Sbjct: 412 -----KHVE----------ASDSGEVYKKLEEALETEEEGIVLKNPESKYVPKSREKGEW 456
Query: 439 LKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRR-FISFCRVG 497
+KLKP+Y+ + D+LI+GG YG G+RGG+V QF+ A+A+ P P F + CRVG
Sbjct: 457 MKLKPDYLGGSEEFDLLIVGGTYGKGQRGGQVWQFICAVADEPREKGKPPSCFRTMCRVG 516
Query: 498 TGLSDEELDAVVTKLK----PYFR-----------------------KYEYPKRAPPSFY 530
TG + EE + LK PY R +++ A P
Sbjct: 517 TGKTREEFMQLFNLLKENMRPYKRLTQGKTAVDRDVKFERKQDFTSVQWQQKDGADPVEV 576
Query: 531 QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-----------YSLRFPRID 579
+ N+KE DV + P KS +L++ +D R I S VF A ++LRFPRI
Sbjct: 577 LFSGNAKEEVDV-VFDPRKSRVLTLVADYRLIESNVFMAARGVEGKDDKTGWTLRFPRIR 635
Query: 580 RVRY--------DKPWHDCLDVQSFVELVHSS 603
Y +KPW DC+ + F E + S
Sbjct: 636 EGGYRCGEMGGDEKPWFDCMTSRQFEEAIARS 667
>gi|258567260|ref|XP_002584374.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905820|gb|EEP80221.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1009
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 198/635 (31%), Positives = 328/635 (51%), Gaps = 65/635 (10%)
Query: 20 QKTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDA 77
Q P +R ++F+ + + V D + A RLI+P DR+R YGLKE + L+
Sbjct: 67 QTLSPQELRRDIIQRFISKWRNEVGDDIYPAFRLIIPEKDRDRAMYGLKEKTIGKLLVKI 126
Query: 78 LGMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLL 133
+ + K+S D L+NW+ G A+ AG+F EV+ +R G +T++E+N+ L
Sbjct: 127 MKIDKNSEDGFNLLNWKLPGQSMASRMAGDFAGRCYEVISKRPMRTEVGNMTVQEVNEKL 186
Query: 134 DRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLF 193
D LA++ E++ +L +K N +E+ W+I IIL+ +K+G +E++ F +HPDAE LF
Sbjct: 187 DLLAAANKEDEQLPILEDFYRKMNPEELLWLIRIILRQMKVGATERTFFEIWHPDAETLF 246
Query: 194 NVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVV--- 248
+++ L+ VC +L + N R + ++ + + + +PQLA H+ R + +
Sbjct: 247 SISSSLRRVCWELYNPNVRLEDEETGVTLMQCFQPQLAQ--FQMHSFQRMIEKMRLSPED 304
Query: 249 ----IECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIE 289
IE K DG+R+Q+H G ++SR D++ YG+ A+++ ++
Sbjct: 305 PSFWIEEKMDGERMQLHMMSDDSITGGKRFKFWSRKAKDYTYLYGNGFYDENGALTRHLK 364
Query: 290 QNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYF-AFDVLY 345
V ILDGEM+ WD + FG+ + A R+ S+ Q F AFD+LY
Sbjct: 365 DAFADGVQNIILDGEMITWDPEQDAPVPFGTLKTAALSEQRNPFSATGQRPLFRAFDILY 424
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLN-SHVRPQGEPCWSLVAHNVDE 404
+ D ++ +L++R + L+ +KP R E + G + +H+ PQ
Sbjct: 425 LNDKALTRYTLRDRRKALEASIKPVHRRFEIHTYEVGYSAAHIEPQ-------------- 470
Query: 405 VEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGS 463
++ + EG+VLK+ S + +R W+K+KPEY+ G LD ++IGGYYGS
Sbjct: 471 ----LRKVVAEASEGLVLKNPDSPYRLNERHDDWMKVKPEYMTEFGESLDCVVIGGYYGS 526
Query: 464 GRRGGEVAQFLVALAERPA---PDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
G+RGG +A FL L A P + SFC+VG G + + V ++ ++
Sbjct: 527 GKRGGALATFLCGLRVDEAQIRQGANPMKCYSFCKVGGGFTAADYANVRHHTDSKWKDWD 586
Query: 521 YPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRI 578
PK+ P F ++ ERPDVWI P++S++L + + T S+ F ++RFPR
Sbjct: 587 -PKKPPTEFIELAGGDAQYERPDVWIR-PDESVVLCVKASSVT-PSDQFRLGLTVRFPRF 643
Query: 579 DRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEY 613
R+R DK W L +Q F++L S+ QK KE+
Sbjct: 644 KRLRMDKTWESALSIQEFMDL-KSNAEREQKEKEF 677
>gi|348688552|gb|EGZ28366.1| hypothetical protein PHYSODRAFT_284249 [Phytophthora sojae]
Length = 968
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 219/705 (31%), Positives = 354/705 (50%), Gaps = 81/705 (11%)
Query: 12 LVSLFNWIQKTKPAAKKRSK-FRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVL 70
L S+ ++ T+ KK F K L + D + +RL+LP LDRER +Y LKE +
Sbjct: 14 LCSVLKAVEATRNNDKKLDLLFSKELRSQVGGGDLYPLVRLVLPQLDRER-TYMLKEKKI 72
Query: 71 ANCLIDALGMSKDSADAVRLINWR--KGGAAPNAGNFPMVAAEVLQRRQGMISG--GLTI 126
A + LG+S S DA +L ++ K + + G+F V EV+ R T+
Sbjct: 73 AKIYVQVLGLSPASKDAQKLEHFHDPKIVDSKSVGDFAAVLYEVMLYRSTASKSRQQHTL 132
Query: 127 KELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFH 186
K++N LLD L ++N A + V+ L + +A E KWII ++LKDLK+G+ + + H
Sbjct: 133 KDVNALLDSLVQADNNATRKKVIMKLATEYSADEQKWIIRVVLKDLKIGLRHERVLKFIH 192
Query: 187 PDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRI--GDAHAAWRKLHG 244
PDA +++N T DL VC +L++ R+ Q +E + P LA R+ G+ +A ++
Sbjct: 193 PDAMEMYNHTNDLHKVCRELRNSAVRYVPQ-LEPFQVFTPMLAKRVNFGECISA---INA 248
Query: 245 KEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YG-----HAMSKIIEQNVLVDRCI 298
V+E K DG+RI H G E+ + SR+ ++++E Y H +S+ +E V CI
Sbjct: 249 DAFVMEPKLDGERITCHVQGKEVQFISRNGINYTENYAPSIKPHVLSQ-LEPGV---DCI 304
Query: 299 LDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKE 358
LDGEM+VWD R EFG + A A R G +++R LCY +DV+Y+G + Q ++E
Sbjct: 305 LDGEMMVWDNVGYRLREFGLLKNTANAVRKGEATNRWLCYVVWDVVYLGGSPKAEQLIRE 364
Query: 359 ------------------RHELLQKVVKPSKGRL----ETLVPDHGLNSHVRPQGEPCWS 396
R +LL +++KP R+ + LV D S
Sbjct: 365 VFKGPGEISAVMGLPLHARRKLLLRILKPLDHRIIILEQKLVNDKSAKER--------HS 416
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGD---RSGKWLKLKPEYIRAGSDLD 453
V VD E + N EG+++KDL + + G+ ++ KWLKLKP+Y +DLD
Sbjct: 417 KVMAEVD-------EQVSNGGEGVIMKDLNAHYMCGESSRKTKKWLKLKPDYAGMTTDLD 469
Query: 454 VLIIGGYYGSG-RRGGEVAQFLVAL----------AERPAPDTYPRRFISFCRVGTGLSD 502
+IIGG+YG G RR G V+ FL+ + A+ P +F +VGTG +
Sbjct: 470 AIIIGGFYGVGRRRSGNVSVFLLGVLAHSLDENSAAKATEPGAACPTVYTFAKVGTGYNL 529
Query: 503 EELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTI 562
+EL+ + +L+PY++ ++ P S RPDVWI+ P S IL +
Sbjct: 530 DELEQMRQELEPYWQPWDDDNIPPHLNGWKPQKSDLRPDVWID-PRHSKILEVYG-FELS 587
Query: 563 RSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNG--TTQKGKEYGGLQDDK 620
+ ++S ++RFPR +R DK W+ C+++Q +++ G +T++ E Q
Sbjct: 588 FTTLYSTGLTIRFPRCKAIRNDKEWYQCINLQDL----NAARGSLSTKRASEVALGQKTA 643
Query: 621 PKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ + + + S V + + D+ I+ E ++F FC+L
Sbjct: 644 TGRVKKRQTISSRRPSGVLQGYSRADLEGIEQERNVFEGKEFCVL 688
>gi|154303118|ref|XP_001551967.1| hypothetical protein BC1G_09579 [Botryotinia fuckeliana B05.10]
Length = 1130
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 214/703 (30%), Positives = 355/703 (50%), Gaps = 90/703 (12%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P +R+ +F+ + D V D+F ALRLI+P DR+R YGLKE+ +A +I L +S
Sbjct: 195 PNEIRRNIIIRFMSRWRDQVGDDFFPALRLIIPEKDRDRVMYGLKEASVAKLIIKLLNLS 254
Query: 82 KDSADAVRLINWR---KGGAAPNAGNFPMVAAEVLQRR-QGMISGGLTIKELNDLLDRLA 137
KDS D L+NW+ +G + N+G+FP EVL +R G +TI E+N++LD+LA
Sbjct: 255 KDSDDGYNLMNWKLPARGPPSANSGDFPGRCYEVLSKRPMRQKVGNMTIGEVNEMLDKLA 314
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
S++ ++ + ++ N E+ W+I +IL+ +K+G SEK+ + +HPD E LFNV+
Sbjct: 315 SAQKEDIQLPIFREFYQRMNPTELVWLIRMILRQMKIGASEKTFLNLWHPDGEALFNVSS 374
Query: 198 DLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAW------RKLHGK---- 245
L+ VC +L D + + + +E+G +PQLA + + + GK
Sbjct: 375 SLRRVCWELTDPDVTLEADETGVELGSCFQPQLAQFMAPSFDKMVEKMCPQDTKGKSKEV 434
Query: 246 EVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQ 290
E IE K DG+RIQ+H G ++SR D++ YG+ A+++ +++
Sbjct: 435 EFWIEEKLDGERIQMHMEENDDMPGGRRFTWWSRKGKDYTYLYGNNFEDDNAALTRHMKK 494
Query: 291 --NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYF-AFDVLYV 346
+ V ILDGEM+ WD N+ FG+ + A +D S+ F FD L++
Sbjct: 495 AFDPRVTSIILDGEMITWDPITNKIVAFGTLKTAAISGGKDPFSATATRPVFKVFDCLFL 554
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
++ +L++R L+ V +GR+E +P A + E++
Sbjct: 555 NGDNITKHTLRDRRNALEAAVHNVEGRIE--------KHDFKP---------AKSASEID 597
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGR 465
++ + EG+VLK+ S + R+ W+K+KPEY+ G LD +IIGGYYGSG
Sbjct: 598 PALRKIVAEGSEGLVLKNPQSMYRLNSRNDDWMKVKPEYMTGFGESLDCIIIGGYYGSGH 657
Query: 466 RGGEVAQFLVAL--------AERPAP-------------DTYPRRFISFCRVGTGLSDEE 504
RGG ++ FL L AP P + SF +VG G + ++
Sbjct: 658 RGGNLSSFLCGLRVDEKQIKTGMIAPPFTIGKRKLNHKTGANPMKCFSFFKVGGGFNTDD 717
Query: 505 LDAVVTKLKPYFRKYEYPKRAPPSFYQV--TNNSKERPDVWIESPEKSIILSITSDIRTI 562
+ + + K++ K P F ++ ++ +ERPDVWI++ E SI++ + + I
Sbjct: 718 YATIRHQTDGKWHKWDI-KSPPTEFIELAGSHQERERPDVWIKADE-SIVVEVKAASVGI 775
Query: 563 RSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPK 622
S+ F Y+LRFPR R+R DK W L ++ F+EL ++GKE + DK K
Sbjct: 776 -SDSFRTNYTLRFPRFKRLRPDKDWKSALSIEEFMEL----KAKVEEGKE-DEFRVDKKK 829
Query: 623 QFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
R S++ +++ + +T+ + T +F + FC+L
Sbjct: 830 --RGSKRVKRERIIAGTEDVGKTEYAG--PNTDVFKGLNFCVL 868
>gi|429238722|ref|NP_587888.2| DNA ligase Lig4 [Schizosaccharomyces pombe 972h-]
gi|395398610|sp|O74833.3|DNLI4_SCHPO RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|347834433|emb|CAA21085.3| DNA ligase Lig4 [Schizosaccharomyces pombe]
Length = 913
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 187/577 (32%), Positives = 295/577 (51%), Gaps = 50/577 (8%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAG 103
D + LRL+LP LDRERGSYG KE L I A+ +S S DA L NWR G + + G
Sbjct: 70 DLYPLLRLMLPDLDRERGSYGFKEFGLGKLFIRAMHLSPTSEDAKSLKNWR-GSESKHTG 128
Query: 104 NFPMVAAEVLQRRQ-GMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMK 162
+F + ++LQRR G T+ ++N LLD+LA + + ++++L + + E++
Sbjct: 129 DFSTMLQDILQRRAYRTFPGAFTVGDVNALLDQLADASSEDTRVNILEQFYRSLSPLELR 188
Query: 163 WIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKD--RNQRHKRQDIEV 220
W+I I+LK K G SEK I FHPDA L+ + LK +C +L D R+ D+EV
Sbjct: 189 WLIPILLKVRKYGTSEKFILSVFHPDAARLYRLCSSLKRICWELYDPSRSLDETETDVEV 248
Query: 221 GKAVRPQLA-MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE 279
+PQLA + D H + K IE K DG+RIQ+H + + ++SR+ ++
Sbjct: 249 FSCFQPQLANFKKKDLHQTLEAMGNKPFWIEEKLDGERIQLHMSSGKFQFYSRNARSYT- 307
Query: 280 YGHAMSKIIEQNVL-----------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARD 328
Y + S EQ+ L + + ILDGEM+ WD L +GS + I + +
Sbjct: 308 YAYGSSYFDEQSRLTQYIIGAFDKRISQIILDGEMVTWDPVLETVIPYGSLRSIFEDSSS 367
Query: 329 GLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVR 388
S FD+LY+ S++ SL+ R +L+KV+ R+ +++P
Sbjct: 368 HSSYSPYYV--VFDILYLNGKSLVKYSLESRRRILEKVIVRESHRM-SILPYK------- 417
Query: 389 PQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA 448
V ++++E + I+ EG+V+K + G+R W+K+KP Y++
Sbjct: 418 ---------VGSTIEDIEAELRNVIQEGSEGLVIKKPSGSYHLGERMDDWIKVKPYYLQG 468
Query: 449 -GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA 507
G DLD LI+GGY+G G++ G++ FL L P + +F SF RVG G + + D
Sbjct: 469 FGEDLDCLILGGYFGRGKQSGKINSFLCGLRMDYTPKDHSEKFQSFVRVGGGFTYFDRDI 528
Query: 508 VVTKLKPYFRKY-----EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTI 562
+ + + + + EY + A T E+PD+WI P+ S++L I + +
Sbjct: 529 IRKETEGKWLPWSSDALEYMELAG------TKQDFEKPDMWIH-PKDSLVLQIKA-AEVV 580
Query: 563 RSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
S F Y+LRFPR+++VR D+ W D L + F L
Sbjct: 581 VSNRFKTNYTLRFPRLEKVRLDRSWKDALTINEFFTL 617
>gi|345568495|gb|EGX51389.1| hypothetical protein AOL_s00054g459 [Arthrobotrys oligospora ATCC
24927]
Length = 979
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 201/619 (32%), Positives = 320/619 (51%), Gaps = 61/619 (9%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P K+R +F+ + V D + A RLI+P DRER YGLKE L LI L +S
Sbjct: 79 PQEKRREIITRFIARWRRDVGNDIWPAFRLIMPDKDRERSVYGLKEKALGTVLIKVLRIS 138
Query: 82 KDSADAVRLINWRK---GG--AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDR 135
+DS DA L++W++ GG A AG+FP + +R G LTI ++N+LL+R
Sbjct: 139 RDSDDAYNLLHWKQPRIGGDSKATGAGDFPSRCETAISKRALRTDPGDLTIDDVNELLNR 198
Query: 136 LASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNV 195
LA E+ V+ + NA+E+ W+I IILK +K+G +EK+ +H DA++L+NV
Sbjct: 199 LA--EDSKNHTPVIQEFYNRMNAEELTWLIKIILKQMKVGATEKTFLDCWHQDADELYNV 256
Query: 196 TCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLA-MRIGDAHAAWRKLHGKE----VV 248
+ LKLVC L D R D +++G+ +PQLA ++ +K+ E
Sbjct: 257 SSSLKLVCWDLWDPEFRLDSSDKGVKLGQTFQPQLAQFQLRSFEDVVKKMQPTEDDKVFW 316
Query: 249 IECKFDGDRIQIH-KNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDR----------- 296
IE K DG+R+Q+H + ++SR ++++ H S + ++N + R
Sbjct: 317 IEEKLDGERMQLHLHDDGTFKFYSRKAKEYTD--HYGSSVDDENGTLTRYLKKAFKPGVR 374
Query: 297 -CILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQS 355
ILDGEM+ WD + FG+ + A R S + + FD+LY+ DTS+I +
Sbjct: 375 NIILDGEMVTWDPIEDAMVAFGTLKSAVIAQRTDDPSAHRPFFRVFDILYLNDTSLIKYT 434
Query: 356 LKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN 415
L++R L V+P RLE H +G V++++ +E +
Sbjct: 435 LRDRRNALISAVEPVHRRLEV---------HTYTEGT--------TVEDIKVKLREVVAE 477
Query: 416 RDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIR-AGSDLDVLIIGGYYGSGRRGGEVAQFL 474
EG+V+K+ S + GDR+ WLK+KP+Y++ G + D+L+IGGYYG G RGG ++ F+
Sbjct: 478 ASEGLVIKNPRSMYCLGDRNDDWLKVKPDYVKDLGENFDLLVIGGYYGQGSRGGRLSSFM 537
Query: 475 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFY-QVT 533
L AP+ ++ SF +VG G S ++ + + + + + + R PP+ Y ++
Sbjct: 538 CGLR---APNG---KYYSFTKVGGGFSAQDYNWIRHQTEGKWNTWN--TRKPPAEYIELA 589
Query: 534 NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDV 593
ERPD WI+ PE SI++S+ T S+ F +LRFPR ++R D+ W+ L +
Sbjct: 590 AGQAERPDEWIK-PEDSIVISVKGAAVT-PSDQFKTGLTLRFPRFTKLREDRSWNSALSL 647
Query: 594 QSFVELVHSSNGTTQKGKE 612
F + QK E
Sbjct: 648 NEFFRRKRELDEQQQKENE 666
>gi|347839336|emb|CCD53908.1| similar to DNA ligase [Botryotinia fuckeliana]
Length = 1024
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 214/703 (30%), Positives = 355/703 (50%), Gaps = 90/703 (12%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P +R+ +F+ + D V D+F ALRLI+P DR+R YGLKE+ +A +I L +S
Sbjct: 89 PNEIRRNIIIRFMSRWRDQVGDDFFPALRLIIPEKDRDRVMYGLKEASVAKLIIKLLNLS 148
Query: 82 KDSADAVRLINWR---KGGAAPNAGNFPMVAAEVLQRR-QGMISGGLTIKELNDLLDRLA 137
KDS D L+NW+ +G + N+G+FP EVL +R G +TI E+N++LD+LA
Sbjct: 149 KDSDDGYNLMNWKLPARGPPSANSGDFPGRCYEVLSKRPMRQKVGNMTIGEVNEMLDKLA 208
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
S++ ++ + ++ N E+ W+I +IL+ +K+G SEK+ + +HPD E LFNV+
Sbjct: 209 SAQKEDIQLPIFREFYQRMNPTELVWLIRMILRQMKIGASEKTFLNLWHPDGEALFNVSS 268
Query: 198 DLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAW------RKLHGK---- 245
L+ VC +L D + + + +E+G +PQLA + + + GK
Sbjct: 269 SLRRVCWELTDPDVTLEADETGVELGSCFQPQLAQFMAPSFDKMVEKMCPQDTKGKSKEV 328
Query: 246 EVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQ 290
E IE K DG+RIQ+H G ++SR D++ YG+ A+++ +++
Sbjct: 329 EFWIEEKLDGERIQMHMKENDDMPGGRRFTWWSRKGKDYTYLYGNSFEDDNAALTRHMKK 388
Query: 291 --NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYF-AFDVLYV 346
+ V ILDGEM+ WD N+ FG+ + A +D S+ F FD L++
Sbjct: 389 AFDPRVTSIILDGEMITWDPITNKIVAFGTLKTAAISGGKDPFSATAARPVFKVFDCLFL 448
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
++ +L++R L+ V +GR+E +P A + E++
Sbjct: 449 NGDNITKHTLRDRRNALEAAVHNVEGRIE--------KHDFKP---------AKSASEID 491
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGR 465
++ + EG+VLK+ S + R+ W+K+KPEY+ G LD +IIGGYYGSG
Sbjct: 492 PALRKIVAEGSEGLVLKNPQSMYRLNSRNDDWMKVKPEYMTGFGESLDCIIIGGYYGSGH 551
Query: 466 RGGEVAQFLVALAERP--------AP-------------DTYPRRFISFCRVGTGLSDEE 504
RGG ++ FL L AP P + SF +VG G + ++
Sbjct: 552 RGGNLSSFLCGLRVNEKQIKTGMIAPPFTIGKQNLNHKTGANPMKCFSFFKVGGGFNTDD 611
Query: 505 LDAVVTKLKPYFRKYEYPKRAPPSFYQV--TNNSKERPDVWIESPEKSIILSITSDIRTI 562
+ + + K++ K P F ++ ++ +ERPDVWI++ E SI++ + + I
Sbjct: 612 YATIRHQTDGKWHKWDI-KSPPTEFIELAGSHQERERPDVWIKADE-SIVVEVKAASVGI 669
Query: 563 RSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPK 622
S+ F Y+LRFPR R+R DK W L ++ F+EL ++GKE + DK K
Sbjct: 670 -SDSFRTNYTLRFPRFKRLRPDKDWKSALSIEEFMEL----KAKVEEGKE-DEFRVDKKK 723
Query: 623 QFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
R S++ +++ + +T+ + T +F + FC+L
Sbjct: 724 --RGSKRVKRERIIAGTEDVGKTEYAG--PNTDVFKGLNFCVL 762
>gi|242763732|ref|XP_002340633.1| DNA ligase, putative [Talaromyces stipitatus ATCC 10500]
gi|218723829|gb|EED23246.1| DNA ligase, putative [Talaromyces stipitatus ATCC 10500]
Length = 736
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 204/679 (30%), Positives = 353/679 (51%), Gaps = 68/679 (10%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++R ++F+ + V D + A RLI+P DR+R YGLKE V+ L+ + +
Sbjct: 77 PQERRRDIIQRFISRWRRDVGDDIYPAFRLIVPDKDRDRAMYGLKEKVIGKLLVKIMKID 136
Query: 82 KDSADAVRLINWRKGGAAPN---AGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ G + + AG+F EVL RR G + I+E+N+ LD+L+
Sbjct: 137 KNSEDGFNLLNWKLPGQSASSRMAGDFAGRCYEVLSRRPMRTDVGDMRIEEVNERLDQLS 196
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
S+ +++ +L+ ++ N +E+ W+I IIL+ +K+G +E++ F +HPDAE LF+++
Sbjct: 197 SASKEDQQLPILAEFYRRMNPEELMWLIRIILRQMKVGATERTFFDVWHPDAERLFSISS 256
Query: 198 DLKLVCEKLKDRNQRHK--RQDIEVGKAVRPQLA-MRIGDAHAAWRKLHGKE----VVIE 250
L+ VC +L D N R + + + + + +PQLA ++ +++ G E IE
Sbjct: 257 SLRRVCWELHDPNIRLEGDERGVSLMQCFQPQLAQFQMHSFDKMVQRMRGTEEDPTFWIE 316
Query: 251 CKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNVL-- 293
K DG+R+Q+H + G ++SR D++ YG+ ++++ ++ +
Sbjct: 317 EKLDGERMQLHMETDDSVEGGKRFCFWSRKAKDYTYLYGNGFYDRNGSLTRHLKDAFVDG 376
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYFAFDVLYVGDTSVI 352
VD ILDGEM+ WD + FG+ + A A RD + + FD+LY+ D +
Sbjct: 377 VDNIILDGEMITWDPEQDAPVPFGTLKSAALAEQRDPNAKGPRPLLRVFDILYLNDRELT 436
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
+L++R + ++K ++P R E + P E A E+E ++
Sbjct: 437 LYTLRDRRQAIEKAIRPVHRRFE-----------IHPYTE------ATTAAEIEPILRKV 479
Query: 413 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVA 471
+E EG+VLK+ S + +R W+K+KPEY+ G LD++IIGGYYGSG+RGG ++
Sbjct: 480 VEEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGEALDLVIIGGYYGSGKRGGALS 539
Query: 472 QFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV----TKLKPYFRKYEYPKRAPP 527
+L L + + SFC+VG G + + + K KP+ PK+ P
Sbjct: 540 SYLCGLRVDDPNGSNSMKCYSFCKVGGGFTAADYANIRHHTDGKWKPW-----NPKKPPT 594
Query: 528 SFYQVTN---NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYD 584
F ++ + KE+PD WI P++S+++ + + ++ SE F +LRFPR ++R D
Sbjct: 595 EFIELAGGEASQKEKPDEWIR-PDESVVICVKAASVSV-SEEFRIGLTLRFPRFKKLRMD 652
Query: 585 KPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQ 644
K W L VQ F++L S+ QK K++ + + + K+ ++S KK ++I
Sbjct: 653 KDWKSALSVQEFLDL-KSNVEKEQKEKQF-TVDNSRRKRIKTS---TKKPLTIAGYDEKD 707
Query: 645 TDVSDIKGETSIFSDMVFC 663
V +IF + FC
Sbjct: 708 KRVEYAGPTGNIFDGLDFC 726
>gi|242763727|ref|XP_002340632.1| DNA ligase, putative [Talaromyces stipitatus ATCC 10500]
gi|218723828|gb|EED23245.1| DNA ligase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1014
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 197/645 (30%), Positives = 342/645 (53%), Gaps = 65/645 (10%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++R ++F+ + V D + A RLI+P DR+R YGLKE V+ L+ + +
Sbjct: 77 PQERRRDIIQRFISRWRRDVGDDIYPAFRLIVPDKDRDRAMYGLKEKVIGKLLVKIMKID 136
Query: 82 KDSADAVRLINWRKGGAAPN---AGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ G + + AG+F EVL RR G + I+E+N+ LD+L+
Sbjct: 137 KNSEDGFNLLNWKLPGQSASSRMAGDFAGRCYEVLSRRPMRTDVGDMRIEEVNERLDQLS 196
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
S+ +++ +L+ ++ N +E+ W+I IIL+ +K+G +E++ F +HPDAE LF+++
Sbjct: 197 SASKEDQQLPILAEFYRRMNPEELMWLIRIILRQMKVGATERTFFDVWHPDAERLFSISS 256
Query: 198 DLKLVCEKLKDRNQRHK--RQDIEVGKAVRPQLA-MRIGDAHAAWRKLHGKE----VVIE 250
L+ VC +L D N R + + + + + +PQLA ++ +++ G E IE
Sbjct: 257 SLRRVCWELHDPNIRLEGDERGVSLMQCFQPQLAQFQMHSFDKMVQRMRGTEEDPTFWIE 316
Query: 251 CKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNVL-- 293
K DG+R+Q+H + G ++SR D++ YG+ ++++ ++ +
Sbjct: 317 EKLDGERMQLHMETDDSVEGGKRFCFWSRKAKDYTYLYGNGFYDRNGSLTRHLKDAFVDG 376
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYFAFDVLYVGDTSVI 352
VD ILDGEM+ WD + FG+ + A A RD + + FD+LY+ D +
Sbjct: 377 VDNIILDGEMITWDPEQDAPVPFGTLKSAALAEQRDPNAKGPRPLLRVFDILYLNDRELT 436
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
+L++R + ++K ++P R E + P E A E+E ++
Sbjct: 437 LYTLRDRRQAIEKAIRPVHRRFE-----------IHPYTE------ATTAAEIEPILRKV 479
Query: 413 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVA 471
+E EG+VLK+ S + +R W+K+KPEY+ G LD++IIGGYYGSG+RGG ++
Sbjct: 480 VEEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGEALDLVIIGGYYGSGKRGGALS 539
Query: 472 QFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV----TKLKPYFRKYEYPKRAPP 527
+L L + + SFC+VG G + + + K KP+ PK+ P
Sbjct: 540 SYLCGLRVDDPNGSNSMKCYSFCKVGGGFTAADYANIRHHTDGKWKPW-----NPKKPPT 594
Query: 528 SFYQVTN---NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYD 584
F ++ + KE+PD WI P++S+++ + + ++ SE F +LRFPR ++R D
Sbjct: 595 EFIELAGGEASQKEKPDEWIR-PDESVVICVKAASVSV-SEEFRIGLTLRFPRFKKLRMD 652
Query: 585 KPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 629
K W L VQ F++L S+ QK K++ + + + K+ ++S K
Sbjct: 653 KDWKSALSVQEFLDL-KSNVEKEQKEKQF-TVDNSRRKRIKTSTK 695
>gi|367027680|ref|XP_003663124.1| hypothetical protein MYCTH_2304601 [Myceliophthora thermophila ATCC
42464]
gi|347010393|gb|AEO57879.1| hypothetical protein MYCTH_2304601 [Myceliophthora thermophila ATCC
42464]
Length = 1025
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 211/703 (30%), Positives = 354/703 (50%), Gaps = 95/703 (13%)
Query: 27 KKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
++R +F+ + V D++ A+RLILP DR+RG YGLKE+ + L+ + + ++S
Sbjct: 98 QRRHIVERFMSRWRAEVGPDFYPAMRLILPDKDRDRGVYGLKENTIGKLLVKVMKIDRNS 157
Query: 85 ADAVRLINWR----------------KGGAAPNAGNFPMVAAEVLQRRQGMIS--GGLTI 126
D L++W+ GGA AG+F E++++RQ M S G TI
Sbjct: 158 EDGYALMHWKLPGGHGGGGGGGGGRFGGGAISTAGDFAGRCYEIVKKRQ-MRSEPGEFTI 216
Query: 127 KELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFH 186
++N +LDRLA++ AE++ + + NA+E+ W++ IILKD+K+G +E++ +H
Sbjct: 217 GDVNVMLDRLAAASGEAEQLPIFEEFYQGMNAEELMWLVRIILKDMKVGATERTFLGLWH 276
Query: 187 PDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAWRKL-- 242
PDAE LF+V+ L+ VC +L D R ++Q+ + + +PQLA + KL
Sbjct: 277 PDAEALFSVSSSLRRVCWELYDPEFRLEQQETGVTLMSCFQPQLAQF--QMTTTFAKLVA 334
Query: 243 ------HGKEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGHAMSKII 288
E IE K DG+R+Q+H G ++SR D++ YG S +
Sbjct: 335 NLGVTDENPEFWIEEKLDGERMQMHMREDDSVPGGYRFAFWSRKAKDYTYLYG---SGLE 391
Query: 289 EQNVLVDR------------CILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQ 335
+ N + R ILDGEM+ WD +++ FG+ + A ++ S +
Sbjct: 392 DNNSALTRHLKGAFDSGVRNLILDGEMITWDPEVDKIVPFGTLKTAALDQQKNPFHSGPR 451
Query: 336 LCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW 395
Y FD+L + D S+ +L +RH L++ VK + RLE + P
Sbjct: 452 PLYRVFDILLLNDKSLTEYTLADRHRALERAVKGAPRRLE-----------IHPY----- 495
Query: 396 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDV 454
+ A + DE+E + + EG+VLK+ S+++ R+ W+K+KPEY+ G LD+
Sbjct: 496 -VSATSADEIEPLLRAVVAEASEGLVLKNPRSRYQLNSRNNDWIKVKPEYMSEYGESLDL 554
Query: 455 LIIGGYYGSGRRGGEVAQFLVALA-----ERPAPDTYPRRFISFCRVGTGLSDEELDAVV 509
+++GGY+GSGRRGG ++ FL L R + +SFC+VG G E+ +
Sbjct: 555 VVVGGYWGSGRRGGTLSSFLCGLRVSENFVRSGAAASREKCLSFCKVGGGFKAEDYAEMR 614
Query: 510 TKLKPYFRKYEYPKRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEV 566
+ +R+++ P P F ++ + ERPDVWI P +S+++S+ + S+
Sbjct: 615 HHTEGKWREWD-PASPPSEFVELGGGERLQYERPDVWIR-PSESVVISVKA-ASFAPSDQ 671
Query: 567 FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRS 626
F+ ++LRFPR ++R DK W +DV EL + Q+ KE ++ + K R
Sbjct: 672 FATGWTLRFPRFRKLRLDKAWDAGMDVD---ELEALRSKVKQEEKERKAMEMENRK--RK 726
Query: 627 SRKGEKKNVSIVPSHFLQTDVSDI----KGETSIFSDMVFCIL 665
K +K+ + I + L +D K +T +F + FC+L
Sbjct: 727 PAKRQKRELVIAGAADLAGATADFLAVKKPKTDLFRGLDFCVL 769
>gi|389630310|ref|XP_003712808.1| DNA ligase 4 [Magnaporthe oryzae 70-15]
gi|215848864|dbj|BAH01725.1| putative DNA ligase 4 [Magnaporthe grisea]
gi|351645140|gb|EHA53001.1| DNA ligase 4 [Magnaporthe oryzae 70-15]
Length = 1001
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 221/695 (31%), Positives = 356/695 (51%), Gaps = 76/695 (10%)
Query: 21 KTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDAL 78
+ P ++R R+F+D + V D++ ALRLILP DR+RG YGLKES + L+ +
Sbjct: 79 RLSPHEQRRLIIRRFIDRWRSEVGNDFYPALRLILPDKDRDRGVYGLKESAIGKLLVKLI 138
Query: 79 GMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQG-MISGGLTIKELNDLLD 134
++ DS D L+ W+ G A+ AG+F E L +RQ M G + I E+N LLD
Sbjct: 139 KIAPDSEDGQNLLKWKLPGQTFASRMAGDFAGRCFETLSKRQMRMTPGDMRIGEVNSLLD 198
Query: 135 RLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFN 194
+LA++ AE++ + T ++ NA+EM W+I +ILK +K+G SE++ +++HPDAE LFN
Sbjct: 199 KLAAASGEAEQLPIFQTFYERMNAEEMMWLIRMILKAMKIGASERTFLYQWHPDAEALFN 258
Query: 195 VTCDLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLAMRIGDAHAAWRKLHGKEVV---- 248
V+ L+ VC +L D R +++D V + +PQLA + + V
Sbjct: 259 VSSSLRRVCWELYDPALRLEQEDTRVTLMQCFQPQLAQFQPHSPNFATMVQDLGVTDEDR 318
Query: 249 ---IECKFDGDRIQI-------HKNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQ 290
IE K DG+R+Q+ H G ++SR D++ YG+ A+++ +
Sbjct: 319 RFWIEEKLDGERMQLHMIDDDDHPGGKRFSFWSRKGKDYTYLYGNGFQDDNSALTRHLSD 378
Query: 291 --NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD--RQLCYFAFDVLYV 346
+ V ILDGEM+ WD +++ FG+ + A + D + + FD+LY+
Sbjct: 379 AFDPRVSNLILDGEMVTWDPKIDKMVPFGTLKTAALLGQKTPFDDTNERPLFRIFDILYL 438
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
DT++ SL++R + L +VV+ RLE + P E A + D VE
Sbjct: 439 NDTALTKNSLQDRRKALAQVVRDVHRRLE-----------IHPYEE------ATSADAVE 481
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGR 465
++ + + EG+VLK+ S + R+ W+K+KPEY+ G LD ++IGGYYGSG
Sbjct: 482 PLLRKVVADSSEGLVLKNPRSVYRLNSRNNDWIKVKPEYMSEFGESLDCVVIGGYYGSGH 541
Query: 466 RGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
RGG ++ FL L P + ISF +VG G E+ + + + ++ P
Sbjct: 542 RGGTISSFLCGLRVGENHIKAGANPEKCISFFKVGGGFKAEDYAQIRHLTEGKWMDWD-P 600
Query: 523 KRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 579
K+ P F ++ K ERPDVWI P+ SI++S+ + S F+ +LRFPR
Sbjct: 601 KKPPSEFIELGGGEKYQYERPDVWIR-PKDSIVVSVKA-ASIGASPQFAMQITLRFPRFR 658
Query: 580 RVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVP 639
R+R D+ W LDV F++L + ++ KE ++D K R +K ++ + ++
Sbjct: 659 RLRTDRTWDSALDVDDFMKLKEDAEQQVKEKKEM-KIEDRK----RRPQKRARREI-LIA 712
Query: 640 SHFLQTDVSDIK--------GET-SIFSDMVFCIL 665
T ++D K G T S+F FC++
Sbjct: 713 GQDPDTAMADQKPAAGQAQTGRTRSVFEGRKFCVM 747
>gi|440466097|gb|ELQ35383.1| DNA ligase 4 [Magnaporthe oryzae Y34]
gi|440482713|gb|ELQ63180.1| DNA ligase 4 [Magnaporthe oryzae P131]
Length = 1135
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 221/695 (31%), Positives = 356/695 (51%), Gaps = 76/695 (10%)
Query: 21 KTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDAL 78
+ P ++R R+F+D + V D++ ALRLILP DR+RG YGLKES + L+ +
Sbjct: 79 RLSPHEQRRLIIRRFIDRWRSEVGNDFYPALRLILPDKDRDRGVYGLKESAIGKLLVKLI 138
Query: 79 GMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQG-MISGGLTIKELNDLLD 134
++ DS D L+ W+ G A+ AG+F E L +RQ M G + I E+N LLD
Sbjct: 139 KIAPDSEDGQNLLKWKLPGQTFASRMAGDFAGRCFETLSKRQMRMTPGDMRIGEVNSLLD 198
Query: 135 RLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFN 194
+LA++ AE++ + T ++ NA+EM W+I +ILK +K+G SE++ +++HPDAE LFN
Sbjct: 199 KLAAASGEAEQLPIFQTFYERMNAEEMMWLIRMILKAMKIGASERTFLYQWHPDAEALFN 258
Query: 195 VTCDLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLAMRIGDAHAAWRKLHGKEVV---- 248
V+ L+ VC +L D R +++D V + +PQLA + + V
Sbjct: 259 VSSSLRRVCWELYDPALRLEQEDTRVTLMQCFQPQLAQFQPHSPNFATMVQDLGVTDEDR 318
Query: 249 ---IECKFDGDRIQI-------HKNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQ 290
IE K DG+R+Q+ H G ++SR D++ YG+ A+++ +
Sbjct: 319 RFWIEEKLDGERMQLHMIDDDDHPGGKRFSFWSRKGKDYTYLYGNGFQDDNSALTRHLSD 378
Query: 291 --NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD--RQLCYFAFDVLYV 346
+ V ILDGEM+ WD +++ FG+ + A + D + + FD+LY+
Sbjct: 379 AFDPRVSNLILDGEMVTWDPKIDKMVPFGTLKTAALLGQKTPFDDTNERPLFRIFDILYL 438
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
DT++ SL++R + L +VV+ RLE + P E A + D VE
Sbjct: 439 NDTALTKNSLQDRRKALAQVVRDVHRRLE-----------IHPYEE------ATSADAVE 481
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGR 465
++ + + EG+VLK+ S + R+ W+K+KPEY+ G LD ++IGGYYGSG
Sbjct: 482 PLLRKVVADSSEGLVLKNPRSVYRLNSRNNDWIKVKPEYMSEFGESLDCVVIGGYYGSGH 541
Query: 466 RGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
RGG ++ FL L P + ISF +VG G E+ + + + ++ P
Sbjct: 542 RGGTISSFLCGLRVGENHIKAGANPEKCISFFKVGGGFKAEDYAQIRHLTEGKWMDWD-P 600
Query: 523 KRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 579
K+ P F ++ K ERPDVWI P+ SI++S+ + S F+ +LRFPR
Sbjct: 601 KKPPSEFIELGGGEKYQYERPDVWIR-PKDSIVVSVKA-ASIGASPQFAMQITLRFPRFR 658
Query: 580 RVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVP 639
R+R D+ W LDV F++L + ++ KE ++D K R +K ++ + ++
Sbjct: 659 RLRTDRTWDSALDVDDFMKLKEDAEQQVKEKKEM-KIEDRK----RRPQKRARREI-LIA 712
Query: 640 SHFLQTDVSDIK--------GET-SIFSDMVFCIL 665
T ++D K G T S+F FC++
Sbjct: 713 GQDPDTAMADQKPAAGQAQTGRTRSVFEGRKFCVM 747
>gi|145541123|ref|XP_001456250.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424061|emb|CAK88853.1| unnamed protein product [Paramecium tetraurelia]
Length = 739
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 193/597 (32%), Positives = 309/597 (51%), Gaps = 53/597 (8%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNA--- 102
+ +RLI+P DR+RG Y L+E LA ALG+S D D R+ N+++ P
Sbjct: 104 YIIMRLIIPFQDRDRGVYKLQEKNLAKLFRLALGLSDD--DYHRMANYKQASMQPYGAPV 161
Query: 103 GNFPMVAAEVLQ---RRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQ 159
G+FPMV V++ R+ +I TI E++ LLD L +++ E+ V+ LIK A
Sbjct: 162 GDFPMVVHNVIKDYCRKDSII----TISEVDQLLDNLVKAQDTKEQELVIVDLIKVCTAD 217
Query: 160 EMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIE 219
E+ WII IILKDLK+G+ + + FH DA + +N T LK VC++ D N K +
Sbjct: 218 EILWIIRIILKDLKIGLKYEKLLQLFHKDAPEYYNATSSLKEVCKEFVDINHTLKNV-LR 276
Query: 220 VGKAVRPQLAMRIGDAHAAWRKL-HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS 278
+ A++P LA + + RKL GKE+++E KFDG+RIQ H I +F+R+ D++
Sbjct: 277 IFHAIKPMLAAK--KSPEEIRKLIEGKELLVETKFDGERIQCHFTPEVIRFFTRNSNDYT 334
Query: 279 E-YGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLC 337
Y + I+ Q+V ILDGE++V + FG N+ +A ++D LC
Sbjct: 335 YLYKDKLGDIVRQSVQAQCAILDGEIIVVNKETGDNVRFGLNKTVA-LSKDVNDDAFGLC 393
Query: 338 YFAFDVLYVG-----DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGE 392
Y FD+LY+ + + + L R LLQ+++ P +LE +
Sbjct: 394 YKIFDILYLKTYQGQEVNTMSAPLSTRRSLLQRIIVPIPNQLEVV--------------- 438
Query: 393 PCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD- 451
+ + +E+ + F IE EGI++K + S++ P +RS KW+K+K +Y+ +D
Sbjct: 439 --QAATIKSFEELIQQFDMAIERNQEGIIIKQMDSQYLPNERSTKWVKMKGDYVENMTDN 496
Query: 452 LDVLIIGGYYGSGRRGGE-------VAQFLVALAERPAPDTYPRRFI-SFCRVGTGLSDE 503
D+L+IGGY+G+ E + FL+ LA++ + I F +VGTG +D
Sbjct: 497 CDLLVIGGYFGTQSHRVETFDEFDRITHFLMGLAQKIDKNQPTNSVILPFVKVGTGFTDN 556
Query: 504 ELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIR 563
EL + KL+ ++ K + P P ++ N +RPDV+I +P SII + + +
Sbjct: 557 ELSTIRNKLRNHWIKKQKPNYIPQNWNPGVN---DRPDVYINNPAHSIIFEVKA-AEITK 612
Query: 564 SEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDK 620
S F Y+LRFPR + R DK W++ + Q +++ S T K+ +DK
Sbjct: 613 SNTFPTDYTLRFPRCYKTRMDKDWYEMMTTQDLSSMINDSQYTKNLKKKNDKEGNDK 669
>gi|409081487|gb|EKM81846.1| hypothetical protein AGABI1DRAFT_70360 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1918
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 210/688 (30%), Positives = 354/688 (51%), Gaps = 81/688 (11%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCD------SVDYFSALRLILPSLDRERGSYG 64
VL LF + +K+ + +K LD + D + LRL+LP DRER YG
Sbjct: 34 VLAGLFEKLS----TERKQDRRKKLLDAWFTHWRREKGYDLYPVLRLLLPQKDRERAVYG 89
Query: 65 LKESVLANCLIDALGMSKDSADAVRLINWRKGGA-APNAGNFPMVAAEVLQRRQGMISGG 123
LKE LA I + + DA+R++NW++ ++G+FP V EV+ +R +I G
Sbjct: 90 LKEKNLAKTYIKLIPLGMRDPDAIRMLNWKRPTEREKSSGDFPAVLYEVISKRSSVIEGS 149
Query: 124 LTIKELNDLLDRLASSENRAEKIS-VLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
L++ ELN++LD LA + + + S +L + K+ A+E +WII IILKD+++ + E ++F
Sbjct: 150 LSVDELNNILDELAQNMGKQDVQSKILQRIYNKSTAEEQRWIIRIILKDMQISVKETTVF 209
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMR-IGDAHAAW 239
FHPDA+DL+N DLK V +L D + R QD +++ P L+ R
Sbjct: 210 SVFHPDAQDLYNTCSDLKRVACELWDPSFRLNVQDKMVQLFHTFAPMLSKRPTRKLEDTV 269
Query: 240 RKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKIIEQ--N 291
R++ G E +IE K DG+R+Q+HK G+E +Y SR D++ YG +++ I++ +
Sbjct: 270 REMGGLEFIIEEKLDGERMQLHKRGNEYYYSSRKGKDYTYLYGKHVGTGSLTPHIDKAFD 329
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD--RQLCYFAFDVLYVGDT 349
VD ILDGEMLVWD R FG+ + AA D +D + C+ FD+LY+
Sbjct: 330 SRVDDIILDGEMLVWDPVTERNLPFGT---LKTAALDKTQADINPRPCFKVFDLLYLNGQ 386
Query: 350 SVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFF 409
S+IH+ L R L+ + KGR+E + G + ++ +
Sbjct: 387 SLIHKPLTFRKRNLKHCITQVKGRIECVAEFKGTTAK-----------------DIRERM 429
Query: 410 KETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGG 468
+E + R EG+++K SK+ R W+K+KPEY+ G +D+L++ G YG+G+RGG
Sbjct: 430 EEVMAARGEGLIIKHPLSKYTLNGRIMDWIKVKPEYMDNMGETVDLLVVAGNYGTGKRGG 489
Query: 469 EVAQFLVALAERPA--PDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
V+ + A+ E D ++ +F R+G+GLS D V + KP+ + ++
Sbjct: 490 GVSTLICAVFEDRGIDEDDDEPKYSTFVRIGSGLS--YADYVWIRAKPW---KVWNEQQN 544
Query: 527 PSFYQVTNNSKE-RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
PSF +S E + D+++E PE S I+ I + + S+ + +++RFPR +R D
Sbjct: 545 PSFLLTEKHSHEDKGDLFLE-PEDSFIVKIKA-AEIVPSDQYYMGFTMRFPRAMSIRDDL 602
Query: 586 PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKG--------EKKNVSI 637
DC+ + +E G++ ++ ++ S G ++K +I
Sbjct: 603 TIADCMTASAVLE----------------GMKTERKRKMESDITGLHPKRSAKKRKKATI 646
Query: 638 VPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+P + ++ ++ E++IF M F ++
Sbjct: 647 IP-QYQGPNLKNVSIESNIFDGMKFVVM 673
>gi|337743285|gb|AEI73139.1| DNA ligase 4 [Kryptolebias marmoratus]
Length = 469
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 180/493 (36%), Positives = 279/493 (56%), Gaps = 45/493 (9%)
Query: 80 MSKDSADAVRLINWRKGGAAPN-AGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLAS 138
+ K+ +A RL+N+R + AG+F +A VL++R GGL++KE+ND LD +A
Sbjct: 1 LPKNGPEAGRLLNYRAPTTSQGEAGDFASMAYFVLKKRCSS-QGGLSVKEVNDFLDSVAI 59
Query: 139 SENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNV 195
+ +K V L LI +++A E KW+I +ILKD+KLGIS++++ FHPDA DL+NV
Sbjct: 60 NNANKQKDQVKKSLLHLITQSSALEQKWLIRMILKDMKLGISKETVLQVFHPDAADLYNV 119
Query: 196 TCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDG 255
DLK VC++L + IE+ A +P LA + D +++ G +E K DG
Sbjct: 120 NTDLKKVCQQLHSPSVSLSEVSIELFSAFKPMLAA-VADIRGVEKQMGGGAFYVETKLDG 178
Query: 256 DRIQIHKNGSEIHYFSRSFLDHS-EYGHA---------MSKIIEQNVLVDRCILDGEMLV 305
+RIQ+HK+G YFSR+ +++ ++G + + + +V+ CILDGEM+
Sbjct: 179 ERIQLHKDGDVYKYFSRNAFEYTQQFGSSPREGSLTPHVHGAFKGHVV--SCILDGEMMA 236
Query: 306 WDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQK 365
+D + F + GS +I + D S+ Q C+ FDVL V + + + LK+R+E LQ
Sbjct: 237 YDPAAETFMQKGSKFDIKRLMDD---SELQTCFCVFDVLLVNNQKLGKEPLKKRYETLQT 293
Query: 366 VVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL 425
V P KGRL H+ P+ E + +V + I+NR+EGI++KD
Sbjct: 294 VFSPVKGRL-----------HLVPKTE------VRTMQQVVGALNDAIDNREEGIMVKDP 336
Query: 426 GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPD 484
S ++P R WLK+KPEY+ D LD+LI+GGY+G GRRGG ++ FL A+AE P P
Sbjct: 337 LSLYKPDKRGEGWLKIKPEYVDGLMDELDLLIVGGYWGKGRRGGMMSHFLCAVAEAPKPG 396
Query: 485 TYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWI 544
P F S CR+G+G + +EL + KL +++ Y K PP+ E+P+V+I
Sbjct: 397 EKPSVFHSLCRIGSGYTMKELYDLGLKLAKHWKVYR--KNDPPASILC---GTEKPEVYI 451
Query: 545 ESPEKSIILSITS 557
E P S+I+ + +
Sbjct: 452 E-PSDSVIIQVKA 463
>gi|393221932|gb|EJD07416.1| DNA ligase 4 [Fomitiporia mediterranea MF3/22]
Length = 1029
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 199/607 (32%), Positives = 310/607 (51%), Gaps = 44/607 (7%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKES 68
+L LF+ + + +R + + + + D + LRLILP DRER YGLKE
Sbjct: 47 ILAELFDNLANERRQDLRRKRLANWFNGWRRDAGKDLYPVLRLILPQKDRERSVYGLKEK 106
Query: 69 VLANCLIDALGMSKDSADAVRLINWRKGGAA-PNAGNFPMVAAEVLQRRQGMISGGLTIK 127
LA I + + DAVRL+NW++ +G+FP V EV+ +R + G LT+
Sbjct: 107 NLAKTYIKLIPLGMKDPDAVRLLNWKRPTERDKTSGDFPTVLYEVVSKRSSVTQGSLTVD 166
Query: 128 ELNDLLDRLASSENRAEKIS-VLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFH 186
++ND+LD+L+ S + + S +L + +E +W+ IILKD+++ + E ++F FH
Sbjct: 167 QVNDILDQLSQSIGKQDLQSKLLQRIYNSCTPEEQRWVARIILKDMQINVKETTVFAVFH 226
Query: 187 PDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLAMRI-GDAHAAWRKLH 243
PDA DLFN DLK V +L D +R D +V +A P L R + + +
Sbjct: 227 PDAVDLFNACSDLKKVAHELWDPERRLNDSDKQVNLFRAFAPMLCKRPSAKLEDSIKDMQ 286
Query: 244 GKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDH-------SEYGHAMSKIIEQ-NVLVD 295
G+ +IE K DG+R+Q+HK G+E Y SR D+ SE G I + VD
Sbjct: 287 GQPFIIEEKLDGERMQLHKRGNEFFYCSRKGKDYTYLYGANSESGSLTPYIWNAFDERVD 346
Query: 296 RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQS 355
ILDGEMLVWD R FG+ + A +++ R C+ FD+LY+ + +S
Sbjct: 347 EIILDGEMLVWDPVSGRNLPFGTLKTAALDKSKTMANPRP-CFKVFDLLYLNGMCLTKRS 405
Query: 356 LKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN 415
+K R L+ VK KGRLE + G + +V K +E + N
Sbjct: 406 VKFRKRNLKAYVKEVKGRLEYVTEYEG-----------------RSASDVRKRLEEIMAN 448
Query: 416 RDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFL 474
R EG+++K S++ R+ W+K+KPEY+ G +D+L++GG YG+G R G V+ +
Sbjct: 449 RGEGLIIKHPNSEYILNGRNKDWVKVKPEYMDNMGETVDLLVVGGNYGTGYRSGGVSTLI 508
Query: 475 VALAE--RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV 532
A+ + R A D ++ SF R+GTGLS D V + K + + K PS+YQ
Sbjct: 509 CAVLDDRRTASDDDEPKYSSFVRIGTGLS--YADYVWIRQKNW---KPFDKNKMPSWYQA 563
Query: 533 TNNS-KERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCL 591
+ ++ D++IE PE S IL I + S+ + +++RFPR +R D DC+
Sbjct: 564 SKKGYDDKGDIYIE-PEDSFILKIKA-AEITPSDQYHLGFTMRFPRAVAIRDDLSIADCM 621
Query: 592 DVQSFVE 598
+ +E
Sbjct: 622 SATAVLE 628
>gi|336366657|gb|EGN95003.1| hypothetical protein SERLA73DRAFT_170894 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379344|gb|EGO20499.1| hypothetical protein SERLADRAFT_452596 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1011
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 196/609 (32%), Positives = 326/609 (53%), Gaps = 48/609 (7%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKES 68
VL LF + + ++R + + + + + D + LRLILP DRER YGLKE
Sbjct: 42 VLAGLFERLSTERKPERRRKLLDAWFNHWREEIGHDLYPVLRLILPQKDRERAVYGLKEK 101
Query: 69 VLANCLIDALGMSKDSADAVRLINWRKGGAA-PNAGNFPMVAAEVLQRRQGMISGGLTIK 127
LA I + + DA+RL+NW+K ++G+FP V EV+ +R +I G L+I
Sbjct: 102 NLAKTYIKLIPLGMRDPDAIRLLNWKKPTEKDKSSGDFPNVLYEVVNKRSSVIEGSLSIT 161
Query: 128 ELNDLLDRLASSENRAEKIS-VLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFH 186
+LN++LD L+ + + + S +L + + +E +WI+ IILKD+ + + E ++F H
Sbjct: 162 DLNEILDELSKNLGKQDIQSKILQRVYNRATPEEQRWIVRIILKDMVISVKETTVFGVLH 221
Query: 187 PDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMR-IGDAHAAWRKLH 243
PDA+DLFN DLK V +L D ++R K +D I++ +A P L R + +++
Sbjct: 222 PDAQDLFNTCSDLKKVAWELWDPSRRLKAEDKTIQLFRAFAPMLCKRPTRKIEESVKEMQ 281
Query: 244 GKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKIIEQ--NVLVD 295
G++ +IE K DG+RIQ+HK G+E Y SR D++ YG+ +++ I + ++
Sbjct: 282 GRKFIIEEKLDGERIQLHKRGNEYFYCSRKGKDYTYLYGNHVGTGSLTPFIASAFDDRIE 341
Query: 296 RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR--QLCYFAFDVLYVGDTSVIH 353
ILDGEMLVWD R FG+ + AA D + + C+ FD+L++ S++
Sbjct: 342 DIILDGEMLVWDPVSERNLPFGT---LKTAALDKTKREHNPRPCFKVFDLLHLNGMSLLQ 398
Query: 354 QSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETI 413
+SLK R L+ +K GR+E V G + +V + E +
Sbjct: 399 KSLKFRKRNLRACIKEIPGRIELAVEFEGKTAK-----------------DVREKMDEVM 441
Query: 414 ENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQ 472
R EG+V+K S++ R+ W+K+KPEY+ G +DVL++GG YGSG+R G V+
Sbjct: 442 AARGEGLVIKHPDSEYVLNGRNKDWIKVKPEYMDNMGETVDVLVVGGNYGSGKRSGGVST 501
Query: 473 FLVALAE--RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFY 530
+ A+ + + D ++ SF R+G+GL+ D + + KP+ + +PP+F
Sbjct: 502 LICAVLDDRHSSNDDEELKYSSFVRIGSGLT--FADYIWVRQKPW---KLWDPNSPPTFL 556
Query: 531 QVTNNSK-ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHD 589
Q S+ ++ DV++E PE S +L + + TI S+ + +++RFPR +R D D
Sbjct: 557 QTAKRSQDDKGDVYLE-PEDSFMLKVKAAEITI-SDQYHLGFTMRFPRALSIRDDLSIAD 614
Query: 590 CLDVQSFVE 598
C+ + +E
Sbjct: 615 CMTATAILE 623
>gi|67515631|ref|XP_657701.1| hypothetical protein AN0097.2 [Aspergillus nidulans FGSC A4]
gi|74599223|sp|Q5BH83.1|DNLI4_EMENI RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|40746119|gb|EAA65275.1| hypothetical protein AN0097.2 [Aspergillus nidulans FGSC A4]
gi|259489711|tpe|CBF90206.1| TPA: DNA ligase 4 (EC 6.5.1.1)(DNA ligase
IV)(Polydeoxyribonucleotide synthase [ATP] 4)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BH83] [Aspergillus
nidulans FGSC A4]
Length = 1009
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 188/613 (30%), Positives = 323/613 (52%), Gaps = 57/613 (9%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++R +F+ + V D + A RLILP DR+R YG+KE ++ L++ + +
Sbjct: 76 PIERRRDIIERFISRWRKEVGDDIYPAFRLILPDKDRDRAMYGMKEKIIGKMLVNIMKID 135
Query: 82 KDSADAVRLINWRKGGAAPN---AGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ G + AG+F +V+ +R G + I+E+N+ LD+L+
Sbjct: 136 KNSEDGFNLLNWKLPGQSATSSMAGDFAGRCYDVVSKRPMRTEFGNMLIEEVNEKLDQLS 195
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
S+ E++ +L+ ++ N +E+ W+I IIL+ +KLG +E++ F +HPDAE+L++++
Sbjct: 196 SASKEEEQLPILAEFYRRMNPEELAWLIRIILRQMKLGATERTFFDVWHPDAENLYSISS 255
Query: 198 DLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLA---MRIGDAHAAWRKLHGKEVV--IE 250
L+ VC +L D N R +D + + + +PQLA M+ D A + + V IE
Sbjct: 256 SLRRVCWELHDPNIRLDAEDRGVSLMQCFQPQLAQFQMQSLDRMIARMRPTEDDPVFWIE 315
Query: 251 CKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNVL-- 293
K DG+R+Q+H G ++SR D++ YG+ ++++ ++
Sbjct: 316 EKLDGERMQLHMVSDASAPGGRRFRFWSRKAKDYTYLYGNGIYDEAGSLTRHLKDAFADG 375
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYFAFDVLYVGDTSVI 352
VD ILDGEM+ W+T + FG+ + A R+ + FD+LY+ +
Sbjct: 376 VDNLILDGEMITWNTEQDAPEPFGTLKTAALSEQRNPFRQGIHPLFRVFDILYLNGRDLT 435
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
+L++R LQKV+KP R E H A EVE ++
Sbjct: 436 RYTLRDRRNALQKVIKPVHRRFEV----HSYEE-------------ATTKAEVEASLRKA 478
Query: 413 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVA 471
+ EG+VLK+ S + +R W+K+KPEY+ G LD+++IGGYYGSG RGG+++
Sbjct: 479 VAEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLVVIGGYYGSGHRGGKLS 538
Query: 472 QFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
FL L + + + P + SFC+VG G + + + + ++ PK+ P +
Sbjct: 539 SFLCGLRVDEGQSSQGSNPTKCYSFCKVGGGFTAADYANIRHHTDGKWVEWN-PKKPPTT 597
Query: 529 FYQVT--NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
+ ++ ++ ERPD+WI+ PE S+++ + + ++ S+ F +LRFPR R+R DK
Sbjct: 598 YIELAGGDSQYERPDMWIK-PEDSVVICVKAASVSV-SDQFRIGLTLRFPRFKRLRMDKD 655
Query: 587 WHDCLDVQSFVEL 599
W L VQ F++L
Sbjct: 656 WKSALSVQEFLDL 668
>gi|212529366|ref|XP_002144840.1| DNA ligase, putative [Talaromyces marneffei ATCC 18224]
gi|210074238|gb|EEA28325.1| DNA ligase, putative [Talaromyces marneffei ATCC 18224]
Length = 1005
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 198/645 (30%), Positives = 340/645 (52%), Gaps = 65/645 (10%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++R ++F+ + V D + A RLI+P D +R YGLKE V+ L+ + +
Sbjct: 74 PQERRRDIIQRFISRWRKDVGDDIYPAFRLIVPDKDGDRAMYGLKEKVIGKLLVKIMKID 133
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ G A+ AG+F EVL RR G + I+E+ND LD+L+
Sbjct: 134 KNSEDGFNLLNWKLPGQSAASRMAGDFAGRCYEVLSRRPMRTDVGDMRIEEVNDRLDQLS 193
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
++ +++ +L+ ++ N +E+ W+I IIL+ +K+G +E++ F +HPDAE LF+++
Sbjct: 194 AASKEDQQLPILAEFYRRMNPEELMWLIRIILRQMKVGATERTFFDVWHPDAERLFSISS 253
Query: 198 DLKLVCEKLKDRNQRHK--RQDIEVGKAVRPQLA-MRIGDAHAAWRKLHGKE----VVIE 250
L+ VC +L D N R + + + + + +PQLA ++ +++ E IE
Sbjct: 254 SLRRVCWELHDPNIRLEGDERGVSLMQCFQPQLAQFQMHSFEKMVQRMRPTEEDPTFWIE 313
Query: 251 CKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNVL-- 293
K DG+R+Q+H + G + ++SR D++ YG+ ++++ ++ +
Sbjct: 314 EKLDGERMQLHMETDDSVEGGKKFCFWSRKAKDYTYLYGNGFFDPNGSLTRHLKDAFVDG 373
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYFAFDVLYVGDTSVI 352
VD ILDGEM+ WD + FG+ + A A RD + + FD+LY+ D +
Sbjct: 374 VDNIILDGEMITWDPEQDAPVPFGTLKTAALAEQRDPNAKGPRPLLRVFDILYLNDRELT 433
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
+L++R ++K ++P R E + P E A E+E ++
Sbjct: 434 LYTLRDRRNAIEKAIRPVHRRFE-----------IHPYTE------ATTAAEIEPILRKV 476
Query: 413 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVA 471
+E EG+VLK+ S + +R W+K+KPEY+ G LD++IIGGYYGSG+RGG ++
Sbjct: 477 VEEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGEALDLVIIGGYYGSGKRGGVLS 536
Query: 472 QFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV----TKLKPYFRKYEYPKRAPP 527
+L L ++ + SFC+VG G + + + K KP+ PK+ P
Sbjct: 537 SYLCGLRVDDRNESNSMKCYSFCKVGGGFTASDYANIRHHTDGKWKPW-----NPKKPPT 591
Query: 528 SFYQVTNN---SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYD 584
F ++ KERPD WI P++S+++ + + ++ SE F +LRFPR ++R D
Sbjct: 592 EFIELAGGEVAQKERPDEWIR-PDESVVVCVKAASVSV-SEEFRMGLTLRFPRFKKLRMD 649
Query: 585 KPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 629
K W L VQ F++L S+ QK KE+ + + + K+ ++S K
Sbjct: 650 KDWKSALSVQEFLDL-KSNVEKEQKEKEF-TVDNSRRKRIKASTK 692
>gi|402086148|gb|EJT81046.1| DNA ligase 4 [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 1015
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 204/634 (32%), Positives = 320/634 (50%), Gaps = 67/634 (10%)
Query: 21 KTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDAL 78
K P ++R +F+ + + V D++ ALRLILP DR+RG YGL+ES + L+ +
Sbjct: 88 KPSPHEQRRQIIERFIKRWRNEVGNDFYPALRLILPDKDRDRGVYGLRESAIGKLLVKLM 147
Query: 79 GMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLD 134
+S DS D L+ W+ G A+ AG+F E+L +RQ + G + I E+N LLD
Sbjct: 148 KISSDSEDGHSLLRWKLPGQTFASRMAGDFAGRCFEILSKRQMRTAPGDMRIAEVNALLD 207
Query: 135 RLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFN 194
RL+++ E++ + ++ NA+EM W++ I+L+ +K+G SE++ +HPD E LF+
Sbjct: 208 RLSAASGEVEQLPIFQVFYERMNAEEMMWLVRIVLRQMKVGASERTFLGMWHPDGEALFS 267
Query: 195 VTCDLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLAMRIGDAHAAWRKLHGK------E 246
V+ L+ VC +L + R +++D V + +PQLA H + E
Sbjct: 268 VSSSLRRVCWELCNPAVRLEQEDTGVTPMQCFQPQLAQFQMPESFERMITHMRPTDDDLE 327
Query: 247 VVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGHAMS---KIIEQNV--- 292
IE K DG+R+Q+H G ++SR D++ YG ++ + Q++
Sbjct: 328 FWIEEKLDGERMQMHMVEDDSVPGGKRFRFWSRKGKDYTYLYGSSLEDGKSALTQHLGGA 387
Query: 293 ---LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARD---GLSSDRQLCYFAFDVLYV 346
V ILDGEM+ WD L++ FG+ + A + SS+R L + FD+LY+
Sbjct: 388 FEPRVRNLILDGEMVTWDPKLDKMVAFGTLKTAALMGQQMPLDESSERPL-FRVFDILYL 446
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
D + +L++R L V+ RLE + P SH D +E
Sbjct: 447 NDQPITQYTLRDRRGALDSAVRGVHRRLE-IHPYDKATSH----------------DAIE 489
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGR 465
++ I + EG+VLK+ S + R+ WLK+KPEY+ G LD L++GGY+GSGR
Sbjct: 490 PLLRQVIADASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMDEYGESLDCLVVGGYFGSGR 549
Query: 466 RGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
RGG V+ FL L P + ISFC+VG G E+ + + + ++
Sbjct: 550 RGGTVSSFLCGLRVGENHVKAGIDPEKCISFCKVGGGFKAEDYAHIRHLTEGKWMGWDAS 609
Query: 523 KRAPPSFY-QVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRI 578
PPS Y ++ K ERPDVWI P+ S+++S+ + S+ F +LRFPR
Sbjct: 610 N--PPSKYIELGGGDKFQYERPDVWIR-PKDSVVISVKA-ASVASSDQFGMKMTLRFPRF 665
Query: 579 DRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKE 612
+R D+ W+ LDV F+ L QK KE
Sbjct: 666 RGLRSDRSWNSALDVDGFLRLREE---IEQKAKE 696
>gi|145530083|ref|XP_001450819.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418452|emb|CAK83422.1| unnamed protein product [Paramecium tetraurelia]
Length = 944
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 202/647 (31%), Positives = 327/647 (50%), Gaps = 67/647 (10%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPN---A 102
+ +RLI+P DR+RG Y L+E LA ALG+S D D R+ N+++ P
Sbjct: 104 YIIMRLIIPFQDRDRGVYKLQEKNLAKLFRSALGLSDD--DYHRMANYKQASMQPYGAPV 161
Query: 103 GNFPMVAAEVLQ---RRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQ 159
G+FPMV V++ R+ +I TI E++ LLD L +++ E+ V+ LIK A
Sbjct: 162 GDFPMVVHNVIKDYCRKDSII----TISEVDSLLDNLVKAQDTKEQELVVVDLIKVCTAD 217
Query: 160 EMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIE 219
E+ WII IILKDLK+G+ + + FH DA + +N T L VC++ +
Sbjct: 218 EILWIIRIILKDLKIGLKYEKLLQLFHKDAPEYYNATSSLNEVCKEF---------NVLR 268
Query: 220 VGKAVRPQLAMRIGDAHAAWRKL-HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS 278
+ A++P LA + + RKL GKE+++E KFDG+RIQ H I +F+R+ D++
Sbjct: 269 IFHAIKPMLAAK--KSPEEIRKLIEGKELLVETKFDGERIQCHFTPEVIRFFTRNSNDYT 326
Query: 279 E-YGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLC 337
Y + I+ Q+V ILDGE++V + FG N+ +A ++D LC
Sbjct: 327 YLYKDKLGDIVRQSVQAQCAILDGEIIVVNKETGDNVRFGLNKTVA-LSKDVNDDAFGLC 385
Query: 338 YFAFDVLYV-----GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGE 392
Y FD+LY+ + + + L R LLQ+++ P +LE +
Sbjct: 386 YKIFDILYLKTYQGQEVNTMSAPLSTRRSLLQRIIVPIPNQLEVV--------------- 430
Query: 393 PCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD- 451
+ + +E+ + F IE EGI++K + S++ P +RS KW+K+K +Y+ +D
Sbjct: 431 --QAATIKSFEELIQQFDMAIERNQEGIIIKQMDSQYLPNERSTKWVKMKGDYVENMTDN 488
Query: 452 LDVLIIGGYYGSGRRGGE-------VAQFLVALAERPAPDTYPRRFI-SFCRVGTGLSDE 503
D+L+IGGY+G+ E + FL+ LA++ + I F +VGTG +D
Sbjct: 489 CDLLVIGGYFGTQSHRVETFDEFDRITHFLMGLAQKIDKNQPTNSVILPFVKVGTGFTDN 548
Query: 504 ELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIR 563
EL + KL+ ++ K + P P ++ N +RPDV+I +P SII + + +
Sbjct: 549 ELSTIRNKLRNHWIKKQKPNYIPQNWNPGVN---DRPDVYINNPAHSIIFEVKA-AEITK 604
Query: 564 SEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGT----TQKGKEYGGLQ-D 618
S F Y+LRFPR + R DK W++ + Q +++ S T + KE Q D
Sbjct: 605 SNTFPTDYTLRFPRCYKTRMDKDWYEMMTTQDLSSMINDSQYTKNLKKKNDKEGNDKQTD 664
Query: 619 DKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
D+ KQ K ++I+ + F D +I E+++F F I+
Sbjct: 665 DERKQPLKKGGAHSKQITIM-TEFQGLDPRNITKESNLFVGCEFFIV 710
>gi|303314333|ref|XP_003067175.1| DNA ligase I, ATP-dependent family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240106843|gb|EER25030.1| DNA ligase I, ATP-dependent family protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 985
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 204/641 (31%), Positives = 322/641 (50%), Gaps = 77/641 (12%)
Query: 20 QKTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDA 77
Q P +R ++F+ + V D + A RLI+P DR+R YGLKE + L+
Sbjct: 67 QTLSPQELRRDIIQRFISRWRKEVGNDIYPAFRLIIPEKDRDRAMYGLKEKTIGKLLVKI 126
Query: 78 LGMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLL 133
+ + K+S D L+NW+ G A+ AG+F EV+ +R G +TI+E+ND L
Sbjct: 127 MKIDKNSEDGFNLLNWKLPGQSMASRMAGDFAGRCYEVISKRPIRTDVGNMTIQEVNDKL 186
Query: 134 DRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLF 193
D LA++ E+I VL + N +E+ W+I IIL+ +K+G +E++ F +HPDAE LF
Sbjct: 187 DVLAATSKEDEQIPVLEEFYRNMNPEELMWLIRIILRQMKVGATERTFFEIWHPDAESLF 246
Query: 194 NVTCDLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLA-------------MRIG-DAHA 237
+++ L+ VC +L D N R + + V + +PQLA MR+ D
Sbjct: 247 SISSSLRRVCWELYDPNVRLEADEARVTLMQCFQPQLAQFQMHSFPKMIERMRLSPDDPT 306
Query: 238 AWRKLHGKEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH------- 282
W IE K DG+RIQ+H G ++SR D++ YG+
Sbjct: 307 FW---------IEEKLDGERIQLHMMSDDSIPGGKRFGFWSRKAKDYTYLYGNGFYDENG 357
Query: 283 AMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYF 339
A+++ ++ VD ILDGEM+ WD + FG+ + A R+ S+ Q F
Sbjct: 358 ALTRHLKDAFADGVDNIILDGEMITWDPEQDAPLPFGTLKTAALSEQRNPFSATGQRPLF 417
Query: 340 -AFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLV 398
FD+LY+ D ++ +L++R L+ +KP RLE V P +
Sbjct: 418 RIFDILYLNDKALTRYTLRDRRRALEASIKPVHRRLE-----------VHPYE------I 460
Query: 399 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 457
++ ++E ++ + EG+VLK+ S + DR W+K+KPEY+ G LD ++I
Sbjct: 461 GNSAADIEPQLRKVVAEASEGLVLKNPSSPYRLNDRHDDWMKVKPEYMTEFGESLDCVVI 520
Query: 458 GGYYGSGRRGGEVAQFLVALAERPA---PDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 514
GGYYGSG+RGG +A FL L A P + SF +VG G + + +
Sbjct: 521 GGYYGSGKRGGGLASFLCGLRVDEAQVRQGASPMKCYSFLKVGGGFTAPDYANIRHHTDG 580
Query: 515 YFRKYEYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYS 572
++ + PK+ P F ++ ERPDVWI P++S++L + + T S+ F +
Sbjct: 581 KWKDWN-PKKPPTEFIELAGGDAQYERPDVWIR-PDESVVLCVKAASVTP-SDQFRLGLT 637
Query: 573 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEY 613
+RFPR R+R DK W L +Q F++L ++ QK KE+
Sbjct: 638 VRFPRFKRLRMDKDWKSALSIQEFMDLKANAE-REQKEKEF 677
>gi|299744934|ref|XP_002910852.1| DNA ligase IV [Coprinopsis cinerea okayama7#130]
gi|298406355|gb|EFI27358.1| DNA ligase IV [Coprinopsis cinerea okayama7#130]
Length = 970
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 212/624 (33%), Positives = 328/624 (52%), Gaps = 81/624 (12%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYC------DSVDYFSALRLILPSLDRERGSYG 64
VLV LF + +K+ + RK LD + D + LRL+LP DR+R YG
Sbjct: 42 VLVKLFEKLA----TERKQERRRKLLDAWFRHWRREKGFDLYPVLRLLLPQKDRDRAVYG 97
Query: 65 LKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGL 124
LKE LA I + + DA+RL+NW+K P + V EV+ +R +I G L
Sbjct: 98 LKEKNLAKTYIKLIPLGMRDPDAIRLLNWKK----PTERD---VLCEVVSKRSSVIEGTL 150
Query: 125 TIKELNDLLDRLASSENRAEKIS-VLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
TI ELN++LD +A + +++ S +L + + A E +WII IILKD+ + + E ++F
Sbjct: 151 TIDELNEILDDIAKNMGKSDVQSKILRRIYNNSTADEQRWIIRIILKDMNISVKETTVFA 210
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR--HKRQDIEVGKAVRPQLAMR-IGDAHAAWR 240
FHPDA+DL+N DLK V +L D ++R K ++I++ A P L R +
Sbjct: 211 VFHPDAQDLYNTCSDLKKVAWELWDPSRRLNAKDKEIQIFHAFAPMLCKRPTRKIEETVK 270
Query: 241 KLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKIIEQ--NV 292
+ G + +IE K DG+R+Q+HK G+E Y SR D++ YG +++ I+ +
Sbjct: 271 AMGGSKFIIEEKLDGERMQLHKRGNEYFYCSRKGKDYTYLYGKHIGAGSLTPFIDSAFDS 330
Query: 293 LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVI 352
+D ILDGEMLVWD R FG+ + A R ++ + C+ FD+LY+ S++
Sbjct: 331 RIDDIILDGEMLVWDPVSERNLPFGT-LKTAALGRSKKENNPRPCFKVFDLLYLNGMSLL 389
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
+++K R L+ +KP GR+E V ++ QGE +++ K ++
Sbjct: 390 DKTVKFRKNNLRHCIKPIPGRIE-FVEEY--------QGE--------TANDIRKRMEQV 432
Query: 413 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVA 471
+ENR EG+V+K +K+ R+ W+K+KPEY+ G +DVL++ G YGSG+RGG V+
Sbjct: 433 MENRGEGLVIKHPKAKYILNGRNTDWIKVKPEYMDNMGETVDVLVVAGNYGSGKRGGGVS 492
Query: 472 QFLVALAE--RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSF 529
+ A+ + RP D P SF R+GTGLS D V + KP+ K PK PP F
Sbjct: 493 TLICAVMDDRRPDSDDEPN---SFVRIGTGLS--FADYVWVRSKPW--KVWDPKN-PPEF 544
Query: 530 YQVTNNSKE-RPDVWIESPEKSI--ILSITSD-----IRTIR--------------SEVF 567
Q +E + DV++E PE+S+ I I SD + +R S+ +
Sbjct: 545 LQTAKKGQEDKGDVYLE-PEESVGLIYRIHSDANGGSLYCVRSSFILKVKAAEITPSDQY 603
Query: 568 SAPYSLRFPRIDRVRYDKPWHDCL 591
+++RFPR +R D DC+
Sbjct: 604 HMGFTMRFPRALAIRDDLSIADCM 627
>gi|119174468|ref|XP_001239595.1| hypothetical protein CIMG_09216 [Coccidioides immitis RS]
gi|121752757|sp|Q1DKE7.1|DNLI4_COCIM RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|392869794|gb|EAS28319.2| DNA ligase 4 [Coccidioides immitis RS]
Length = 985
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 202/641 (31%), Positives = 321/641 (50%), Gaps = 77/641 (12%)
Query: 20 QKTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDA 77
Q P +R ++F+ + V D + A RLI+P DR+R YGLKE + L+
Sbjct: 67 QTLSPQELRRDIIQRFISRWRKEVGNDIYPAFRLIIPEKDRDRAMYGLKEKTIGKLLVKI 126
Query: 78 LGMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLL 133
+ + K+S D L+NW+ G A+ AG+F EV+ +R G +TI+E+ND L
Sbjct: 127 MKIDKNSEDGFNLLNWKLPGQSMASRMAGDFAGRCYEVISKRPIRTDVGNMTIQEVNDKL 186
Query: 134 DRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLF 193
D LA++ E+I VL + N +E+ W+I IIL+ +K+G +E++ F +HPDAE LF
Sbjct: 187 DVLAATSKEDEQIPVLEEFYRNMNPEELMWLIRIILRQMKVGATERTFFEIWHPDAESLF 246
Query: 194 NVTCDLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLA-------------MRIG-DAHA 237
+++ L+ VC +L D N R + + V + +PQLA MR+ D
Sbjct: 247 SISSSLRRVCWELYDPNVRLEADEARVTLMQCFQPQLAQFQMHSFPKMIERMRLSPDDPT 306
Query: 238 AWRKLHGKEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH------- 282
W IE K DG+RIQ+H G ++SR D++ YG+
Sbjct: 307 FW---------IEEKLDGERIQLHMMSDDSIPGGKRFGFWSRKAKDYTYLYGNGFYDENG 357
Query: 283 AMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYF 339
A+++ ++ VD ILDGEM+ WD + FG+ + A R+ S+ Q F
Sbjct: 358 ALTRHLKDAFADGVDNIILDGEMITWDPEQDAPLPFGTLKTAALSEQRNPFSATGQRPLF 417
Query: 340 -AFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLV 398
FD+LY+ D ++ +L++R L+ +KP RLE + +
Sbjct: 418 RIFDILYLNDKALTRYTLRDRRRALEASIKPVHRRLEVHTYE-----------------I 460
Query: 399 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 457
++ ++E ++ + EG+VLK+ S + DR W+K+KPEY+ G LD ++I
Sbjct: 461 GNSAADIEPQLRKVVAEASEGLVLKNPNSPYRLNDRHDDWMKVKPEYMTEFGESLDCVVI 520
Query: 458 GGYYGSGRRGGEVAQFLVALAERPA---PDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 514
GGYYGSG+RGG +A FL L A P + SF +VG G + + +
Sbjct: 521 GGYYGSGKRGGGLASFLCGLRVDEAQVRQGASPMKCYSFLKVGGGFTAPDYANIRHHTDG 580
Query: 515 YFRKYEYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYS 572
++ + PK+ P F ++ ERPDVWI P++S++L + + T S+ F +
Sbjct: 581 KWKDWN-PKKPPTEFIELAGGDAQYERPDVWIR-PDESVVLCVKAASVTP-SDQFRLGLT 637
Query: 573 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEY 613
+RFPR R+R DK W L +Q F++L ++ QK KE+
Sbjct: 638 VRFPRFKRLRMDKDWKSALSIQEFMDLKANAE-REQKEKEF 677
>gi|320037449|gb|EFW19386.1| DNA ligase [Coccidioides posadasii str. Silveira]
Length = 985
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 204/641 (31%), Positives = 321/641 (50%), Gaps = 77/641 (12%)
Query: 20 QKTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDA 77
Q P +R ++F+ + V D + A RLI+P DR+R YGLKE + L+
Sbjct: 67 QTLSPQELRRDIIQRFISRWRKEVGNDIYPAFRLIIPEKDRDRAMYGLKEKTIGKLLVKI 126
Query: 78 LGMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLL 133
+ + K+S D L+NW+ G A+ AG+F EV+ +R G +TI+E+ND L
Sbjct: 127 MKIDKNSEDGFNLLNWKLPGQSMASRMAGDFAGRCYEVISKRPIRTDVGNMTIQEVNDKL 186
Query: 134 DRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLF 193
D LA++ E+I VL + N +E+ W+I IIL+ K+G +E++ F +HPDAE LF
Sbjct: 187 DVLAATSKEDEQIPVLEEFYRNMNPEELMWLIRIILRQTKVGATERTFFEIWHPDAESLF 246
Query: 194 NVTCDLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLA-------------MRIG-DAHA 237
+++ L+ VC +L D N R + + V + +PQLA MR+ D
Sbjct: 247 SISSSLRRVCWELYDPNVRLEADEARVTLMQCFQPQLAQFQMHSFPKMIERMRLSPDDPT 306
Query: 238 AWRKLHGKEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH------- 282
W IE K DG+RIQ+H G ++SR D++ YG+
Sbjct: 307 FW---------IEEKLDGERIQLHMMSDDSIPGGKRFGFWSRKAKDYTYLYGNGFYDENG 357
Query: 283 AMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYF 339
A+++ ++ VD ILDGEM+ WD + FG+ + A R+ S+ Q F
Sbjct: 358 ALTRHLKDAFADGVDNIILDGEMITWDPEQDAPLPFGTLKTAALSEQRNPFSATGQRPLF 417
Query: 340 -AFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLV 398
FD+LY+ D ++ +L++R L+ +KP RLE V P +
Sbjct: 418 RIFDILYLNDKALTRYTLRDRRRALEASIKPVHRRLE-----------VHPYE------I 460
Query: 399 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 457
++ ++E ++ + EG+VLK+ S + DR W+K+KPEY+ G LD ++I
Sbjct: 461 GNSAADIEPQLRKVVAEASEGLVLKNPSSPYRLNDRHDDWMKVKPEYMTEFGESLDCVVI 520
Query: 458 GGYYGSGRRGGEVAQFLVALAERPA---PDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 514
GGYYGSG+RGG +A FL L A P + SF +VG G + + +
Sbjct: 521 GGYYGSGKRGGGLASFLCGLRVDEAQVRQGASPMKCYSFLKVGGGFTAPDYANIRHHTDG 580
Query: 515 YFRKYEYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYS 572
++ + PK+ P F ++ ERPDVWI P++S++L + + T S+ F +
Sbjct: 581 KWKDWN-PKKPPTEFIELAGGDAQYERPDVWIR-PDESVVLCVKAASVTP-SDQFRLGLT 637
Query: 573 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEY 613
+RFPR R+R DK W L +Q F++L ++ QK KE+
Sbjct: 638 VRFPRFKRLRMDKDWKSALSIQEFMDLKANAE-REQKEKEF 677
>gi|116207608|ref|XP_001229613.1| hypothetical protein CHGG_03097 [Chaetomium globosum CBS 148.51]
gi|88183694|gb|EAQ91162.1| hypothetical protein CHGG_03097 [Chaetomium globosum CBS 148.51]
Length = 968
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 207/711 (29%), Positives = 350/711 (49%), Gaps = 103/711 (14%)
Query: 27 KKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
++R +F+ + V D++ A+RLILP DR+RG YGLKE+ + L+ + + ++S
Sbjct: 33 QRRHIIERFMARWRAEVGPDFYPAMRLILPDKDRDRGVYGLKENSIGKLLVKVMKIDRNS 92
Query: 85 ADAVRLINWR------------------------KGGAAPNAGNFPMVAAEVLQRRQGMI 120
D L++W+ G+ AG+F E++ +RQ M
Sbjct: 93 EDGYALMHWKLPGGGGGGRGDRGGGGGGGGGGRFGDGSVTTAGDFAGRCFEIVGKRQ-MR 151
Query: 121 S--GGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE 178
S G TI ++N +LDRLA + AE++ + + NA+E+ W++ IILK++K+G +E
Sbjct: 152 SEPGEFTIGDVNVMLDRLAGASGEAEQLPIFEEFYQGMNAEELMWLVRIILKEMKVGATE 211
Query: 179 KSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAH 236
++ +HPDAE LF+V+ L+ VC +L D R ++Q+ + + +PQLA
Sbjct: 212 RTFLGLWHPDAEPLFSVSSSLRRVCWELHDPEFRLEQQETGVTLMSCFQPQLAQF--QTT 269
Query: 237 AAWRKL--------HGKEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSEYG 281
++ KL +E IE K DG+R+Q+H G + ++SR EY
Sbjct: 270 TSFAKLVSNLGCSEEDQEFWIEEKLDGERMQMHMQEDDNVPGGYKFAFWSRK---AKEYT 326
Query: 282 HAMSKIIEQN-------------VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAAR 327
+ +E N V ILDGEM+ WD +++ FG+ + A +
Sbjct: 327 YLYGSGLEDNNSALTRHLKNAFDSRVRNLILDGEMITWDPEVDKMVPFGTLKTAALDQQK 386
Query: 328 DGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHV 387
+ + + Y FD+L + D S+ +L +RH L++ VK GRLE +
Sbjct: 387 NPFHNGPRPLYRVFDILLLNDKSLTEYTLADRHRALERAVKGEPGRLE-----------I 435
Query: 388 RPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIR 447
P + A + DE+E + + EG+VLK+ S+++ R+ W+K+KPEY+
Sbjct: 436 HPY------ITAKSADEIEPHLRVIVAEASEGLVLKNPRSRYQLNSRNNDWIKVKPEYMS 489
Query: 448 A-GSDLDVLIIGGYYGSGRRGGEVAQFLVALA-----ERPAPDTYPRRFISFCRVGTGLS 501
G LD+++IGGY+GSGRRGG ++ FL L R + +SFC+VG G
Sbjct: 490 EFGESLDLVVIGGYWGSGRRGGTLSSFLCGLRVSENFVRSGAAASREKCLSFCKVGGGFK 549
Query: 502 DEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSD 558
E+ + + +++++ P P F ++ + ERPDVWI P +S+++SI +
Sbjct: 550 AEDYGEMRHHTEGKWKEWD-PASPPSEFIELGGGERLQYERPDVWIR-PSESVVISIKAS 607
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQD 618
S+ F+A ++LRFPR ++R DK W +DV L Q+ KE ++
Sbjct: 608 -SFAPSDQFAAGWTLRFPRFRKMRLDKAWDAGMDVDESEAL---RTKVKQEEKERKAMEM 663
Query: 619 DKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDI----KGETSIFSDMVFCIL 665
+ K R K +KK++ I + ++ K +T++F + FC+L
Sbjct: 664 ESRK--RKPAKRQKKDLVIAGAADAAKQTAEFLAVKKPKTNVFQGLDFCVL 712
>gi|426196726|gb|EKV46654.1| hypothetical protein AGABI2DRAFT_206080 [Agaricus bisporus var.
bisporus H97]
Length = 1915
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 209/688 (30%), Positives = 350/688 (50%), Gaps = 81/688 (11%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCD------SVDYFSALRLILPSLDRERGSYG 64
VL LF + +K+ + +K LD + D + LRL+LP DRER YG
Sbjct: 34 VLAGLFEKLS----TERKQDRRKKLLDAWFTHWRREKGYDLYPVLRLLLPQKDRERAVYG 89
Query: 65 LKESVLANCLIDALGMSKDSADAVRLINWRKGGA-APNAGNFPMVAAEVLQRRQGMISGG 123
LKE LA I + + DA+R++NW++ ++G+FP V EV+ +R +I G
Sbjct: 90 LKEKNLAKTYIKLIPLGMRDPDAIRMLNWKRPTEREKSSGDFPAVLYEVISKRSSVIEGS 149
Query: 124 LTIKELNDLLDRLASSENRAEKIS-VLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
L++ ELN +LD LA + + + S +L + K+ A+E +WII IILKD+++ + E ++F
Sbjct: 150 LSVDELNHILDELAQNMGKQDVQSKILQRIYNKSTAEEQRWIIRIILKDMQISVKETTVF 209
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMR-IGDAHAAW 239
FHPDA+DL+N DLK V +L D + R QD +++ P L+ R
Sbjct: 210 SVFHPDAQDLYNTCSDLKRVAWELWDPSFRLNVQDKMVQLFHTFAPMLSKRPTRKLEDTV 269
Query: 240 RKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YG-HAMSKIIEQNV----- 292
R++ G E +IE K DG+R+Q+HK G+E +Y SR D++ YG H + + ++
Sbjct: 270 REMGGLEFIIEEKLDGERMQLHKRGNEYYYSSRKGKDYTYLYGKHVGTGSLTPHIDKAFD 329
Query: 293 -LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD--RQLCYFAFDVLYVGDT 349
VD ILDGEMLVWD R FG+ + AA D +D + C+ FD+LY+
Sbjct: 330 SRVDDIILDGEMLVWDPVTERNLPFGT---LKTAALDKTQADINPRPCFKVFDLLYLNGQ 386
Query: 350 SVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFF 409
S+IH+ L R L+ + KGR+E + G + ++ +
Sbjct: 387 SLIHKPLTFRKRNLKHCITQVKGRIECVAEFKGTTAK-----------------DIRERM 429
Query: 410 KETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGG 468
+E + R EG+++K SK+ R W+K+KPEY+ G +D+L++ G YG+G+R G
Sbjct: 430 EEVMAARGEGLIIKHPLSKYTLNGRIMDWIKVKPEYMDNMGETVDLLVVAGKYGTGKRAG 489
Query: 469 EVAQFLVAL--AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
V+ + A+ R D ++ +F R+G+GLS D V + KP+ + ++
Sbjct: 490 GVSTLICAVFEDRRIDEDDDEPKYSTFVRIGSGLS--YADYVWIRAKPW---KVWNEQQN 544
Query: 527 PSFYQVTNNSKE-RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
PSF +S E + D+++E PE S I+ I + + S+ + +++RFPR +R D
Sbjct: 545 PSFLLTEKHSHEDKGDLFLE-PEDSFIVKIKA-AEIVPSDQYYMGFTMRFPRAMSIRDDL 602
Query: 586 PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKG--------EKKNVSI 637
DC+ + +E G++ ++ ++ S G ++K +I
Sbjct: 603 TIADCMTASAVLE----------------GMKTERKRKMESDIAGLHPKRSAKKRKKATI 646
Query: 638 VPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+P + ++ ++ E++IF M F ++
Sbjct: 647 IP-QYQGPNLKNVSIESNIFDGMKFVVM 673
>gi|74830325|emb|CAI39048.1| DNA ligase IV [Paramecium tetraurelia]
Length = 957
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 190/597 (31%), Positives = 306/597 (51%), Gaps = 61/597 (10%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPN---A 102
+ +RLI+P DR+RG Y L+E LA ALG+S D D R+ N+++ P
Sbjct: 104 YIIMRLIIPFQDRDRGVYKLQEKNLAKLFRLALGLSDD--DYHRMANYKQASMQPYGAPV 161
Query: 103 GNFPMVAAEVLQ---RRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQ 159
G+FPMV V++ R+ +I TI E++ LLD L +++ E+ V+ LIK A
Sbjct: 162 GDFPMVVHNVIKDYCRKDSII----TISEVDQLLDNLVKAQDTKEQELVIVDLIKVCTAD 217
Query: 160 EMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIE 219
E+ WII IILKDLK+G+ + + FH DA + +N T LK VC++ +
Sbjct: 218 EILWIIRIILKDLKIGLKYEKLLQLFHKDAPEYYNATSSLKEVCKEF---------NVLR 268
Query: 220 VGKAVRPQLAMRIGDAHAAWRKL-HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS 278
+ A++P LA + + RKL GKE+++E KFDG+RIQ H I +F+R+ D++
Sbjct: 269 IFHAIKPMLAAK--KSPEEIRKLIEGKELLVETKFDGERIQCHFTPEVIRFFTRNSNDYT 326
Query: 279 E-YGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLC 337
Y + I+ Q+V ILDGE++V + FG N+ +A ++D LC
Sbjct: 327 YLYKDKLGDIVRQSVQAQCAILDGEIIVVNKETGDNVRFGLNKTVA-LSKDVNDDAFGLC 385
Query: 338 YFAFDVLYV-----GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGE 392
Y FD+LY+ + + + L R LLQ+++ P +LE +
Sbjct: 386 YKIFDILYLKTYQGQEVNTMSAPLSTRRSLLQRIIVPIPNQLEVV--------------- 430
Query: 393 PCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD- 451
+ + +E+ + F IE EGI++K + S++ P +RS KW+K+K +Y+ +D
Sbjct: 431 --QAATIKSFEELIQQFDMAIERNQEGIIIKQMDSQYLPNERSTKWVKMKGDYVENMTDN 488
Query: 452 LDVLIIGGYYGSGRRGGE-------VAQFLVALAERPAPDTYPRRFI-SFCRVGTGLSDE 503
D+L+IGGY+G+ E + FL+ LA++ + I F +VGTG +D
Sbjct: 489 CDLLVIGGYFGTQSHRVETFDEFDRITHFLMGLAQKIDKNQPTNSVILPFVKVGTGFTDN 548
Query: 504 ELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIR 563
EL + KL+ ++ K + P P ++ N +RPDV+I +P SII + + +
Sbjct: 549 ELSTIRNKLRNHWIKKQKPNYIPQNWNPGVN---DRPDVYINNPAHSIIFEVKA-AEITK 604
Query: 564 SEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDK 620
S F Y+LRFPR + R DK W++ + Q +++ S T K+ +DK
Sbjct: 605 SNTFPTDYTLRFPRCYKTRMDKDWYEMMTTQDLSSMINDSQYTKNLKKKNDKEGNDK 661
>gi|121713768|ref|XP_001274495.1| DNA ligase, putative [Aspergillus clavatus NRRL 1]
gi|119402648|gb|EAW13069.1| DNA ligase, putative [Aspergillus clavatus NRRL 1]
Length = 1029
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 193/617 (31%), Positives = 324/617 (52%), Gaps = 64/617 (10%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++R +F+ + V D + A RLILP DR+R YG+KE + L+ + +
Sbjct: 81 PLERRRDVIERFISRWRKEVGDDIYPAFRLILPDKDRDRAMYGIKEKAIGKMLVKIMKID 140
Query: 82 KDSADAVRLINWRKGGAAPN---AGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ G A AG+F +VL +R G ++I+E+N+ LD L+
Sbjct: 141 KNSEDGFNLLNWKLPGQAAATRMAGDFAGRCYDVLSKRPMRTDVGDMSIEEVNEKLDNLS 200
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
++ +++ +L+ ++ N +E+ W+I IIL+ +K+G +E++ F +HPDAE+L++++
Sbjct: 201 AASKEEQQLPILAEFYRRMNPEELMWLIRIILRQMKVGATERTFFDVWHPDAENLYSISS 260
Query: 198 DLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLA---MRIGDAHAAWRKLHGKEVV--IE 250
L+ VC +L D N R +D I + + +PQLA M+ D + + + V IE
Sbjct: 261 SLRRVCWELHDPNIRLDAEDRGISLMQCFQPQLAQFQMQSLDKMVSRMRPTEDDPVFWIE 320
Query: 251 CKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNVL-- 293
K DG+R+Q+H G ++SR +++ YG+ ++++ ++
Sbjct: 321 EKLDGERMQLHMESDDSVPGGRRFRFWSRKAKEYTYLYGNGIYDENGSLTRHLKDAFADG 380
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYF-AFDVLYVGDTSV 351
VD ILDGEM+ WD + A FG+ + A A R+ S+ F FD+LY+ +
Sbjct: 381 VDSLILDGEMITWDPEQDAPAPFGTLKTAALAEQRNPFSTTGARPLFRVFDILYLNGRDL 440
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+L++R LQK V+P R E + P E A DEVE ++
Sbjct: 441 TGYTLRDRRNALQKSVRPVHRRFE-----------IHPYEE------ATTKDEVEVALRK 483
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEV 470
+ EG+VLK+ S + +R W+K+KPEY+ G LD+++IGGY+GSGRRGG +
Sbjct: 484 VVAEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVIGGYFGSGRRGGNL 543
Query: 471 AQFLVALAERPAPDTY------PRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 524
+ FL L A DT+ + SFC+VG G + + + + ++ PK+
Sbjct: 544 SSFLCGLR---ADDTHASQGSNASKCYSFCKVGGGFNAADYANIRHHTDGKWVEWN-PKK 599
Query: 525 APPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVR 582
P ++ ++ ERPD+WI+ PE S+++ + + ++ S+ F +LRFPR R+R
Sbjct: 600 PPTAYIELAGKDAQYERPDMWIK-PEDSVVVCVKAASVSV-SDQFRIGLTLRFPRFKRLR 657
Query: 583 YDKPWHDCLDVQSFVEL 599
DK W L VQ F++L
Sbjct: 658 MDKDWRSALSVQGFLDL 674
>gi|74830330|emb|CAI39049.1| DNA ligase IV [Paramecium tetraurelia]
Length = 957
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 189/597 (31%), Positives = 305/597 (51%), Gaps = 61/597 (10%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPN---A 102
+ +RLI+P DR+RG Y L+E LA ALG+S D D R+ N+++ P
Sbjct: 104 YIIMRLIIPFQDRDRGVYKLQEKNLAKLFRSALGLSDD--DYHRMANYKQASMQPYGAPV 161
Query: 103 GNFPMVAAEVLQ---RRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQ 159
G+FPMV V++ R+ +I TI E++ LLD L +++ E+ V+ LIK A
Sbjct: 162 GDFPMVVHNVIKDYCRKDSII----TISEVDSLLDNLVKAQDTKEQELVVVDLIKVCTAD 217
Query: 160 EMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIE 219
E+ WII IILKDLK+G+ + + FH DA + +N T L VC++ +
Sbjct: 218 EILWIIRIILKDLKIGLKYEKLLQLFHKDAPEYYNATSSLNEVCKEF---------NVLR 268
Query: 220 VGKAVRPQLAMRIGDAHAAWRKL-HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS 278
+ A++P LA + + RKL GKE+++E KFDG+RIQ H I +F+R+ D++
Sbjct: 269 IFHAIKPMLAAK--KSPEEIRKLIEGKELLVETKFDGERIQCHFTPEVIRFFTRNSNDYT 326
Query: 279 E-YGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLC 337
Y + I+ Q+V ILDGE++V + FG N+ +A ++D LC
Sbjct: 327 YLYKDKLGDIVRQSVQAQCAILDGEIIVVNKETGDNVRFGLNKTVA-LSKDVNDDAFGLC 385
Query: 338 YFAFDVLYV-----GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGE 392
Y FD+LY+ + + + L R LLQ+++ P +LE +
Sbjct: 386 YKIFDILYLKTYQGQEVNTMSAPLSTRRSLLQRIIVPIPNQLEVV--------------- 430
Query: 393 PCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD- 451
+ + +E+ + F IE EGI++K + S++ P +RS KW+K+K +Y+ +D
Sbjct: 431 --QAATIKSFEELIQQFDMAIERNQEGIIIKQMDSQYLPNERSTKWVKMKGDYVENMTDN 488
Query: 452 LDVLIIGGYYGSGRRGGE-------VAQFLVALAERPAPDTYPRRFI-SFCRVGTGLSDE 503
D+L+IGGY+G+ E + FL+ LA++ + I F +VGTG +D
Sbjct: 489 CDLLVIGGYFGTQSHRVETFDEFDRITHFLMGLAQKIDKNQPTNSVILPFVKVGTGFTDN 548
Query: 504 ELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIR 563
EL + KL+ ++ K + P P ++ N +RPDV+I +P SII + + +
Sbjct: 549 ELSTIRNKLRNHWIKKQKPNYIPQNWNPGVN---DRPDVYINNPAHSIIFEVKA-AEITK 604
Query: 564 SEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDK 620
S F Y+LRFPR + R DK W++ + Q +++ S T K+ +DK
Sbjct: 605 SNTFPTDYTLRFPRCYKTRMDKDWYEMMTTQDLSSMINDSQYTKNLKKKNDKEGNDK 661
>gi|169614756|ref|XP_001800794.1| hypothetical protein SNOG_10525 [Phaeosphaeria nodorum SN15]
gi|121935152|sp|Q0UCI9.1|DNLI4_PHANO RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|111060799|gb|EAT81919.1| hypothetical protein SNOG_10525 [Phaeosphaeria nodorum SN15]
Length = 990
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 198/623 (31%), Positives = 319/623 (51%), Gaps = 69/623 (11%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P KR+ +F+ ++ +V D++ A+RLI+P DR+R YGLKE +A LI +S
Sbjct: 81 PHEAKRNIIERFIASWRKTVGNDFYPAMRLIIPDKDRDRAMYGLKEKAIAKVLIKLTKIS 140
Query: 82 KDSADAVRLINWRKGG-----AAPNAGNFPMVAAEVLQRRQ-GMISGGLTIKELNDLLDR 135
KDS DA +++NW+ G +A AG+F +VL RQ G ++I E+N+ LD+
Sbjct: 141 KDSDDAKQMLNWKLPGQLHKASASTAGDFAGRCYQVLSSRQLNTKLGDMSIAEVNNALDK 200
Query: 136 LASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNV 195
L+ + E++ + ++ NA+EM W+I IIL+ +K+G +EK+ +HPDAE LFN+
Sbjct: 201 LSQLGSEDEQVKIFQRFNRRMNAEEMTWLIRIILRQMKIGATEKTFLDIWHPDAETLFNI 260
Query: 196 TCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAWRKLHGK-------- 245
+ +L+ VC +L D R + +D + + + +PQLA D ++ K+ +
Sbjct: 261 SSNLRRVCWELYDPKVRLEGEDTGLSLMQCFQPQLAA-FQDKGGSFEKIVARLQANSDDD 319
Query: 246 EVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH--------AMSKIIE 289
IE K DG+R+Q+H G ++SR D++ YG A+++ I
Sbjct: 320 SFWIEEKLDGERMQLHMIEDPEAPGGKLFGFWSRKAKDYAYLYGKHLQGDEAGALTRFIT 379
Query: 290 QNV--LVDRCILDGEMLVWDTSLNRFAEFGSNQEIA---KAARDGLSSDRQLCYFAFDVL 344
V ILDGEM+ WD ++ FG+ + A K + S+ ++ + FD +
Sbjct: 380 DAFGKNVRNIILDGEMITWDMDVDHIVGFGTLKTAAISEKENKTDKSTGQRPLFRVFDCV 439
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
Y+ D + +L++R L+ VK K RLE + P E AH+ E
Sbjct: 440 YLNDKLLTPYTLRDRRRALESAVKDVKRRLE-----------IHPYIE------AHSHTE 482
Query: 405 VEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGS 463
+E ++ + EG+VLK+ S + DR+ W+K+KPEY+ G LD +++GGY+GS
Sbjct: 483 IEPALRKVVAESSEGLVLKNPRSMYRLNDRNADWMKVKPEYMSEFGESLDCIVVGGYFGS 542
Query: 464 GRRGGEVAQFLVALA----ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
G RGG + FL AL +P Y + + SF +VG G S E+ A+ + + ++ +
Sbjct: 543 GHRGGAHSSFLCALLLNKDAKPGDADYEKCW-SFFKVGGGFSREDYAAIRGRTEGKWKDW 601
Query: 520 EYPKRAPPSFY---QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 576
+ P+R PP N ERPD WI P S++L + S+ F +LRFP
Sbjct: 602 D-PRRPPPIIELGGHEQNRQHERPDQWIH-PSDSVVLECKA-ASVEGSDKFRFNLTLRFP 658
Query: 577 RIDRVRYDKPWHDCLDVQSFVEL 599
R +R DK W L + F E+
Sbjct: 659 RFRMLRTDKRWDQALSREEFYEI 681
>gi|296420167|ref|XP_002839652.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635835|emb|CAZ83843.1| unnamed protein product [Tuber melanosporum]
Length = 991
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 194/648 (29%), Positives = 319/648 (49%), Gaps = 64/648 (9%)
Query: 23 KPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGM 80
KP +R+ +F+ + + V D + LRLIL DR+R Y LKE + L+ + +
Sbjct: 83 KPHEIRRNIIDRFISRWRNEVGNDIYPTLRLILCEKDRDRSVYHLKEKTIGRLLVKVMKI 142
Query: 81 SKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLASS 139
+KDS D LINW++ G + +AG+F + E++++R + G LTI ++N +LDRL+ +
Sbjct: 143 NKDSDDGYSLINWKQPGTSKSAGDFALRCYEIIRKRPMRTTPGSLTISQVNSMLDRLSLA 202
Query: 140 ENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDL 199
E++ +++ NA E+ W+I II++ +K+G +E++ F +HPDA LFN++ L
Sbjct: 203 SKEEEQLPIMTEFYNNMNASELMWLIRIIMRQMKVGATERTFFDAWHPDAAALFNISSSL 262
Query: 200 KLVCEKLKDRNQRHKR--QDIEVGKAVRPQLAM----RIGDAHAAWRKLHGKEVV-IECK 252
K VC +L D R + + + +PQLA + DA A + IE K
Sbjct: 263 KRVCWELSDPEFRMDSDGKSVSLMSCFQPQLAQFQKRSLDDAVKAMHLTPEDPIFWIEEK 322
Query: 253 FDGDRIQIHKNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVL-------VDRCILDGEML 304
DG+R+Q+H ++SR D++ YG L V ILDGEM+
Sbjct: 323 LDGERMQMHYENGNFMFWSRKAKDYTRLYGSCFDDGSLTRHLRGAFDDGVKSIILDGEMI 382
Query: 305 VWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELL 363
WD L+ FG+ + A + R+ + + FD+L++ +I+ SL++R L
Sbjct: 383 TWDPRLDCIVAFGTLKTAALEGIRNPFGDGPRPLFKVFDILHLNGGCLINYSLRDRRMAL 442
Query: 364 QKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLK 423
++ VK R+E H A E+E+ ++ I EG+V+K
Sbjct: 443 ERSVKTIDRRMEV----HKYEE-------------AREAVEIERALRKVIAEASEGLVIK 485
Query: 424 DLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVAL---AE 479
+ S + DR+ W+K+KPEY+ G LD++++GGY+GSG RGG ++ +L L
Sbjct: 486 NPRSIYRLNDRNDDWMKVKPEYMTEFGESLDLVVLGGYWGSGTRGGILSSYLCGLRVDGN 545
Query: 480 RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSK-- 537
P P +F SFC+VG G + + + + ++ PK+ P ++ +
Sbjct: 546 HLKPGEDPMKFRSFCKVGGGFTANDYSKIAHMTDSQWVPWD-PKKPPSEHIEIVAGGRGV 604
Query: 538 ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFV 597
++PDVWI P+KSI+L + + + ++ F SLRFPR ++R DK W L + +
Sbjct: 605 DQPDVWIR-PDKSIVLEVKA-ASIVPTDEFRVGKSLRFPRFRQIREDKDWQTALSISELI 662
Query: 598 EL--------------VHSSNGTTQKGK----EYGGL-QDDKPKQFRS 626
L + N T + GK EY L DKP F S
Sbjct: 663 ALKEEVEKEKADEEKRIEVENRTRRAGKRMKREYTVLGASDKPADFVS 710
>gi|346324665|gb|EGX94262.1| DNA ligase, putative [Cordyceps militaris CM01]
Length = 1001
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 214/690 (31%), Positives = 355/690 (51%), Gaps = 78/690 (11%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++R +F+ + V D++ ALRLILP DR+RG YGLKE+ + L+ + +
Sbjct: 83 PQEQRRHIIDRFITRWRKEVGPDFYPALRLILPDKDRDRGVYGLKENAIGKLLVKLMKID 142
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L++W+ G AA AG+F E + +R G +TI E+N+ LD+LA
Sbjct: 143 KNSEDGYNLLHWKLPGQTTAARLAGDFAGRCYEAISKRPMRTEPGTMTIAEVNEQLDKLA 202
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
+S +E + V T + NA+E+ W+I I+L+ +K+G +EK++ + +HPD E LF+V+
Sbjct: 203 ASAGESENVRVFETFYNRMNAEELLWLIRIVLRQMKVGATEKTLLYLWHPDGESLFSVSS 262
Query: 198 DLKLVCEKLKDRNQRHKRQ--DIEVGKAVRPQLAMRIGDAHAAWRKL--------HGKEV 247
L+ VC +L D R + + + + + +PQLA A+++K+ E
Sbjct: 263 SLRRVCWELYDPAVRLESEGASLTLMQCFQPQLAQ--FQTPASFKKMTELLRPTPDDPEF 320
Query: 248 VIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNV 292
IE K DG+R+Q+H G ++SR +++ YGH ++++ ++
Sbjct: 321 WIEEKLDGERMQMHMMEDPSTPGGKRFCFWSRKAKEYTYLYGHGFHDSNSSLTRHLQSAF 380
Query: 293 L--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS----SDRQLCYFAFDVLYV 346
V ILDGEM+ WD S+++ FG+ + A A + S S + + FD+LY+
Sbjct: 381 ASGVRNLILDGEMITWDMSVDKMVPFGTLKTAALAEQQNRSGSDASGHRPLFRVFDILYL 440
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
D + +L++RH L+K V+P RLE H S P D +E
Sbjct: 441 NDKQLTQYTLRDRHHALEKAVQPVHRRLEI----HSYTSATSP-------------DAIE 483
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGR 465
++ + + EG+VLK+ S + R+ WLK+KPEY+ G LD L+IGGYYGSG+
Sbjct: 484 PLLRDVVASASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCLVIGGYYGSGK 543
Query: 466 RGGEVAQFLVALAERPAPDTY-----PRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
RGG ++ +L L R +P+ P + SF +VG G E+ + + + + +
Sbjct: 544 RGGTLSSYLCGL--RASPNQVQAGADPEKCFSFFKVGGGFRAEDYAEIRHRTEGKW--ID 599
Query: 521 YPKRAPPS-FYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 576
+ R PPS F ++ ERPDVWI P+ SI++S+ + S+ F+ Y+LRFP
Sbjct: 600 WDARHPPSQFIELGGGEAKQLERPDVWIR-PKDSIVVSVKA-ASVGPSDSFARGYTLRFP 657
Query: 577 RIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVS 636
R R+R D+ W L V F L ++ ++ K+ +DK K+ R+ ++ K+ +
Sbjct: 658 RFRRLRLDRAWDSALSVDEFQSLKQHAD---EESKDKAMTMEDK-KRGRNPKR-VKRELV 712
Query: 637 IVPSHFLQTDVS-DIKGETSIFSDMVFCIL 665
IV + + T +F + FC+L
Sbjct: 713 IVGGESTKGPLPLQTTRTTGLFDGIEFCVL 742
>gi|85109337|ref|XP_962868.1| hypothetical protein NCU06264 [Neurospora crassa OR74A]
gi|74617328|sp|Q7SB49.1|DNLI4_NEUCR RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=DNA repair and recombination protein mus-53;
AltName: Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|28924508|gb|EAA33632.1| hypothetical protein NCU06264 [Neurospora crassa OR74A]
gi|115635893|dbj|BAF34364.1| DNA repair and recombination protein MUS53 [Neurospora crassa]
Length = 1046
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 184/615 (29%), Positives = 318/615 (51%), Gaps = 69/615 (11%)
Query: 27 KKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
++R +F+ + V D++ A+RLILP DR+RG YGLKE+ + L+ + + ++S
Sbjct: 87 QRRHIIERFMSRWRSEVGNDFYPAMRLILPDKDRDRGVYGLKENTIGKLLVKVMKIDRNS 146
Query: 85 ADAVRLINWR----KGGAAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLASS 139
D L++W+ + G + + G+F EV+ +R G LTI ++N LLDRLA++
Sbjct: 147 EDGYNLMHWKLPGGQSGVSRSVGDFAGRCLEVVSKRAMRAQPGDLTIADVNVLLDRLAAA 206
Query: 140 ENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDL 199
AE++ + ++ NA+EM W++ IILKD+++G +E++ + +HPDAE LF+V+ L
Sbjct: 207 SGEAEQLPIFEEFYRQMNAEEMMWLVRIILKDMRVGATERTFLNLWHPDAEALFSVSSSL 266
Query: 200 KLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAWRKL--------HGKEVVI 249
+ VC +L D R ++Q+ I++ + +PQLA W KL E I
Sbjct: 267 RRVCWELFDPEFRLEQQETGIKLMQCFQPQLAQF--QMTTTWEKLVKNLGVTEENPEFWI 324
Query: 250 ECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVL-------- 293
E K DG+R+Q+H G ++SR D++ YG ++ EQ+ L
Sbjct: 325 EEKLDGERMQMHMIEDDTVPGGFRFAFWSRKAKDYTYLYGESLGD--EQSALTRHLHKAF 382
Query: 294 ---VDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYFAFDVLYVGDT 349
V ILDGEM+ WD +++ FG+ + A + ++ + + Y FD+L + D
Sbjct: 383 DDGVRNLILDGEMITWDIDIDKMVPFGTLKTAALEQQKNPSKAGPRPLYRVFDILLLNDK 442
Query: 350 SVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFF 409
+ +L +R L++ V RLE L + A + D +E
Sbjct: 443 PLTEYTLNDRRRALERAVVGVHRRLEILPFER-----------------ATSPDAIEPLL 485
Query: 410 KETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGG 468
+ + EG+VLK+ S++ R+ W+K+KPEY+ G LD +++GGY+GSGRRGG
Sbjct: 486 RRVVAEASEGLVLKNPRSRYSLNSRNNDWIKVKPEYMSDFGESLDCVVVGGYFGSGRRGG 545
Query: 469 EVAQFLVALAER----PAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 524
++ FL + + + + +SF +VG G E+ + + ++ ++ P
Sbjct: 546 TLSSFLCGVRVSQNFIKSGNASAEKCLSFVKVGGGFKAEDYAEIRHHTEGKWQDWD-PSS 604
Query: 525 APPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 581
P + ++ K E+PDVWI P S+++S+ + T +S+ F+ ++LRFPR ++
Sbjct: 605 PPTEYIELGGGEKLQYEKPDVWIR-PSDSVVISVKAASIT-QSDQFAMGWTLRFPRFRKL 662
Query: 582 RYDKPWHDCLDVQSF 596
R D+ W LD+ F
Sbjct: 663 RLDRAWDSALDMDEF 677
>gi|342889579|gb|EGU88617.1| hypothetical protein FOXB_00866 [Fusarium oxysporum Fo5176]
Length = 984
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 215/698 (30%), Positives = 348/698 (49%), Gaps = 82/698 (11%)
Query: 16 FNWIQKTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANC 73
F + K P ++R +F+ + V D++ ALRLILP DR+RG YGLKE+ +
Sbjct: 70 FRGVNKLSPHEQRRHIIERFITRWRKEVGPDFYPALRLILPDKDRDRGVYGLKENTIGKL 129
Query: 74 LIDALGMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKEL 129
L+ + + K+S D L++W+ G A+ AG+F EV+ +R G +TI E+
Sbjct: 130 LVKLMKIDKNSEDGYNLLHWKLPGQTTASRLAGDFAGRCFEVISKRPMRTDVGNMTIAEV 189
Query: 130 NDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDA 189
N+ LD+LA+S +E + V T + N++E+ W+I I+LK +K+G +EK+ +HPD
Sbjct: 190 NEQLDKLAASTGESENLRVFETFYNRMNSEELMWLIRIVLKQMKVGATEKTFLDLWHPDG 249
Query: 190 EDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLAMRIGDAHAAWRKL----- 242
+ LF+V+ L+ VC +L D R ++++ V + +PQLA A+++K+
Sbjct: 250 DALFSVSSSLRRVCWELHDPETRLEQEETGVALMQCFQPQLAQ--FQMPASFQKMIELLR 307
Query: 243 ---HGKEVVIECKFDGDRIQI-------HKNGSEIHYFSRSFLDHSE-YGHAMSKIIEQN 291
E IE K DG+R+Q+ H G ++SR D++ YG + E +
Sbjct: 308 PTEEDPEFWIEEKLDGERMQVHMVQDKSHPGGKRFCFWSRKAKDYTYLYGDGLQD--ENS 365
Query: 292 VL-----------VDRCILDGEMLVWDTSLNRFAEFGSNQEIA----KAARDGLSSDRQL 336
L V ILDGEM+ WD +++ FG+ + A K D S+ +
Sbjct: 366 SLTRHLKNAFASGVKNLILDGEMITWDMGVDKIVPFGTLKTAALSEQKNKSDTDSAGHRP 425
Query: 337 CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
+ FD+LY+ + + +L++RH L+K +KP RLE H +
Sbjct: 426 LFRVFDILYLNNKPLTQYTLRDRHRALEKAIKPVHRRLEI----HSFDK----------- 470
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 455
A + D +E +E + N EG+VLK+ S + R+ WLK+KPEY+ G LD +
Sbjct: 471 --ATSADAIEPLLREVVANASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCV 528
Query: 456 IIGGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 512
IIGGYYGSG+RGG ++ FL L P + SF +VG G E+ + +
Sbjct: 529 IIGGYYGSGKRGGMLSSFLCGLRVTQNHIQAGANPEKCFSFFKVGGGFRAEDYAEIRHRT 588
Query: 513 KPYFRKYEYPKRAPPSFYQVTNNSK----ERPDVWIESPEKSIILSITSDIRTIRSEVFS 568
+ + E+ ++ PPS Y + ERPDVWI K ++ S+ F+
Sbjct: 589 EGKW--IEWDQKNPPSKYIELGGGELRQYERPDVWIRP--KDSVVVSVKAASVGPSDQFA 644
Query: 569 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSR 628
++LRFPR R+R D+ W L ++ F EL + ++ KE +D+ R +
Sbjct: 645 RGFTLRFPRFRRLRLDRTWDTALSLEEFQELKERVD---EESKEKAMTVEDRK---RRNP 698
Query: 629 KGEKKNVSIVPSHFLQTDVSDIKGE-TSIFSDMVFCIL 665
K K+ ++I V++ KGE T++F + FC+L
Sbjct: 699 KRVKRELTIAGE---DATVAEFKGEMTNLFEGLDFCVL 733
>gi|452846225|gb|EME48158.1| hypothetical protein DOTSEDRAFT_60502 [Dothistroma septosporum
NZE10]
Length = 963
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 200/684 (29%), Positives = 346/684 (50%), Gaps = 65/684 (9%)
Query: 21 KTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDAL 78
+ P +RS +F+ + V D + A RLI+P DR+RG YGLKE L L+ L
Sbjct: 63 RNSPNEIRRSIIDRFISRWRKEVGNDIYPAFRLIVPEKDRDRGMYGLKEMTLGKILVRVL 122
Query: 79 GMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRR-QGMISGGLTIKELNDLLD 134
++KDS D +++W+ G ++ AG+F +V+ +R G +TI E+N+LLD
Sbjct: 123 KINKDSEDGYNMLHWKLPGQKSSSATAGDFAGRCFDVISKRPMRQTPGDMTIAEVNELLD 182
Query: 135 RLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFN 194
RL+ ++ + ++ K+ NA+E+ W+I +IL+ +K+G +EK+ F +HPDAE+LFN
Sbjct: 183 RLSVAQKEENQRPIIEEFYKRMNAEELLWLIRMILRQMKVGATEKTFFDIWHPDAENLFN 242
Query: 195 VTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLA---MRIGDAHAAWRKLHGKEVV- 248
++ LK VC +L D + + + D I + + +PQLA MR + A ++ V
Sbjct: 243 ISSSLKRVCWELYDPDVKLEGDDCGISLMQCFQPQLAAFQMRSMEQMVAKMNPTEEDSVF 302
Query: 249 -IECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNV 292
IE K DG+R+Q+H GS +++SR D++ YG+ A+++ I
Sbjct: 303 WIEEKLDGERMQMHMIEDEDVSGGSRFNFWSRKAKDYTYLYGNGFEDDNAALTRHIRDAF 362
Query: 293 --LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYF-AFDVLYVGDT 349
V ILDGEM+ WD + FG+ + A + SD F FD LY+ D
Sbjct: 363 GEGVRNIILDGEMITWDMKEDCIVGFGTLKTAALDQQQNPFSDGHRPLFKVFDCLYLNDM 422
Query: 350 SVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFF 409
++ +L++R + L V K RLE + S E+E
Sbjct: 423 NLTRYTLRDRRKALNASVTSVKRRLELHEYEEATQSA-----------------EIEPIL 465
Query: 410 KETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGG 468
++ I EG+VLK+ S++ +R+ W+K+KPEY+ G LD +++GGYYG+G+RGG
Sbjct: 466 RQVIAEASEGLVLKNPRSQYRLNERNDDWIKVKPEYMTEFGESLDCVVVGGYYGTGKRGG 525
Query: 469 EVAQFLVALAERPA-----PDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
++ F+ L D+ P++ SF +VG G S + + + + K++ K
Sbjct: 526 GLSSFMCGLKLSAQHFQVFSDSNPQKTYSFFKVGGGFSANDYAEIRHRTDGKWIKWD-KK 584
Query: 524 RAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 581
+ P + ++ + E+PDVWI+ PE S+++S+ + + ++ F +LRFPR ++
Sbjct: 585 KPPTDWIELGGGDRQYEKPDVWIK-PEDSVVISVKA-AQVGGTDQFRVGLTLRFPRFKKL 642
Query: 582 RYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSH 641
R DK W L + F+ L + + + K + D+ ++ R++ G++K ++
Sbjct: 643 RTDKDWTQALGIDEFITLKNEAEEAMNEKK----FKVDEARKQRTN--GKRKRALVIQGQ 696
Query: 642 FLQTDVSDIKGETSIFSDMVFCIL 665
T T +F + F ++
Sbjct: 697 DDNTTTPYAGPATKMFEGLSFFVM 720
>gi|118372223|ref|XP_001019308.1| DNA ligase IV [Tetrahymena thermophila]
gi|89301075|gb|EAR99063.1| DNA ligase IV [Tetrahymena thermophila SB210]
Length = 1026
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 206/708 (29%), Positives = 353/708 (49%), Gaps = 77/708 (10%)
Query: 5 EETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTY-----CDSVDYFSALRLILPSLDRE 59
E+T LV +N +Q++K +K+ ++F+D+ C S F+ LRLI+P D++
Sbjct: 106 EKTLFSFLVKFYNQVQQSKKGQRKKF-VQRFIDSTFKTNRCPSYT-FTILRLIMPHHDKQ 163
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK--GGAAPNAGNFPMVAAEVLQRRQ 117
R +YGL LA L + +S+D +L+N+++ G+F V VLQ
Sbjct: 164 RLNYGLNYKNLAKVLSEVFALSEDKRQ--QLLNYKRPLKDNQQVVGDFGEVVQNVLQAFT 221
Query: 118 GMISGGLTIKELNDLLDRLASSENR--AEKISVLSTLIKKTNAQEMKWIIMIILKDLKLG 175
LTI +++ LD LA +NR A K VL +K ++E+KWI +ILKDL LG
Sbjct: 222 Q--KATLTINDVDRCLDELAQPQNRDLASKEKVLRNCLKNATSEEIKWISRLILKDLNLG 279
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDI-EVGKAVRPQLAMRIGD 234
I+ + I FHPDA LFN T L VC++ D N HK ++ + ++P LA R
Sbjct: 280 INHEIILALFHPDAVVLFNSTSSLWEVCKEFVDPN--HKLSNVLRLFHPIKPMLAGR-KT 336
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNV-- 292
+ L GK ++E KFDG+RIQ H + + +F+R+ +++ M + + +++
Sbjct: 337 LKSIEAILKGKNYLVETKFDGERIQCHVSPESLMFFTRNSNNYTNIYERMIEHVRRSLKD 396
Query: 293 LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYV-----G 347
V CILDGEM+V + + +FG N+ +A D + +CY FD+LY+
Sbjct: 397 AVHSCILDGEMVVVNKITGQRVQFGLNKTVAMERED---DELCICYKIFDILYLKTKDNK 453
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ ++ +L+ R ++L+ ++ + R+E + + +++++
Sbjct: 454 EYALTEYTLQYRKKILENLIDNQQDRVEVI-----------------FGREYSDINDILT 496
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGS--- 463
F E I DEGIV+K L + + P DRS KW+K+K +Y D LD+++IGGY+G
Sbjct: 497 EFNEAIHRNDEGIVIKQLDTLYYPDDRSDKWIKMKGDYYEGIIDTLDLIVIGGYFGEKSY 556
Query: 464 -----GRRGGEVAQFLVALAER-PAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 517
G + +LVA+A++ + + F +VG G + + + +++ +
Sbjct: 557 KINGIGDWTDHITHYLVAVAKKIDLQNPSNSILVPFAKVGAGFTARDYADIKARMRDQWV 616
Query: 518 KYEYPKRAPPSFYQVTN-NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 576
+ + + P Q K++PD +I SP+ S+IL I + I+S + Y+LRFP
Sbjct: 617 RTNHSNKTPSFIIQNWKPGEKDKPDAYILSPQNSLILEIRA-TEIIQSSQYPTNYTLRFP 675
Query: 577 RIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPK-------------- 622
R ++ R DK W DC+ +E+ + QK + D+ +
Sbjct: 676 RFEKFRRDKDWFDCMKFNEIIEMTQNLKKKEQKESDKEDNASDEEQDENGGKLKKKRKGQ 735
Query: 623 ---QFRSSRKGEKKN--VSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ +R+G K N + V + +L DVSD+K E++IF++ VF I+
Sbjct: 736 NGEEIEVNRQGRKPNWKTNKVMAQYLDIDVSDVKVESNIFNNFVFNII 783
>gi|403419578|emb|CCM06278.1| predicted protein [Fibroporia radiculosa]
Length = 1019
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 213/689 (30%), Positives = 352/689 (51%), Gaps = 90/689 (13%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVL 70
VL +LF+ +Q +K K RK LD++ + DRER YGLKE L
Sbjct: 42 VLAALFDKLQN----ERKPEKRRKLLDSWFNK--------------DRERAVYGLKEKNL 83
Query: 71 ANCLIDALGMSKDSADAVRLINWRKGGA-APNAGNFPMVAAEVLQRRQGMISGGLTIKEL 129
A I + + DA+RL+NW+K ++G+FP V EV+ +R +I G LTI E+
Sbjct: 84 AKTYIKLIPLGPRDPDAIRLLNWKKPTEREKSSGDFPTVLYEVISKRSSVIEGTLTIDEV 143
Query: 130 NDLLDRLASSENRAEKIS-VLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPD 188
ND+LD L+ + +++ S +L + ++ +E +WI+ I+LKD+ + + E ++F FHPD
Sbjct: 144 NDVLDELSRNMGKSDVQSRLLQRVYNRSTPEEQRWIVRIVLKDMIISVKETTVFSVFHPD 203
Query: 189 AEDLFNVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMR-IGDAHAAWRKLHGK 245
A DLFN DLK + +L D N+R +D +++ +A P L R + R++ G+
Sbjct: 204 AHDLFNTCSDLKKIAWELWDPNRRLNEEDKGVQLFRAFAPMLCKRPTRKIEDSVREMQGR 263
Query: 246 EVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKIIEQ--NVLVDRC 297
++E K DG+R+Q+HK G+E Y SR D++ YG +++ I ++ VD
Sbjct: 264 TFIVEEKLDGERMQLHKRGNEYFYCSRKGKDYTYLYGKHVGMGSLTPYIHSAFDLRVDEI 323
Query: 298 ILDGEMLVWDTSLNRFAEFGSNQEIA--KAARDGLSSDRQLCYFAFDVLYVGDTSVIHQS 355
+LDGEMLVWD R FG+ + A K+ RD + + C+ FD+LY+ S++ +S
Sbjct: 324 VLDGEMLVWDPVSERNLPFGTLKTAALDKSKRD---YNPRPCFKVFDLLYLNGMSLLQKS 380
Query: 356 LKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN 415
LK R L+ +K GR+E V G +V + + I +
Sbjct: 381 LKFRKRNLRACLKEVSGRIEYAVEYEG-----------------RTAKDVRERMNDIIAS 423
Query: 416 RDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIG---------------- 458
R EG+VLK S++ R+ W+K+KPEY+ G +DVL++G
Sbjct: 424 RGEGLVLKHPDSEYVLNGRNRDWIKVKPEYMDNMGETVDVLVVGWSNCCSTNLFATNSKK 483
Query: 459 -GYYGSGRRGGEVAQFLVA-LAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 516
G YG+GRR G V+ + A L +R D ++ +F R+G+GLS D + + + +
Sbjct: 484 AGNYGTGRRAGGVSTLICAVLDDRHPEDDDESKYSTFVRIGSGLS--YADYIWVRQRSW- 540
Query: 517 RKYEYPKRAPPSFYQVTNNSKE-RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 575
+ + PPSF V+ +E + DV++E PE S I+ + + + S+ + ++RF
Sbjct: 541 --KTWDLKNPPSFLHVSKRGQEDKGDVYLE-PEDSFIIKVKA-AEIVTSDQYHMGLTMRF 596
Query: 576 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNV 635
PR ++R D DC+ + +E + S QK K L+DD K + ++ K +
Sbjct: 597 PRALKIRDDLDVSDCMRASAVLEGLRSE----QKRK----LEDDDGKPKKKQKR-TAKKI 647
Query: 636 SIVPSHFLQTDVSDIKGETSIFSDMVFCI 664
S++P + V +++ ET + M F +
Sbjct: 648 SLMP-EYQGIKVKNVEIETDLLEGMKFMV 675
>gi|451847165|gb|EMD60473.1| hypothetical protein COCSADRAFT_243297 [Cochliobolus sativus
ND90Pr]
Length = 994
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 194/623 (31%), Positives = 312/623 (50%), Gaps = 69/623 (11%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P KR+ +F+ + V D++ A+RLI+P DR+R YGLKE +A LI +
Sbjct: 80 PHEAKRNIVERFIANWRKQVGNDFYPAMRLIIPEKDRDRAMYGLKEKAIAKVLIKLTRIG 139
Query: 82 KDSADAVRLINWR-----KGGAAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDR 135
KDS DA ++NW+ + +A AG+F E+L RQ ++I E+N+ LD+
Sbjct: 140 KDSDDAKHMLNWKLPSQLQKASAWTAGDFAGRCYEILSSRQLKTEYSDMSIAEVNNALDK 199
Query: 136 LASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNV 195
L+ E++ + ++ NA+EM W+I +IL+ +K+G +EK++ +HPDAE LFNV
Sbjct: 200 LSQVGTEEEQVKIFQRFYRRMNAEEMTWLIRMILRQMKIGATEKTLLDIWHPDAETLFNV 259
Query: 196 TCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAM---RIGDAHAAWRKLHGKE---- 246
+ +L+ VC +L D N R + ++ + + + +PQLA ++G + G
Sbjct: 260 SSNLRRVCWELFDHNIRLEGENTGLCLMQCFQPQLAQFQDKVGSFQKMVNRFKGDSDEDT 319
Query: 247 VVIECKFDGDRIQIH-------KNGSEIHYFSRSFLD---------HSEYGHAMSKIIEQ 290
IE K DG+R+Q+H G ++SR D H + A+++ I
Sbjct: 320 FWIEEKLDGERMQLHMVEDPDAPGGKSFGFWSRKAKDYTYLYGKHFHGDAAGALTRFITD 379
Query: 291 NV--LVDRCILDGEMLVWDTSLNRFAEFGSNQEIA---KAARDGLSSDRQLCYFAFDVLY 345
V ILDGEM+ WD + FG+ + A K + + ++ + FD +Y
Sbjct: 380 AFGKNVKNIILDGEMVTWDMETDHIVGFGTLKTAAISEKENKTNQETGQRPLFRVFDCVY 439
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
+ DT + +L++R L+ VK RLE V P E A + E+
Sbjct: 440 LNDTLLTQYTLRDRRRALESAVKGVHRRLE-----------VHPYIE------ARSHTEI 482
Query: 406 EKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSG 464
E ++ + EG+VLK+ S + R+ W+K+KPEY+ G LD +++GGY+GSG
Sbjct: 483 EPALRKVVAEASEGLVLKNPRSMYCLNQRNNDWMKVKPEYMSEFGESLDCIVVGGYFGSG 542
Query: 465 RRGGEVAQFLVAL----AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
RRGG + FL AL + +P D SF +VG G S ++ A+ + + + ++
Sbjct: 543 RRGGAHSSFLCALLTNKSAKPG-DPKHEHCWSFFKVGGGFSSDDYAALRGRTQGKW--HD 599
Query: 521 YPKRAPPSFYQV----TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 576
+ R PP F ++ N ERPD WI P S++L + S+ F +LRFP
Sbjct: 600 WDPRRPPPFIELGGHEQNRQHERPDQWIR-PSDSVVLECKA-ASVESSDKFRFALTLRFP 657
Query: 577 RIDRVRYDKPWHDCLDVQSFVEL 599
R ++R DK W L VQ F+E+
Sbjct: 658 RFKQLRTDKRWDQALSVQEFLEV 680
>gi|189207961|ref|XP_001940314.1| DNA ligase 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187976407|gb|EDU43033.1| DNA ligase 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 988
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 205/689 (29%), Positives = 343/689 (49%), Gaps = 75/689 (10%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P KR+ +F+ + V D++ A+RLI+P DR+R YGLKE +A LI +
Sbjct: 80 PHEAKRNIIERFIANWRKQVGNDFYPAMRLIIPEKDRDRPMYGLKEKAIAKVLIKLTRIG 139
Query: 82 KDSADAVRLINWRKGG-----AAPNAGNFPMVAAEVLQRRQ-GMISGGLTIKELNDLLDR 135
KDS DA ++NW+ G +A AG+F E+L RQ + +TI E+N+ LD+
Sbjct: 140 KDSDDAKHMLNWKLPGQLNKASASTAGDFAGRCYEILSTRQLKTVYSDMTIAEVNNALDK 199
Query: 136 LASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNV 195
L+ E++ + ++ NA+EM W+I +IL+ +K+G +EK+ +HPDAE LFN+
Sbjct: 200 LSQVGAEDEQVKIFQRFYRRMNAEEMTWLIRMILRQMKIGATEKTFLDIWHPDAETLFNI 259
Query: 196 TCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAM---RIGDAHAAWRKLHGKE---- 246
+ +L+ VC +L D R + +D + + + +PQLA ++G + G E
Sbjct: 260 SSNLRRVCWELFDTKLRLEGEDTGLSLMQCFQPQLAQFQDKVGSFEKLVTRFKGDENDDT 319
Query: 247 VVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH--------AMSKIIEQ 290
IE K DG+R+Q+H G ++SR D++ YG A+++ I
Sbjct: 320 FWIEEKLDGERMQLHMMEDPDAPGGKSFGFWSRKAKDYAYLYGRHFDGDEAGALTRFITD 379
Query: 291 NV--LVDRCILDGEMLVWDTSLNRFAEFGSNQEIA---KAARDGLSSDRQLCYFAFDVLY 345
V ILDGEM+ WD + FG+ + A K + ++ ++ + FD +Y
Sbjct: 380 AFGENVRNIILDGEMITWDMETDHIVGFGTLKTAALSEKENKTNKNTGQRPLFRVFDCVY 439
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
+ D + +L++R L+ VK RLE V P E A + E+
Sbjct: 440 LNDKLLTQYTLRDRRRALESAVKGVPRRLE-----------VHPYIE------ARSHTEI 482
Query: 406 EKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSG 464
E ++ I EG+VLK+ S + R+ W+K+KPEY+ G LD +++GGY+GSG
Sbjct: 483 EPALRKVIAESSEGLVLKNPRSMYCLSQRNNDWMKVKPEYMSEFGESLDCVVVGGYFGSG 542
Query: 465 RRGGEVAQFLVALA----ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
RGG + FL AL +P Y + SF +VG G S E+ A+ + + + ++
Sbjct: 543 HRGGVHSSFLCALLTDKDAKPGDPKYEHCW-SFFKVGGGFSREDYAAIRGRTEGKWHNWD 601
Query: 521 YPKRAPPSFYQV----TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 576
+R PP F ++ N ERPD WI P +S++L + S+ F + +LRFP
Sbjct: 602 --RRRPPLFIELGGHEQNRQHERPDQWIR-PSESVVLECKA-ASVESSDKFRSTLTLRFP 657
Query: 577 RIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVS 636
R +R DK W L VQ F+++ + + ++ ++ + K+ R++ KK ++
Sbjct: 658 RFKLLRVDKRWDQALSVQEFLDVKSRAEKEKSEKEKEFKIEQSRRKKARTA----KKPLT 713
Query: 637 IVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+V ++T + + +F + F I+
Sbjct: 714 VVSDDAIKTPYAGPA--SKVFEGLAFYIM 740
>gi|405119312|gb|AFR94085.1| DNA ligase 4 [Cryptococcus neoformans var. grubii H99]
Length = 1069
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 205/669 (30%), Positives = 341/669 (50%), Gaps = 82/669 (12%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK--GGAAPN 101
D + +RL+LP DRER Y LKES+LA C ID L + K S A RLI W++ G ++
Sbjct: 81 DLYPLIRLLLPDRDRERPVYNLKESMLARCYIDILSLEKHSEAAQRLIKWKQPAGDSSNP 140
Query: 102 AGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEK-ISVLSTLIKKTNAQE 160
G+F V ++ R + G L+++ +N LLD+LA + + + + +L + + A+E
Sbjct: 141 TGDFAKVCYNEIKARSTVEEGQLSVEAVNMLLDKLAVGKMKQQDYVPILKAINMQCTAEE 200
Query: 161 MKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD--I 218
+WII IILKDL + I E+ + FHPDA DL+NV DLK VC L D R + + +
Sbjct: 201 QEWIIRIILKDLHISIRERGVLSAFHPDAIDLYNVCSDLKRVCWTLYDPGFRLNKNETHL 260
Query: 219 EVGKAVRPQLAMRIGDA---HAAWRKLHGKEVVIECKFDGDRIQIHK--NGSEIHYFSRS 273
E+ + PQL R+ DA + A KE ++E K DG+RIQ+H NG++ Y SR
Sbjct: 261 ELFHSFLPQLCGRMNDATLENIAKAIGAPKEFIMEEKLDGERIQLHMRGNGAQWFYCSRK 320
Query: 274 FLDHSE-YGH-----AMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA 325
D++ YG ++++ I V ILDGEM+VWD + R+ FG+ + A
Sbjct: 321 AKDYTYLYGAHPGEGSLTRYIATAFQDNVRNVILDGEMMVWDPVVERYLAFGTLKSAALV 380
Query: 326 ARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQ-----KVVKPSKGRLETLVPD 380
FD+L++ D + + L ER LL+ K ++ KGRLE +
Sbjct: 381 K-------------VFDILFLNDHCLSRKRLSERKRLLRSGKIFKDIENYKGRLEFVDEK 427
Query: 381 HGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLK 440
G + ++ + + +E + EG+V+K ++ R W+K
Sbjct: 428 RG-----------------KSAKDIRDYLERVVETKGEGLVVKKTDVIYQTNSRGYDWIK 470
Query: 441 LKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRR--FISFCRVG 497
+KPEY + G +L+VL++GG++G G R G++++ L L E+ D + F +FC +G
Sbjct: 471 VKPEYSDQMGENLEVLVLGGWWGKGGRSGKISRLLCGLREQAFDDGTVEKPSFKTFCSIG 530
Query: 498 TGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN-NSKERPDVWIESPEKSIILSIT 556
+G+S + + ++ K K +++ ++ + PP F ++ + ++PDV+IE PE S ++ +
Sbjct: 531 SGMSYSDYEWILNKHKMHWKPFD--RSNPPPFMKLGSVGLDDKPDVYIE-PENSFVIEVK 587
Query: 557 SDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHD-CLDVQSFVELVHSSNGTTQKGKEYGG 615
+ + + + ++LRFPR + YDK D LD +S + +S K + + G
Sbjct: 588 A-AEIVPAGGYGIGFTLRFPRCKYIYYDKNSRDYALDDESKERDMWTSMSVDGKSRIFHG 646
Query: 616 LQD-----------DKPKQFRSSRKG---------EKKNVSIVPSHFLQTDVSDIKGETS 655
+++ +PK+ +G + + + S+F +SD ETS
Sbjct: 647 IRELTERVDFLDLFSRPKRSYDDSQGPRKKKKRKVVRSKKNHLISNFRGQKLSDADVETS 706
Query: 656 IFSDMVFCI 664
IFSDM F I
Sbjct: 707 IFSDMTFYI 715
>gi|307104638|gb|EFN52891.1| hypothetical protein CHLNCDRAFT_138420 [Chlorella variabilis]
Length = 1063
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 214/638 (33%), Positives = 326/638 (51%), Gaps = 94/638 (14%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFR-----KFLDTYCD--SVDYFSALRLILPS-------- 55
LV+ F+ +K A+K R +F+D D S F+ RLILP+
Sbjct: 12 TLVNFFSSCRKLLGNARKGGDVRSQHVKRFIDVNIDKESHQAFAVFRLILPAVGAGSAVL 71
Query: 56 LDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQR 115
LD +RG+Y L ES L N L+ A G+ K S +A + NW++ G+ +AG+F V E +
Sbjct: 72 LDNKRGNYKLLESNLINVLLKAAGIDKKSKEASTIRNWKRPGSK-SAGDFAAVLQENIFN 130
Query: 116 RQGMIS--------GGLTIKELNDLLDRLA-SSENRAEKISVLSTLIKKTNAQEMKWIIM 166
MI L + +LN LD+L ++ N E+ ++L L++ T+ +M WI+
Sbjct: 131 VYCMIDPTDGTGRLKTLKVGQLNQALDKLVEAAGNFNEQANILRGLMQVTSPDQMAWIVQ 190
Query: 167 IILKDLKLGISEKSIFHEFHPDAEDLFNVT-CDLKLVCEKLKDRNQRHKRQDIEVGKAVR 225
IILK+LK+ + E + +H DAE +N + DL+ + ++ ++ + I+ GKAVR
Sbjct: 191 IILKNLKINVGEGKVLKTWHKDAETYYNQSGMDLEHIFNEMVATSENYA-TSIQPGKAVR 249
Query: 226 PQLAMRIGDAHAAWRK-LHG-----KEVVIECKFDGDRIQIHKNG-SEIHYFSRSFLDHS 278
PQL G A+ K +H KE V+E K DG+RIQ+H+ EI YFSR ++H
Sbjct: 250 PQLLKMTGSVKWAFSKAMHDEDGKLKEFVVEMKLDGERIQVHRGPRDEISYFSRRAIEHG 309
Query: 279 E-YGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGS------------------- 318
E +++ + + C+LDGE++VW+ F FGS
Sbjct: 310 EKSNYSVVDDMIRRYTRGPCVLDGELIVWNKKEQVFEPFGSLKPLISAILEQKHRGDVLD 369
Query: 319 ----------NQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVK 368
+ E KA + G D +L Y FD+L+ G VI L+ERH++L+ V
Sbjct: 370 FNEMEEDAAIHDEDYKAPQIG---DLELVYVTFDILHNGKGGVIDMPLRERHKMLEDKVV 426
Query: 369 PSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK 428
P G+ + G S +++ + +E + R+EGIV+K L S
Sbjct: 427 P------------GIPADRTHFGSILASRTGRTEEDISQMLQEIVRLREEGIVIKALDSV 474
Query: 429 WEPGDR-SGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYP 487
W DR S WLK+KP+YI A +LD L+IG + G G RGG Q+L+ALA+ P
Sbjct: 475 WVSNDRHSNNWLKVKPDYI-ANIELDCLVIGAWGGKGGRGGHYTQYLLALADDPPAGQ-- 531
Query: 488 RRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESP 547
+VGTG E +AV +++P + K PP FY VT +E+P+VWI P
Sbjct: 532 -------QVGTGTDRSEWEAVHRQIEPLC--IDASKHPPPCFYSVT--GREKPEVWISDP 580
Query: 548 EKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
++S+++ I++D+RTIRS F YSLRFP++ VR+DK
Sbjct: 581 KESVVVQISADLRTIRSTQFKTGYSLRFPKVHSVRWDK 618
>gi|358375799|dbj|GAA92375.1| DNA ligase [Aspergillus kawachii IFO 4308]
Length = 1009
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 197/631 (31%), Positives = 326/631 (51%), Gaps = 65/631 (10%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P K+R +F+ + V D + A RLILP DR+R YG+KE + L+ + +
Sbjct: 82 PHEKRRDVIERFISRWRKEVGDDIYPAFRLILPDKDRDRAMYGIKEKAIGKLLVKIMKID 141
Query: 82 KDSADAVRLINWRKGGAAPN----AGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRL 136
K+S D L+NW+ G AG+F +V+ +R G ++I+E+ND LD+L
Sbjct: 142 KNSEDGFNLLNWKLPGQLATSRFMAGDFARRCYDVISKRPMRTEVGNMSIEEVNDKLDQL 201
Query: 137 ASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVT 196
+++ +++ +LS ++ N +EM W+I IIL+ +K+G +E+++F+ +HPDA +L++++
Sbjct: 202 SNASKEDQQLPILSEFYRRMNPEEMLWLIRIILRQMKVGATERTLFNVWHPDAANLYSIS 261
Query: 197 CDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLA---MRIGDAHAAWRKLHGKE----V 247
L+ VC +L D N R ++ I + + +PQLA M+ D A ++ G E
Sbjct: 262 SSLRRVCWELHDPNIRLGAENSGISLMQCFQPQLAQFQMQSFDRMIA--RMRGTEEDPVF 319
Query: 248 VIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNV 292
IE K DG+R+Q+H G ++SR D++ YG A+++ ++
Sbjct: 320 WIEEKLDGERMQLHMQSDSSVPGGRRFRFWSRKAKDYTYLYGKSLEDPNGALARHLKDAF 379
Query: 293 L--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYFAFDVLYVGDT 349
V+ ILDGEM+ W+ FG+ + A A R+ S+ + + FD+L++
Sbjct: 380 ADGVNSLILDGEMIAWNPEQGAPEPFGTLKTAALAEQRNPFSNGSRPLFRVFDLLFLNGH 439
Query: 350 SVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFF 409
+ +L++R LQK VK R E V P E A + ++E
Sbjct: 440 DLTRYTLRDRRNALQKSVKSVHRRFE-----------VHPYEE------AIDKTQIEAAL 482
Query: 410 KETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGG 468
+ + EG+VLK+ S + +R W+K+KPEY+ G LD+++IGGYYGSG RGG
Sbjct: 483 RRVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVIGGYYGSGHRGG 542
Query: 469 EVAQFLVAL----AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 524
+A FL L A +T + + SFC+VG G + + + + + PK
Sbjct: 543 GLASFLCGLRVDNASSSQGNTSTKCY-SFCKVGGGFTAADYANIRHHTDGKWMDWN-PKN 600
Query: 525 APPSFYQVT--NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVR 582
P ++ ++ N ERPD WI+ PE S++L + + +I S+ F +LRFPR R+R
Sbjct: 601 PPTAYIELAGGNAQHERPDQWIK-PEDSVVLCVKAASVSI-SDQFRVGLTLRFPRFKRLR 658
Query: 583 YDKPWHDCLDVQSFVELVHSSNGTTQKGKEY 613
DK W L +Q F++L S+ QK KE+
Sbjct: 659 MDKDWKSALSMQEFLDL-KSNVEQEQKEKEF 688
>gi|341603861|dbj|BAK53401.1| DNA ligase IV [Aspergillus luchuensis]
Length = 1111
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 197/631 (31%), Positives = 326/631 (51%), Gaps = 65/631 (10%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P K+R +F+ + V D + A RLILP DR+R YG+KE + L+ + +
Sbjct: 82 PHEKRRDVIERFISRWRKEVGDDIYPAFRLILPDKDRDRAMYGIKEKAIGKLLVKIMKID 141
Query: 82 KDSADAVRLINWRKGGAAPN----AGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRL 136
K+S D L+NW+ G AG+F +V+ +R G ++I+E+ND LD+L
Sbjct: 142 KNSEDGFNLLNWKLPGQLATSRFMAGDFARRCYDVISKRPMRTEVGNMSIEEVNDKLDQL 201
Query: 137 ASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVT 196
+++ +++ +LS ++ N +EM W+I IIL+ +K+G +E+++F+ +HPDA +L++++
Sbjct: 202 SNASKEDQQLPILSEFYRRMNPEEMLWLIRIILRQMKVGATERTLFNVWHPDAANLYSIS 261
Query: 197 CDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLA---MRIGDAHAAWRKLHGKE----V 247
L+ VC +L D N R ++ I + + +PQLA M+ D A ++ G E
Sbjct: 262 SSLRRVCWELHDPNIRLGAENSGISLMQCFQPQLAQFQMQSFDRMIA--RMRGTEEDPVF 319
Query: 248 VIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNV 292
IE K DG+R+Q+H G ++SR D++ YG A+++ ++
Sbjct: 320 WIEEKLDGERMQLHMQSDSSVPGGRRFRFWSRKAKDYTYLYGKSLEDPNGALARHLKDAF 379
Query: 293 L--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYFAFDVLYVGDT 349
V+ ILDGEM+ W+ FG+ + A A R+ S+ + + FD+L++
Sbjct: 380 ADGVNSLILDGEMIAWNPEQGAPEPFGTLKTAALAEQRNPFSNGSRPLFRVFDLLFLNGH 439
Query: 350 SVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFF 409
+ +L++R LQK VK R E V P E A + ++E
Sbjct: 440 DLTRYTLRDRRNALQKSVKSVHRRFE-----------VHPYEE------AIDKTQIEAAL 482
Query: 410 KETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGG 468
+ + EG+VLK+ S + +R W+K+KPEY+ G LD+++IGGYYGSG RGG
Sbjct: 483 RRVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVIGGYYGSGHRGG 542
Query: 469 EVAQFLVAL----AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 524
+A FL L A +T + + SFC+VG G + + + + + PK
Sbjct: 543 GLASFLCGLRVDNASSSQGNTSTKCY-SFCKVGGGFTAADYANIRHHTDGKWMDWN-PKN 600
Query: 525 APPSFYQVT--NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVR 582
P ++ ++ N ERPD WI+ PE S++L + + +I S+ F +LRFPR R+R
Sbjct: 601 PPTAYIELAGGNAQHERPDQWIK-PEDSVVLCVKAASVSI-SDQFRVGLTLRFPRFKRLR 658
Query: 583 YDKPWHDCLDVQSFVELVHSSNGTTQKGKEY 613
DK W L +Q F++L S+ QK KE+
Sbjct: 659 MDKDWKSALSMQEFLDL-KSNVEQEQKEKEF 688
>gi|451997909|gb|EMD90374.1| hypothetical protein COCHEDRAFT_1179075 [Cochliobolus
heterostrophus C5]
Length = 992
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 200/689 (29%), Positives = 340/689 (49%), Gaps = 75/689 (10%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P KR+ +F+ + V D++ A+RLI+P DR+R YGLKE +A LI +
Sbjct: 80 PHEAKRNIVERFIANWRKQVGNDFYPAMRLIIPEKDRDRAMYGLKEKAIAKVLIKLTRIG 139
Query: 82 KDSADAVRLINWR-----KGGAAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDR 135
KDS DA ++NW+ + +A AG+F E+L RQ ++I E+N+ LD+
Sbjct: 140 KDSDDAKHMLNWKLPSQMQKASAWTAGDFAGRCYEILSSRQLKTEYSDMSIAEVNNALDK 199
Query: 136 LASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNV 195
L+ E++ + ++ NA+EM W+I +IL+ +K+G +EK++ +HPDAE LFNV
Sbjct: 200 LSQVGTEEEQVKIFQRFYRRMNAEEMTWLIRMILRQMKIGATEKTLLDIWHPDAETLFNV 259
Query: 196 TCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAM---RIGDAHAAWRKLHGKE---- 246
+ +L+ VC +L D R + ++ + + + +PQLA ++G + G
Sbjct: 260 SSNLRRVCWELFDHKIRLEGENTGLSLMQCFQPQLAQFQDKVGSFQKMVTRFKGDSDDDT 319
Query: 247 VVIECKFDGDRIQIH-------KNGSEIHYFSRSFLD---------HSEYGHAMSKIIEQ 290
IE K DG+R+Q+H G ++SR D H + A+++ +
Sbjct: 320 FWIEEKLDGERMQLHMVEDPDAPGGKSFGFWSRKAKDYTYLYGKHFHGDEAGALTRFVTD 379
Query: 291 NV--LVDRCILDGEMLVWDTSLNRFAEFGSNQEIA---KAARDGLSSDRQLCYFAFDVLY 345
V ILDGEM+ WD + FG+ + A K + + ++ + FD +Y
Sbjct: 380 AFGKNVRNIILDGEMVTWDMETDHIVGFGTLKTAAISEKENKTNQETGQRPLFRVFDCMY 439
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
+ DT + +L++R L+ VK RLE V P E A + E+
Sbjct: 440 LNDTLLTQYTLRDRRRALESAVKGVHRRLE-----------VHPYIE------ARSHTEI 482
Query: 406 EKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSG 464
E ++ + EG+VLK+ S + R+ W+K+KPEY+ G LD +++GGY+GSG
Sbjct: 483 EPALRKVVAEASEGLVLKNPRSMYCLNQRNNDWMKVKPEYMSEFGESLDCIVVGGYFGSG 542
Query: 465 RRGGEVAQFLVAL----AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
RRGG + FL AL + +P D SF +VG G S ++ A+ + + + ++
Sbjct: 543 RRGGAHSSFLCALLTNKSAKPG-DLKHEHCWSFFKVGGGFSSDDYAALRGRTQGKW--HD 599
Query: 521 YPKRAPPSFYQV----TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 576
+ R PP F ++ N ERPD WI + ++ S + + S+ F +LRFP
Sbjct: 600 WDPRRPPPFIELGGHEQNRQHERPDQWIRPSDSVVLECKASSVES--SDKFRFALTLRFP 657
Query: 577 RIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVS 636
R ++R DK W L VQ F+E+ + ++ ++ + K+ R+S KK ++
Sbjct: 658 RFKQLRTDKRWDQALSVQEFLEVKTKIETEKSEKEKEFKIEQSRRKKARTS----KKPLA 713
Query: 637 IVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
++ + + T + E+ IF + F ++
Sbjct: 714 VMGNDTVTTPYAG--PESKIFDGLSFYVM 740
>gi|302410543|ref|XP_003003105.1| DNA ligase [Verticillium albo-atrum VaMs.102]
gi|261358129|gb|EEY20557.1| DNA ligase [Verticillium albo-atrum VaMs.102]
Length = 944
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 200/662 (30%), Positives = 336/662 (50%), Gaps = 70/662 (10%)
Query: 21 KTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDAL 78
K P+ ++R +F+ + +V D++ A+RLILP DR+RG YGLKE+ + L+ +
Sbjct: 84 KPSPSEQRRHIIDRFISRWRKNVGHDFYPAMRLILPDKDRDRGVYGLKENAIGKLLVKLM 143
Query: 79 GMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLD 134
+ K+S D L++W+ G A+ AG+F A EVL +R I G +TI ++N+LLD
Sbjct: 144 KIDKNSEDGYNLLHWKLPGQTTASRMAGDFAGRAFEVLSKRPMRIEVGDMTIADVNELLD 203
Query: 135 RLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFN 194
+LA S E + V T ++ NA+E+ W+I IILK +K+G +EK++ H +HPDAE LFN
Sbjct: 204 KLAGSSGELENLEVFETFYERMNAEELMWLIRIILKQMKVGATEKTLLHLWHPDAETLFN 263
Query: 195 VTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECK 252
V+ L+ VC +L D R ++++ + + + +PQLA A+++K+ V
Sbjct: 264 VSSSLRRVCWELFDPQVRLEQENTGVTLMQCFQPQLAQ--FQMPASFQKM----VDYLRP 317
Query: 253 FDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNR 312
G R G+ + ++F V ILDGEM+ WD ++
Sbjct: 318 PRGSRGLKDDRGAWTRHLGKAFA----------------AGVRNIILDGEMITWDPDTDK 361
Query: 313 FAEFGSNQEIAKAARDGLSSDR--QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPS 370
+FG+ + A A + ++ + + FD+LY+ D + +L++R+ L+K V
Sbjct: 362 IMQFGTLKTAALAEQKNPYNNTGPRPLFRVFDILYLNDQPLTRYTLRDRYNALRKAVIGV 421
Query: 371 KGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWE 430
R+E V +H A + D +E ++ + EG+VLK+ S +
Sbjct: 422 HRRIE--VHEHE---------------AATSADAIEPLLRKVVAEASEGLVLKNPRSMYR 464
Query: 431 PGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVAL---AERPAPDTY 486
R+ WLK+KPEY+ G LD ++IGGYYGSG+RGG ++ +L L
Sbjct: 465 LNSRNDDWLKVKPEYMTEFGESLDCVVIGGYYGSGKRGGILSTYLCGLRVSENHIKAGAN 524
Query: 487 PRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES 546
P + S +VG G S E+ + ++ ++ PK+ P + ++ + E+PDVWI
Sbjct: 525 PEKCFSLFKVGGGFSVEDYAEIRHHTDGKWKDWD-PKKPPNEYIELAHGFAEKPDVWIRP 583
Query: 547 PEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGT 606
+ ++ + S + S+ F+ ++LRFPR ++R DK W L VQ F +L
Sbjct: 584 KDSFVLEAKASSVGP--SDQFALGFTLRFPRFRKLRKDKSWDQGLSVQEFQDLRRRVEEE 641
Query: 607 TQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIK--GETS-IFSDMVFC 663
Q ++ +++ K R + K KK + I TD + ++ GE S +F + FC
Sbjct: 642 AQ--EKTMSVENTK----RRAVKRVKKELVIA-----GTDSTPVQFEGEKSKVFEGLEFC 690
Query: 664 IL 665
+L
Sbjct: 691 VL 692
>gi|325181477|emb|CCA15911.1| DNA ligase putative [Albugo laibachii Nc14]
Length = 1435
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 224/749 (29%), Positives = 353/749 (47%), Gaps = 123/749 (16%)
Query: 13 VSLFNWIQKTKPAAKK-RSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLA 71
+S+ ++KT A K R F L D + LRL+LP LDRER +Y LKE +A
Sbjct: 383 ISVDGVVEKTPKADDKIRLIFTDSLRQQIHGTDMYPFLRLLLPQLDRER-TYNLKEKKIA 441
Query: 72 NCLIDALGMSKDS--ADAVRLINWRKGG--AAPNAGNFPMVAAEVLQRRQGMISGG---- 123
I+ LGM+ S DA RL N+ + + G+F V EVL+ R + G
Sbjct: 442 KIYINLLGMTNASRSQDASRLENYNDPTIVQSKSVGDFASVLFEVLELRAPVQRGANAQK 501
Query: 124 --LTIKELNDLLDRLAS----------------------------------------SEN 141
T++ +N+LLD L S +
Sbjct: 502 SQRTLQYVNELLDELVSGTQPNAYGAEASDEEQDPVQKHEELAVRSLDSTSVQNKQNAST 561
Query: 142 RAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKL 201
A + ++ ++ A E KW+ I+LKDLK+G+ + + HPDA +++N T DL
Sbjct: 562 SAHQRTIFFKILMNFPAVEQKWLTRILLKDLKIGLRHERVLKYIHPDAMEMYNHTNDLHR 621
Query: 202 VCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH 261
+C +L++ R+ IE + P LA R+ D +++ +E K DG+R+ H
Sbjct: 622 ICLELRNSKIRYV-PVIEPFQVFSPMLAKRV-DFGRCIQEIGTDSFGMEPKLDGERVLCH 679
Query: 262 KNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVLVD-RCILDGEMLVWDTSLNRFAEFGSN 319
G ++ + SR+ ++++E YG MS + +L D CILDGEM+VWD L RF EFG
Sbjct: 680 VQGGKVQFLSRNGINYTELYGPGMSSYVLAQLLEDIDCILDGEMMVWDNMLYRFREFGLL 739
Query: 320 QEIAKAARDGLSSDRQLCYFAFDVLYVGDT--------------SVIHQS---------- 355
+ +A + R+ S +R LCY +D++Y+G + V H++
Sbjct: 740 KNVAHSVRENESPNRWLCYVVWDLVYLGSSKSERGDQLVKELLQQVFHEAGQAQAVMGLP 799
Query: 356 LKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS---LVAHNVDEVEKFFKET 412
L R LL+K++ P R+ +N+H+ + +V VD +
Sbjct: 800 LYVRRTLLEKILTPLDHRVT-------INTHIVVNVKAAQERHDIVMAQVD-------KE 845
Query: 413 IENRDEGIVLKDLGSKWEPGDRS---GKWLKLKPEYIRAGSDLDVLIIGGYYGSG-RRGG 468
I N EG++LKDL S + G+ S +W+KLKP Y ++LDVLI+GGYYG+G RR G
Sbjct: 846 ITNGGEGLILKDLNSHYMCGEASRATRRWIKLKPNYAEITTNLDVLILGGYYGTGRRRSG 905
Query: 469 EVAQFLVALAERP----------APDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 518
+V+ FLV + +P D P F +F ++GTG + EEL + +L+PY++
Sbjct: 906 DVSVFLVGVLPQPLNEDMILKASTLDELP-PFYTFAKIGTGYNLEELAQMRRELEPYWQP 964
Query: 519 YEYPKRAPPSF--YQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 576
++ PP F +Q S RPDVWI+ P +S +L + S + +LRFP
Sbjct: 965 WD-SNNIPPHFSGWQAM-RSDLRPDVWID-PRRSKVLEVYG-FELTYSTFYKTRLTLRFP 1020
Query: 577 RIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVS 636
R +R DK W++C +Q + + S+ G Q K R+++
Sbjct: 1021 RCHAIRNDKSWYECSTLQD-LSIAQGSSPKRSAADVTIGHQAKK----RATQPRRPLQDK 1075
Query: 637 IVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
IV + Q + ++ + IF D FC+L
Sbjct: 1076 IVAPEYTQAKLENVPKKFDIFRDNEFCVL 1104
>gi|336469513|gb|EGO57675.1| DNA ligase 4 [Neurospora tetrasperma FGSC 2508]
gi|350290843|gb|EGZ72057.1| DNA ligase 4 [Neurospora tetrasperma FGSC 2509]
Length = 1046
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 183/615 (29%), Positives = 317/615 (51%), Gaps = 69/615 (11%)
Query: 27 KKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
++R +F+ + V D++ A+RLIL DR+RG YGLKE+ + L+ + + ++S
Sbjct: 87 QRRHIIERFMSRWRSEVGNDFYPAMRLILSDKDRDRGVYGLKENTIGKLLVKVMKIDRNS 146
Query: 85 ADAVRLINWR----KGGAAPNAGNFPMVAAEVLQRRQGMISGG-LTIKELNDLLDRLASS 139
D L++W+ + G + + G+F EV+ +R G LTI ++N LLDRLA++
Sbjct: 147 EDGYNLMHWKLPGSQSGVSRSVGDFAGRCFEVVSKRAMRAQPGELTIADVNVLLDRLAAA 206
Query: 140 ENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDL 199
AE++ + ++ NA+EM W++ IILKD+++G +E++ + +HPDAE LF+V+ L
Sbjct: 207 SGEAEQLPIFEEFYRQMNAEEMMWLVRIILKDMRVGATERTFLNLWHPDAEALFSVSSSL 266
Query: 200 KLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAWRKL--------HGKEVVI 249
+ VC +L D R ++Q+ I++ + +PQLA W KL E I
Sbjct: 267 RRVCWELFDPEFRLEQQETGIKLMQCFQPQLAQ--FQMTTTWEKLVKNLGVTEENPEFWI 324
Query: 250 ECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVL-------- 293
E K DG+R+Q+H G ++SR D++ YG ++ EQ+ L
Sbjct: 325 EEKLDGERMQMHMIEDDTVPGGFRFAFWSRKAKDYTYLYGESLED--EQSALTRHLHKAF 382
Query: 294 ---VDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYFAFDVLYVGDT 349
V ILDGEM+ WD +++ FG+ + A + ++ + + Y FD+L + D
Sbjct: 383 DDGVRNLILDGEMITWDIDIDKMVPFGTLKTAALEQQKNPSKAGPRPLYRVFDILLLNDK 442
Query: 350 SVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFF 409
+ +L +R L++ V RLE L + A + D +E
Sbjct: 443 PLTEYTLNDRRRALERAVVGVHRRLEILPFER-----------------ATSPDAIEPLL 485
Query: 410 KETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGG 468
+ + EG+VLK+ S++ R+ W+K+KPEY+ G LD +++GGY+GSGRRGG
Sbjct: 486 RRVVAEASEGLVLKNPRSRYSLNSRNNDWIKVKPEYMSDFGESLDCVVVGGYFGSGRRGG 545
Query: 469 EVAQFLVALAER----PAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 524
++ FL + + + + +SF +VG G E+ + + ++ ++ P
Sbjct: 546 TLSSFLCGVRVSQNFIKSGNASAEKCLSFVKVGGGFKAEDYAEIRHHTEGKWQDWD-PSS 604
Query: 525 APPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 581
P + ++ K E+PDVWI P S+++S+ + T +S+ F+ ++LRFPR ++
Sbjct: 605 PPTEYIELGGGEKLQYEKPDVWIR-PSDSVVISVKAASIT-QSDQFAMGWTLRFPRFRKL 662
Query: 582 RYDKPWHDCLDVQSF 596
R D+ W LD+ F
Sbjct: 663 RLDRAWDSALDMDEF 677
>gi|449301934|gb|EMC97943.1| hypothetical protein BAUCODRAFT_120861 [Baudoinia compniacensis
UAMH 10762]
Length = 976
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 192/619 (31%), Positives = 320/619 (51%), Gaps = 62/619 (10%)
Query: 22 TKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALG 79
+ P +RS +F+ + V D + A RLI+P DR+RG YGL+E+ L + +
Sbjct: 64 STPNDIRRSIIERFISRWRKEVGNDIYPAFRLIVPEKDRDRGMYGLRETTLGKLFVRVMK 123
Query: 80 MSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRR-QGMISGGLTIKELNDLLDR 135
+ K+S D L++W+ G ++ AG+F EV+ +R G +TI E+N+LLDR
Sbjct: 124 IDKNSEDGYNLLHWKLPGIKASSAMAGDFAGRCFEVISKRPMRATPGNMTIAEVNELLDR 183
Query: 136 LASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNV 195
L+ ++ + ++ K+ NA+E+ W+I +IL+ +K+G +EK+IF +HPDAE+LFN+
Sbjct: 184 LSVAQKEENQQPIVEEFYKRMNAEELLWLIRMILRQMKIGATEKTIFESWHPDAENLFNI 243
Query: 196 TCDLKLVCEKLKDRNQR--HKRQDIEVGKAVRPQLA---MRIGDAHAAWRKLHGKEVV-- 248
+ L+ VC +L D + R ++ I + + +PQLA MR D + + V
Sbjct: 244 SSSLRRVCWELYDPDVRLVGTQRGINLMQCFQPQLAAFQMRSMDIMVSRMNPTEDDPVFW 303
Query: 249 IECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQ--N 291
IE K DG+R+Q+H G ++SR D++ YG A+++ ++ N
Sbjct: 304 IEEKLDGERMQLHMIEDEEIPGGKRFGFWSRKAKDYTYLYGKDFSDETAALTRYLKDAFN 363
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFG--SNQEIAKAARDGLSSDRQLCYFAFDVLYVGDT 349
V V ILDGEM+ W+ + + FG +++ A +R L Y FD LY+ DT
Sbjct: 364 VGVRNIILDGEMITWNPAEDTVVPFGHLKTAALSEQANPYAEGNRPL-YRVFDCLYLNDT 422
Query: 350 SVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFF 409
+ +L++R E L+ V R+E ++ + A ++E
Sbjct: 423 DLTQYTLRKRREALEASVNTIHRRME-------IHEYFE----------ATKASDIEPHL 465
Query: 410 KETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGG 468
+ + EG+VLK+ S++ +R+ W+K+KPEY+ G +LD ++IGGYYGSG RGG
Sbjct: 466 RRVVAEASEGLVLKNPRSRYRLNERNDDWIKVKPEYMTEFGEELDCVVIGGYYGSGHRGG 525
Query: 469 EVAQFLVAL-----AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
++ F+ L + T P++ SF +VG G S + V + + + ++ K
Sbjct: 526 RLSSFMCGLRVDDDIRASSQGTNPQKCYSFFKVGGGFSASDYAEVRHQTEGKWIDWD-AK 584
Query: 524 RAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDR 580
P + ++ + E+PDVWI+ PE SI+LS+ + T ++ F +LRFPR +
Sbjct: 585 NPPKEWIELGGGWERQFEKPDVWIK-PEDSIVLSVKAASVTT-TDQFRTLVTLRFPRFKK 642
Query: 581 VRYDKPWHDCLDVQSFVEL 599
+R DK W L V F L
Sbjct: 643 IRTDKDWKSALSVHEFNSL 661
>gi|330935335|ref|XP_003304917.1| hypothetical protein PTT_17650 [Pyrenophora teres f. teres 0-1]
gi|311318253|gb|EFQ86998.1| hypothetical protein PTT_17650 [Pyrenophora teres f. teres 0-1]
Length = 988
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 196/623 (31%), Positives = 313/623 (50%), Gaps = 69/623 (11%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P KR+ ++F+ + V D++ A+RLI+P DR+R YGLKE +A LI +
Sbjct: 80 PHEAKRNIIQRFIANWRKQVGNDFYPAMRLIIPEKDRDRAMYGLKEKAIAKVLIKLTRIG 139
Query: 82 KDSADAVRLINWRKGG-----AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDR 135
KDS DA ++NW+ G +A AG+F E+L RQ +TI E+N+ LDR
Sbjct: 140 KDSDDAKHMLNWKLPGQLNKASASTAGDFAGRCYEILSTRQLKTEYSDMTIAEVNNALDR 199
Query: 136 LASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNV 195
L+ E++ + ++ NA+EM W+I +IL+ +K+G +EK+ +HPDAE LFN+
Sbjct: 200 LSQVGAEDEQVKIFQRFYRRMNAEEMTWLIRMILRQMKIGATEKTFLDIWHPDAETLFNI 259
Query: 196 TCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAM---RIGDAHAAWRKLHGKE---- 246
+ +L+ VC +L D R + +D + + + +PQLA ++G + G E
Sbjct: 260 SSNLRRVCWELFDIELRLQGEDTGLSLMQCFQPQLAQFQDKVGSFEKLVTRFKGDENDDT 319
Query: 247 VVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH--------AMSKIIEQ 290
IE K DG+R+Q+H G ++SR D++ YG A+++ I
Sbjct: 320 FWIEEKLDGERMQLHMMEDPDAPGGKLFGFWSRKAKDYAYLYGRHFDGDEAGALTRFITD 379
Query: 291 NV--LVDRCILDGEMLVWDTSLNRFAEFGSNQEIA---KAARDGLSSDRQLCYFAFDVLY 345
V ILDGEM+ WD + FG+ + A K + ++ ++ + FD +Y
Sbjct: 380 AFGENVRNIILDGEMITWDMETDHIVGFGTLKTAALSEKENKTNKNTGQRPLFRVFDCVY 439
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
+ D + +L++R L+ VK RLE V P E A + E+
Sbjct: 440 LNDKLLTQYTLRDRRRALESAVKGVTRRLE-----------VHPYIE------ARSHTEI 482
Query: 406 EKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSG 464
E ++ I EG+VLK+ S + R+ W+K+KPEY+ G LD +++GGY+GSG
Sbjct: 483 EPALRKVIAESSEGLVLKNPRSMYCLNQRNNDWMKVKPEYMSEFGESLDCIVVGGYFGSG 542
Query: 465 RRGGEVAQFLVALA----ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
RGG + FL AL +P Y + SF +VG G S E+ A+ + + + ++
Sbjct: 543 HRGGVHSSFLCALLTDKDAKPGDPKYEHCW-SFFKVGGGFSREDYAAIRGRTEGKWHNWD 601
Query: 521 YPKRAPPSFYQV----TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 576
+R PP F ++ N ERPD WI P S++L + S+ F + +LRFP
Sbjct: 602 --RRRPPPFIELGGHEQNRQHERPDQWIR-PSDSVVLECKA-ASVESSDKFRSTLTLRFP 657
Query: 577 RIDRVRYDKPWHDCLDVQSFVEL 599
R +R DK W L +Q F+++
Sbjct: 658 RFKLLRVDKRWDQALSIQEFLDV 680
>gi|358058474|dbj|GAA95437.1| hypothetical protein E5Q_02090 [Mixia osmundae IAM 14324]
Length = 1026
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 218/704 (30%), Positives = 352/704 (50%), Gaps = 91/704 (12%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV----------DYFSALRLILPSLDRER 60
VL + + IQ+ K A+K+R + D Y ++ D + +RL+LP DRER
Sbjct: 114 VLSDILDVIQE-KQASKRRKP--EITDKYILAIFANWRKDVGLDLYPLIRLLLPDKDRER 170
Query: 61 GSYGLKESVLANCLIDALGMSKDSADAVRLINWR---KGGAAPNAGNFPMVAAEVLQRRQ 117
+YGLKE+ LA AL + KD++ A RL +W+ +GG A AG+F +A EV+Q R
Sbjct: 171 NNYGLKENNLAKVYTKALNLDKDTSAAQRLRDWKNPTQGGKA-RAGDFASIAKEVIQERS 229
Query: 118 GMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGIS 177
G+ LTI E+N+ LDRLA++ +K V++ ++ A E +W+I IILKD+KL +
Sbjct: 230 GVTEHVLTIDEVNENLDRLAAASGEKDKGKVIAWFNERMTANEQRWLIGIILKDMKLSLG 289
Query: 178 EKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMR---- 231
EK + HPDA LFNV DLK VC L D + D I + RP R
Sbjct: 290 EKRVMKVLHPDAMGLFNVCSDLKRVCWTLFDAEITLTKDDTVIRCNRHFRPMFCKRNEKD 349
Query: 232 IGDAHAAWRKLH----GKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS------EYG 281
+GD R +H ++ VIE K DG+RIQ+HK G+ Y+SR D++ +Y
Sbjct: 350 LGD---VIRLMHLNNPDQKFVIEEKLDGERIQLHKFGNNFRYWSRQGTDYTNLYGGNKYK 406
Query: 282 HAMSKIIEQ--NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD---RQL 336
+++ I++ + + + ILDGEMLV+D +++ FG+ + AK ++ SD ++
Sbjct: 407 GSLTPHIQEAFDSAISQIILDGEMLVYDPMMDKLCAFGTLKSAAKQNQEPTFSDGSAQRP 466
Query: 337 CYFAFDVLYV-GDTSVIHQ----SLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
C FD+L V G V++ L++R E L+ +VKP KG +E
Sbjct: 467 CLRIFDILLVKGADGVVYNLAQYPLQKRKEALRTLVKPIKGYIEF--------------- 511
Query: 392 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GS 450
++ ++D++++ ++ EG+V+K + + PG R+ W+KLKPEY+ A
Sbjct: 512 --AHAVEGASLDDIKREMDVVLQASGEGLVIKHPLTLYLPGQRNEAWIKLKPEYMDALWE 569
Query: 451 DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL---------S 501
DLD++I+G + G GRRGG F VA + + + + +VG+G S
Sbjct: 570 DLDLIIVGAFLGEGRRGGMYGSFAVACLDDQLSTEDHKVYANVAKVGSGFKYTDYVNFYS 629
Query: 502 DEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRT 561
+E + TK +P R P + + E+PD +I+ P KSI++++ +
Sbjct: 630 GDEFKNLWTK---------FPARGQPDPSSLKFGA-EKPDYYID-PAKSIVVTVKASSLV 678
Query: 562 IRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKP 621
+ + A +LRFPR +R DK D + S E + T++ + G
Sbjct: 679 RDAVNYGAEVTLRFPRCTAIRTDKDIEDIETLTSVWERL------TKRKQRLGATTTKLD 732
Query: 622 KQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
R R ++K VS S Q S+ + ++ IF + F ++
Sbjct: 733 GHLR-RRVQKRKAVSSEASGDSQLPRSESQLKSRIFKGLTFLVM 775
>gi|358058473|dbj|GAA95436.1| hypothetical protein E5Q_02091 [Mixia osmundae IAM 14324]
Length = 1027
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 218/704 (30%), Positives = 352/704 (50%), Gaps = 91/704 (12%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV----------DYFSALRLILPSLDRER 60
VL + + IQ+ K A+K+R + D Y ++ D + +RL+LP DRER
Sbjct: 114 VLSDILDVIQE-KQASKRRKP--EITDKYILAIFANWRKDVGLDLYPLIRLLLPDKDRER 170
Query: 61 GSYGLKESVLANCLIDALGMSKDSADAVRLINWR---KGGAAPNAGNFPMVAAEVLQRRQ 117
+YGLKE+ LA AL + KD++ A RL +W+ +GG A AG+F +A EV+Q R
Sbjct: 171 NNYGLKENNLAKVYTKALNLDKDTSAAQRLRDWKNPTQGGKA-RAGDFASIAKEVIQERS 229
Query: 118 GMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGIS 177
G+ LTI E+N+ LDRLA++ +K V++ ++ A E +W+I IILKD+KL +
Sbjct: 230 GVTEHVLTIDEVNENLDRLAAASGEKDKGKVIAWFNERMTANEQRWLIGIILKDMKLSLG 289
Query: 178 EKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMR---- 231
EK + HPDA LFNV DLK VC L D + D I + RP R
Sbjct: 290 EKRVMKVLHPDAMGLFNVCSDLKRVCWTLFDAEITLTKDDTVIRCNRHFRPMFCKRNEKD 349
Query: 232 IGDAHAAWRKLH----GKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS------EYG 281
+GD R +H ++ VIE K DG+RIQ+HK G+ Y+SR D++ +Y
Sbjct: 350 LGD---VIRLMHLNNPDQKFVIEEKLDGERIQLHKFGNNFRYWSRQGTDYTNLYGGNKYK 406
Query: 282 HAMSKIIEQ--NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD---RQL 336
+++ I++ + + + ILDGEMLV+D +++ FG+ + AK ++ SD ++
Sbjct: 407 GSLTPHIQEAFDSAISQIILDGEMLVYDPMMDKLCAFGTLKSAAKQNQEPTFSDGSAQRP 466
Query: 337 CYFAFDVLYV-GDTSVIHQ----SLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
C FD+L V G V++ L++R E L+ +VKP KG +E
Sbjct: 467 CLRIFDILLVKGADGVVYNLAQYPLQKRKEALRTLVKPIKGYIEF--------------- 511
Query: 392 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GS 450
++ ++D++++ ++ EG+V+K + + PG R+ W+KLKPEY+ A
Sbjct: 512 --AHAVEGASLDDIKREMDVVLQASGEGLVIKHPLTLYLPGQRNEAWIKLKPEYMDALWE 569
Query: 451 DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL---------S 501
DLD++I+G + G GRRGG F VA + + + + +VG+G S
Sbjct: 570 DLDLIIVGAFLGEGRRGGMYGSFAVACLDDQLSTEDHKVYANVAKVGSGFKYTDYVNFYS 629
Query: 502 DEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRT 561
+E + TK +P R P + + E+PD +I+ P KSI++++ +
Sbjct: 630 GDEFKNLWTK---------FPARGQPDPSSLKFGA-EKPDYYID-PAKSIVVTVKASSLV 678
Query: 562 IRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKP 621
+ + A +LRFPR +R DK D + S E + T++ + G
Sbjct: 679 RDAVNYGAEVTLRFPRCTAIRTDKDIEDIETLTSVWERL------TKRKQRLGATTTKLD 732
Query: 622 KQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
R R ++K VS S Q S+ + ++ IF + F ++
Sbjct: 733 GHLR-RRVQKRKAVSSEASGDSQLPRSESQLKSRIFKGLTFLVM 775
>gi|402223519|gb|EJU03583.1| ATP-dependent DNA ligase [Dacryopinax sp. DJM-731 SS1]
Length = 1006
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 201/686 (29%), Positives = 334/686 (48%), Gaps = 70/686 (10%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKES 68
+L +LF + K KP K+R K+ + V D + A+RL++P D++R YGLKE
Sbjct: 42 LLTALFKDLGKAKPP-KRRDALSKWFHKWRTDVGNDLYPAMRLLVPQCDKDRAVYGLKEQ 100
Query: 69 VLANCLIDALGMSKDSADAVRLINWRKGG-AAPNAGNFPMVAAEVLQRRQGMISGGLTIK 127
+A I L + S A RL NW+K G+FP V + ++ R LTI
Sbjct: 101 AMAKIYITVLELDPKSNTATRLRNWKKPNFTESGTGDFPSVLYDCIKSRV-TAETTLTID 159
Query: 128 ELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHP 187
E+N LLD L++S + +V+S + ++ +A++ WI IILKDLK+ E ++F FHP
Sbjct: 160 EVNSLLDDLSASTKVQAQAAVMSRIAERCSAEDQIWIARIILKDLKIATKENTVFSVFHP 219
Query: 188 DAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLAMRIGDAHAAWRKLHG- 244
A +++N T DLK VC KL D + +D E+ +P L R KL G
Sbjct: 220 SAFEIYNSTSDLKQVCWKLYDLHCTANNEDTEIQLFHPFQPMLCKRPRRELQDVVKLMGR 279
Query: 245 KEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKIIEQ--NVLVDR 296
KE +IE K DG+RIQ+HK G E ++ SR D++ YG +++ I+ + V
Sbjct: 280 KEFIIEEKLDGERIQLHKRGKEYYFCSRKGKDYTYLYGQHVGTGSLTPFIDHAFDDRVKN 339
Query: 297 CILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSL 356
ILDGEMLVWD + FG + A D + C+ FD+L + D + L
Sbjct: 340 VILDGEMLVWDPVTEHYLPFGWLKPAALNKSDD-PTKMHPCFKVFDILMLNDQRIYRWPL 398
Query: 357 KERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENR 416
+R + L+KV +P LE G + +V+ + +++R
Sbjct: 399 HKRKDALRKVFQPVPNVLEYAYETRGRTAK-----------------DVKTELERVMDDR 441
Query: 417 DEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLV 475
EG+V+K+ + R WLK+KPEY+ S+ +DVL++G YG+G+RGG V+ +
Sbjct: 442 GEGLVVKNPDKPYVLAGREDAWLKVKPEYVDEMSETVDVLVVGADYGTGKRGGGVSTLIC 501
Query: 476 ALAERPAPDTYP---------------RRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
A+ + P R F+SF R+G+GLS + + + K E
Sbjct: 502 AVRDDTMSGNDPQQVIFSVNEHADDRARSFLSFVRIGSGLSMSDFEEIRQK-----NWRE 556
Query: 521 YPKRAPPSFYQVTN-NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 579
Y F ++ + ++++PDV+I PE S ++++ + + SE ++ +++RFPR
Sbjct: 557 YTPGEELDFVKLADRGTEDKPDVYIR-PEDSFVITVKA-AEIVTSEKYAMDWTMRFPRCR 614
Query: 580 RVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVP 639
+R D W D + V+ ++ GG + + +++ + ++P
Sbjct: 615 AIRRDATWEDVMTVKEIHDM------------RTGGRKREASSDPSRNKRRKVNQQLVLP 662
Query: 640 SHFLQTDVSDIKGETSIFSDMVFCIL 665
+ + T+V +I+ + +F + F IL
Sbjct: 663 ASSMGTNVKNIQVKNDLFDGLRFVIL 688
>gi|398408189|ref|XP_003855560.1| hypothetical protein MYCGRDRAFT_68344 [Zymoseptoria tritici IPO323]
gi|339475444|gb|EGP90536.1| hypothetical protein MYCGRDRAFT_68344 [Zymoseptoria tritici IPO323]
Length = 964
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 194/621 (31%), Positives = 318/621 (51%), Gaps = 62/621 (9%)
Query: 20 QKTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDA 77
Q P +RS +F+ + V D F A+RLI+P DRERG YG+KE L L+
Sbjct: 62 QGQAPHEARRSIIDRFISRWRKQVGNDIFPAIRLIVPEKDRERGMYGIKEMTLGKLLVRV 121
Query: 78 LGMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRR-QGMISGGLTIKELNDLL 133
+ ++KDS D L++W+ G ++ AG+F EV+ +R G +TI ++N++L
Sbjct: 122 MKINKDSEDGYNLLHWKLPGVKASSAMAGDFAGRCFEVISKRPMRQTPGDMTIAQVNEML 181
Query: 134 DRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLF 193
DRL+ ++ + ++ + A+EM W+I +IL+ +K+G SE++ F +H DAE+LF
Sbjct: 182 DRLSVAQKEENQRPIIEEFYNRMCAEEMMWLIRMILRQMKVGASERTFFDVWHQDAENLF 241
Query: 194 NVTCDLKLVCEKLKDRNQRHK--RQDIEVGKAVRPQLA---MRIGDAHAAWRKL--HGKE 246
N++ +L+ VC +L D + R + I + + +PQLA MR + A K E
Sbjct: 242 NISSNLRRVCWELWDPDVRLEGDSAGIALMQCFQPQLAAFQMRSMEQMVARMKPTEEDAE 301
Query: 247 VVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQ- 290
IE K DG+R+Q+H G ++SR D++ YG A+++ I+
Sbjct: 302 FWIEEKLDGERMQLHMVEDDQIPGGKRFGFWSRKAKDYTYLYGKHFEDDNSALTRHIKNA 361
Query: 291 -NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYFAFDVLYVGD 348
N V ILDGEM+ WD FG+ + A ++ S+ + + FD L++ D
Sbjct: 362 FNEGVRNIILDGEMITWDPKEQALVPFGTLKTAALSEQQNPFSTGNRPVFRIFDCLFLND 421
Query: 349 TSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKF 408
+ H +L+ RHE L K V R+E ++ H + A E+E
Sbjct: 422 KDLTHYTLRVRHEALLKSVTSIDQRME-------IHEHQK----------ATQASEIEPV 464
Query: 409 FKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRG 467
++ + EG+VLK+ S++ +R+ W+K+KPEY+ G LD +++GGYYGSG+RG
Sbjct: 465 LRKVVAEASEGLVLKNPRSEYRLNERNDDWIKVKPEYMTEFGESLDCIVVGGYYGSGKRG 524
Query: 468 GEVAQFLVALAERPA------PDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 521
G ++ FL L + A + P+ +SF +VG G + + + + + + +
Sbjct: 525 GGLSSFLCGLKPQQAIFSSQNRNINPQMVLSFFKVGGGFAASDYAEIRHRTEGKWTDWNA 584
Query: 522 PKRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRI 578
K PP+ + V E+PDVWI+ PE SI+LS+ + T ++ F+ +LRFPR
Sbjct: 585 KK--PPTDWVVLGGGDRQFEKPDVWIK-PEDSIVLSVKAASVTGTTQ-FATGCTLRFPRF 640
Query: 579 DRVRYDKPWHDCLDVQSFVEL 599
++R DK W L F L
Sbjct: 641 KKLRTDKDWTQALTQDEFNAL 661
>gi|396485689|ref|XP_003842232.1| similar to DNA ligase [Leptosphaeria maculans JN3]
gi|312218808|emb|CBX98753.1| similar to DNA ligase [Leptosphaeria maculans JN3]
Length = 989
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 202/689 (29%), Positives = 339/689 (49%), Gaps = 75/689 (10%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P KR+ +F+ + V D++ A+RLI+P DR+R YGLKE +A LI +
Sbjct: 72 PHEAKRNIIDRFIANWRKKVGNDFYPAMRLIIPEKDRDRAMYGLKEKAIAKVLIKLTRIG 131
Query: 82 KDSADAVRLINWRKGG-----AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDR 135
KDS DA +++NW+ G + AG+F EVL RQ ++I E+N+ LD+
Sbjct: 132 KDSDDAKQMLNWKLPGQLHKASTSTAGDFAGRCYEVLSSRQLRTEYSDMSIAEVNNALDK 191
Query: 136 LASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNV 195
L+ E++ + ++ NA+EM W+I +IL+ +K+G +EK+ +HPDAE LFN+
Sbjct: 192 LSQVGAEEEQVKIFQRFYRRMNAEEMTWLIRMILRQMKIGATEKTFLDIWHPDAETLFNI 251
Query: 196 TCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAWRKL--------HGK 245
+ +L+ VC +L D R +D + + + +PQLA D ++ KL
Sbjct: 252 SSNLRRVCWELYDPEIRLDGEDTGLSLMQCFQPQLAA-FQDKVGSFEKLVTRFQTDPDDN 310
Query: 246 EVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHS---------EYGHAMSKIIE 289
IE K DG+R+Q+H G ++SR D++ E A+++ I+
Sbjct: 311 TFWIEEKLDGERMQLHMIEDPDAPGGKLFGFWSRKAKDYAYLYGRHFQGEEAGALTRFIK 370
Query: 290 QNV--LVDRCILDGEMLVWDTSLNRFAEFGSNQEIA---KAARDGLSSDRQLCYFAFDVL 344
V ILDGEM+ WD ++ FG+ + A K + + ++ + FD +
Sbjct: 371 DAFGKNVRNIILDGEMITWDMDVDHIVGFGTLKTAAISEKENKMNKDTGQRPLFRVFDCV 430
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
Y+ D + +L++R L+ VK RLE + P +SH E
Sbjct: 431 YLNDKLLTQYTLRDRRRALESAVKGIHRRLE-IHPYIEASSHT----------------E 473
Query: 405 VEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGS 463
+E ++ + EG+VLK+ S + +R+ W+K+KPEY+ G LD +I+GGY+GS
Sbjct: 474 IEPALRKVVAESSEGLVLKNPRSMYRLNERNNDWMKVKPEYMSEFGESLDCVIVGGYFGS 533
Query: 464 GRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
G RGG + FL AL + D + SF +VG G S ++ A+ + + ++ ++
Sbjct: 534 GHRGGAHSSFLCALLIDKDAKHGDQDYEKCWSFFKVGGGFSRDDYAAIRGRTEGKWKDWD 593
Query: 521 YPKRAPPSFYQ----VTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 576
R PP F + + N ERPD WI + ++ S + S+ F +LRFP
Sbjct: 594 I--RRPPPFIELGGHLENRHHERPDQWINPSDSVVVECKASSVEA--SDKFRTGLTLRFP 649
Query: 577 RIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVS 636
R ++R DK W L +Q F +L H T + ++ ++ + K+ R+S KK ++
Sbjct: 650 RFRQLRSDKRWDQALSLQEFQDLKHDVERTLAEKEKEFKIEASRRKKARTS----KKPLT 705
Query: 637 IVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ + L+T + E+ +F + F I+
Sbjct: 706 VAGNETLKTPYAG--PESKLFDGLSFYIM 732
>gi|452986474|gb|EME86230.1| hypothetical protein MYCFIDRAFT_132548 [Pseudocercospora fijiensis
CIRAD86]
Length = 967
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 193/616 (31%), Positives = 314/616 (50%), Gaps = 60/616 (9%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P +R +F+ + V D + A+RLI+P DR+RG YGLKE +A L+ L +
Sbjct: 67 PNEVRRQIIDRFISRWRKEVGDDIYPAMRLIVPEKDRDRGMYGLKEMTIAKLLVKILKID 126
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L +W++ G + AG+F EV+ +R + G +TI E+N+ LDRLA
Sbjct: 127 KNSDDGRNLTHWKQPGLNSTSAMAGDFAGRCFEVISKRPMRTTPGDMTIAEVNERLDRLA 186
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
++ ++ +L + NA+EM W++ +IL+ +K+G +EK+ F +HPDAE LFN++
Sbjct: 187 VAQKEENQLPILEQFYSRMNAEEMMWLVRMILRQMKVGATEKTFFEIWHPDAETLFNISS 246
Query: 198 DLKLVCEKLKDRNQR--HKRQDIEVGKAVRPQLA---MRIGDAHAAWRKLHGKEVV--IE 250
L+ VC +L D R + + I + + +PQLA MR + A ++ V IE
Sbjct: 247 SLRRVCWELYDPAVRLEGESRGICLMQCFQPQLAAFQMRSTEHMVAKMGTTDEDPVFWIE 306
Query: 251 CKFDGDRIQI-------HKNGSEIHYFSRSFLDHSE-YG-------HAMSKIIEQNVL-- 293
K DG+R+Q+ H G ++SR D++ YG A+++ I+
Sbjct: 307 EKLDGERMQMHVMEDDDHPGGVRFGFWSRKAKDYTYLYGSGFEDDHSALTRHIKDAFASG 366
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYFAFDVLYVGDTSVI 352
V ILDGEM+ WD L+ FG+ + A + ++ + + Y FD LY+ D +
Sbjct: 367 VRNIILDGEMITWDIQLDAIVTFGTLKTAAIEQQQNPFADGNRPLYRVFDCLYLNDKDLT 426
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
+L++R LQ +K + R+E H A VDE +
Sbjct: 427 RYTLRDRRNALQCSIKNVRRRIEI----HEYQEEK----------TASKVDET---LRRV 469
Query: 413 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVA 471
+ EG+VLK+ S + R+ W+K+KPEY+ G LD +++GGYYGSG+RGG ++
Sbjct: 470 VAEASEGLVLKNPRSLYHLNARNDDWIKVKPEYMTEFGESLDCIVVGGYYGSGKRGGGLS 529
Query: 472 QFLVAL-----AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
FL L + PD P++ +SF +VG G S + + + + ++ K+ P
Sbjct: 530 SFLCGLYVPSQKKEIQPDINPQKTLSFFKVGGGFSASDYAQIKHMTEGKWNDWDR-KKPP 588
Query: 527 PSFYQVTNN---SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 583
+ ++ ERPDVWI+ PE S ++S+ + S+ F+ ++LRFPR ++R
Sbjct: 589 FDWVELGGGMVKQYERPDVWIK-PEDSFVVSVKA-ASVGASDQFACGFTLRFPRFKKLRT 646
Query: 584 DKPWHDCLDVQSFVEL 599
DK W L F+EL
Sbjct: 647 DKSWQQALSHDDFIEL 662
>gi|91089809|ref|XP_968774.1| PREDICTED: similar to ligase IV, DNA, ATP-dependent [Tribolium
castaneum]
gi|270014275|gb|EFA10723.1| ligase4-like protein [Tribolium castaneum]
Length = 847
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 204/649 (31%), Positives = 319/649 (49%), Gaps = 63/649 (9%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV-DYFSALRLILPSLDRERGSYGLKESV 69
L + ++ K +K + F+ + D D FS LRL++P LDRER SY LKES
Sbjct: 5 TLCDFLDSVRSAKGVPEKSKLTKTFVKSLRDQQQDLFSVLRLVVPKLDRERPSYRLKESK 64
Query: 70 LANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKEL 129
+A +I L + V + G A +F V VLQ+ GL+I+ +
Sbjct: 65 IAKLIIKMLDLPNGGDKTVL-----QKGIAGTTVDFVDVIHSVLQKYIVNKEIGLSIRAI 119
Query: 130 NDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDA 189
ND LD++A+ + + ++ + K + + +KW+I+IILKDLKLG + SI + FHPD
Sbjct: 120 NDFLDQIANRSSDSGLDDLVLQFLLKLSPRNIKWLILIILKDLKLGFGDNSILNCFHPDG 179
Query: 190 EDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVI 249
D F +L+ C+ ++D R +I V +A RP L+ R A+ K +I
Sbjct: 180 ADFFATNSNLRNFCDLIRDPQVRLNELEINVFQAFRPMLSKRCDAANFKKCFPESKTFII 239
Query: 250 ECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVL-------VDRCILDG 301
E KFDG+R Q+H + YFSR+ D+++ YG + + I L R ILDG
Sbjct: 240 ENKFDGERFQLHMADGQFRYFSRNGFDYTDTYGASFTAGIFTPKLRPVLGPETKRVILDG 299
Query: 302 EMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHE 361
EM++W+ F G N ++ K G Q C+ FD+L D + +Q L +R +
Sbjct: 300 EMMLWNRETRSFGSKGMNLDVKKLGEGG---KYQPCFCVFDILLHNDRVLTNQPLFKRLK 356
Query: 362 LLQKVVK-PSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGI 420
L+ VVK P +G T+V V E A ++ ++ +++N +EGI
Sbjct: 357 CLKSVVKNPVEG---TIV--------VSQYSE------ASSLGDIVDALNSSVDNNEEGI 399
Query: 421 VLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAE 479
V+KD S ++ DR+ W K+K EY DLDV+++GG Y SG+ + F V ++
Sbjct: 400 VVKDTKSVYKCSDRNSGWFKVKMEYFDDVVHDLDVILMGGCYSSGK----LNSFFVGVSS 455
Query: 480 RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY---FRKYEYPKRAPPSFYQVTNNS 536
+TY +SF R+ +GLSDE+LD + K + F+ + F
Sbjct: 456 --GANTY----LSFGRISSGLSDEQLDLLAEKFQSKGVDFKSFSTESEGKLQF------G 503
Query: 537 KERPDVWIESPEKSIILSI--TSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQ 594
++RPD++IE P S IL I T IRT V PY+LRFPR+ ++R DKP +C +
Sbjct: 504 RDRPDLYIE-PHNSCILQIRATELIRTTNDTV-KCPYTLRFPRVLKIRDDKPVDECFSIN 561
Query: 595 SFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFL 643
+EL + + K + L + K +R +K + ++ S L
Sbjct: 562 ELLELAGQNKPVIKLNKRHIELSEISAK----ARPAKKIKLEVIKSDLL 606
>gi|350632724|gb|EHA21091.1| hypothetical protein ASPNIDRAFT_55114 [Aspergillus niger ATCC 1015]
Length = 1009
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 191/630 (30%), Positives = 327/630 (51%), Gaps = 63/630 (10%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P K+R +F+ + V D + A RLILP DR+R YG+KE + L+ + +
Sbjct: 82 PHEKRRDVIERFISRWRKEVGDDIYPAFRLILPDKDRDRAMYGIKEKAIGKLLVKIMKID 141
Query: 82 KDSADAVRLINWRKGGAAPN----AGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRL 136
K+S D L+NW+ G AG+F +V+ +R G ++I+E+ND LD+L
Sbjct: 142 KNSDDGFNLLNWKLPGQLATSRFMAGDFARRCYDVISKRPMRTEVGNMSIEEVNDRLDQL 201
Query: 137 ASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVT 196
+++ +++ +LS +K N +E+ W+I IIL+ +K+G +E+++F+ +HPDA +L++++
Sbjct: 202 SNASKEEQQLPILSEFYRKMNPEELLWLIRIILRQMKVGATERTLFNVWHPDAANLYSIS 261
Query: 197 CDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLA---MRIGDAHAAWRKLHGKE----V 247
L+ VC +L D N R ++ I + + +PQLA M+ D A ++ G E
Sbjct: 262 SSLQRVCWELHDPNIRLGAENSGISLMQCFQPQLAQFQMQSLDRMIA--RMRGTEEDPVF 319
Query: 248 VIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNV 292
IE K DG+R+Q+H G + ++SR D++ YG A+++ ++
Sbjct: 320 WIEEKLDGERMQLHMETDSSVPGGKKFRFWSRKAKDYTYLYGKSLEDPNGALARHLKDAF 379
Query: 293 L--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYFAFDVLYVGDT 349
V+ ILDGEM+ W+ FG+ + A A R+ S+ + + FD+L +
Sbjct: 380 ADGVNSLILDGEMIAWNPEQGAPEPFGTLKTAALAEQRNPFSNGSRPLFRVFDLLLLNGH 439
Query: 350 SVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFF 409
++ +L++R LQK VK R E + P E A + ++E
Sbjct: 440 NLTRYTLRDRRNALQKSVKSVHRRFE-----------IHPYEE------ATDKAQIEAAL 482
Query: 410 KETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGG 468
++ + EG+V+K+ S + +R W+K+KPEY+ G LD+++IGGYYGSG RGG
Sbjct: 483 RKVVAEASEGLVVKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVIGGYYGSGHRGG 542
Query: 469 EVAQFLVALAERPAPDTY---PRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA 525
++ FL L A + + SFC+VG G + + + + + P++
Sbjct: 543 GLSSFLCGLRADNASSSQGIGATKCYSFCKVGGGFTAADYANIRHHTDGKWVDWN-PRKP 601
Query: 526 PPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 583
P ++ ++ S ERPD WI+ PE S++L + + ++ S+ F +LRFPR R+R
Sbjct: 602 PTAYIELAGGSAQHERPDQWIK-PEDSVVLCVKAASVSV-SDQFRVGLTLRFPRFKRLRM 659
Query: 584 DKPWHDCLDVQSFVELVHSSNGTTQKGKEY 613
DK W L +Q F++L S+ QK KE+
Sbjct: 660 DKDWKSALSMQEFLDL-KSNVEKEQKEKEF 688
>gi|357575836|gb|AET85548.1| DNA ligase [Aspergillus glaucus]
Length = 1018
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 200/679 (29%), Positives = 339/679 (49%), Gaps = 63/679 (9%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++R +F+ + V D + A RLILP DR+R YG+KE V+ L+ + +
Sbjct: 75 PIERRRDIIERFISRWRRGVGDDIYPAFRLILPDRDRDRAMYGMKEKVIGKMLVKIMKID 134
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+ D L+NW+ G A AG F +V+ +R G + I+E+N+ LD+L+
Sbjct: 135 KNFEDGFNLLNWKLPGQTAATRMAGGFAGRCYDVISKRPMRTELGNMLIEEVNEKLDQLS 194
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
+ ++ VL+ ++ + +E+ W+I IIL+ +K+G +E++ F +H DAE+L++++
Sbjct: 195 VASKEENQLPVLAEFYRRMSPEELLWLIRIILRQMKVGATERTFFDVWHSDAENLYSISS 254
Query: 198 DLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLA---MRIGDAHAAWRKLHGKEVV--IE 250
L+ VC +L D N R + +D I + + +PQLA M + + K + V IE
Sbjct: 255 SLRRVCWELHDPNLRLEAEDRGITLMQCFQPQLAQFQMHSLEKMISRMKPTDDDPVFWIE 314
Query: 251 CKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNVL-- 293
K DG+R+Q+H G ++SR D++ YG+ A+++ + +
Sbjct: 315 EKLDGERMQLHMAPDSSLPGGRRFGFWSRKAKDYTYLYGNGIHDENGALTRHLGDAFVDG 374
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYFAFDVLYVGDTSVI 352
V ILDGEM+ W + FG+ + A A R+ S+ + + FD+LY+ V
Sbjct: 375 VQSVILDGEMVTWGPEQDAPVPFGTLKTAAIAEQRNPFSTGPRPLFRVFDLLYLNGRDVT 434
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
+L++R LQK VK RLE + P E A E+E +
Sbjct: 435 KYTLRDRRNALQKAVKSVNRRLE-----------IHPYQE------ATTTAEIETALRTV 477
Query: 413 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVA 471
+ EG+VLK S + +R W+K+KPEY+ G LD++++G YYGSGRRGG ++
Sbjct: 478 VAEASEGLVLKSPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVVGAYYGSGRRGGSLS 537
Query: 472 QFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
FL L + + T P + SFC+VG G + ++ + + ++ PK+ P +
Sbjct: 538 SFLCGLRVDGAQSSQSTNPMKCYSFCKVGGGFNAQDYANIRHHTDGKWMDWD-PKKPPMT 596
Query: 529 FYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
+ ++ ERPDVWI P+ S++L + + ++ S+ F +LRFPR R+R DK
Sbjct: 597 YIELAGGDAQYERPDVWIR-PDDSVVLCVKAASVSV-SDQFRMGLTLRFPRFKRLRSDKD 654
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
W L VQ F++L S+ K KE+ K + R++++ + + + +
Sbjct: 655 WKTALSVQEFLDL-KSNVEQEHKEKEFSVDNSRKKRVKRTTKRPLE-----IAGYNADKE 708
Query: 647 VSDIKGETSIFSDMVFCIL 665
V + IF + F IL
Sbjct: 709 VGYVGPSGRIFEGLSFYIL 727
>gi|134057838|emb|CAK44569.1| unnamed protein product [Aspergillus niger]
Length = 1009
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 188/628 (29%), Positives = 325/628 (51%), Gaps = 59/628 (9%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P K+R +F+ + V D + A RLILP DR+R YG+KE + L+ + +
Sbjct: 82 PHEKRRDVIERFISRWRKEVGDDIYPAFRLILPDKDRDRAMYGIKEKAIGKLLVKIMKID 141
Query: 82 KDSADAVRLINWRKGGAAPN----AGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRL 136
K+S D L+NW+ G AG+F +V+ +R G ++I+E+ND LD+L
Sbjct: 142 KNSDDGFNLLNWKLPGQLATSRFMAGDFARRCYDVISKRPMRTEVGNMSIEEVNDRLDQL 201
Query: 137 ASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVT 196
+++ +++ +LS +K N +E+ W+I IIL+ +K+G +E+++F+ +HPDA +L++++
Sbjct: 202 SNASKEEQQLPILSEFYRKMNPEELLWLIRIILRQMKVGATERTLFNVWHPDAANLYSIS 261
Query: 197 CDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLA-MRIGDAHAAWRKLHGKE----VVI 249
L+ VC +L D N R ++ I + + +PQLA ++ ++ G E I
Sbjct: 262 SSLQRVCWELHDPNIRLGAENSGISLMQCFQPQLAQFQMQSLDRILPRMRGTEEDPVFWI 321
Query: 250 ECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNVL- 293
E K DG+R+Q+H G + ++SR D++ YG A+++ ++
Sbjct: 322 EEKLDGERMQLHMETDSSVPGGKKFRFWSRKAKDYTYLYGKSLEDPNGALARHLKDAFAD 381
Query: 294 -VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYFAFDVLYVGDTSV 351
V+ ILDGEM+ W+ FG+ + A A R+ S+ + + FD+L + ++
Sbjct: 382 GVNSLILDGEMIAWNPEQGAPEPFGTLKTAALAEQRNPFSNGSRPLFRVFDLLLLNGHNL 441
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+L++R LQK VK R E + P E A + ++E ++
Sbjct: 442 TRYTLRDRRNALQKSVKSVHRRFE-----------IHPYEE------ATDKAQIEAALRK 484
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEV 470
+ EG+V+K+ S + +R W+K+KPEY+ G LD+++IGGYYGSG RGG +
Sbjct: 485 VVAEASEGLVVKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVIGGYYGSGHRGGGL 544
Query: 471 AQFLVALAERPAPDTY---PRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
+ FL L A + + SFC+VG G + + + + + P++ P
Sbjct: 545 SSFLCGLRADNASSSQGIGATKCYSFCKVGGGFTAADYANIRHHTDGKWVDWN-PRKPPT 603
Query: 528 SFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
++ ++ S ERPD WI+ PE S++L + + ++ S+ F +LRFPR R+R DK
Sbjct: 604 AYIELAGGSAQHERPDQWIK-PEDSVVLCVKAASVSV-SDQFRVGLTLRFPRFKRLRMDK 661
Query: 586 PWHDCLDVQSFVELVHSSNGTTQKGKEY 613
W L +Q F++L S+ QK KE+
Sbjct: 662 DWKSALSMQEFLDL-KSNVEKEQKEKEF 688
>gi|391329203|ref|XP_003739065.1| PREDICTED: DNA ligase 4-like [Metaseiulus occidentalis]
Length = 741
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 186/603 (30%), Positives = 311/603 (51%), Gaps = 48/603 (7%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNA- 102
D F +RL+LP+LD RG+Y +KE+++ I G+S+++ A ++N+++ +
Sbjct: 72 DIFQLIRLLLPNLDNVRGAYHMKETMIGREYIRLTGLSQETRKAQEILNFKRSDPSGKRF 131
Query: 103 ---GNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQ 159
F + E+L+ R M S L+I+++ND+L+ + S++ A+ + L L +
Sbjct: 132 GFRKGFETLVFEILKNRSNMKSSELSIQKINDILNEMTKSKDAAQ--TQLKFLFSHCDPL 189
Query: 160 EMKWIIMIILK-DLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDI 218
E KW+I IIL+ L + S + HP AE++++V +L+ +C L D R I
Sbjct: 190 EHKWLIRIILRHSLNIRKSTSVVLGALHPMAEEMYSVNRNLEDICMTLYDAELVVSRPKI 249
Query: 219 EVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS 278
+GK L+ R A H E ++E KFDG+R+Q HKN +E Y+SR + ++S
Sbjct: 250 GLGKPFGFMLSARSNLASLESDMGHS-EFLMEIKFDGERVQCHKNQNEFSYYSRGYNEYS 308
Query: 279 -EYGHA----------MSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR 327
YG + +S+ I+ +V+ CI DGEM+ +D +F G ++++ K
Sbjct: 309 ATYGTSGQHDNSLSSYLSRAIDPHVVT--CIFDGEMMSYDGISKKFVPKGRSRDLKKIKT 366
Query: 328 DGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHV 387
D +S Q CY FD+LY + L ER +L+ ++ P +GR++ GL
Sbjct: 367 DDVS--HQPCYMIFDLLYYNGKVFTDKPLLERRRVLENLLTPIEGRVQLSAARSGLTK-- 422
Query: 388 RPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIR 447
DE KF E N +EGIV+K + P +R WLKLK +Y+
Sbjct: 423 ---------------DEALKFMNEATSNLEEGIVIKKADGPYVPNERDAGWLKLKRDYMN 467
Query: 448 AG-SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDT-YPRRFISFCRVGTGLSDEEL 505
G +DLDV+I+G YY +G+ LVA+AE P + P+ F SF RV +GLS+ +
Sbjct: 468 EGVADLDVIIVGAYYAAGKTAIIYDSLLVAVAEDPETSSDPPKYFYSFGRVHSGLSEAFM 527
Query: 506 DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSE 565
++ K ++ + K P++ ++++ + P+V IE P+ S+IL++ + + ++
Sbjct: 528 KDLLGKTGDAWKPFNRDK--CPTWLKMSSMA-NCPNVIIE-PKSSVILTVKA-AELVPTK 582
Query: 566 VFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFR 625
F S+RFPR+ +R+DKPW DC+ +L + GT G L+ K +Q R
Sbjct: 583 SFMTECSMRFPRVSALRFDKPWKDCMRYSELAKLYRETKGTMTAGDLKIDLETKK-EQVR 641
Query: 626 SSR 628
S R
Sbjct: 642 SGR 644
>gi|425772167|gb|EKV10581.1| DNA ligase 4 [Penicillium digitatum Pd1]
gi|425777342|gb|EKV15520.1| DNA ligase 4 [Penicillium digitatum PHI26]
Length = 974
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 199/685 (29%), Positives = 349/685 (50%), Gaps = 79/685 (11%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++R +F+ + V D + ALRLILP DR+R YG+KE + L+ + ++
Sbjct: 51 PFERRRDVIERFISRWRKDVGNDIYPALRLILPDKDRDRPMYGIKEKAIGKMLVKIMKIN 110
Query: 82 KDSADAVRLINWR---KGGAAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ +G AG+F +VL +R G +TI E+N+ LD+L+
Sbjct: 111 KESEDGYNLLNWKLPGQGATTRMAGDFAGRCFDVLSKRPMRTEPGDMTIDEVNEKLDKLS 170
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
++ E++ +L+ ++ N +E+ W++ IIL+ +K+G +E+++F +HPDAE+L++++
Sbjct: 171 AASKEDEQLPILTEFYRRMNPEELLWLVRIILRQMKVGATERTLFDVWHPDAENLYSISS 230
Query: 198 DLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAM--------------RIGDAHAAWRK 241
L+ VC +L D N R + ++ I + + +PQLA D H W
Sbjct: 231 SLRRVCWELHDPNIRLEGEERGIALMQCFQPQLAQFQMHSFEKIIARMKPTEDDHVFW-- 288
Query: 242 LHGKEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSK 286
IE K DG+R+Q+H + G + ++SR +++ YG+ A+++
Sbjct: 289 -------IEEKMDGERMQLHMAPDDSIQGGRKFGFWSRKAKEYTYLYGNGIYDENGALTR 341
Query: 287 IIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYFAFDV 343
++ + V ILDGEM+ WD + FG+ + A A R+ S+ + + FD+
Sbjct: 342 HLKDAFVDGVQSIILDGEMITWDPEQDAMVPFGTLKTAALAEQRNPFSNAPRPLFRVFDI 401
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
L++ + +L++R L+K ++P R E ++S+ A
Sbjct: 402 LHLNGRDLTKYALRDRRNALEKTIRPVYRRFE-------IHSYE----------EATTTT 444
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYG 462
EVEK ++ + EG+VLK+ S + +R W+K+KP+Y+ G LDV++IGGYYG
Sbjct: 445 EVEKALRKVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPDYMTEFGESLDVVVIGGYYG 504
Query: 463 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
SG RGG ++ FL L + + + SFCRVG G + + V + ++ ++
Sbjct: 505 SGHRGGALSSFLCGLRVDDSTQAAEKCW-SFCRVGGGFTAADYQEVRHHTEGKWKVWD-A 562
Query: 523 KRAPPSFYQVT--NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDR 580
K+ P +F ++ + ERPD+WI+ P SI+L + I S+ F +LRFPR +
Sbjct: 563 KKPPTNFIELAGGDAQHERPDMWIK-PSDSIVLCAKAASVAI-SDQFRMGLTLRFPRFKK 620
Query: 581 VRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPS 640
+R DK W L VQ F++L S+ + KE+ K + R+++K V
Sbjct: 621 LRKDKDWKSALSVQEFLDL-KSNAEQEHREKEFSVDNSRKKRVKRATKKP-----LTVAG 674
Query: 641 HFLQTDVSDIKGETSIFSDMVFCIL 665
+ DV ++ IF ++ F ++
Sbjct: 675 YDDNIDVQYLEPSGHIFDELNFFVM 699
>gi|408400641|gb|EKJ79719.1| hypothetical protein FPSE_00173 [Fusarium pseudograminearum CS3096]
Length = 984
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 212/698 (30%), Positives = 346/698 (49%), Gaps = 82/698 (11%)
Query: 16 FNWIQKTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANC 73
F + K P ++R +F+ + V D++ ALRLILP DR+RG YGLKE+ +
Sbjct: 70 FRGVNKLSPHEQRRHIIDRFITRWRKEVGFDFYPALRLILPDKDRDRGVYGLKENAIGKL 129
Query: 74 LIDALGMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKEL 129
L+ + + K+S D L++W+ G A+ AG+F EV+ +R G +TI E+
Sbjct: 130 LVKLMKIDKNSEDGYNLLHWKLPGQTMASRLAGDFAGRCFEVISKRPMRTQVGNMTIAEV 189
Query: 130 NDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDA 189
N+ LD+LA+S E + V + N++E+ W+I I+LK +K+G +EK+ +HPD
Sbjct: 190 NEQLDKLAASSGEMENLRVFEIFYHRMNSEELMWLIRIVLKQMKVGATEKTFLDLWHPDG 249
Query: 190 EDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLAMRIGDAHAAWRKL----- 242
+ LF+V+ LK VC +L + R ++ + V + +PQLA A+++K+
Sbjct: 250 DALFSVSSSLKRVCWELWNPEIRLEQGETGVALMQCFQPQLAQF--QMPASFQKMIQLLR 307
Query: 243 ---HGKEVVIECKFDGDRIQI-------HKNGSEIHYFSRSFLDHSE-YGHAMSKIIEQN 291
E IE K DG+R+Q+ H G + ++SR D++ YG + E +
Sbjct: 308 PTEEDPEFWIEEKLDGERMQVHMVQDKSHPGGRKFCFWSRKAKDYTYLYGDGLQD--ETS 365
Query: 292 VL-----------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL---- 336
L V ILDGEM+ WD +++ FG+ + A + + S +
Sbjct: 366 SLTRHLKDAFTSGVKNLILDGEMITWDMGVDKIVPFGTLKTAAISEQQNKSGTDSVGHRP 425
Query: 337 CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
+ FD+LY+ + + +L++RH L+K +KP RLE H S
Sbjct: 426 LFRVFDILYLNNKPLTQYTLRDRHRALEKAIKPVHRRLEI----HEYTS----------- 470
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 455
A + D +E +E + N EG+VLK+ S + R+ WLK+KPEY+ G LD +
Sbjct: 471 --ATSADAIEPLLREVVANASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCV 528
Query: 456 IIGGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 512
II GYYG+G+RGG ++ FL L P + SF +VG G E+ + +
Sbjct: 529 IIAGYYGTGKRGGALSSFLCGLRVTQNHIQAGANPEKCFSFFKVGGGFRAEDYAEIRHRT 588
Query: 513 KPYFRKYEYPKRAPPSFYQVTNNSK----ERPDVWIESPEKSIILSITSDIRTIRSEVFS 568
+ + E+ +R PPS Y + ERPDVWI K ++ S+ F+
Sbjct: 589 EGKW--IEWDQRNPPSEYIELGGGEARQFERPDVWIRP--KDSVVVSVKAASVGPSDSFA 644
Query: 569 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSR 628
++LRFPR R+R D+ W+ L ++ F EL + ++ KE +D+ R +
Sbjct: 645 LGFTLRFPRFRRLRLDRSWNTALSLEEFQELKQRVD---EESKEKAMTVEDRK---RHNP 698
Query: 629 KGEKKNVSIVPSHFLQTDVSDIKGETS-IFSDMVFCIL 665
K K+ ++I T+V++ GET+ +F + FC+L
Sbjct: 699 KRVKRELTIAGE---DTNVAEFIGETTKLFEGLEFCVL 733
>gi|332016529|gb|EGI57410.1| DNA ligase 4 [Acromyrmex echinatior]
Length = 898
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 196/631 (31%), Positives = 296/631 (46%), Gaps = 62/631 (9%)
Query: 19 IQKTKPAAKKRSKFRKFLDT-----------YCDS-VDYFSALRLILPSLDRERGSYGLK 66
+ KT KK + F+DT Y +S V + LRLILP L+R+RG + LK
Sbjct: 21 VAKTHDIKKKEQILQTFIDTCRNVGDKLKIEYSESDVSLYPILRLILPDLERQRGPHNLK 80
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRKGGAAPN--AGNFPMVAAEVLQRRQGMISGGL 124
+ LAN G +K+S +L N+R ++ +F A VL ++ IS G
Sbjct: 81 QVSLANLYAHVYGFAKNSDSYKKLANYRDLLSSGKFIGNDFADRAYCVLNKKLPRISTGF 140
Query: 125 TIKELNDLLDRLA---SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSI 181
TI +N+ LD ++ ++ R +KI L ++ EMKW+ IILKDL+LGI + I
Sbjct: 141 TIARINEFLDSISERNTNVTRQQKIETFRVLFRQITGFEMKWMTRIILKDLRLGIGTQRI 200
Query: 182 FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRK 241
H +HPDA D F VT DL+ +C++L++ + K I++ +P L R +
Sbjct: 201 LHIYHPDANDKFLVTNDLREICDQLRNPKIKLKECGIQIFTHFKPMLLERCNIENIGKLF 260
Query: 242 LHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE---YGHAMSKIIEQNVLVDRC- 297
++ K+DG+R Q+H + Y +R D + YG S V RC
Sbjct: 261 RDNDLYYVQTKYDGERSQLHMKNGKFKYLTRRGYDITNKYGYGETGSSGFLTAVFT-RCL 319
Query: 298 -------ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILDGE++ W F+ G N ++ + SS Q C+ AFD++ D
Sbjct: 320 NPNCHSFILDGELMAWHKEKRIFSTKGMNLDVKNLS---ASSRHQPCFVAFDMILHNDIL 376
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
+I K+R +LL + +G L C S + N +E+ K F
Sbjct: 377 LIDIPYKDRLKLLNGIFTEEEGSLTV-----------------CQSTLISNREELIKEFN 419
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGG 468
+ N +EG+V+K K++P R G K+K EY D+D++I+GGYYG G+ G
Sbjct: 420 TCLRNNEEGLVIKKCNMKYKPNIRDGNGCYKIKAEYSDNLVQDIDLIILGGYYGEGKYTG 479
Query: 469 EVAQFLVA-LAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
+ F++ +A P +F S V TG+ DE L + TKL PY+ K E P+
Sbjct: 480 IIKSFMMGVVAPTNKERENPSQFFSIVSVSTGIRDEMLRHLQTKLAPYWIK-ERPE---- 534
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 587
+ + +PD+WI PE SIIL+I + +RS + YSLRFPR+ VR DKPW
Sbjct: 535 ---NIVGPKRNQPDMWIH-PEHSIILTIRA-TEIVRSNEYPIGYSLRFPRVTNVRMDKPW 589
Query: 588 HDCLDVQSFVELVHSSNGTTQKGKEYGGLQD 618
+ + L + K L D
Sbjct: 590 YSSCTTLELLSLTKDEGMIQKLTKREATLHD 620
>gi|321264077|ref|XP_003196756.1| DNA ligase (ATP) [Cryptococcus gattii WM276]
gi|317463233|gb|ADV24969.1| DNA ligase (ATP), putative [Cryptococcus gattii WM276]
Length = 1073
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 207/662 (31%), Positives = 332/662 (50%), Gaps = 78/662 (11%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKG--GAAPN 101
D + +RL+LP DRER Y LKES+LA C ID L + K S A RLI W++ G++
Sbjct: 81 DLYPLIRLLLPDKDRERPVYNLKESMLARCYIDILSLEKHSEAAQRLIKWKQPAEGSSNP 140
Query: 102 AGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSE-NRAEKISVLSTLIKKTNAQE 160
G+F V ++ R + G L+++ +N LLD+LA + +AE + +L + + A+E
Sbjct: 141 TGDFAKVCYNEIKARSTVEEGQLSVEAVNMLLDKLAVGKMKQAEYVPILKAINMQCTAEE 200
Query: 161 MKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD--I 218
+WII IILKDL + I E+ + FHPDA DL+N+ DLK VC L D R + + +
Sbjct: 201 QEWIIRIILKDLHISIRERGVLSAFHPDAIDLYNICSDLKRVCWTLYDPGFRLNKNETHL 260
Query: 219 EVGKAVRPQLAMRIGDA---HAAWRKLHGKEVVIECKFDGDRIQIHK--NGSEIHYFSRS 273
E+ + PQL R+ D + A KE ++E K DG+RIQ+H NG++ Y SR
Sbjct: 261 ELFHSFVPQLCGRMNDTSLENIAKAIGAPKEFIMEEKLDGERIQLHMRGNGAQWFYCSRK 320
Query: 274 FLDHSE-YGH-----AMSKIIEQNVLVDRC---ILDGEMLVWDTSLNRFAEFGSNQEIAK 324
D++ YG ++++ I N D ILDGEM+VWD + R+ FG+ +
Sbjct: 321 AKDYTYLYGAHPGEGSLTRYI-ANAFQDNVRNIILDGEMMVWDPVVERYLAFGT---LKS 376
Query: 325 AARDGLSSDR--QLCYFAFDVLYVGDTSVIHQSLKERHELLQ-----KVVKPSKGRLETL 377
AA D + + + C+ FD+L++ D + + L ER LL+ K ++ KGRLE +
Sbjct: 377 AALDHFNDETAPRPCFKVFDILFLNDHCLSRKRLSERKRLLRSGKIFKNIEDYKGRLEFV 436
Query: 378 VPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK 437
G + ++ ++ + +E + EG+V+K ++ R
Sbjct: 437 DEKRG-----------------KSAKDIREYLERVVETKGEGLVVKKTDVIYQTNSRGYD 479
Query: 438 WLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRV 496
W+K+KPEY + G +L+VL++GG++G G R G++++ L L E+ D + F+ F R
Sbjct: 480 WIKVKPEYSDQMGENLEVLVLGGWWGKGGRSGKISRLLCGLREQAFDDGTLQDFL-FNRF 538
Query: 497 GTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN-NSKERPDVWIESPEKSIILSI 555
L +D KP+ R PP+F ++ ++PDV+IE PE S ++ +
Sbjct: 539 WNELFRLRVDFHKKHWKPFDRS------NPPAFMKLGPVGLDDKPDVYIE-PENSFVIEV 591
Query: 556 TSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHD--CLDVQSFVELVHSSNGTTQKGKEY 613
+ + ++LRFPR + YD+ D D F T+K E+
Sbjct: 592 KASEIVPAGGGYGIGFTLRFPRCKYIYYDRNSRDYELDDDWDFC--------GTRKLTEW 643
Query: 614 GGLQD--DKPKQFRSSRKG---------EKKNVSIVPSHFLQTDVSDIKGETSIFSDMVF 662
D +PK+ +G + + + ++F +S+I ETSIFSDM F
Sbjct: 644 ADFMDLFSRPKRSYDDSQGPGKKKKRKVVRSKKNHITTNFRGQKLSNIDVETSIFSDMTF 703
Query: 663 CI 664
I
Sbjct: 704 YI 705
>gi|400593724|gb|EJP61643.1| DNA ligase I [Beauveria bassiana ARSEF 2860]
Length = 1034
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 211/687 (30%), Positives = 340/687 (49%), Gaps = 74/687 (10%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++R +F+ + V D++ ALRLILP DR+RG YGLKE+ + L+ + +
Sbjct: 117 PQEQRRHIIDRFITRWRKEVGPDFYPALRLILPDKDRDRGVYGLKENAIGKLLVKLMKVD 176
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L++W+ G A+ AG+F E + +R G +TI E+N+ LD+LA
Sbjct: 177 KNSEDGYNLLHWKLPGQTTASRLAGDFAGRCYEAISKRPMRTEPGTMTIAEVNEQLDKLA 236
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
+S +E + V T + NA+EM W+I I+L+ +K+G +EK++ + +HPD E LF+V+
Sbjct: 237 ASAGESENLRVFETFYNRMNAEEMLWLIRIVLRQMKVGATEKTLLYLWHPDGETLFSVSS 296
Query: 198 DLKLVCEKLKDRNQRHKRQ--DIEVGKAVRPQLAMRIGDAHAAWRKL--------HGKEV 247
L+ VC +L D R + + I + + +PQLA A+++K+ E
Sbjct: 297 SLRRVCWELWDPAVRLESEGAGITLMQCFQPQLAQ--FQLPASFQKMTELLRPTDDDAEF 354
Query: 248 VIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNV 292
IE K DG+R+Q+H G ++SR +++ YGH ++++ ++
Sbjct: 355 WIEEKLDGERMQMHMMEDPNTPGGKRFCFWSRKAKEYTYLYGHGFQDDNSSLTRHLKNAF 414
Query: 293 L--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGL----SSDRQLCYFAFDVLYV 346
V ILDGEM+ WD +++ FG+ + A A + SS + + FD+LY+
Sbjct: 415 ASGVRNIILDGEMITWDMGVDKMVPFGTLKTAALAEQQNRSGSDSSGHRPLFRVFDILYL 474
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
D + +L++RH L+K VKP RLE H S P D +E
Sbjct: 475 NDKQLTPYTLRDRHTALEKAVKPVHRRLEI----HSYTSATSP-------------DAIE 517
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGR 465
++ + N EG+VLK+ S + R+ WLK+KPEY+ G LD ++IGGYYGSG+
Sbjct: 518 PLLRDVVANASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCVVIGGYYGSGK 577
Query: 466 RGGEVAQFLVALAERP---APDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
RGG ++ +L L P P + SF +VG G E+ + + + + ++
Sbjct: 578 RGGMLSSYLCGLRASPNHIKAGADPEKCFSFFKVGGGFRVEDYAEIRHRTEGKWIDWDV- 636
Query: 523 KRAPPSFYQVTNNSK----ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRI 578
R PPS Y + ERPDVWI K ++ S+ F+ Y+LRFPR
Sbjct: 637 -RNPPSTYIELGGGEAKQYERPDVWIRP--KDSVVVSVKAASVGPSDSFARGYTLRFPRF 693
Query: 579 DRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIV 638
R+R D+ W L V F L + ++ K+ +D+ ++ RK E + IV
Sbjct: 694 RRLRLDRAWDSALSVDEFQSLKQHVD---EESKDKAMTMEDRKRRNPKRRKRE---IVIV 747
Query: 639 PSHFLQTDVSDIKGETSIFSDMVFCIL 665
ET++F + FC+L
Sbjct: 748 GGDVTGPSPQRTPEETALFRGIEFCVL 774
>gi|302685936|ref|XP_003032648.1| DNA ligase IV-like protein [Schizophyllum commune H4-8]
gi|300106342|gb|EFI97745.1| DNA ligase IV-like protein [Schizophyllum commune H4-8]
Length = 1065
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 199/682 (29%), Positives = 340/682 (49%), Gaps = 62/682 (9%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTY--CDSVDYFSALRLILPSLDRERGSYGLKES 68
+L + F +Q + K+R + + + + D + LRLILP DRER YGLKE
Sbjct: 40 ILTAFFEKLQGERKQEKRRKLLNHWFNKWREDNGPDLYPVLRLILPHRDRERNVYGLKEK 99
Query: 69 VLANCLIDALGMSKDSADAVRLINWRK--------GGAAPNAGNFPMVAAEVLQRRQGMI 120
LA I + ++K+ DA+RL+ W+K ++ +G+FP V EV+ +R +
Sbjct: 100 ALAKLYIKVIPLNKNDPDAMRLLYWKKPTEKHASTCASSAASGDFPTVLYEVVSKRSSVT 159
Query: 121 SGGLTIKELNDLLDRLASSENRAEKIS-VLSTLIKKTNAQEMKWIIMIILKDLKLGISEK 179
LTI ++ND+LD+LA N++EK S ++ L + ++ W IILKD+ + + E
Sbjct: 160 QSTLTIDDINDMLDQLADMSNKSEKQSKIIQRLYNEATPEQQLWFARIILKDMNISVKET 219
Query: 180 SIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQR--HKRQDIEVGKAVRPQLAMR-IGDAH 236
++F FHPDA+ L+N DLK V +L D + R + +++G+ P L R +
Sbjct: 220 TVFAVFHPDAQALYNTCSDLKKVAWQLADPSIRLHEDEKQVKLGQPFMPMLCKRPMKRIE 279
Query: 237 AAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKIIEQ 290
+++ G E +IE K DG+R+Q+HK G++ +Y SR D++ YG +++ I
Sbjct: 280 DTAQEMDGSEFIIEEKLDGERMQLHKMGNQYYYSSRKGKDYTYLYGSHVGAGSLTPYIAH 339
Query: 291 NV--LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGD 348
D ILDGEMLVWD R FG+ + A ++ R C FD+LY+
Sbjct: 340 RFHKQADSAILDGEMLVWDPISGRNLPFGTLKTAALDQSKKQAAPRP-CLKVFDLLYLNG 398
Query: 349 TSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKF 408
S+I +S R + ++ V++ GR+E + G + ++ +
Sbjct: 399 KSLIDKSTAFRKKNMRLVIEALPGRIEFVDEFKGRTAQ-----------------DIREK 441
Query: 409 FKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRG 467
E + NR EG+V+K S++ R+ W+K+KPEY+ G +DVL++ G YGSGRR
Sbjct: 442 MDEVMANRGEGLVIKHPKSQYVLNGRNNDWIKVKPEYMDNMGETVDVLVVAGNYGSGRRS 501
Query: 468 GEVAQFLVALAERPAPDTYPR---RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 524
G V+ + A+ + ++ ++ +F RVG+GL+ D + + K + + +
Sbjct: 502 GGVSTLICAVFDDRNTGSFNENESKYATFVRVGSGLT--YADYMWLRAKNW---KTWDAK 556
Query: 525 APPSFYQVTNNSKE-RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 583
P++ Q S E + DV++E E + IL + + S+ + Y++RFPR +R
Sbjct: 557 NSPTYLQTAKRSHEDKGDVYLEY-EDTFILKVKA-AEITPSDQYHVRYTMRFPRALSIRE 614
Query: 584 DKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFL 643
+ DC+ + VE + ++ + + RK KK V ++P F
Sbjct: 615 EMAPGDCMTASAVVEQLKTAKKRKMETNKVSST---------KKRKVVKKKVEMLP-RFD 664
Query: 644 QTDVSDIKGETSIFSDMVFCIL 665
D+ D+K E+ +F M F ++
Sbjct: 665 GPDMKDVKEESDLFKGMKFVVI 686
>gi|171686124|ref|XP_001908003.1| hypothetical protein [Podospora anserina S mat+]
gi|170943023|emb|CAP68676.1| unnamed protein product [Podospora anserina S mat+]
Length = 999
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 194/623 (31%), Positives = 312/623 (50%), Gaps = 71/623 (11%)
Query: 27 KKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
++R +F+ + V D++ A+RLILP DR+RG YGLKES + L+ + + +DS
Sbjct: 39 QRRHIIERFMSQWRKEVGDDFYPAMRLILPDKDRDRGVYGLKESGIGKMLVRVMKIGRDS 98
Query: 85 ADAVRLINWR------------KGGAAPNAGNFPMVAAEVLQRRQGM-ISGGLTIKELND 131
D L++W+ G AG+F EV+ +R GG TI E+N
Sbjct: 99 EDGYSLLHWKLPGGGGGNQRFGGKGQPGTAGDFAGRVLEVVGKRAMRGTPGGWTIGEVNV 158
Query: 132 LLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAED 191
LLDRLA + E++ + + + A+E+ W++ IILKD+++G +E++ +HPDAE
Sbjct: 159 LLDRLAGASGEEEQLPIFEEIYRNCCAEEVMWLVRIILKDMRVGATERTFLGLWHPDAEA 218
Query: 192 LFNVTCDLKLVCEKLKDRNQR--HKRQDIEVGKAVRPQLA---MRIGDAHAAWR---KLH 243
LF+V+ L+ VC +L D R K + + + +PQLA M G
Sbjct: 219 LFSVSSSLRRVCWELWDPETRLEQKETGVSLMQCFQPQLAQFQMTTGFGKLVQNLGVTEE 278
Query: 244 GKEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGHAM----SKIIE-- 289
KE IE K DG+R+Q+H G ++SR D++ YG + S +
Sbjct: 279 EKEFWIEEKLDGERMQMHMKEDETVPGGFRFAFWSRKAKDYTYLYGEGLEDDNSALTRHL 338
Query: 290 QNVLVD---RCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYFAFDVLY 345
+N D ILDGEM+ WD +++ FG+ + A ++ + + Y FD+L
Sbjct: 339 KNAFHDGVRELILDGEMITWDPEIDKIVPFGTLKTAALDQQKNPFQNGPRPLYRVFDILL 398
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
+ + +L++RH L+ V+ RLE H S P D +
Sbjct: 399 LNKKPLADYTLRDRHAALEAAVRGEHRRLEI----HPYESATTP-------------DAI 441
Query: 406 EKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSG 464
E F + + EG++LK+ S+++ R+ W+K+KPEY+ G LD +IIGGY+GSG
Sbjct: 442 EPFLRRVVAEASEGLILKNPRSRYQLNSRNNDWIKVKPEYMSEYGESLDCVIIGGYFGSG 501
Query: 465 RRGGEVAQFL--VALAE---RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
RRGG ++ FL V ++E R + +SFC+VG GL E+ + + ++ +
Sbjct: 502 RRGGILSSFLCGVRVSENHVRSGAALTREKCLSFCKVGGGLKAEDYAEIRHHTEGKWQDW 561
Query: 520 EYPKRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 576
+ PP+ Y K E+PDVWI P +S+++SI + S+ F+ ++LRFP
Sbjct: 562 QASN--PPTDYIELAGGKMQYEKPDVWIR-PSESVVMSIKA-ASIGPSDQFAMGWTLRFP 617
Query: 577 RIDRVRYDKPWHDCLDVQSFVEL 599
R ++R DK W + +D FV L
Sbjct: 618 RFRKLRLDKSWDEGMDASDFVLL 640
>gi|315044541|ref|XP_003171646.1| DNA ligase 4 [Arthroderma gypseum CBS 118893]
gi|311343989|gb|EFR03192.1| DNA ligase 4 [Arthroderma gypseum CBS 118893]
Length = 996
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 193/684 (28%), Positives = 332/684 (48%), Gaps = 77/684 (11%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P +R+ +F+ + V D+F A RLI+P DR+R YGLKE + L+ + +
Sbjct: 71 PHELRRNVIERFISRWRQQVGNDFFPAFRLIVPEKDRDRAMYGLKEKAIGKLLVKVMKID 130
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQ-GMISGGLTIKELNDLLDRLA 137
K+S D L+NW+ G A AG+F EV+ +R M G ++I E+N LD LA
Sbjct: 131 KNSEDGYNLLNWKLPGQRAATAMAGDFAGRCFEVISKRPIRMEVGDMSIAEVNSRLDDLA 190
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
++ E+ +L+ ++ N +EM W+I IIL+ +K+G +E++ F +HPDAE LFN++
Sbjct: 191 AASKEDEQQPILAEFYRRMNPEEMMWLIRIILRQMKVGATERTFFEIWHPDAESLFNISS 250
Query: 198 DLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLAMRIGDAHAAWRKLHGKEVV------- 248
L+ VC +L + R + V + +PQLA H+ + + +
Sbjct: 251 SLRRVCWELYLPSIRLDADEARVTLMQCFQPQLAQ--FQMHSFQKMIERMRLAEDDPQFW 308
Query: 249 IECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNVL 293
IE K DG+R+Q+H G ++SR D++ YG+ ++++ + QN
Sbjct: 309 IEEKLDGERMQLHMETNSSIPGGKRFEFWSRKAKDYTYLYGNGFYDESGSLTRHL-QNAF 367
Query: 294 VD---RCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYF-AFDVLYVGD 348
D ILDGEM+ WD + FG+ + A R+ S+ F FD++Y+
Sbjct: 368 ADGVESIILDGEMITWDPEQDAPVPFGTLKTAALSEQRNPFSATGHRPLFRIFDIVYLNG 427
Query: 349 TSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKF 408
+ +L++R L+ V P R E D V + ++E
Sbjct: 428 KPLTRYTLRDRRRALEASVVPVHRRFEIHPYD-----------------VGTSASDIEPL 470
Query: 409 FKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRG 467
++ + EG+VLK+ S + +R+ W+K+KP+Y+ G +D +++GGYYGSG+RG
Sbjct: 471 LRKVVAEASEGLVLKNPNSPYRLNERNDDWMKVKPDYMTEFGESMDCIVVGGYYGSGKRG 530
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G ++ +L L P + SFC+VG G + + + + + PK+ P
Sbjct: 531 GNISSYLCGLRVDAQDGANPMKCYSFCKVGGGFTAADYANIRHHTDGKWHDWN-PKKPPT 589
Query: 528 SFYQVT--NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
+ ++ + ERPDVWI+ P+ S+++ + + T S+ F ++RFPR R+R DK
Sbjct: 590 EYIELAGCDAQHERPDVWIK-PDDSVVVCVKAAAVTP-SDQFRLGLTVRFPRFKRLRMDK 647
Query: 586 PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKG----EKKNVSIVPSH 641
W L VQ F++L + G Q+ K +F+ +G K ++ +
Sbjct: 648 DWQSALSVQEFMDL------------KAGAEQEKKDNEFQVESRGKKAKRSKKKELIIAG 695
Query: 642 FLQTDVSDIKGETSIFSDMVFCIL 665
+ V+ + G+ IF + F ++
Sbjct: 696 SGEAKVAYVGGKAHIFDGLSFFVM 719
>gi|350409555|ref|XP_003488777.1| PREDICTED: DNA ligase 4-like [Bombus impatiens]
Length = 896
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 196/605 (32%), Positives = 294/605 (48%), Gaps = 57/605 (9%)
Query: 43 VDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAP-N 101
V F LRLILP L+RER +Y LKE LA+ I K+S DA++L ++ A
Sbjct: 61 VSLFPILRLILPDLEREREAYNLKEKSLADIYIRIFCFGKNSKDAIKLKQYKTPTAKNIT 120
Query: 102 AGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEM 161
NF A VLQ R ++I+++N +LD L+ N K L++K NA E
Sbjct: 121 RCNFADKAYWVLQNRFQREGSHISIEQINFILDNLSLRRNETFK-----DLLRKLNALEF 175
Query: 162 KWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVG 221
KWI IILK L LGI K I FHPDA+ LFNV+ +L+ +C+ L D R+ DI+V
Sbjct: 176 KWITRIILKSLNLGIGTKKILQVFHPDADSLFNVSSNLRQICDTLYDPQLRY-HHDIQVF 234
Query: 222 KAVRPQLAMRIGDAHAAWRKLHG-KEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE- 279
+P L + + +G K+ ++CK+DG+R QIH + YF+R D +
Sbjct: 235 SHFKPML-LEECQIENVEKLFNGRKQYFVQCKYDGERSQIHMKNGKYKYFTRQGYDITNK 293
Query: 280 --YGHAMSKIIEQNVL-------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGL 330
+G S V V ILDGE++ W G N ++ K ++D
Sbjct: 294 PGFGETTSAGFMSGVFGRLLNPQVKSVILDGELMGWHKERKLLGSKGMNYDVKKLSKD-- 351
Query: 331 SSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQ 390
S Q C+ AFD++ D + ++ ++R E+L+ V K +G L
Sbjct: 352 -SPYQQCFVAFDIIMHNDILLNNEPYEKRLEILKDVFKEEEGCLLL-------------- 396
Query: 391 GEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSG-KWLKLKPEYIRA- 448
C S +E+ K F E+I N++EGIV+K+ SK++P R+G K+K EY
Sbjct: 397 ---CKSTKVSRSEELCKIFNESIRNKEEGIVVKECDSKYKPNVRNGTNCYKIKAEYSEGL 453
Query: 449 GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERP-APDTYPRRFISFCRVGTGLSDEELDA 507
D+D++I+GGYYG + G V FL+ +A P P +F+S V +G S L
Sbjct: 454 VHDIDLIILGGYYGR-KFMGLVNSFLMGVASSTKTPGENPTKFLSVVSVNSGFSMNTLKE 512
Query: 508 VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVF 567
+ K ++ PP K P++WI PE SIIL+I + I S +
Sbjct: 513 LGRMFKDKWQTERPENVVPP---------KVEPNLWIR-PENSIILTIKAS-EMICSNNY 561
Query: 568 SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGT---TQKGKEYGGLQDDKPKQF 624
YSLRFPR+ VR DKPW+D + L+ + T++ Y +++ + +
Sbjct: 562 PTGYSLRFPRVTSVRTDKPWYDVCTTDNLKLLIKDTQPIQKLTKREIPYEDIEEARESKV 621
Query: 625 RSSRK 629
R ++K
Sbjct: 622 RKTKK 626
>gi|302511101|ref|XP_003017502.1| hypothetical protein ARB_04383 [Arthroderma benhamiae CBS 112371]
gi|291181073|gb|EFE36857.1| hypothetical protein ARB_04383 [Arthroderma benhamiae CBS 112371]
Length = 1020
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 197/688 (28%), Positives = 337/688 (48%), Gaps = 81/688 (11%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P +R+ +F+ + V D+F A RLI+P DR+R YGLKE + L+ + +
Sbjct: 67 PHELRRNVIERFISRWRQQVGNDFFPAFRLIVPEKDRDRAMYGLKEKAIGKLLVKVMKID 126
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ G A G+F EV+ +R G ++I ++N LD LA
Sbjct: 127 KNSEDGYNLLNWKLPGQRAATAMTGDFAGRCFEVISKRPLRTEVGDMSIADVNSRLDDLA 186
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
+ ++ +L+ ++ N +EM W+I IIL+ +K+G +E++ F +HPDAE LFN++
Sbjct: 187 VASKEDAQLPILAEFYRRMNPEEMMWLIRIILRQMKVGATERTFFEIWHPDAESLFNISS 246
Query: 198 DLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLA-------------MRIGDAHAAWRKL 242
L+ VC +L + R + + V + +PQLA MR+ +
Sbjct: 247 SLRRVCWELYLPSIRLEADEARVTLMQCFQPQLAQFQMHSFQKIIERMRLAE-------- 298
Query: 243 HGKEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKI 287
E IE K DG+R+Q+H G ++SR +++ YG+ ++++
Sbjct: 299 DDPEFWIEEKLDGERMQLHMETNSSIPGGKRFEFWSRKAKEYTYLYGNGFYDDNGSLTRH 358
Query: 288 IEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYF-AFDV 343
++ V+ ILDGEM+ WD + FG+ + A A R+ S+ F FD+
Sbjct: 359 LKNAFADGVESIILDGEMITWDPEQDAPVPFGTLKTAALAEQRNPFSASGHRPLFRIFDI 418
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
+Y+ + +L++R L+ V P R E + P V +
Sbjct: 419 VYLNGKPLTRYTLRDRRRALEASVIPVHRRFE-----------IHPYQ------VGKSAS 461
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYG 462
++E ++ + EG+VLK+ S + +R+ W+K+KP+Y+ G LD +++GGYYG
Sbjct: 462 DIEPLLRKVVAEASEGLVLKNPNSPYRLNERNDDWMKVKPDYMTEFGESLDCIVVGGYYG 521
Query: 463 SGRRGGEVAQFLVALA--ERPAPD-TYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
SG+RGG ++ +L L + A D T P + SFC+VG G + + + + +
Sbjct: 522 SGKRGGNISSYLCGLRVDDTHAEDGTNPMKCYSFCKVGGGFTAADYANIRHHTDGKWHDW 581
Query: 520 EYPKRAPPSFYQVT--NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 577
+ PK+ P + ++ + ERPDVWI+ P+ SI++ + + T S+ F ++RFPR
Sbjct: 582 D-PKKPPTEYIELAGGDAQHERPDVWIK-PDDSIVVCVKAAAVT-PSDQFRLGLTVRFPR 638
Query: 578 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 637
R+R DK W L VQ F++L G Q+ KE +D + R + K +
Sbjct: 639 FKRLRMDKDWQSALSVQEFMDL---KAGAEQEKKE----KDFQVDNSRRKKTKRSKKKEL 691
Query: 638 VPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ + +V+ + +T IF + FC L
Sbjct: 692 TVAGSGEPNVAYVGSKTHIFDGLSFCGL 719
>gi|327297292|ref|XP_003233340.1| DNA ligase 4 [Trichophyton rubrum CBS 118892]
gi|326464646|gb|EGD90099.1| DNA ligase 4 [Trichophyton rubrum CBS 118892]
Length = 995
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 199/692 (28%), Positives = 343/692 (49%), Gaps = 89/692 (12%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P +RS +F+ + V D+F A RLI+P DR+R YGLKE + LI + +
Sbjct: 67 PHELRRSVIERFISRWRQQVGNDFFPAFRLIVPEKDRDRAMYGLKEKAIGKLLIKVMKID 126
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ G A G+F EV+ +R G ++I ++N LD LA
Sbjct: 127 KNSEDGYNLLNWKLPGQRAATAMTGDFAGRCFEVISKRPLRTEVGDMSIADVNSRLDDLA 186
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
+ E++ +L+ ++ N +EM W+I IIL+ +K+G +E++ F +HPDAE LFN++
Sbjct: 187 VASKEDEQLPILAEFYRRMNPEEMMWLIRIILRQMKVGATERTFFEIWHPDAESLFNISS 246
Query: 198 DLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLA-------------MRIGDAHAAWRKL 242
L+ VC +L + R + + V + +PQLA MR+ +
Sbjct: 247 SLRRVCWELYLPSIRLEADEARVTLMQCFQPQLAQFQMHSFQKIIERMRLAEDDP----- 301
Query: 243 HGKEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKI 287
E IE K DG+R+Q+H G +SR +++ YG+ ++++
Sbjct: 302 ---EFWIEEKLDGERMQLHMETNDSIPGGKRFELWSRKAKEYTYLYGNGFYDDNGSLTRH 358
Query: 288 IEQNVLVD---RCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLS-SDRQLCYFAFD 342
+ +N D ILDGEM+ WD + FG+ + A A R+ S S + + FD
Sbjct: 359 L-KNAFADGVGSIILDGEMITWDPEQDAPVPFGTLKTAALAEQRNPFSASGHRPLFRIFD 417
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
++Y+ + +L++R L+ V P R E + P V +
Sbjct: 418 IVYLNGKPLTRYTLRDRRRALEASVVPVHRRFE-----------IHPYE------VGKSA 460
Query: 403 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYY 461
++E ++ + EG+VLK+ S + +R+ W+K+KP+Y+ G LD +++GGYY
Sbjct: 461 SDIEPLLRKVVAEASEGLVLKNPNSPYRLNERNDDWMKVKPDYMTEFGESLDCIVVGGYY 520
Query: 462 GSGRRGGEVAQFLVALAERPAPDTY------PRRFISFCRVGTGLSDEELDAVVTKLKPY 515
GSG+RGG ++ +L L DT+ P + SFC+VG G + + +
Sbjct: 521 GSGKRGGNISSYLCGLR---VDDTHAEDGANPMKCYSFCKVGGGFTAADYANIRHHTHGK 577
Query: 516 FRKYEYPKRAPPSFYQVT--NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSL 573
+ + PK+ P + ++ + ERPDVWI+ P+ S+++ + + T S+ F ++
Sbjct: 578 WHDWN-PKKPPTEYIELAGGDAQHERPDVWIK-PDDSVVVCVKAAAVTP-SDQFRLGLTV 634
Query: 574 RFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKK 633
RFPR R+R DK W L VQ F++L G Q+ KE Q D ++ + +++ +KK
Sbjct: 635 RFPRFKRLRMDKDWQSALSVQEFMDL---KAGAEQEKKE-KDFQVDNSRR-KQTKRSKKK 689
Query: 634 NVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+++ S + +V+ + +T IF + F ++
Sbjct: 690 ELTVAGSG--EANVAYVGRKTHIFDGLSFFVM 719
>gi|336273572|ref|XP_003351540.1| hypothetical protein SMAC_00082 [Sordaria macrospora k-hell]
gi|380095820|emb|CCC05866.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1825
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 181/617 (29%), Positives = 317/617 (51%), Gaps = 73/617 (11%)
Query: 27 KKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
++R +F+ + V D++ A+RLILP DR+RG YGLKE+ + L+ + + ++S
Sbjct: 969 QRRHIIERFMSRWRSEVGNDFYPAMRLILPDKDRDRGVYGLKENSIGRLLVKVMKIDRNS 1028
Query: 85 ADAVRLINWR---KGGAAPNAGNFPMVAAEVLQRRQGMIS--GGLTIKELNDLLDRLASS 139
D L++W+ + G + + G+F EV+ +R M S G +T+ ++N LLDRLA +
Sbjct: 1029 EDGYNLMHWKLPGQSGISRSVGDFAGRVFEVVSKR-AMRSEPGNMTVADVNVLLDRLAGA 1087
Query: 140 ENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDL 199
AE++ + ++ NA+E+ W++ IILKD+++G +E++ + +HPDAE LF+V+ L
Sbjct: 1088 SGEAEQMPIFDEFYRQMNAEEVMWLVRIILKDMRVGATERTFLNLWHPDAEALFSVSSSL 1147
Query: 200 KLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAWRKL--------HGKEVVI 249
+ VC +L D R ++Q+ I + + + QLA + KL G+E I
Sbjct: 1148 RRVCWELYDPEFRLEQQETGITLMQCFQSQLAQF--QMTTTFDKLVKNLGVTEEGQEFWI 1205
Query: 250 ECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVL-------- 293
E K DG+R+Q+H G ++SR D++ YG ++ EQ+ L
Sbjct: 1206 EEKLDGERMQMHMMEDDTVPGGFRFAFWSRKAKDYTYLYGESLGD--EQSALTRHLRNAF 1263
Query: 294 ---VDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYFAFDVLYVGDT 349
V ILDGEM+ WD +++ FG+ + A + ++ + + Y FD++ + D
Sbjct: 1264 ADGVRNLILDGEMITWDIDIDKMVPFGTLKTAALEQQKNPSKAGPRPLYRVFDIMLLNDK 1323
Query: 350 SVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFF 409
+ +L +R + L++ V RLE L + A + D +E
Sbjct: 1324 PLTEYTLNDRRKALERAVVGVHRRLEILPFER-----------------ATSPDAIEPLL 1366
Query: 410 KETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGG 468
+ + EG+VLK+ S++ R+ W+K+KPEY+ G +D +++GGY+GSGRRGG
Sbjct: 1367 RRVVAEASEGLVLKNPRSRYSLNSRNNDWIKVKPEYMSEFGESMDCVVVGGYFGSGRRGG 1426
Query: 469 EVAQFLVALAE-----RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
++ FL L + +SF +VG GL E+ + + ++ ++
Sbjct: 1427 TLSSFLCGLRVSQNLIESGKAATAEKCLSFFKVGGGLKAEDYAEIRHHTEGKWQDWDAAN 1486
Query: 524 RAPPSFYQVTNNSK----ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 579
PP+ Y + E+PDVWI P S+++S+ + T ++ F+ ++LRFPR
Sbjct: 1487 --PPTEYIELGGGERLQYEKPDVWIR-PSDSVVISVKAASITP-TDQFAMGWTLRFPRFR 1542
Query: 580 RVRYDKPWHDCLDVQSF 596
++R D+ W LD+ F
Sbjct: 1543 KLRLDRTWDSALDMDEF 1559
>gi|296809888|ref|XP_002845282.1| DNA ligase 4 [Arthroderma otae CBS 113480]
gi|238842670|gb|EEQ32332.1| DNA ligase 4 [Arthroderma otae CBS 113480]
Length = 1001
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 185/628 (29%), Positives = 313/628 (49%), Gaps = 64/628 (10%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P +R+ +F+ + V D F A RLI+P DR+R YGLKE + L+ + +
Sbjct: 71 PHELRRNIIERFISRWRQQVGNDIFPAFRLIVPEKDRDRAMYGLKEKAIGKLLVKVMKID 130
Query: 82 KDSADAVRLINWRKGG--AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLAS 138
K+S D L+NW+ G A G+F EV+ +R G ++I ++N LD LA
Sbjct: 131 KNSEDGYNLLNWKLPGQRATAMTGDFAGRCFEVVSKRPMKTEVGDMSIADVNSRLDELAV 190
Query: 139 SENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCD 198
+ E++ +L+ ++ N +E+ W+I IIL+ +K+G +E++ F +HPDAE LFN++
Sbjct: 191 ASKEDEQLPILAEFYRRMNPEELMWLIRIILRQMKVGATERTFFEIWHPDAESLFNISSS 250
Query: 199 LKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLAMRIGDAHAAWRKLHGKEVV-------I 249
L+ VC +L + R + + V + +PQLA H+ + + + I
Sbjct: 251 LRRVCWELYLPSIRLEADEARVTLMQCFQPQLAQ--FQMHSFQKMIERMRLAEDDPQFWI 308
Query: 250 ECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNVL- 293
E K DG+RIQ+H G ++SR D++ YG+ ++++ ++
Sbjct: 309 EEKLDGERIQLHMETNSSVPGGKRFEFWSRKAKDYTYLYGNGFHDENGSLTRHLKNAFAD 368
Query: 294 -VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYF-AFDVLYVGDTS 350
V+ ILDGEM+ WD + FG+ + A A R+ LS+ F FD++Y+ +
Sbjct: 369 GVESIILDGEMITWDPEQDAPVPFGTLKTAALAEQRNPLSTSGHRPLFRIFDIVYLNGKA 428
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
+ +L++R L+ V R E + V + ++E +
Sbjct: 429 LTRYTLRDRRRALEASVVSVHRRFEVHTYE-----------------VGRSASDIEPLLR 471
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGE 469
+ + EG+VLK+ S + +R+ W+K+KP+Y+ G LD +++GGYYGSG+RGG
Sbjct: 472 KVVAEASEGLVLKNPNSPYRLNERNDDWMKVKPDYMTEFGESLDCIVVGGYYGSGKRGGN 531
Query: 470 VAQFLVALAERPAPD---TYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
++ +L L + D T P + SFC+VG G + + + + ++ KR P
Sbjct: 532 ISSYLCGLRVDDSHDQQGTNPMKCYSFCKVGGGFTAADYANIRHHTDGKWHDWD-AKRPP 590
Query: 527 PSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYD 584
F ++ ERPDVWI+ P+ S++L + + T S+ F ++RFPR R+R D
Sbjct: 591 TEFIELAGGDAQYERPDVWIK-PDDSVVLCVKAAAVT-PSDQFRLGLTVRFPRFKRLRMD 648
Query: 585 KPWHDCLDVQSFVELVHSSNGTTQKGKE 612
K W L +Q F++L G Q+ KE
Sbjct: 649 KDWKSALSIQEFMDL---KAGAEQERKE 673
>gi|326481603|gb|EGE05613.1| DNA ligase [Trichophyton equinum CBS 127.97]
Length = 999
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 189/639 (29%), Positives = 316/639 (49%), Gaps = 85/639 (13%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P +R+ +F+ + V D+F A RLI+P DR+R YGLKE + L+ + +
Sbjct: 71 PHELRRNVIERFISRWRQQVGNDFFPAFRLIVPEKDRDRAMYGLKEKAIGKLLVKVMKID 130
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ G A AG+F EV+ +R G ++I ++N LD LA
Sbjct: 131 KNSEDGYNLLNWKLPGQRAATAMAGDFAGRCFEVISKRPLRTEVGDMSIADVNSRLDDLA 190
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
+ E++ +L+ ++ N +EM W+I IIL+ +K+G +E++ F +HPDAE LFN++
Sbjct: 191 VASKEDEQLPILAEFYRRMNPEEMMWLIRIILRQMKVGATERTFFEIWHPDAESLFNISS 250
Query: 198 DLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLA-------------MRIG-DAHAAWRK 241
L+ VC +L + R + + V + +PQLA MR+ D W
Sbjct: 251 SLRRVCWELYLPSIRLEADEARVTLMQCFQPQLAQFQMHSFQKIIERMRLAEDDPQFW-- 308
Query: 242 LHGKEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSK 286
IE K DG+R+Q+H G ++SR +++ YG+ ++S+
Sbjct: 309 -------IEEKLDGERMQLHMETNNSIPGGKRFEFWSRKAKEYTYLYGNGFYDDNGSLSR 361
Query: 287 IIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYF-AFD 342
++ V+ ILDGEM+ WD + FG+ + A A R+ S+ F FD
Sbjct: 362 HLKNAFADGVESIILDGEMITWDPEQDAPVPFGTLKTAALAEQRNPFSASGHRPLFRIFD 421
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
++Y+ + +L++R L+ V P R E + P V +
Sbjct: 422 IVYLNGKPLTRYTLRDRRRALEASVVPVHRRFE-----------IHPYE------VGKSA 464
Query: 403 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYY 461
++E ++ + EG+VLK+ S + +R+ W+K+KP+Y+ G LD +++GGYY
Sbjct: 465 SDIEPLLRKVVAEASEGLVLKNPNSPYRLNERNDDWMKVKPDYMTEFGESLDCIVVGGYY 524
Query: 462 GSGRRGGEVAQFLVALAERPAPDTY------PRRFISFCRVGTGLSDEELDAVVTKLKPY 515
GSG+RGG ++ +L L DT+ P + SFC+VG G + + +
Sbjct: 525 GSGKRGGNISSYLCGLR---VDDTHAEDGANPMKCYSFCKVGGGFTAADYANIRHHTDGK 581
Query: 516 FRKYEYPKRAPPSFYQVT--NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSL 573
+ + P++ P + ++ + ERPDVWI+ P+ SI++ + + T S+ F ++
Sbjct: 582 WHDWN-PQKPPTEYIELAGGDAQHERPDVWIK-PDDSIVVCVKAAAVT-PSDQFRLGLTV 638
Query: 574 RFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKE 612
RFPR R+R DK W L VQ F++L G Q+ KE
Sbjct: 639 RFPRFKRLRMDKDWQSALSVQEFMDL---KAGAEQEKKE 674
>gi|326472379|gb|EGD96388.1| DNA ligase 4 [Trichophyton tonsurans CBS 112818]
Length = 995
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 189/639 (29%), Positives = 316/639 (49%), Gaps = 85/639 (13%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P +R+ +F+ + V D+F A RLI+P DR+R YGLKE + L+ + +
Sbjct: 67 PHELRRNVIERFISRWRQQVGNDFFPAFRLIVPEKDRDRAMYGLKEKAIGKLLVKVMKID 126
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ G A AG+F EV+ +R G ++I ++N LD LA
Sbjct: 127 KNSEDGYNLLNWKLPGQRAATAMAGDFAGRCFEVISKRPLRTEVGDMSIADVNSRLDDLA 186
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
+ E++ +L+ ++ N +EM W+I IIL+ +K+G +E++ F +HPDAE LFN++
Sbjct: 187 VASKEDEQLPILAEFYRRMNPEEMMWLIRIILRQMKVGATERTFFEIWHPDAESLFNISS 246
Query: 198 DLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLA-------------MRIG-DAHAAWRK 241
L+ VC +L + R + + V + +PQLA MR+ D W
Sbjct: 247 SLRRVCWELYLPSIRLEADEARVTLMQCFQPQLAQFQMHSFQKIIERMRLAEDDPQFW-- 304
Query: 242 LHGKEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSK 286
IE K DG+R+Q+H G ++SR +++ YG+ ++S+
Sbjct: 305 -------IEEKLDGERMQLHMETNNSIPGGKRFEFWSRKAKEYTYLYGNGFYDDNGSLSR 357
Query: 287 IIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYF-AFD 342
++ V+ ILDGEM+ WD + FG+ + A A R+ S+ F FD
Sbjct: 358 HLKNAFADGVESIILDGEMITWDPEQDAPVPFGTLKTAALAEQRNPFSASGHRPLFRIFD 417
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
++Y+ + +L++R L+ V P R E + P V +
Sbjct: 418 IVYLNGKPLTRYTLRDRRRALEASVVPVHRRFE-----------IHPYE------VGKSA 460
Query: 403 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYY 461
++E ++ + EG+VLK+ S + +R+ W+K+KP+Y+ G LD +++GGYY
Sbjct: 461 SDIEPLLRKVVAEASEGLVLKNPNSPYRLNERNDDWMKVKPDYMTEFGESLDCIVVGGYY 520
Query: 462 GSGRRGGEVAQFLVALAERPAPDTY------PRRFISFCRVGTGLSDEELDAVVTKLKPY 515
GSG+RGG ++ +L L DT+ P + SFC+VG G + + +
Sbjct: 521 GSGKRGGNISSYLCGLR---VDDTHAEDGANPMKCYSFCKVGGGFTAADYANIRHHTDGK 577
Query: 516 FRKYEYPKRAPPSFYQVT--NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSL 573
+ + P++ P + ++ + ERPDVWI+ P+ SI++ + + T S+ F ++
Sbjct: 578 WHDWN-PQKPPTEYIELAGGDAQHERPDVWIK-PDDSIVVCVKAAAVT-PSDQFRLGLTV 634
Query: 574 RFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKE 612
RFPR R+R DK W L VQ F++L G Q+ KE
Sbjct: 635 RFPRFKRLRMDKDWQSALSVQEFMDL---KAGAEQEKKE 670
>gi|58260492|ref|XP_567656.1| DNA ligase (ATP) [Cryptococcus neoformans var. neoformans JEC21]
gi|338817995|sp|P0CN09.1|DNLI4_CRYNB RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|338817996|sp|P0CN08.1|DNLI4_CRYNJ RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|57229737|gb|AAW46139.1| DNA ligase (ATP), putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 1065
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 213/673 (31%), Positives = 329/673 (48%), Gaps = 95/673 (14%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPN- 101
D + +RL+LP DRER Y LKES+LA C ID L + K S A RLI W++ G +PN
Sbjct: 81 DLYPLIRLLLPDKDRERPVYNLKESMLARCYIDILSLEKHSEAAQRLIKWKQPAGNSPNP 140
Query: 102 AGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSE-NRAEKISVLSTLIKKTNAQE 160
G+F V ++ R + G L+++ +N LLD+LA + + + + +L + + A+E
Sbjct: 141 TGDFAKVCYNEIKARSTVEEGQLSVEAVNMLLDKLAVGKMKQKDYVPILKAINMQCTAEE 200
Query: 161 MKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD--I 218
+WII IILKDL + I E+ + FHPDA DL+NV DLK VC L D R + + +
Sbjct: 201 QEWIIRIILKDLHISIRERGVLSAFHPDAIDLYNVCSDLKRVCWTLYDPGFRLNKNETHL 260
Query: 219 EVGKAVRPQLAMRIGDA---HAAWRKLHGKEVVIECKFDGDRIQIHK--NGSEIHYFSRS 273
E+ + PQL R+ DA + A KE ++E K DG+RIQ+H NG++ Y SR
Sbjct: 261 ELFHSFLPQLCGRMNDASLENIAKAIGAPKEFIMEEKLDGERIQLHMRGNGAQWFYCSRK 320
Query: 274 FLDHSE-YGH-----AMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA 325
D++ YG ++++ I V ILDGEM+VWD + R+ FG+ + A A
Sbjct: 321 AKDYTYLYGAHPGEGSLTRYIATAFQDNVRNVILDGEMMVWDPVVERYLAFGTLKSAALA 380
Query: 326 ARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQ-----KVVKPSKGRLETLVPD 380
FD+L++ D + + L ER LL+ K ++ KGRLE +
Sbjct: 381 FS---------LVKVFDILFLNDHCLSRKRLSERKRLLRSGKIFKNIENYKGRLEFVDEK 431
Query: 381 HGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLK 440
G N ++ ++ + +E + EG+V+K ++ R W+K
Sbjct: 432 RG-----------------KNAKDIREYLERVVETKGEGLVVKKTDVIYQTNSRGYDWIK 474
Query: 441 LKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 499
+KPEY + G +L+VL++GG++G G R G++++ L L E+ D + F+ F R
Sbjct: 475 VKPEYSDQMGENLEVLVLGGWWGKGGRSGKISRLLCGLREQAFDDGTLQDFL-FNRFWNE 533
Query: 500 L-------------------SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN-NSKER 539
L S L K K ++R ++ + PP F ++ ++
Sbjct: 534 LLGLRVDFVSHLMHLRSMRCSPTHLSQCRNKHKKHWRPFD--RSNPPPFMKLGPVGLDDK 591
Query: 540 PDVWIESPEKSIILSITSDIRTIRSEVFSAPY----SLRFPRIDRVRYDKPWHD-CLDVQ 594
PDV+IE PE S ++ + + SE+ A Y +LRFPR + YDK D LD +
Sbjct: 592 PDVYIE-PENSFVIEVKA------SEIVPAGYGIGFTLRFPRCKYIYYDKNSRDYALDDE 644
Query: 595 SFVELVHSSNGTTQKGKEYGGLQD--DKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKG 652
+ T+K + D +PK+ +G P +F +SD
Sbjct: 645 CLWTVGQGFFYKTRKLIKRTDFMDLFSRPKRSYDDSQG--------PGNFRGQKLSDADV 696
Query: 653 ETSIFSDMVFCIL 665
ETSIFSDM F L
Sbjct: 697 ETSIFSDMTFSDL 709
>gi|167515574|ref|XP_001742128.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778752|gb|EDQ92366.1| predicted protein [Monosiga brevicollis MX1]
Length = 998
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 194/627 (30%), Positives = 310/627 (49%), Gaps = 109/627 (17%)
Query: 49 LRLILPSLDRERGSYGLKESVLANCLIDALGMSK-DSADAVRLINWRKGGAAPNAGNFPM 107
+RL+LP LD +RGSY LKE ++ I+ LG++K SADA LINW++ G NAG
Sbjct: 69 MRLLLPHLDLKRGSYNLKEPTISKLYIECLGLNKVTSADAQTLINWKESGGK-NAGVLYK 127
Query: 108 VAAEVLQRRQGMISGGLTIKELNDLLDRLAS----------------------------- 138
+ ++++ R LT++E+N+ LD+LA+
Sbjct: 128 LIGDIMKSRAAA-KPSLTLREINESLDQLAAVGRDRYNRRRPEANDVAGNDPSTGPTGPS 186
Query: 139 ----SENRAEK---ISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAED 191
RA K +VL LIK+ A E +W++ IIL+DLK G + ++F FH AE+
Sbjct: 187 QGPGRRGRASKEGQAAVLDQLIKRATALEHRWLVAIILRDLKCGFKDTTVFSCFHDQAEE 246
Query: 192 LFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRK---------- 241
++ +L+ +C++L H +++ K +RP + + A A K
Sbjct: 247 FYHRNSNLEALCKEL------HGSGHVDLIK-IRPGDSCGVMLAKATRNKDDRGNTLDRL 299
Query: 242 --LHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEY--GHAMSKIIEQNVL---- 293
G ++E K+DG+RI +HK+GS+ YFSR+ D + SK NV
Sbjct: 300 IRSFGDPFLMEIKWDGERIHLHKDGSDCWYFSRNRHDFTNAYCTTDTSKSHWHNVQPAFA 359
Query: 294 --VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLC-----YFAFDVLYV 346
V CILDGEML ++T + N ++ AR ++ + Y +D++Y+
Sbjct: 360 KGVHSCILDGEMLGYNTRTHELVAKDDNFDVKALARPNTETNLKYTHVVPLYLVWDIIYL 419
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
+++ S+ ER LL+ ++P +GRL + + V H D+
Sbjct: 420 NGHNLLDMSMIERRRLLEANIQPVEGRLHIVELE-----------------VGHGKDDFL 462
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSG- 464
+F ++ EG+++K S++ G R G W K KPEY ++ D LD++I+GGY+G G
Sbjct: 463 RFANHVMQQGHEGVIVKRQDSRYCLGQRGGGWWKWKPEYHQSLQDTLDLVIVGGYFGEGS 522
Query: 465 RRGGEVAQFLVALAERPAPDT----YPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
RR G ++ F++A+AE PD P RF S C+VGTG S EL+ V KL P++ K++
Sbjct: 523 RRSGAISHFMLAVAEDRPPDAPAGWKPTRFHSCCKVGTGYSFNELERVRRKLAPHWHKWK 582
Query: 521 YPKRAP----------PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 570
P AP P + N KERPD WI P++SI++ + + I + F+
Sbjct: 583 AP--APGDTLNPCGMGPGVFLAMPNFKERPDYWI-PPDQSIVVEMKA-ASLIETNQFATG 638
Query: 571 YSLRFPRIDRVR-YDKPWHDCLDVQSF 596
+LRFPR+ + R +K W +C +
Sbjct: 639 LTLRFPRLVKFRDSEKDWFECATISDL 665
>gi|358399367|gb|EHK48710.1| hypothetical protein TRIATDRAFT_83609 [Trichoderma atroviride IMI
206040]
Length = 994
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 194/628 (30%), Positives = 318/628 (50%), Gaps = 72/628 (11%)
Query: 19 IQKTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLID 76
+ K P ++R +F+ + V D++ ALRLILP DR+RG YGLKE+ + L+
Sbjct: 83 LTKLSPQEQRRHIVERFITRWRKEVGDDFYPALRLILPDKDRDRGVYGLKENAIGKLLVK 142
Query: 77 ALGMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDL 132
+ + K+S D L++W+ G A AG+F EV+ +R G +T+ E+N
Sbjct: 143 LMKIDKNSEDGYNLLHWKLPGQTTGARLAGDFAGRCFEVISKRPMRTQVGNMTVAEVNHE 202
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDL 192
LD+LA+S AE + + T + NA+E+ W+I IILK +K+G +EK+ + +HPD E L
Sbjct: 203 LDKLAASAGEAENLRIFETFYNRMNAEELMWLIRIILKQMKVGATEKTFLYLWHPDGETL 262
Query: 193 FNVTCDLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLAMRIGDAHAAWRKL-------- 242
F+V+ L+ VC +L D R ++ + + + ++PQLA A+++K+
Sbjct: 263 FSVSSSLRRVCWELYDPEFRLEQDEAGIAPMQCLQPQLAQ--FQMPASFQKMIELLRPTE 320
Query: 243 HGKEVVIECKFDGDRIQI-------HKNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVLV 294
E IE K DG+R+Q+ H G ++SR D++ YG+ + +++N +
Sbjct: 321 DDPEFWIEEKLDGERMQMHMVEDADHPGGRRFCFWSRKAKDYTYLYGNGL---LDENSSL 377
Query: 295 DR------------CILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS----SDRQLCY 338
R ILDGEM+ WD ++++ FG+ + A A + S + + +
Sbjct: 378 TRHLKNAFAPGVRNLILDGEMITWDMAVDKIVPFGTLKTAALAEQSNKSESNAAGHRPLF 437
Query: 339 FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLV 398
FD+LY+ D + +L++R L K VK RLE ++ + R
Sbjct: 438 RVFDILYLNDKQLTQYTLRDRRNALSKAVKSVHRRLE-------IHEYTR---------- 480
Query: 399 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 457
A + D +E +E + N EG+VLK+ S + R+ WLK+KPEY+ G LD +II
Sbjct: 481 AISADAIEPLLREVVANASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCVII 540
Query: 458 GGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 514
GGYYGSG+RGG ++ FL L +P + SF +VG G E+ + +
Sbjct: 541 GGYYGSGKRGGILSSFLCGLRVTQNHIQAGAHPEKCFSFFKVGGGFRTEDYAEIRHRTDG 600
Query: 515 YFRKYEYPKRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 571
+ +++ PK P + ++ ERPD+WI K ++ S+ F+ +
Sbjct: 601 KWMEWD-PKNPPSEYIELGGGDAKQYERPDMWIRP--KDSVVVSVKAASVGPSDQFARGF 657
Query: 572 SLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+LRFPR R+R D+ W L ++ F EL
Sbjct: 658 TLRFPRFRRLRLDRSWDTALSLEEFQEL 685
>gi|388582574|gb|EIM22878.1| ATP-dependent DNA ligase [Wallemia sebi CBS 633.66]
Length = 1135
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 197/598 (32%), Positives = 304/598 (50%), Gaps = 63/598 (10%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESV 69
LVS F+ I K K+ K K D + D+++ LRL++P +RER +G+KE+V
Sbjct: 6 LVSFFDNISTEKDTLKRSRKLEKLFDYHRKQFGNDFYNLLRLMIPERERERSMFGIKEAV 65
Query: 70 LANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNF-----PMVAAEVLQRRQGM-ISGG 123
LA ++ L +SKD D RL++W+ AP AGNF V +V++ R
Sbjct: 66 LAKIYVELLALSKDHKDGHRLLSWK----APTAGNFVSGDFASVLVDVMKNRVSYERKSE 121
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
TI E+ND LD+L+ ++N +K ++ + + E W++ I+LK+LK+ I E+SI
Sbjct: 122 FTIDEVNDKLDQLSRAKNFIQKKDIMKEFARNCDTTEQFWLVRILLKNLKISIRERSILS 181
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAWRK 241
FH DA LF VT DL+ V KL D + R D +++ + +P L R +
Sbjct: 182 HFHRDAYSLFEVTTDLRTVAYKLYDPSIRLHDNDSSVQLFQVFQPMLCKRNVIPQIIKKM 241
Query: 242 LHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKIIEQNV--L 293
V+E K DG+RIQ+HK G++ Y+SR+ D++ YG + + I +
Sbjct: 242 PKSVPFVVEEKMDGERIQLHKKGTKYKYWSRNAKDYTYLYGENPKEGSFTPHIHHSFDDR 301
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIH 353
VD +LDGEML + +++ FG+ + KAA+ ++ + FDVL+V +
Sbjct: 302 VDEIVLDGEMLAYSAAVDTILPFGT---LKKAAKGDINI--HPVFIVFDVLWVNGKDISK 356
Query: 354 QSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETI 413
KER ++ + V P R+E HV W A DE+++ + I
Sbjct: 357 YPFKERQKVGKTVFNPISTRIE----------HVS-----RWE--ATQADELKQSLERII 399
Query: 414 ENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDL-DVLIIGGYYGSGRRGGEVAQ 472
++ EG+V+K S +E G RS +W+KLKP+Y S+ D+L+IGG + S R G ++
Sbjct: 400 ISKGEGLVVKSPLSLYEYGGRSDQWIKLKPDYFDEMSETADLLVIGGNW-SASRNGTIST 458
Query: 473 FLVALA----ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
AL E PD F++F RVGTG + +L+ + +FRK E K P S
Sbjct: 459 LYCALVDDRHETDEPD-----FLTFTRVGTGYTAMDLELI----NQHFRKSETRKYTPAS 509
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSI-TSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
Y E PD+ I+ P+ S ++ I SDI RS + Y+ RFPR R+R DK
Sbjct: 510 VYPGIEIGNETPDIIID-PKDSFVVEIKASDIN--RSVNYPCGYTYRFPRFKRLRLDK 564
>gi|380025428|ref|XP_003696476.1| PREDICTED: DNA ligase 4-like [Apis florea]
Length = 899
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 187/577 (32%), Positives = 297/577 (51%), Gaps = 55/577 (9%)
Query: 43 VDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNA 102
+ +F L+LILP L+R + +Y LKE LA+ I + KDS DA +L ++ + A
Sbjct: 56 ISFFPILKLILPDLERRQEAYNLKEKSLADLYIRVFCLGKDSKDAKKLKQYKAPISKKIA 115
Query: 103 G-NFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE--KISVLSTLIKKTNAQ 159
G +F A +LQ R + T++++N L+ + S +N+A+ K + L+ KTNA
Sbjct: 116 GRDFAEKACCILQNRLPRKNSDFTLEQINLFLNDI-SLKNKADRPKDEIFKFLLGKTNAL 174
Query: 160 EMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIE 219
E+KWI IILK+LKLGI+ K I FHPDA LF+V+ +L+ +CEKL D R+ DI+
Sbjct: 175 ELKWITRIILKNLKLGITSKKILQVFHPDANSLFDVSSNLQHICEKLYDPQLRY-HCDIQ 233
Query: 220 VGKAVRPQLAMR--IGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLD- 276
+ +P L R I D + ++ ++CK+DG+R QIH + YF+R D
Sbjct: 234 IFSHFKPMLLERCQIEDIKKLFN--EKEQYFVQCKYDGERSQIHIKDGKYKYFTRQGYDI 291
Query: 277 --HSEYGHA-----MSKIIEQ--NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR 327
+S +G MS + ++ N V ILDGE++ W G N ++ K +
Sbjct: 292 TNNSGFGKTSSSGFMSSVFDRLLNQEVKSVILDGELMGWHKEKKLLGSKGMNYDVKKLSE 351
Query: 328 DGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHV 387
+ S Q C+ AFD++ D V ++ ++R ++L+ + K +G L
Sbjct: 352 N---SHYQPCFIAFDIIMHNDILVNNEPYEKRLKILENIFKEEEGVLLL----------- 397
Query: 388 RPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYI 446
C S+ +E+ F E+I+N++EGIV+K SK++ + G K+K EY
Sbjct: 398 ------CKSIKVSKSEELCNIFNESIKNKEEGIVVKKCDSKYKLNIKDGTGCYKIKAEYS 451
Query: 447 R-AGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERP-APDTYPRRFISFCRVGTGLSDEE 504
D+D++I+GGYYG G+ G + FL+ +A P P F+S V GLS +E
Sbjct: 452 EDLIQDIDLIILGGYYGDGKFIGSIKSFLMGVASSSKTPGENPIEFLSIVSVSNGLSMDE 511
Query: 505 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRS 564
L + + ++ PP + P++WI PE SIIL++ + T RS
Sbjct: 512 LKELWRIFENKWQTQRPTNVIPPKI--------DLPELWI-CPENSIILTVKASEMT-RS 561
Query: 565 EVFSAPYSLRFPRIDRVRYDKPWHDCL---DVQSFVE 598
+ YSLRFP + +R DKPW++ D+QS ++
Sbjct: 562 SDYPTGYSLRFPEVTNIRTDKPWYNVCTTNDLQSLIK 598
>gi|302891895|ref|XP_003044829.1| hypothetical protein NECHADRAFT_43928 [Nectria haematococca mpVI
77-13-4]
gi|256725754|gb|EEU39116.1| hypothetical protein NECHADRAFT_43928 [Nectria haematococca mpVI
77-13-4]
Length = 991
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 212/698 (30%), Positives = 341/698 (48%), Gaps = 82/698 (11%)
Query: 16 FNWIQKTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANC 73
F + K P ++R +F+ + V D++ ALRLILP DR+RG YGLKE+ +
Sbjct: 77 FRGVNKLSPHEQRRHIIERFIIRWRKEVGPDFYPALRLILPDKDRDRGVYGLKENAIGKL 136
Query: 74 LIDALGMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKEL 129
L+ + + K S D L++W+ G A+ AG+F EV+ +R + G +TI E+
Sbjct: 137 LVKLMKIDKSSEDGYNLLHWKLPGQTTASRLAGDFAGRCFEVISKRPMRTTVGTMTIAEV 196
Query: 130 NDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDA 189
N+ LD+LA+S E + + T NA+E+ W+I I+LK +K+G +EK+ +HPD
Sbjct: 197 NEQLDKLAASTGETENLRIFETFYNHMNAEELMWLIRIVLKQMKVGATEKTFLDLWHPDG 256
Query: 190 EDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLAMRIGDAHAAWRKL----- 242
+ LF+V+ L+ VC +L D R ++ + V + +PQLA A+++K+
Sbjct: 257 DALFSVSSSLRRVCWELSDPEIRLEQDEAGVALLQCFQPQLAQF--QMPASFQKMIQLLR 314
Query: 243 ---HGKEVVIECKFDGDRIQI-------HKNGSEIHYFSRSFLDHSE-YGHAMSKIIEQN 291
E IE K DG+R+Q+ H G ++SR D++ YG + E +
Sbjct: 315 PTEEDPEFWIEEKLDGERMQMHMVEDKKHPGGRRFCFWSRKAKDYTYLYGDGLQD--ENS 372
Query: 292 VL-----------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR----DGLSSDRQL 336
L V ILDGEM+ WD +++ FG+ + A A + D S+ +
Sbjct: 373 SLTRHLKKAFASGVKNLILDGEMITWDMGVDKIVPFGTLKTAALAEQQNKSDTNSAGHRP 432
Query: 337 CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
+ FD+LY+ + + +L++RH L+K VK RLE H S
Sbjct: 433 LFRVFDILYLNNKPLTQYTLRDRHRALEKAVKSVHRRLEI----HNYTS----------- 477
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 455
A D +E +E + N EG+VLK+ S + R+ WLK+KPEY+ G LD +
Sbjct: 478 --ATTSDAIEPLLREVVANASEGLVLKNPRSMYRLNHRNDDWLKVKPEYMSEFGESLDCV 535
Query: 456 IIGGYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 512
IIGGYYGSG+RGG ++ +L L P + SF +VG G E+ + +
Sbjct: 536 IIGGYYGSGKRGGMLSSYLCGLRVTQNHIQAGANPEKCFSFFKVGGGFRAEDYAEIRHRT 595
Query: 513 KPYFRKYEYPKRAPPSFYQVTNNSK----ERPDVWIESPEKSIILSITSDIRTIRSEVFS 568
+ + E+ ++ PPS Y + ERPD+WI K ++ S+ F+
Sbjct: 596 EGKW--IEWDQKNPPSEYIELGGGELRQYERPDMWIRP--KDSVVVSVKAASVGPSDQFA 651
Query: 569 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSR 628
++LRFPR R+R D+ W L ++ F EL + ++ KE +D+ R +
Sbjct: 652 RGFTLRFPRFRRLRLDRTWDTALSLEEFQEL---KDRVDEESKEKAMTVEDRK---RRNP 705
Query: 629 KGEKKNVSIVPSHFLQTDVSDIKGE-TSIFSDMVFCIL 665
K K+ + I + + +GE T +F + FC+L
Sbjct: 706 KRIKRELVIAGE---DSAPVEFEGEKTKLFEGLEFCVL 740
>gi|213405927|ref|XP_002173735.1| DNA ligase [Schizosaccharomyces japonicus yFS275]
gi|212001782|gb|EEB07442.1| DNA ligase [Schizosaccharomyces japonicus yFS275]
Length = 915
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 194/642 (30%), Positives = 320/642 (49%), Gaps = 60/642 (9%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAG 103
D + +RL+LP LDR+R SYG KE L + A +S S DA+ L W K + +G
Sbjct: 65 DLYPMMRLLLPELDRQRNSYGFKEFGLGKLFVRAFHLSPHSEDALALKEW-KSPQSKFSG 123
Query: 104 NFPMVAAEVLQRRQ-GMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMK 162
NF V +V+ RR +I ++N LD ++++ N A K+ VL L + +A E++
Sbjct: 124 NFIAVVQDVINRRALRNYPSTYSIDDVNSFLDDISNAPNEATKVKVLEELYQHMSAIELR 183
Query: 163 WIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQR--HKRQDIEV 220
W++ I+LK + G SE I F+ DA L+ + LK VC +L D N+R K++++ V
Sbjct: 184 WLVPILLKVRRFGTSENFILSVFNIDAARLYRLCSSLKRVCYELHDPNKRLTKKQKEVNV 243
Query: 221 GKAVRPQLAMRIG-DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE 279
+PQLA + +H K IE K DG+RIQ+H ++SR+ + ++
Sbjct: 244 FNCFQPQLANYTKVELKEVVECMHNKPFWIEEKLDGERIQLHYARGNFQFYSRNSFNITD 303
Query: 280 -YGHAMSKI-----------IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR 327
YG + + + ++N V ILDGEM+ WD + +GS + + +
Sbjct: 304 VYGSSYNDVDSKLTKYLIGSFQEN--VREVILDGEMVTWDPIMETVIPYGSLRASSTSTN 361
Query: 328 DGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHV 387
+ S Y FD+L++ S+++ SL+ R ++L KV+ R+ H
Sbjct: 362 EEYS--YYPYYVVFDILFLNGFSLLNYSLESRRKILSKVIISETRRMSV---------HR 410
Query: 388 RPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIR 447
+G VD++++ KET+ + EG+V+K+ S + G+R+ W+K+KP Y+
Sbjct: 411 YTEGS--------TVDDIDRALKETVIEKSEGLVIKNPTSPYTLGERTNDWIKVKPYYME 462
Query: 448 A-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYP-RRFISFCRVGTGLSDEEL 505
G DLD LI+GGYYG G R ++ FL L P +F SF RVG G + +
Sbjct: 463 GFGEDLDCLIMGGYYGRGNR-KHLSSFLCGLRVSKHDSKEPIEQFQSFFRVGGGFTRNDY 521
Query: 506 DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIR 563
++ K + +E+ A ++ + +K +PD+WI P SI+L I + T+
Sbjct: 522 ASIREKTNG--KWHEWNDEA-FQYHILAGATKTVNKPDLWIR-PHDSIVLQIKA-AETVP 576
Query: 564 SEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQK-GKEYGGLQDDKPK 622
++ FS ++LRFPR+ +R DK W L F+ L N +K KE+ + K
Sbjct: 577 TDKFSTGFTLRFPRLQHIRLDKDWRSALTFNEFLAL----NEQAKKIPKEHSRIHRKKKV 632
Query: 623 QFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCI 664
G++K +S P + Q S +K E+++F +F +
Sbjct: 633 VL-----GKRKRMSFPPEY--QQTGSPLKVESNLFEGFLFFV 667
>gi|403172161|ref|XP_003889352.1| hypothetical protein PGTG_21909 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169734|gb|EHS63955.1| hypothetical protein PGTG_21909 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1005
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 184/622 (29%), Positives = 314/622 (50%), Gaps = 61/622 (9%)
Query: 29 RSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAV 88
++ F K+ Y + D + +RL+LP DR R Y LKE L DAL + K ++ A
Sbjct: 67 KALFEKWRKVYGN--DLYPCIRLLLPKHDRNRPMYFLKEFGLGRLYCDALSLDKKTSSAA 124
Query: 89 -RLINWRKGGAAPN-----AGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENR 142
RL++W+ G N AG+F V + + R + L+I ++ND LD LA++ +
Sbjct: 125 KRLLSWKSGAPNQNNNESSAGDFAKVLYKEIDSRSMVAKTLLSIDDINDQLDSLATARSG 184
Query: 143 AEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLV 202
A+++ ++ T ++K ++ W++ IIL+DL+LG+SE + FH +A + +N+ DLK V
Sbjct: 185 AKRLEIVKTWLEKITPKDHLWLLKIILQDLRLGLSESVVLCAFHHNAYEYYNICTDLKTV 244
Query: 203 CEKLKDRN--QRHKRQDIEVGKAVRPQLAMR----IGDAHAAWRKLHGKEVVIECKFDGD 256
C L + + ++ +P L+ R + D KE +IE K DG+
Sbjct: 245 CHTLHSTHIPLEDTQASLKTFNVFKPMLSKRSTKDLPDIVKLMLSGKHKEFLIEEKMDGE 304
Query: 257 RIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKIIEQNV--LVDRCILDGEMLVWDT 308
RIQ+HK+G + ++SRS ++++ YG ++ I V+ ILDGEMLVWD
Sbjct: 305 RIQLHKSGEQYQFWSRSGTNYTDIYGANPTIGCLTPFIHSAFKPAVEDVILDGEMLVWDP 364
Query: 309 SLNRFAEFGSNQEIAKAARDGLSSDRQLCYF-AFDVLYVG------DTSVIHQSLKERHE 361
R FGS + + ++ ++ D F FD+LY+ TS+I++ L ER +
Sbjct: 365 KKKRILPFGSVKSLKPSS---INRDEPRALFKVFDILYLKGKGKPEGTSLINKPLSERRQ 421
Query: 362 LLQ--KVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEG 419
+++ +V K RLE C+S+ + +++ F++ +E EG
Sbjct: 422 VMESGRVFVEIKTRLEF-----------------CYSVRGKDTQDIKASFEKILEESGEG 464
Query: 420 IVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALA 478
+++K L SK+ R+ W K+KP+Y+ G +VL +G ++G G+RGG FLVAL
Sbjct: 465 LIIKRLDSKYRVNARTDDWYKVKPDYMDELGETFEVLAVGAFWGRGKRGGTFGSFLVALV 524
Query: 479 ERPAPDTYPR--RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP---PSFYQVT 533
+ D R+ + CRVGTGL+ +E ++TKL+ + ++ K+ P P + +
Sbjct: 525 DNENSDPLQGIFRYKTLCRVGTGLTTDETTQIMTKLEGKYSNWD--KKRPELNPDWLDIG 582
Query: 534 NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDV 593
S + PDVW + S +L+I I S + +S+RFPR R ++ DC+
Sbjct: 583 KGSGQTPDVWWHWKD-SFVLTIKG-TEIINSYAYGCQFSIRFPRSIRFDMERDIGDCMPY 640
Query: 594 QSFVELVHSSNGTTQKGKEYGG 615
Q + + + + G+ G
Sbjct: 641 QELLGIANQLQDKNKLGENLSG 662
>gi|429860192|gb|ELA34937.1| DNA ligase 4 [Colletotrichum gloeosporioides Nara gc5]
Length = 994
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 211/684 (30%), Positives = 346/684 (50%), Gaps = 70/684 (10%)
Query: 21 KTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDAL 78
K P ++R +F+ + + V D + A RLILP DR+RG YGLKE+ + L+ +
Sbjct: 83 KLSPQEQRRHIIERFISRWRNEVGNDVYPAFRLILPDKDRDRGVYGLKENAIGKLLVKLM 142
Query: 79 GMSKDSADAVRLINWRKGGAAPN---AGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLD 134
+ K+S D L++W+ G AG+F EVL +R G +TI E+N+LLD
Sbjct: 143 KIDKNSEDGYNLLHWKLPGHTTQSRLAGDFAGRCFEVLSKRPMRTEVGDMTIAEVNELLD 202
Query: 135 RLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFN 194
+LA+S E + V T ++ NA+E+ W+I I+LK +K+G +E+++ + +HPD E LF+
Sbjct: 203 KLAASSGELENLEVFETFYERMNAEELMWLIRIVLKQMKVGATERTLLNLWHPDGEALFS 262
Query: 195 VTCDLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLAMRIGDAHAAWRKL--------HG 244
V+ L+ VC +L D R + QD V + +PQLA ++++K+
Sbjct: 263 VSSSLRRVCWELHDPKIRLESQDTGVSLMECFQPQLAQ--FQVPSSFQKMVDYLRPTEDD 320
Query: 245 KEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-----AMSKIIEQN 291
E IE K DG+R+Q+H G Y+SR D++ YG A+S+ + +
Sbjct: 321 PEFWIEEKLDGERMQMHMMEDSSSPGGFRFCYWSRKAKDYTYLYGKDLQEGALSRHLSEA 380
Query: 292 VL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR--DGLSSDRQLCYFAFDVLYVG 347
V ILDGEM+ WD +++ FG+ + A A + + + R L + FD+L +
Sbjct: 381 FTPGVRNLILDGEMITWDPEVDKIMPFGTLKTAALANQEINNTTGPRPL-FRVFDILLLN 439
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
D + +L++RH L+K VK RLE H + P D +E
Sbjct: 440 DQPLTQYTLRDRHRALEKAVKGVHRRLEI----HQYETATSP-------------DAIEP 482
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRR 466
++ + EG+VLK+ S + R+ WLK+KPEY+ G LD ++IGGYYGSGRR
Sbjct: 483 LLRKVVAEASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCVVIGGYYGSGRR 542
Query: 467 GGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
GG ++ FL L P + SF +VG G E+ + + + + ++ K
Sbjct: 543 GGALSSFLCGLRASQNHIQAGANPEKCFSFFKVGGGFKAEDYAEIRHRTEGKWNNWD-SK 601
Query: 524 RAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 581
+ P + ++ +S+ E+PDVWI P S +L + S+ F+ ++LRFPR ++
Sbjct: 602 KPPVEYIELAGDSRQFEKPDVWIR-PRDSFVLEAKA-ASIGGSDQFALGFTLRFPRFRKL 659
Query: 582 RYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSH 641
R DK W++ L VQ F +L + ++ +++ K R + K K+ ++I +
Sbjct: 660 RLDKNWNEGLSVQEFQDLRKRVEAEAK--EKTMSVENRK----RRAPKRIKRELTIAGTE 713
Query: 642 FLQTDVSDIKGETSIFSDMVFCIL 665
T V +T +F + FC+L
Sbjct: 714 --NTPVQFAGEKTKVFEGLEFCVL 735
>gi|242206836|ref|XP_002469273.1| predicted protein [Postia placenta Mad-698-R]
gi|220731733|gb|EED85575.1| predicted protein [Postia placenta Mad-698-R]
Length = 980
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 193/622 (31%), Positives = 312/622 (50%), Gaps = 98/622 (15%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVL 70
VL +LF+ +Q ++ K R+ LD++ + DRER YGLKE L
Sbjct: 43 VLAALFDKLQ----GERRPEKRRRLLDSWFNK--------------DRERAVYGLKEKNL 84
Query: 71 ANCLIDALGMSKDSADAVRLINWRKGGA-APNAGNFPMVAAEVLQRRQGMISGGLTIKEL 129
A I + ++ DA+R++NW++ ++G+FP V EV+ +R ++ G LTI EL
Sbjct: 85 AKIYIKLIPLNPRDPDAIRMLNWKRPTERNQSSGDFPSVLYEVISKRSSVVEGTLTIHEL 144
Query: 130 NDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDA 189
ND LD ++ + + T ++E +WI IILKD+++ + E ++F FHPDA
Sbjct: 145 NDHLDEISKNMGHS------------TTSEEQRWIARIILKDMQISVKETTVFAVFHPDA 192
Query: 190 EDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVI 249
LFN D+K + +L D ++ + V RI D +++ G +I
Sbjct: 193 HALFNTCSDIKKIAWELWDPKRK-------LNDEVHLSPLRRIEDTV---KEMQGSNFII 242
Query: 250 ECKFDGDRIQIHKNGSEIHYFSRSFLDH---SEYGHAMSKIIEQNVL-----------VD 295
E K DG+R+Q+HK G+E Y S S+ + +Y + K + + L VD
Sbjct: 243 EEKLDGERVQLHKRGNEYFYCSSSWATNRKGKDYTYLYGKHVGEGSLTPWIHKAFDARVD 302
Query: 296 RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR--QLCYFAFDVLYVGDTSVIH 353
ILDGEMLVWD R FG+ + AA D +R + C+ FD+LY+ T +++
Sbjct: 303 EIILDGEMLVWDPVSERNLPFGT---LKTAALDRSKKERAPRPCFKIFDLLYLNGTPLLN 359
Query: 354 QSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETI 413
+SLK R L+ +K GR+E V G D+V ++ +
Sbjct: 360 KSLKFRKRNLRACLKEVPGRMEFAVEYEG-----------------RTADDVRTRMEDIM 402
Query: 414 ENRDEGIVLKDLGSKWEPGDRSGKWLK---------LKPEYIRA-GSDLDVLIIGGYYGS 463
+R EG+V+K S++ R+ W+K +KPEY+ + G +DV+++ G YG+
Sbjct: 403 ASRGEGLVIKHPNSQYVLSGRNSDWIKASCWTRGFNVKPEYMDSMGETVDVIVVAGNYGT 462
Query: 464 GRRGGEVAQFLVALAE--RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 521
GRR G V+ + A+ + RPA + P ++ +F R+GTGLS D + + KP+ K
Sbjct: 463 GRRSGGVSTLVCAVVDDRRPADEVEP-KYSTFVRIGTGLS--YADYIWVRQKPW--KTWD 517
Query: 522 PKRAPPSFYQVT-NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDR 580
PK PPSF QV S+++ DV++E P+ S +L I + S+++ ++RFPR +
Sbjct: 518 PKN-PPSFIQVAKKGSEDKGDVYLE-PQDSFLLKIKA-AEITNSDLYHMGVTMRFPRAIQ 574
Query: 581 VRYDKPWHDCLDVQSFVELVHS 602
+R D DC + E + S
Sbjct: 575 IREDLDTSDCTTATAVFESLRS 596
>gi|347800583|dbj|BAK86395.1| DNA ligase 4 [Trichophyton interdigitale]
Length = 999
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 197/697 (28%), Positives = 335/697 (48%), Gaps = 99/697 (14%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P +R+ +F+ + V D+F A RLI+P DR+R YGLKE + L+ + +
Sbjct: 71 PHELRRNVIERFISRWRQQVGNDFFPAFRLIVPEKDRDRAMYGLKEKAIGKLLVKVMKID 130
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ G A AG+F EV+ +R G ++I ++N LD LA
Sbjct: 131 KNSEDGYNLLNWKLPGQRAATAMAGDFAGRCFEVISKRPLRTEVGDMSIADVNSRLDDLA 190
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
+ E++ +L+ ++ N +EM W+I IIL+ +K+G +E++ F +HPDAE LFN++
Sbjct: 191 VASKEDEQLPILAEFYRRMNPEEMMWLIRIILRQMKVGATERTFFEIWHPDAESLFNISS 250
Query: 198 DLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLA-------------MRIG-DAHAAWRK 241
L+ VC +L + R + + V + +PQLA MR+ D W
Sbjct: 251 SLRRVCWELYLPSIRLEADEARVTLMQCFQPQLAQFQMHSFQKIIERMRLAEDDPQFW-- 308
Query: 242 LHGKEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSK 286
IE K DG+R+Q+H G ++SR +++ YG+ ++++
Sbjct: 309 -------IEEKLDGERMQLHMETNNSIPGGKRFEFWSRKAKEYTYLYGNGFYDDNGSLTR 361
Query: 287 IIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYF-AFD 342
++ V+ ILDGEM+ WD + FG+ + A A R+ S+ F FD
Sbjct: 362 HLKNAFADGVESIILDGEMITWDPEQDAPVPFGTLKTAALAEQRNPFSASGHRPLFRIFD 421
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
++Y+ + +L++R L+ V R E + P V +
Sbjct: 422 IVYLNGKPLTRYTLRDRRRALEASVVSVHRRFE-----------IHPYE------VGKSA 464
Query: 403 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYY 461
++E ++ + EG+VLK+ S + +R+ W+K+KP+Y+ G LD +++GGYY
Sbjct: 465 SDIEPLLRKVVAEASEGLVLKNPNSPYRLNERNDDWMKVKPDYMTEFGESLDCIVVGGYY 524
Query: 462 GSGRRGGEVAQFLVALAERPAPDTY------PRRFISFCRVGTGLSDEELDAVVTKLKPY 515
GSG+RGG ++ +L L DT+ P + SFC+VG G + + +
Sbjct: 525 GSGKRGGNISSYLCGLR---VDDTHAEDGANPMKCYSFCKVGGGFTAVDYANIRHHTDGK 581
Query: 516 FRKYEYPKRAPPSFYQVT--NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSL 573
+ + PK+ P + ++ + ERPDVWI+ P+ SI++ + + T S+ F ++
Sbjct: 582 WHDWN-PKKPPTEYIELAGGDAQHERPDVWIK-PDDSIVVCVKAAAVT-PSDQFRLGLTV 638
Query: 574 RFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKK 633
RFPR R+R DK W L VQ F++L + G Q+ K K+F+ KK
Sbjct: 639 RFPRFKRLRMDKDWQSALSVQEFMDL------------KAGAEQEKKEKEFQVDNSRRKK 686
Query: 634 NVSIVPSHFL-----QTDVSDIKGETSIFSDMVFCIL 665
+ +V+ I +T+IF + F ++
Sbjct: 687 IKKSKKKELTVAGSGEANVAYIGRKTNIFDGLSFFVM 723
>gi|302662106|ref|XP_003022712.1| hypothetical protein TRV_03173 [Trichophyton verrucosum HKI 0517]
gi|291186672|gb|EFE42094.1| hypothetical protein TRV_03173 [Trichophyton verrucosum HKI 0517]
Length = 1012
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 198/688 (28%), Positives = 342/688 (49%), Gaps = 81/688 (11%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P +R+ +F+ + V D+F A RLI+P DR+R YGLKE + L+ + +
Sbjct: 67 PHELRRNVIERFISRWRQQVGNDFFPAFRLIVPEKDRDRAMYGLKEKAIGKLLVKVMKID 126
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ G A G+F EV+ +R G ++I ++N LD LA
Sbjct: 127 KNSEDGYNLLNWKLPGQRAATAMTGDFAGRCFEVISKRPLRTEVGDMSIADVNSRLDDLA 186
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
+ ++ +L ++ N +EM W+I IIL+ +K+G +E++ F +HPDAE LFN++
Sbjct: 187 VASKEDAQLPILDEFYRRMNPEEMMWLIRIILRQMKVGATERTFFEIWHPDAESLFNISS 246
Query: 198 DLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLA-------------MRIGDAHAAWRKL 242
L+ VC +L + R + + V + +PQLA MR+ +
Sbjct: 247 SLRRVCWELYLPSIRLEADEARVTLMQCFQPQLAQFQMHSFQKIIERMRLAE-------- 298
Query: 243 HGKEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKI 287
E IE K DG+R+Q+H G ++SR +++ YG+ ++++
Sbjct: 299 DDPEFWIEEKLDGERMQLHMETNSSIPGGKRFEFWSRKAKEYTYLYGNGFYDDNGSLTRH 358
Query: 288 IEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYF-AFDV 343
++ V+ ILDGEM+ WD + FG+ + A A R+ S+ F FD+
Sbjct: 359 LKNAFADGVESIILDGEMITWDPEQDAPVPFGTLKTAALAEQRNPFSASGHRPLFRIFDI 418
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
+Y+ + +L++R L+ V P R E + P V +
Sbjct: 419 VYLNGKPLTRYTLRDRRRALEASVIPVHRRFE-----------IHPYE------VGKSAS 461
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYG 462
++E ++ + EG+VLK+ S + +R+ W+K+KP+Y+ G LD +++GGYYG
Sbjct: 462 DIEPLLRKVVAEASEGLVLKNPNSPYRLNERNDDWMKVKPDYMTEFGESLDCIVVGGYYG 521
Query: 463 SGRRGGEVAQFLVALA--ERPAPD-TYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
SG+RGG ++ +L L + A D T P + SFC+VG G + + + + +
Sbjct: 522 SGKRGGNISSYLCGLRVDDTHAEDGTNPMKCYSFCKVGGGFTAADYANIRHHTDGKWHDW 581
Query: 520 EYPKRAPPSFYQVT--NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 577
PK+ P + ++ + ERPDVWI+ P+ S+++ + + T S+ F ++RFPR
Sbjct: 582 N-PKKPPTEYIELAGGDAQHERPDVWIK-PDDSVVVCVKAAAVT-PSDQFRLGLTVRFPR 638
Query: 578 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 637
R+R DK W L VQ F++L G Q+ KE D+ + + +++ +KK +++
Sbjct: 639 FKRLRMDKDWQSALSVQEFIDL---KAGAEQEKKEKDFQVDN--SRRKKTKRSKKKELTV 693
Query: 638 VPSHFLQTDVSDIKGETSIFSDMVFCIL 665
V S + +V+ + +T IF + FC L
Sbjct: 694 VGSG--EPNVAYVGSKTHIFDGLSFCGL 719
>gi|357609382|gb|EHJ66418.1| putative DNA ligase IV [Danaus plexippus]
Length = 1298
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 196/654 (29%), Positives = 317/654 (48%), Gaps = 57/654 (8%)
Query: 31 KFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRL 90
K+ + L Y ++ +F LRL+LPS DRERG Y LKE+ L+ L+ L ++K+S DA +L
Sbjct: 466 KYNRML-KYLENSTFFPILRLLLPSCDRERGPYNLKETRLSTLLVKVLSLNKESTDAKQL 524
Query: 91 INWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSEN--RAEKISV 148
I++ + +FP VA V+++R G + LT++E+N++L+ +A+ +N + +
Sbjct: 525 IHFSSSNNSVLDSDFPGVAFYVIKKRVGQNNSVLTVREINEILNSVATVDNVHKTPLDEI 584
Query: 149 LSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKD 208
S +KK A E KW++ IILKDLKL +S I FHPDA ++F + VCE+L+D
Sbjct: 585 FSYALKKLTAIEFKWLLRIILKDLKLSMSADRILGIFHPDAPEVFKNCSSILKVCEELED 644
Query: 209 RNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIH 268
+ R + + AVRP L+ R+ H K +E KFDG+R Q+H + +
Sbjct: 645 GDTRPSELGVNLFYAVRPMLSERLDITHIHVLD-KTKTYCMEEKFDGERFQMHMDNNVFE 703
Query: 269 YFSRSFLDHSE-YGHAMSKIIEQNVLVD-------RCILDGEMLVWDTSLNRFAEFGSNQ 320
YFSR +S+ YG + + L D ILDGEM+ W N F +
Sbjct: 704 YFSRKGFKYSKNYGQSYDSGMLTPYLKDIFAPEARNFILDGEMMGWHKIDNYFGCKAMSY 763
Query: 321 EIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQ------SLKERHELLQKVVKPSKGRL 374
++ K + S + C+ FD+LY D +I L+ER ++L + +G +
Sbjct: 764 DVKKITEN---SSFRPCFCVFDILYYNDRPLIGSPDKGGLPLRERLKILDDLFIDKRGVI 820
Query: 375 ETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDR 434
E H ++ E VD V + I+N+DEGIV+KD+ S + R
Sbjct: 821 E-----HSKRKIIKESSEV--------VDAV----NDAIDNQDEGIVVKDINSYYIANKR 863
Query: 435 SGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISF 493
+ W K+KPEY +DLD++++G + +R G F VA + D +
Sbjct: 864 NAGWYKIKPEYTDDTMNDLDLVVVGADEATNKRQGRAKSFYVACGDNNDGDPV---WTCI 920
Query: 494 CRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIIL 553
RV GL EE + V + L+ + Y K+ PP + K++PD WI PE SI+L
Sbjct: 921 GRVSNGLKHEEKERVCSLLERNWCMYR--KKPPPPCLRF---GKDKPDFWI-LPEHSIVL 974
Query: 554 SITSDIRTIRSEVFSA--PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 611
+ + +E+ S + LRFPR++ +R DKP D + +L S + ++
Sbjct: 975 QVRA------TELLSVGDSHVLRFPRVEDIRSDKPVDDVCTIHELRQLAVSRSPVSKLST 1028
Query: 612 EYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ ++ ++G K V V F + D++ + C+L
Sbjct: 1029 KRVNESQIDQNYIKTRKRGLSKTVQ-VAEKFRTKTIGDVQVISRALFGKKLCVL 1081
>gi|440637168|gb|ELR07087.1| hypothetical protein GMDG_08264 [Geomyces destructans 20631-21]
Length = 1002
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 183/616 (29%), Positives = 298/616 (48%), Gaps = 62/616 (10%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P +R +F+ + V D++ ALRLI+P DR+R YGLKE + L+ + ++
Sbjct: 88 PHGVRRIIIERFISRWRSEVGHDFYPALRLIIPEKDRDRAMYGLKEKTIGRLLVKLMKIN 147
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ G A+ AG+F EVL +R S G + I E+N LLD+L+
Sbjct: 148 KNSEDGYNLLNWKLPGQTFASRMAGDFAGRCFEVLSKRPMRTSMGNMRIAEVNQLLDQLS 207
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
S+ ++ + + NA E+ W+I +IL+ +K+G SEK+ +HPD E LFNV+
Sbjct: 208 SAPKEEAQLPIFQIFYNRMNADELMWLIRVILRQMKVGASEKTFLDLWHPDGETLFNVSS 267
Query: 198 DLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAWRKLHG-------KEVV 248
L+ VC +L D + R + + + + + +PQLA H+ R + E
Sbjct: 268 SLRRVCWELTDPSIRLEGNETGVTLMQCFQPQLAQ--FQMHSFHRMVDNMRPTPEDTEFW 325
Query: 249 IECKFDGDRIQIH-------KNGSEIHYFSRSFLDHS---------EYGHAMSKIIEQ-N 291
IE K DG+R+Q+H G ++SR D++ E G S + + +
Sbjct: 326 IEEKLDGERMQMHMVEDDSVPGGRRFGFWSRKAKDYTYLYGSGFEDENGAITSHLKKAFD 385
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYF-AFDVLYVGDT 349
V ILDGEM+ WD + FG+ + A R+ + + F FD++Y+ D
Sbjct: 386 SGVRNLILDGEMITWDPEADIMVPFGTLKTAALSEQRNPFAGNGPRPLFRIFDIIYLNDE 445
Query: 350 SVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFF 409
+ +L++R L++ + R E H NS AH+V+ +E
Sbjct: 446 PLTQYTLRDRRRALERCITNVHRRFEV----HSYNS-------------AHSVEAIEPLL 488
Query: 410 KETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGG 468
++ + EG+VLK+ S + R+ W+K+KPEY+ G LD ++IGGYYGSG RGG
Sbjct: 489 RKVVAEASEGLVLKNPRSIYRLNSRNDDWMKVKPEYMTGFGESLDCIVIGGYYGSGHRGG 548
Query: 469 EVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA 525
++ FL L P + SF +VG G E+ + + + ++ P++
Sbjct: 549 RLSSFLCGLRVDQNHIQKGADPMKCYSFFKVGGGFKAEDYANIRHHTENKWVDWD-PRKP 607
Query: 526 PPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 583
P ++ ERPDVWI + ++ + S+ F +LRFPR +R
Sbjct: 608 PIPLIELAGGEAQFERPDVWIRPCDSVVVSVKAA--SVCASDSFRVGLTLRFPRFKHLRM 665
Query: 584 DKPWHDCLDVQSFVEL 599
D+ W L +Q F++L
Sbjct: 666 DRDWSTSLSIQEFIDL 681
>gi|340713799|ref|XP_003395423.1| PREDICTED: DNA ligase 4-like [Bombus terrestris]
Length = 897
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 209/665 (31%), Positives = 314/665 (47%), Gaps = 70/665 (10%)
Query: 27 KKRSKFRKFLDTYCD-SVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSA 85
K R+ R+ Y D V F LRLILP L+RER +Y LKE LAN I K+S
Sbjct: 42 KCRNMGRELKTEYPDMDVSLFPILRLILPDLEREREAYNLKEKSLANLYIRIFCFGKNSK 101
Query: 86 DAVRLINWRKGGAAPNAGN-----FPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSE 140
DA++L ++ P A N F A VL+ R +TI+++N +LD L+
Sbjct: 102 DAIKLKQYK----TPTAKNIIRRDFADRAYSVLKNRFQYEGPHITIEQINFILDNLSLKR 157
Query: 141 NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLK 200
N K L++K+NA E KWI IILK L LGI K I FHPDA LFNV+ +L+
Sbjct: 158 NETFK-----DLLRKSNALEFKWITRIILKSLNLGIGTKKILQVFHPDANSLFNVSSNLR 212
Query: 201 LVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQI 260
+C+ L D R+ DI+V +P L + GKE ++CK+DG+R QI
Sbjct: 213 QICDTLYDPQLRY-HHDIQVFSHFKPMLLEECQIENVKKLFNGGKEYFVQCKYDGERSQI 271
Query: 261 HKNGSEIHYFSRSFLDHSE---YGHAMSKIIEQNVL-------VDRCILDGEMLVWDTSL 310
H + YF+R D + +G S V V ILDGE++ W
Sbjct: 272 HMKDGKYKYFTRQGYDITNKPGFGETTSAGFMSGVFGRLLNPQVKSVILDGELMGWHKER 331
Query: 311 NRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPS 370
G N ++ K ++D S Q C+ AFD++ D + ++ ++R E+L+ V K
Sbjct: 332 KLLGSKGMNYDVKKLSKD---SPYQQCFVAFDIIMHNDILLNNEPYEKRLEILKDVFKEE 388
Query: 371 KGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWE 430
+G L C S +++ + F E+I N++EGIV+K SK++
Sbjct: 389 EGCLLL-----------------CKSTRVSKSEKLCEIFNESIRNKEEGIVVKKCDSKYK 431
Query: 431 PGDRSGK-WLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERP-APDT 485
P R+G K+K EY +G D+D++I+GGYY + G V FL+ +A P
Sbjct: 432 PNVRNGTDCYKIKAEY--SGDLVHDIDLIILGGYYNK-KFMGLVNSFLMGVASSTKTPGE 488
Query: 486 YPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE 545
P +F+S V +GLS L + K ++ PP K P+VWI
Sbjct: 489 NPTKFLSVVSVSSGLSMNTLKELGKMFKDKWQTERPENVIPP---------KVEPNVWIR 539
Query: 546 SPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNG 605
PE SIIL+I + I S + YSLRFPR+ VR DKPW+D + L+ +
Sbjct: 540 -PEDSIILTIKAS-EMICSNNYPTGYSLRFPRVTSVREDKPWYDVCTTDNLKLLIKDTQP 597
Query: 606 T---TQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGE--TSIFSDM 660
T++ Y +++ + + K +K+ + ++ ++ D T +F D
Sbjct: 598 IQKLTKREISYEDIEEAHESKVQEESKTKKQRLIKYEEKSMKPNIYDNPPVYLTRLFDDK 657
Query: 661 VFCIL 665
C++
Sbjct: 658 EICVI 662
>gi|383852714|ref|XP_003701870.1| PREDICTED: DNA ligase 4-like [Megachile rotundata]
Length = 894
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 187/575 (32%), Positives = 279/575 (48%), Gaps = 47/575 (8%)
Query: 43 VDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNA 102
V + +RLILP L+RER + LKE LA I + K+S DA L ++ G +A
Sbjct: 54 VSLYPIMRLILPHLERERRPHNLKEKSLAALYIRVFCLGKNSRDAKELTQYKAPGRKRSA 113
Query: 103 G-NFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEM 161
G +F A +L++ S I+++N LD + S K V L+K+ NA E
Sbjct: 114 GRDFAGRAYYILKKHLPCDSSNFKIEQINKFLDDI--SVQNGTKDQVFKILLKQINALEF 171
Query: 162 KWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVG 221
KWI II+KDLKLG+ I FHPDA LF V+ +L+ VC+ L D + R+ I+V
Sbjct: 172 KWITRIIVKDLKLGMGTTKILQVFHPDANGLFEVSSNLRKVCDTLYDPHLRYD-HSIQVF 230
Query: 222 KAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLD---HS 278
+P L R KE ++ K+DG+R Q+H + YF+R D +S
Sbjct: 231 SHFKPMLLERYKIEDVEKLFASNKEYFVQNKYDGERSQMHMKDGKYKYFTRQGFDITNNS 290
Query: 279 EYGHAMSKIIEQNV----LVDRC---ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS 331
YG S +V L +C ILDGE++ W F G + ++ K + +
Sbjct: 291 SYGKDSSSGFMSSVFGRLLNPQCKSIILDGELMGWHKEKKLFGSKGMSFDVKKLSEN--- 347
Query: 332 SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
S Q C+ AFD++ DT + + +R E+L+ K +G L
Sbjct: 348 SHHQPCFVAFDIIMYNDTLLDKEPYSKRLEILKDAFKEEEGCLIL--------------- 392
Query: 392 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYI-RAG 449
C N +E+ K F E+I N++EGIVLK+ +K++P R G K+K E+
Sbjct: 393 --CKFNKISNSEELRKVFNESIRNKEEGIVLKECNNKYKPNVRDGSGCYKIKAEFSDDLV 450
Query: 450 SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPA-PDTYPRRFISFCRVGTGLSDEELDAV 508
D+D++I+GGYYG GR G + FL+ +A A P P F + V +GL E L +
Sbjct: 451 QDVDLIILGGYYGEGRCIGLMKSFLMGVASPSAVPGENPSEFFAVVSVSSGLIMEALKDI 510
Query: 509 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS 568
K ++ PP +E PD WI PE SIIL+I + T+ ++ +
Sbjct: 511 WEMFKEKWQTTCPANVIPP--------KRELPDKWIR-PEDSIILTIRASEMTVSND-YP 560
Query: 569 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSS 603
YSLRFPR+ +VR DKPW+ + + L+ +
Sbjct: 561 TGYSLRFPRVMQVRTDKPWYSVCTTKELLSLIKDT 595
>gi|154283321|ref|XP_001542456.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410636|gb|EDN06024.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 972
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 186/613 (30%), Positives = 317/613 (51%), Gaps = 57/613 (9%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++R ++F+ + V D F A RLI+P DR+R YGLKE + L+ + +
Sbjct: 80 PQERRRDIIQRFISRWRKEVGDDIFPAFRLIIPEKDRDRAMYGLKEKAIGKLLVKVMKID 139
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ G A+ AG+F EV+ +R G +TI E+N+ LD+L+
Sbjct: 140 KNSEDGFSLLNWKVPGQSFASRMAGDFAGRCFEVISKRPLRTEVGDMTIDEVNEQLDKLS 199
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
++ E++ +L+ ++ N +E+ W+I IIL+ +K+G +E++ F +HPDAE LF+++
Sbjct: 200 AASKEDEQVPILAYFYRRMNPEELMWLIRIILRQMKVGATERTFFSIWHPDAEALFSISS 259
Query: 198 DLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLA-MRIGDAHAAWRKLHGKE----VVIE 250
L+ VC +L + + R + + +V + +PQLA ++ R++ E IE
Sbjct: 260 SLRRVCWQLYNTDVRLEGDETKVTLMQCFQPQLAQFQMQSFEHMIRRMRLTEDDPTFWIE 319
Query: 251 CKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNVL-- 293
K DG+RIQ+H G ++SR +++ YG+ A+++ ++
Sbjct: 320 EKLDGERIQLHMKPDDSIPGGKRFGFWSRKAKEYTYLYGNGLLDENGALTRHLQDAFADG 379
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYFAFDVLYVGDTSVI 352
V ILDGEM+ WD + FG+ + A A R+ S+ ++ + FD+LY+ +
Sbjct: 380 VQSIILDGEMITWDPEHDAIVPFGTLKTAALAEQRNPFSTGQRPLFRIFDILYLNGRPLT 439
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
+LK+R + L+ V P R E D + H+ +++ ++
Sbjct: 440 RYTLKDRRKALEASVIPVHRRFEIHTYD-----------------IGHSATDIDPLLRKV 482
Query: 413 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVA 471
+ EG+VLK+ S + +R W+K+KPEY+ G LD ++IGGYYGSGRRGG ++
Sbjct: 483 VAEASEGLVLKNPNSPYRLNERHDDWMKVKPEYMTDFGESLDCIVIGGYYGSGRRGGALS 542
Query: 472 QFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
FL L +P + SFC+VG G + + + + ++ PKR P
Sbjct: 543 SFLCGLRVDGSHSKTGDHPTKCYSFCKVGGGFTAADYANIRHHTDGKWMDWD-PKRPPTE 601
Query: 529 FYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
+ ++ ERPDVWI+ PE S++L + + T ++ F ++RFPR R+R DK
Sbjct: 602 YIELAGGDLQYERPDVWIK-PEDSVVLCVKASSVT-STDQFRLGLTVRFPRFKRLRMDKD 659
Query: 587 WHDCLDVQSFVEL 599
W L +Q F++L
Sbjct: 660 WRSALSIQEFMDL 672
>gi|325091236|gb|EGC44546.1| DNA ligase [Ajellomyces capsulatus H88]
Length = 1023
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 188/622 (30%), Positives = 316/622 (50%), Gaps = 75/622 (12%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++R ++F+ + V D F A RLI+P DR+R YGLKE + L+ + +
Sbjct: 80 PQERRRDIIQRFISRWRKEVGDDIFPAFRLIIPEKDRDRAMYGLKEKAIGKLLVKVMKID 139
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ G A+ AG+F EV+ +R G +TI E+N+ LD+L+
Sbjct: 140 KNSEDGFSLLNWKVPGQSFASRMAGDFAGRCFEVISKRPLRTEVGDMTIDEVNEQLDKLS 199
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
++ E++S+L+ ++ N +E+ W+I IIL+ +K+G +E++ F +HPDAE LF+++
Sbjct: 200 AASKEDEQVSILAYFYRRMNPEELMWLIRIILRQMKVGATERTFFSIWHPDAEALFSISS 259
Query: 198 DLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLA-------------MRIG-DAHAAWRK 241
L+ VC +L + + R + + +V + +PQLA MR+ D W
Sbjct: 260 SLRRVCWQLYNPDVRLEGDETKVTLMQCFQPQLAQFQMQSFEHMIKRMRLAEDDPTFW-- 317
Query: 242 LHGKEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSK 286
IE K DG+RIQ+H G ++SR +++ YG+ A+++
Sbjct: 318 -------IEEKLDGERIQLHMKPDDSIPGGKRFGFWSRKAKEYTYLYGNGLLDENGALTR 370
Query: 287 IIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYFAFDV 343
++ V ILDGEM+ WD + FG+ + A A R+ S+ ++ + FD+
Sbjct: 371 HLQDAFADGVQSIILDGEMITWDPEHDAIVPFGTLKTAALAEQRNPFSTGQRPLFRIFDI 430
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
LY+ + +LK+R + L+ V P R E D + H+
Sbjct: 431 LYLNGRPLTRYTLKDRRKALEASVIPVHRRFEIHTYD-----------------IGHSAA 473
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYG 462
+++ ++ + EG+VLK+ S + +R W+K+KPEY+ G LD ++IGGYYG
Sbjct: 474 DIDPLLRKVVAEASEGLVLKNPNSPYRLNERHDDWMKVKPEYMTEFGESLDCIVIGGYYG 533
Query: 463 SGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
SGRRGG ++ FL L +P + SFC+VG G + + + + +
Sbjct: 534 SGRRGGALSSFLCGLRVDGSHSKTGDHPTKCYSFCKVGGGFTAADYANIRHHTDGKWMDW 593
Query: 520 EYPKRAPPSFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 577
+ PKR P + ++ ERPDVWI+ PE S++L + + ++ F ++RFPR
Sbjct: 594 D-PKRPPTEYIELAGGDLQYERPDVWIK-PEDSVVLCVKAS-SVSSTDQFRLGLTVRFPR 650
Query: 578 IDRVRYDKPWHDCLDVQSFVEL 599
R+R DK W L +Q F++L
Sbjct: 651 FKRLRMDKDWRSALSIQEFMDL 672
>gi|406867348|gb|EKD20386.1| DNA ligase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 995
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 198/680 (29%), Positives = 344/680 (50%), Gaps = 64/680 (9%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++++ +F+ + V D++ A+RLILPS DR+R YGLKE + ++ +G++
Sbjct: 85 PHERRKNIIEQFVSRWRSEVGKDFYPAIRLILPSRDRDRPMYGLKEKSIGKLVVKMVGLN 144
Query: 82 KDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLASS 139
S DA+ L +W++ A+ NAG+F EVL +R G + I E+N LLD+LA+
Sbjct: 145 SRSEDAMNLTDWKRINSASKNAGDFAGRCYEVLSKRSMRTQVGNMRIAEVNALLDQLAAV 204
Query: 140 ENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDL 199
A+++ + + NA+E+ W+I IIL+ +K+G +EK++ +HPD + LFNV+ L
Sbjct: 205 SKEADQLPLFEKFYSRMNAEELMWLIRIILRQMKIGATEKTVLDVWHPDGDALFNVSSSL 264
Query: 200 KLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAW-RKLHGKEVV-------I 249
+ VC +L D N +D I++ +PQLA + K+ +E I
Sbjct: 265 RRVCWELVDPNIDLGTEDKGIQIMSCFQPQLAQFQSHSFPVMLAKMQLEEDAEGTNTFWI 324
Query: 250 ECKFDGDRIQIHKNGS-----EIHYFSRSFLD--------HSEYGHAMSKIIEQNV--LV 294
E K DG+R+Q+H + ++SR D H + A+++ I+ V
Sbjct: 325 EEKLDGERMQMHMDTGPDGKRRFAWYSRKATDYTYLYGSSHDDDNSALARFIDGAFKKKV 384
Query: 295 DRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG---LSSDRQLCYFAFDVLYVGDTSV 351
ILDGEM+ W+ ++ FG+ + AK+ R+ + + + FD LY+ +
Sbjct: 385 RNIILDGEMITWNMDADKVVAFGTLKTAAKSERNNPYQADTGNRPLFRVFDCLYLNHKPI 444
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+L+ER+ L+ ++ RLE + H S + Q + +E+ ++
Sbjct: 445 TMYTLRERYRALESSIQNVNRRLE--IHTHATASELGGQ------------EAIEEQLRD 490
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEV 470
I+ EG+VLK+ S + +R+ W+K+KPEY+ G LD+++IGGYYG G RGG++
Sbjct: 491 VIDKGHEGLVLKNPNSAYSLNERNNMWMKVKPEYMTEFGESLDLIVIGGYYGGGHRGGKL 550
Query: 471 AQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
A FL L ++ A + P + SFC+VG G E+ + + + + R P
Sbjct: 551 ASFLCGLRVNQDQIARGSNPMKCFSFCKVGGGFRGEDYAKIYHQTDGKWIPWN-DMRPPK 609
Query: 528 SFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
+ ++ K E+PDVWI+ P SI+L + + + S+ F Y+LRFPR R++ +K
Sbjct: 610 EYIRLGGGEKQYEKPDVWIK-PCDSIVLEVKAASVGV-SDRFGTKYTLRFPRFRRLKDEK 667
Query: 586 PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQT 645
W L + F E+ Q +E ++ K + R +++ +K+ ++T
Sbjct: 668 SWEQALSMDEFDEV-------KQNAEEESKTKEIKVENRRKTKRLKKEYRIAGNDSKIKT 720
Query: 646 DVSDIKGETSIFSDMVFCIL 665
+ K T IF + FC++
Sbjct: 721 PYAGPK--TKIFEGLNFCVM 738
>gi|225561792|gb|EEH10072.1| DNA ligase [Ajellomyces capsulatus G186AR]
Length = 961
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 188/622 (30%), Positives = 316/622 (50%), Gaps = 75/622 (12%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++R ++F+ + V D F A RLI+P DR+R YGLKE + L+ + +
Sbjct: 80 PQERRRDIIQRFISRWRKEVGDDIFPAFRLIIPEKDRDRAMYGLKEKAIGKLLVKVMKID 139
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ G A+ AG+F EV+ +R G +TI E+N+ LD+L+
Sbjct: 140 KNSEDGFSLLNWKVPGQSFASRMAGDFAGRCFEVISKRPLRTEVGDMTIDEVNEQLDKLS 199
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
++ E++ +L+ ++ N +E+ W+I IIL+ +K+G +E++ F +HPDAE LF+++
Sbjct: 200 AASKEDEQVPILAYFYRRMNPEELMWLIRIILRQMKVGATERTFFSIWHPDAEALFSISS 259
Query: 198 DLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLA-------------MRIG-DAHAAWRK 241
L+ VC +L + + R + + +V + +PQLA MR+ D W
Sbjct: 260 SLRRVCWQLYNPDVRLEGDETKVTLMQCFQPQLAQFQMQSFEHMIKRMRLAEDDPTFW-- 317
Query: 242 LHGKEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSK 286
IE K DG+RIQ+H G ++SR +++ YG+ A+++
Sbjct: 318 -------IEEKLDGERIQLHMKPDDSIPGGKRFGFWSRKAKEYTYLYGNGLLDENGALTR 370
Query: 287 IIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYFAFDV 343
++ V ILDGEM+ WD + FG+ + A A R+ S+ ++ + FD+
Sbjct: 371 HLQDAFADGVQSIILDGEMITWDPEHDAIVPFGTLKTAALAEQRNPFSTGQRPLFRIFDI 430
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
LY+ + +LK+R + L+ V P R E D + H+
Sbjct: 431 LYLNGRPLTRYTLKDRRKALEASVIPVHRRFEIHTYD-----------------IGHSAA 473
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYG 462
+++ ++ + EG+VLK+ S + +R W+K+KPEY+ G LD ++IGGYYG
Sbjct: 474 DIDPLLRKVVAEASEGLVLKNPNSPYRLNERHDDWMKVKPEYMTEFGESLDCIVIGGYYG 533
Query: 463 SGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
SGRRGG ++ FL L +P + SFC+VG G + + + + +
Sbjct: 534 SGRRGGALSSFLCGLRVDGSHSKTGDHPTKCYSFCKVGGGFTAADYANIRHHTDGKWMDW 593
Query: 520 EYPKRAPPSFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 577
+ PKR P + ++ ERPDVWI+ PE S++L + + T ++ F ++RFPR
Sbjct: 594 D-PKRPPTEYIELAGGDLQYERPDVWIK-PEDSVVLCVKASSVT-STDQFRLGLTVRFPR 650
Query: 578 IDRVRYDKPWHDCLDVQSFVEL 599
R+R DK W L +Q F++L
Sbjct: 651 FKRLRMDKDWRSALSIQEFMDL 672
>gi|239613091|gb|EEQ90078.1| DNA ligase 4 [Ajellomyces dermatitidis ER-3]
Length = 1037
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 185/613 (30%), Positives = 320/613 (52%), Gaps = 57/613 (9%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++R ++F+ + V D F A RLI+P DR+R YGLKE + L+ + +
Sbjct: 81 PQERRRDIIQRFISRWKKEVGDDIFPAFRLIIPEKDRDRAMYGLKEKAIGKLLVKVMKID 140
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ G A+ AG+F EV+ +R G +TI+E+N+ LD+L+
Sbjct: 141 KNSEDGFSLLNWKVPGQIFASRMAGDFAGRCFEVISKRPLRTEVGDMTIEEVNEQLDKLS 200
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
++ E++ +L+ + N +E+ W+I IIL+ +K+G +E+++F+ +HPDAE LF+++
Sbjct: 201 AASKEDEQVPILAYFYRMMNPEELMWLIRIILRQMKVGATERTLFNIWHPDAEALFSISS 260
Query: 198 DLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLA-MRIGDAHAAWRKLHGKE----VVIE 250
L+ VC +L + + R + + +V + +PQLA ++ +K+ E IE
Sbjct: 261 SLRRVCWELYNPDIRLEGDEAKVTLMQCFQPQLAQFQMQSFERMIQKMRLAEDDPTFWIE 320
Query: 251 CKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNVL-- 293
K DG+R+Q+H G ++SR +++ YG+ A+++ +++
Sbjct: 321 EKLDGERMQLHMESDDSIPGGKRFVFWSRKAKEYTYLYGNGFFDENGALTRHLQKAFADG 380
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYFAFDVLYVGDTSVI 352
V ILDGEM+ WD + FG+ + A A R+ S+ ++ + FD+L++ +
Sbjct: 381 VQSIILDGEMITWDPEHDAIVPFGTLKSAALAEQRNPFSTGQRPLFRIFDILFLNGQPLT 440
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
+LK+R L+ V P R E + + H+ ++E ++
Sbjct: 441 RYTLKDRRRALEASVIPVHRRFEIHTYE-----------------IGHSAADIEHLLRKV 483
Query: 413 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVA 471
+ EG+VLK+ S + +R W+K+KPEY+ G LD ++IGGYYGSGRRGG ++
Sbjct: 484 VAEASEGLVLKNPNSPYRLNERHDDWMKVKPEYMTEFGESLDCIVIGGYYGSGRRGGALS 543
Query: 472 QFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
FL L +P + SFC+VG G + + + + ++ PKR P
Sbjct: 544 SFLCGLRVDESHAKKGDHPTKCYSFCKVGGGFTAADYANIRHHTDGKWIDWD-PKRPPTE 602
Query: 529 FYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
+ ++ ERPDVWI+ PE S++L + + T ++ F ++RFPR R+R DK
Sbjct: 603 YIELAGGDLQYERPDVWIK-PEDSVVLCVKASSVT-PTDQFRLGLTVRFPRFKRLRMDKD 660
Query: 587 WHDCLDVQSFVEL 599
WH L +Q F++L
Sbjct: 661 WHSALSIQEFMDL 673
>gi|327354849|gb|EGE83706.1| DNA ligase [Ajellomyces dermatitidis ATCC 18188]
Length = 1037
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 185/613 (30%), Positives = 320/613 (52%), Gaps = 57/613 (9%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++R ++F+ + V D F A RLI+P DR+R YGLKE + L+ + +
Sbjct: 81 PQERRRDIIQRFISRWKKEVGDDIFPAFRLIIPEKDRDRAMYGLKEKAIGKLLVKVMKID 140
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ G A+ AG+F EV+ +R G +TI+E+N+ LD+L+
Sbjct: 141 KNSEDGFSLLNWKVPGQSFASRMAGDFAGRCFEVISKRPLRTEVGDMTIEEVNEQLDKLS 200
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
++ E++ +L+ + N +E+ W+I IIL+ +K+G +E+++F+ +HPDAE LF+++
Sbjct: 201 AASKEDEQVPILAYFYRMMNPEELMWLIRIILRQMKVGATERTLFNIWHPDAEALFSISS 260
Query: 198 DLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLA-MRIGDAHAAWRKLHGKE----VVIE 250
L+ VC +L + + R + + +V + +PQLA ++ +K+ E IE
Sbjct: 261 SLRRVCWELYNPDIRLEGDEAKVTLMQCFQPQLAQFQMQSFERMIQKMRLAEDDPTFWIE 320
Query: 251 CKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNVL-- 293
K DG+R+Q+H G ++SR +++ YG+ A+++ +++
Sbjct: 321 EKLDGERMQLHMESDDSIPGGKRFVFWSRKAKEYTYLYGNGFFDENGALTRHLQKAFADG 380
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYFAFDVLYVGDTSVI 352
V ILDGEM+ WD + FG+ + A A R+ S+ ++ + FD+L++ +
Sbjct: 381 VQSIILDGEMITWDPEHDAIVPFGTLKSAALAEQRNPFSTGQRPLFRIFDILFLNGQPLT 440
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
+LK+R L+ V P R E + + H+ ++E ++
Sbjct: 441 RYTLKDRRRALEASVIPVHRRFEIHTYE-----------------IGHSAADIEHLLRKV 483
Query: 413 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVA 471
+ EG+VLK+ S + +R W+K+KPEY+ G LD ++IGGYYGSGRRGG ++
Sbjct: 484 VAEASEGLVLKNPNSPYRLNERHDDWMKVKPEYMTEFGESLDCIVIGGYYGSGRRGGALS 543
Query: 472 QFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
FL L +P + SFC+VG G + + + + ++ PKR P
Sbjct: 544 SFLCGLRVDESHAKKGDHPTKCYSFCKVGGGFTAADYANIRHHTDGKWIDWD-PKRPPTE 602
Query: 529 FYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
+ ++ ERPDVWI+ PE S++L + + T ++ F ++RFPR R+R DK
Sbjct: 603 YIELAGGDLQYERPDVWIK-PEDSVVLCVKASSVT-PTDQFRLGLTVRFPRFKRLRMDKD 660
Query: 587 WHDCLDVQSFVEL 599
WH L +Q F++L
Sbjct: 661 WHSALSIQEFMDL 673
>gi|261191087|ref|XP_002621952.1| DNA ligase [Ajellomyces dermatitidis SLH14081]
gi|239590996|gb|EEQ73577.1| DNA ligase [Ajellomyces dermatitidis SLH14081]
Length = 1037
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 185/613 (30%), Positives = 320/613 (52%), Gaps = 57/613 (9%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++R ++F+ + V D F A RLI+P DR+R YGLKE + L+ + +
Sbjct: 81 PQERRRDIIQRFISRWKKEVGDDIFPAFRLIIPEKDRDRAMYGLKEKAIGKLLVKVMKID 140
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ G A+ AG+F EV+ +R G +TI+E+N+ LD+L+
Sbjct: 141 KNSEDGFSLLNWKVPGQSFASRMAGDFAGRCFEVISKRPLRTEVGDMTIEEVNEQLDKLS 200
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
++ E++ +L+ + N +E+ W+I IIL+ +K+G +E+++F+ +HPDAE LF+++
Sbjct: 201 AASKEDEQVPILAYFYRMMNPEELMWLIRIILRQMKVGATERTLFNIWHPDAEALFSISS 260
Query: 198 DLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLA-MRIGDAHAAWRKLHGKE----VVIE 250
L+ VC +L + + R + + +V + +PQLA ++ +K+ E IE
Sbjct: 261 SLRRVCWELYNPDIRLEGDEAKVTLMQCFQPQLAQFQMQSFERMIQKMRLAEDDPTFWIE 320
Query: 251 CKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNVL-- 293
K DG+R+Q+H G ++SR +++ YG+ A+++ +++
Sbjct: 321 EKLDGERMQLHMESDDSIPGGKRFVFWSRKAKEYTYLYGNGFFDENGALTRHLQKAFADG 380
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYFAFDVLYVGDTSVI 352
V ILDGEM+ WD + FG+ + A A R+ S+ ++ + FD+L++ +
Sbjct: 381 VQSIILDGEMITWDPEHDAIVPFGTLKSAALAEQRNPFSTGQRPLFRIFDILFLNGQPLT 440
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
+LK+R L+ V P R E + + H+ ++E ++
Sbjct: 441 RYTLKDRRRALEASVIPVHRRFEIHTYE-----------------IGHSAADIEHLLRKV 483
Query: 413 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVA 471
+ EG+VLK+ S + +R W+K+KPEY+ G LD ++IGGYYGSGRRGG ++
Sbjct: 484 VAEASEGLVLKNPNSPYRLNERHDDWMKVKPEYMTEFGESLDCIVIGGYYGSGRRGGALS 543
Query: 472 QFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
FL L +P + SFC+VG G + + + + ++ PKR P
Sbjct: 544 SFLCGLRVDESHAKKGDHPTKCYSFCKVGGGFTAADYANIRHHTDGKWIDWD-PKRPPTE 602
Query: 529 FYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
+ ++ ERPDVWI+ PE S++L + + T ++ F ++RFPR R+R DK
Sbjct: 603 YIELAGGDLQYERPDVWIK-PEDSVVLCVKASSVT-PTDQFRLGLTVRFPRFKRLRMDKD 660
Query: 587 WHDCLDVQSFVEL 599
WH L +Q F++L
Sbjct: 661 WHSALSIQEFMDL 673
>gi|225684450|gb|EEH22734.1| DNA ligase [Paracoccidioides brasiliensis Pb03]
Length = 1004
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 201/672 (29%), Positives = 332/672 (49%), Gaps = 86/672 (12%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P +R ++F+ + V D F A RLI+P DR R YGLKE + L+ + +
Sbjct: 80 PQELRRDIIQRFISRWRKEVGNDVFPAFRLIIPEKDRYRAMYGLKEKAIGKLLVKVMKID 139
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NWR G A+ AG+F E++ +R G +TI+E+N+ LD+L+
Sbjct: 140 KNSEDGFSLLNWRLPGQTFASRMAGDFAGRCFEIISKRPMRTEVGDMTIEEVNEQLDKLS 199
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
++ E++ +L ++ N +E+ W+I IIL+ +K+G +E+++F+ +HPDAE LF+++
Sbjct: 200 AASKEDEQVPILEYFYRRMNPEELMWLIRIILRQMKVGATERTLFNLWHPDAEALFSISS 259
Query: 198 DLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLA-------------MRIG-DAHAAWRK 241
L+ VC +L + N R + + +V + +PQLA MR+ D W
Sbjct: 260 SLRRVCWELYNPNVRLEGDEAKVTLMQCFQPQLAQFQVQSFDRMIQRMRLAEDDPTFW-- 317
Query: 242 LHGKEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSK 286
IE K DG+R+Q+H G ++SR D++ YG+ A+++
Sbjct: 318 -------IEEKLDGERMQLHMQTDDSIPGGKRFVFWSRKAKDYTYLYGNGLLDENGALTR 370
Query: 287 IIEQNVLVD---RCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYFAFD 342
+ QN D ILDGEM+ WD + FG+ + A A R+ S+ ++ + FD
Sbjct: 371 HL-QNAFADGVQSIILDGEMITWDPEHDAIVPFGTLKTAALAEQRNPCSTGQRPLFRIFD 429
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
+LY+ ++ L++R L+ V P R E + + +
Sbjct: 430 ILYLNGRALTRYILRDRRRALEASVIPVHRRFEIHTYE-----------------IGRST 472
Query: 403 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYY 461
++E ++ + EG+VLK+ S + +R W+K+KP+Y+ G LD +++GGYY
Sbjct: 473 ADIEPLLRKVVAEASEGLVLKNPNSPYRLNERHDDWMKVKPDYMTEFGESLDCVVVGGYY 532
Query: 462 GSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 518
GSGRRGG ++ FL L P + SFC+VG G + + + +
Sbjct: 533 GSGRRGGALSSFLCGLRVDGAHAKKGDKPTKCYSFCKVGGGFTAADYANIRHHTDGKWMD 592
Query: 519 YEYPKRAPPSFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 576
++ PKR P + ++ + ERPDVWI+ PE S++L I + + S+ F +LRFP
Sbjct: 593 WD-PKRPPTEYIELGGDDAQHERPDVWIK-PEDSVVLCIKA-AQVTPSDQFRLGLTLRFP 649
Query: 577 RIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK------- 629
R R+R DK W L VQ F++ S+ K KE +P+ +S++K
Sbjct: 650 RFKRLRMDKNWQSALTVQEFMDF-KSNVEKEVKEKELRFDDTRRPRHKKSTKKPLTVAGY 708
Query: 630 -GEKKNVSIVPS 640
G KK PS
Sbjct: 709 EGGKKTAYASPS 720
>gi|226294103|gb|EEH49523.1| DNA ligase [Paracoccidioides brasiliensis Pb18]
Length = 977
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 201/672 (29%), Positives = 332/672 (49%), Gaps = 86/672 (12%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P +R ++F+ + V D F A RLI+P DR R YGLKE + L+ + +
Sbjct: 80 PQELRRDIIQRFISRWRKEVGNDVFPAFRLIIPEKDRYRAMYGLKEKAIGKLLVKVMKID 139
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NWR G A+ AG+F E++ +R G +TI+E+N+ LD+L+
Sbjct: 140 KNSEDGFSLLNWRLPGQTFASRMAGDFAGRCFEIISKRPMRTEVGDMTIEEVNEQLDKLS 199
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
++ E++ +L ++ N +E+ W+I IIL+ +K+G +E+++F+ +HPDAE LF+++
Sbjct: 200 AASKEDEQVPILEYFYRRMNPEELMWLIRIILRQMKVGATERTLFNLWHPDAEALFSISS 259
Query: 198 DLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLA-------------MRIG-DAHAAWRK 241
L+ VC +L + N R + + +V + +PQLA MR+ D W
Sbjct: 260 SLRRVCWELYNPNVRLEGDEAKVTLMQCFQPQLAQFQVQSFDRMIQRMRLAEDDPTFW-- 317
Query: 242 LHGKEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSK 286
IE K DG+R+Q+H G ++SR D++ YG+ A+++
Sbjct: 318 -------IEEKLDGERMQLHMQTDDSIPGGKRFVFWSRKAKDYTYLYGNGLLDENGALTR 370
Query: 287 IIEQNVLVD---RCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYFAFD 342
+ QN D ILDGEM+ WD + FG+ + A A R+ S+ ++ + FD
Sbjct: 371 HL-QNAFADGVQSIILDGEMITWDPEHDAIVPFGALKTAALAEQRNPCSTGQRPLFRIFD 429
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
+LY+ ++ L++R L+ V P R E + + +
Sbjct: 430 ILYLNGRALTRYILRDRRRALEASVIPVHRRFEIHTYE-----------------IGRST 472
Query: 403 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYY 461
++E ++ + EG+VLK+ S + +R W+K+KP+Y+ G LD +++GGYY
Sbjct: 473 ADIEPLLRKVVAEASEGLVLKNPNSPYRLNERHDDWMKVKPDYMTEFGESLDCVVVGGYY 532
Query: 462 GSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 518
GSGRRGG ++ FL L P + SFC+VG G + + + +
Sbjct: 533 GSGRRGGALSSFLCGLRVDGAHAKKGDKPTKCYSFCKVGGGFTAADYANIRHHTDGKWMD 592
Query: 519 YEYPKRAPPSFYQVTNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 576
++ PKR P + ++ + ERPDVWI+ PE S++L I + + S+ F +LRFP
Sbjct: 593 WD-PKRPPTEYIELGGDDAQHERPDVWIK-PEDSVVLCIKA-AQVTPSDQFRLGLTLRFP 649
Query: 577 RIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK------- 629
R R+R DK W L VQ F++ S+ K KE +P+ +S++K
Sbjct: 650 RFKRLRMDKNWQSALTVQEFMDF-KSNVEKEVKEKELRFDDTRRPRHKKSTKKPLTVAGY 708
Query: 630 -GEKKNVSIVPS 640
G KK PS
Sbjct: 709 EGGKKTAYASPS 720
>gi|115387487|ref|XP_001211249.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195333|gb|EAU37033.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 864
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 176/571 (30%), Positives = 294/571 (51%), Gaps = 56/571 (9%)
Query: 78 LGMSKDSADAVRLINWRKGGAAPN---AGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLL 133
+ + K+S D L+NW+ G A AG+F +V+ +R G ++I+E+N+ L
Sbjct: 1 MKIDKNSEDGFNLLNWKLPGQAAGSSMAGDFAGRCYDVISKRPMRTEVGNMSIEEVNEKL 60
Query: 134 DRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLF 193
DRL+++ E++ +L+ + N +E+ W+I IIL+ +K+G +E++ F +HPDAE+L+
Sbjct: 61 DRLSAASKEDEQLPILTDFYRHMNPEELMWLIRIILRQMKVGATERTFFDVWHPDAENLY 120
Query: 194 NVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLA---MRIGDAHAAWRKLHGKEVV 248
+++ L+ VC +L D N R + +D I + + +PQLA M D + K + V
Sbjct: 121 SISSSLRRVCWELHDPNIRLEAEDRGIALMQCYQPQLAQFQMHSLDRMISRMKPTEDDPV 180
Query: 249 --IECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YG-------HAMSKIIEQN 291
IE K DG+R+Q+H G ++SR D++ YG A+++ ++
Sbjct: 181 FWIEEKLDGERMQLHMQSDDSIPGGRRFRFWSRKAKDYTYLYGGGIYDENGALTRHLKDA 240
Query: 292 VL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYFAFDVLYVGD 348
V+ ILDGEM+ WD + A FG+ + A R+ S + FD+LY+
Sbjct: 241 FADGVESLILDGEMITWDPEQDAPAPFGTLKTAALSEQRNPFSGGSRPLLRVFDILYLNG 300
Query: 349 TSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKF 408
+ +L++R LQK +KP R E + P E A E+E
Sbjct: 301 RDLTRYTLRDRRNALQKSIKPVHRRFE-----------IHPYQE------ATGKAEIEAA 343
Query: 409 FKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRG 467
+ + EG+VLK+ S + +R W+K+KPEY+ G LDV++IGGY+GSG RG
Sbjct: 344 LRSVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDVVVIGGYFGSGHRG 403
Query: 468 GEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 524
G ++ FL L + + SFC+VG G + + + ++++ PK+
Sbjct: 404 GRLSSFLCGLRADGGHSSQGATSTKCYSFCKVGGGFNAADYANIRHHTDGKWKEWN-PKK 462
Query: 525 APPSFYQVT--NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVR 582
P + ++ + ERPD+WI+ PE S++L + + ++ S+ F +LRFPR R+R
Sbjct: 463 PPTEYIELAGGDAQHERPDMWIK-PEDSVVLCVKAASVSV-SDQFRIGLTLRFPRFKRLR 520
Query: 583 YDKPWHDCLDVQSFVELVHSSNGTTQKGKEY 613
DK W L VQ F++L S+ QK KE+
Sbjct: 521 MDKDWKSALSVQEFLDL-KSNVEQEQKEKEF 550
>gi|119478926|ref|XP_001259492.1| DNA ligase, putative [Neosartorya fischeri NRRL 181]
gi|119407646|gb|EAW17595.1| DNA ligase, putative [Neosartorya fischeri NRRL 181]
Length = 1023
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 208/683 (30%), Positives = 341/683 (49%), Gaps = 70/683 (10%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++R +F+ + V D + A RLILP DR+R YG+KE + L+ + +
Sbjct: 81 PLERRRDVIERFISRWRKEVGDDIYPAFRLILPDKDRDRAMYGIKEKAIGKMLVKIMKID 140
Query: 82 KDSADAVRLINWRKGGAAPN---AGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D + L+NW+ G A AG+F +V+ +R G + I+E+N+ LD+L+
Sbjct: 141 KNSEDGLNLLNWKLPGQAATSRMAGDFAGRCFDVISKRPMRTDVGDMLIEEVNEKLDKLS 200
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
++ +++ +L+ ++ N +E+ W+I IIL+ +K+G +E++ F +HPDAE+L++++
Sbjct: 201 AASKEEQQLPILAEFYRRMNPEELMWLIRIILRQMKVGATERTFFDVWHPDAENLYSISS 260
Query: 198 DLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLA---MRIGDAHAAWRKLHGKEVV--IE 250
L+ VC +L D N R +D I + + +PQLA M D A + ++ V IE
Sbjct: 261 SLRRVCWELHDPNIRLDAEDRGISLMQCFQPQLAQFQMDSLDRMVARMRPTEEDPVFWIE 320
Query: 251 CKFDGDRIQIHKN-------GSEIHYFSRSFLDHSE-YGHAMSKIIEQNVL--------- 293
K DG+R+Q+H + G ++SR +++ YG+ + E L
Sbjct: 321 EKLDGERMQLHMDSDDSVPGGRRFRFWSRKAKEYTYLYGNGIHD--ENGSLTRHLKDAFA 378
Query: 294 --VDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSD--RQLCYFAFDVLYVGD 348
V ILDGEM+ WD + A FG+ + A R+ S+ R L FD+LY+
Sbjct: 379 DGVQSLILDGEMITWDPEQDAPAPFGTLKTAALSEQRNPFSTTGARPLLR-VFDILYLNG 437
Query: 349 TSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKF 408
+ +L++R LQK V+P R E + P E A DEVE
Sbjct: 438 RDLTGYTLRDRRNALQKAVRPVHRRFE-----------IHPYEE------ATTKDEVEAA 480
Query: 409 FKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRG 467
++ + EG+VLK+ S + +R W+K+KPEY+ G LD+++IGGYYGSGRRG
Sbjct: 481 LRKVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVIGGYYGSGRRG 540
Query: 468 GEVAQFLVALA---ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 524
G ++ FL L + + SFC+VG G + + + + ++ PK+
Sbjct: 541 GNLSSFLCGLRVDDAHASQGASASKCYSFCKVGGGFNAADYANIRHHTDGKWMEWN-PKK 599
Query: 525 APPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVR 582
P ++ ++ ERPD+WI+ PE S+++ + + S+ F +LRFPR R+R
Sbjct: 600 PPTAYIELAGRDAQYERPDMWIK-PEDSVVICVKA-ASVSASDQFRIGLTLRFPRFKRLR 657
Query: 583 YDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHF 642
DK W L VQ F++L S+ + KE L D ++ R R +K V +
Sbjct: 658 MDKDWRSALSVQEFLDL-KSNAEQEHREKE---LNVDNSRRKRVKRTAKKP--LTVAGYD 711
Query: 643 LQTDVSDIKGETSIFSDMVFCIL 665
+ DV IF + F IL
Sbjct: 712 MDEDVKYAGPSGHIFDGLNFYIL 734
>gi|295670397|ref|XP_002795746.1| DNA ligase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284831|gb|EEH40397.1| DNA ligase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 977
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 191/644 (29%), Positives = 328/644 (50%), Gaps = 60/644 (9%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P +R ++F+ + V D F A RLI+P DR+R YGLKE + L+ + +
Sbjct: 80 PQELRRDIIQRFISRWRKEVGNDVFPAFRLIIPGKDRDRAMYGLKEKAIGKLLVKVMKID 139
Query: 82 KDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ G A+ AG+F E++ +R G +TI+E+N+ LD+L+
Sbjct: 140 KNSEDGFSLLNWKVPGQTFASRMAGDFAGRCFEIISKRPMRTEVGDMTIEEVNEQLDKLS 199
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
++ E++ +L ++ N +E+ W+I IIL+ +K+G +E+++F+ +HPDAE LF+++
Sbjct: 200 AASKEDEQVPILEYFYRRMNPEELMWLIRIILRQMKVGATERTLFNLWHPDAEALFSISS 259
Query: 198 DLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLA-MRIGDAHAAWRKLHGKE----VVIE 250
L+ VC +L + N R + + +V + +PQLA ++ +++ E IE
Sbjct: 260 SLRRVCWELYNPNVRLEGDEAKVTLMQCFQPQLAQFQVQSFDRMIQRMSLAEDDPTFWIE 319
Query: 251 CKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNVLVD 295
K DG+R+Q+H G ++SR +++ YG+ A+++ + QN D
Sbjct: 320 EKLDGERMQLHMQTDDSIPGGKRFAFWSRKAKEYTYLYGNGLFDENGALTRHL-QNAFAD 378
Query: 296 ---RCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILDGEM+ WD + FG+ + A A R+ S+ ++ + FD+LY+ ++
Sbjct: 379 GVQSIILDGEMITWDPEHDAIVPFGTLKTAALAEQRNPFSTGQRPLFRIFDILYLNGRAL 438
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
L++R L+ V P R E + + + ++E ++
Sbjct: 439 TRYILRDRRRALEASVIPVHRRFEIHTYE-----------------IGRSTADIEPLLRK 481
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEV 470
+ EG+VLK+ S + +R W+K+KP+Y+ G LD ++IGGYYGSGRRGG +
Sbjct: 482 VVAEASEGLVLKNPNSPYRLNERHDDWMKVKPDYMTEFGESLDCVVIGGYYGSGRRGGAL 541
Query: 471 AQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
+ FL L P + SFC+VG G + + + + ++ PK P
Sbjct: 542 SSFLCGLRVDGAHAKKGDKPTKCYSFCKVGGGFTAADYANIRHHTDGKWMDWD-PKTPPT 600
Query: 528 SFYQV--TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
+ ++ + ERPDVWI+ PE S++L I + + S+ F +LRFPR R+R DK
Sbjct: 601 EYIELGGGDAQHERPDVWIK-PEDSVVLCIKA-AQVTPSDQFRLGLTLRFPRFKRLRMDK 658
Query: 586 PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 629
W L VQ F++ S+ K KE +P+ +S++K
Sbjct: 659 DWQSALTVQEFMDF-KSNVEKEVKEKELRFDDTSRPRHKKSTKK 701
>gi|307185188|gb|EFN71325.1| DNA ligase 4 [Camponotus floridanus]
Length = 891
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 196/656 (29%), Positives = 302/656 (46%), Gaps = 64/656 (9%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDS-------------VDYFSALRLILPSLDR 58
L + + K + KK + F+D +C + V + LRLIL L+R
Sbjct: 13 LCDILENVTKAQGVKKKAQILQTFID-FCRNIGNKLKTEYPELDVSLYPILRLILVDLER 71
Query: 59 ERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAG-NFPMVAAEVLQRRQ 117
ERG + LK++ LA + G K+S + +L N+R+ + G +F A +L +R
Sbjct: 72 ERGPHNLKQASLAKLYANVYGFMKNSDNYKKLANYREPASGKFIGSDFAERAYCILDKRL 131
Query: 118 GMISGGLTIKELNDLLDRLASSE-NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGI 176
S G TI +N LD ++ EKI L ++ EMKWI I+LKDL+LGI
Sbjct: 132 PKTSTGFTIARINIFLDDISKKNVTMQEKIETFRVLFRQITGFEMKWITRIVLKDLRLGI 191
Query: 177 SEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMR--IGD 234
K I +H DA + F VT DL+ +C +L D + K I++ +P L R I +
Sbjct: 192 GTKRILEIYHQDANEKFLVTNDLREICNQLHDPKTKIK-CGIQIFSHFKPMLLERCDIKN 250
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLD---HSEYGHAMSKIIEQN 291
+R ++ K+DG+R Q+H + YF+R D +S YG S
Sbjct: 251 IEKLFR--DNDLYYVQTKYDGERSQLHMKDGKFKYFTRRGYDITKNSGYGETGSSGFLTG 308
Query: 292 VLVDRC-------ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVL 344
V R ILDGE++ W F G N ++ + + S Q C+ AFD++
Sbjct: 309 VFTRRLNPNCHSFILDGELMGWHKEKGIFGTKGMNFDVKNLSAN---SHHQPCFVAFDII 365
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
+ ++ + K R +LL + +G L C S + N +E
Sbjct: 366 LHNNILLVDEPYKNRVKLLNDIFTEEEGSLIV-----------------CRSSLISNREE 408
Query: 405 VEKFFKETIENRDEGIVLKDLGSKWEPGDR-SGKWLKLKPEYI-RAGSDLDVLIIGGYYG 462
+ + F E + + +EG+V+K K++P R G K+K EY D+D++I+GGYYG
Sbjct: 409 LIEAFNERLRDNEEGLVIKKHDMKYKPNVRDGGGCYKIKAEYSDNLVQDIDLIILGGYYG 468
Query: 463 SGRRGGEVAQFLVALAERPA-PDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 521
G+ G + F+V +A + + P R ++ V +G+ D+ L + TK ++ K E
Sbjct: 469 EGKYTGIIKSFMVGVAASTSNKEGNPSRLLAVVSVSSGIGDQMLRDLQTKFASHWIK-ER 527
Query: 522 PKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 581
P+ VT KE+PDVWI PE SIIL I + IRS + YSLRFPR+ +
Sbjct: 528 PE-------NVTGPKKEQPDVWIR-PENSIILKIRA-TEMIRSNEYPIGYSLRFPRVVDI 578
Query: 582 RYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 637
R DKPW+ + LV + + K L D +K +N SI
Sbjct: 579 RMDKPWYSPCTSSELLLLVKNKGMIQKLTKREATLHDVDEAPVAKLQKTVSRNKSI 634
>gi|345496864|ref|XP_003427838.1| PREDICTED: general transcription factor 3C polypeptide 3-like
isoform 2 [Nasonia vitripennis]
Length = 918
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 201/627 (32%), Positives = 315/627 (50%), Gaps = 72/627 (11%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFL-----------DTYCDS-VDYFSALRLILPSLDRE 59
L SLF + K K A+K + +KF D D+ V F RL+LP+L+R+
Sbjct: 14 LCSLFEKVSKAK-GAQKVQELQKFTRECRVLASKIKDQNSDADVSLFPVFRLLLPALERD 72
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGM 119
RG YGL+ L + K+SA A +L N+RK GA + N + + + +
Sbjct: 73 RGPYGLQNKTLVAIYQRVFYLGKNSARADKLTNFRKPGACGSGKNDDLAESVYWLMKNHL 132
Query: 120 ISGG-LTIKELNDLLDRLAS--SENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGI 176
GG L+I+ +N+ LD +A+ ENR+ K L K NA E+KW+ ++LK+LKLG+
Sbjct: 133 PEGGTLSIQHVNEFLDNIAACNEENRS-KDEHFRHLTSKVNAMELKWLTRLLLKELKLGL 191
Query: 177 SEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDR-NQRHKRQD-----IEVGKAVRPQLAM 230
++K +F HP+AE FNV+ L+ VCEK + NQ + IE+ V+P L
Sbjct: 192 AQKKVFEVIHPEAEAQFNVSSSLRRVCEKYSETVNQLSHTVNSNGISIELFSHVKPMLLE 251
Query: 231 RIGDAHAAWRKLHGKEV-VIECKFDGDRIQIHKNGSEIHYFSRSFLD---HSEYGHAMSK 286
R AA +G+++ ++ KFDG+R QIH YF+R D ++ YG
Sbjct: 252 RFKIEEAAKLFPNGRQLYYLQTKFDGERSQIHFKAGCFKYFTRKGYDITQNASYGETPES 311
Query: 287 --IIEQNV---LVDRC---ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCY 338
+ N+ L + C ILDGEM+ W N ++ K + + S Q C+
Sbjct: 312 GGFLSSNIAPQLHESCRSVILDGEMMGWHKERKTLGTKALNYDVKKLSEN---SKHQPCF 368
Query: 339 FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLV 398
A+D+L D ++ + ER L+ +G + C +
Sbjct: 369 VAYDILMYNDEPLLDKPYIERLAYLRGAFSEKEGVIML-----------------CDTQT 411
Query: 399 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPG--DRSGKWLKLKPEYIRA-GSDLDVL 455
+D++ + F ++N +EGIV+K + + P +RSG + K+K EY A +DLD+L
Sbjct: 412 VSELDKLVEIFNLALDNEEEGIVVKRSDALYRPNVRERSGCY-KIKAEYSDALVNDLDLL 470
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDT--YPRRFISFCRVGTGLSDEELDAVVTKLK 513
I+GGYYG GR G V+ FLV +A +PA + P F + V +GLSD++L + KLK
Sbjct: 471 ILGGYYGQGRCSGTVSSFLVGVA-KPATNKNGMPSEFHAVVSVRSGLSDDQLRIIQNKLK 529
Query: 514 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSL 573
P+++ + P + E PDVW+ SP+ S++L + + +RS+ + YSL
Sbjct: 530 PHWK-----DKKPVGVF---GPRSEPPDVWV-SPKHSMVLQLRAS-EMVRSKSYPIGYSL 579
Query: 574 RFPRIDRVRYDKPWHDCLDVQSFVELV 600
RFPR+ ++R DKPW++ F LV
Sbjct: 580 RFPRVMKIRTDKPWYNACSTTEFESLV 606
>gi|255954011|ref|XP_002567758.1| Pc21g07170 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589469|emb|CAP95614.1| Pc21g07170 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 990
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 203/676 (30%), Positives = 351/676 (51%), Gaps = 61/676 (9%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++R +F+ + V D + ALRLILP DR+R YG+KE + L+ + ++
Sbjct: 78 PFERRRDVIERFISRWRKDVGDDIYPALRLILPDKDRDRPMYGIKEKAIGRMLVKIMKIN 137
Query: 82 KDSADAVRLINWR---KGGAAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ +G AG+F +VL +R G +TI+E+N+ LD+L+
Sbjct: 138 KESEDGYNLLNWKLPGQGATTRMAGDFARRCFDVLSKRPMRTDPGDMTIEEVNEKLDKLS 197
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
++ E++ +L+ ++ N +E+ W+I IIL+ +K+G +E++ F +HPDAE+L++++
Sbjct: 198 AASKEDEQLPILTEFYRRMNPEELLWLIRIILRQMKVGATERTFFDVWHPDAENLYSISS 257
Query: 198 DLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLA---MRIGDAHAAWRKLHGKEVV--IE 250
L+ VC +L D N R + ++ I + + +PQLA M + A K + V IE
Sbjct: 258 SLRRVCWELHDPNIRLEGEERGIALMQCFQPQLAQFQMHSFERIIARMKPTEDDNVFWIE 317
Query: 251 CKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNVL-- 293
K DG+R+Q+H K G + ++SR +++ YG+ A+++ ++ +
Sbjct: 318 EKMDGERMQLHMAPDDSTKGGRKFGFWSRKAKEYTYLYGNGIYDENGALTRHLKDAFVDG 377
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYFAFDVLYVGDTSVI 352
V ILDGEM+ WD + FG+ + A A R+ S+ + + FD+L++ +
Sbjct: 378 VQSIILDGEMITWDPEQDAMVPFGTLKTAALAEQRNPFSNGPRPLFRVFDILHLNGRDLT 437
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
+L++R L+K V+P R E ++S+ A EVE ++
Sbjct: 438 KYTLRDRRNALEKTVRPVHRRFE-------IHSYE----------EATTTTEVEAALRKV 480
Query: 413 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVA 471
+ EG+VLK+ S + +R W+K+KP+Y+ G LDV++IGGYYGSGRRGG ++
Sbjct: 481 VAEASEGLVLKNPRSPYRLNERHDDWMKVKPDYMTEFGESLDVIVIGGYYGSGRRGGALS 540
Query: 472 QFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQ 531
FL L + + + SFC+VG G + + V ++ ++ K+ P +F +
Sbjct: 541 SFLCGLRVDDSTQAAEKCW-SFCKVGGGFTAADYQEVRHHTDGKWKAWD-AKKPPTTFVE 598
Query: 532 VT--NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHD 589
+ + ERPD+WI+ P SI+L + + I S+ F +LRFPR ++R DK W
Sbjct: 599 LAGGDAQHERPDMWIK-PSDSIVLCVKAASVAI-SDQFRMGLALRFPRFKKLRKDKDWKT 656
Query: 590 CLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSD 649
L VQ F++L S+ + KE+ K + R+++K V H DV
Sbjct: 657 ALSVQEFLDL-KSNAEQEHREKEFSVDNSRKKRVKRATKKP-----LTVAGHEDNVDVQY 710
Query: 650 IKGETSIFSDMVFCIL 665
+ +F ++ F I+
Sbjct: 711 LGPSGHVFDELNFFIM 726
>gi|380492300|emb|CCF34704.1| DNA ligase I [Colletotrichum higginsianum]
Length = 998
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 215/688 (31%), Positives = 347/688 (50%), Gaps = 75/688 (10%)
Query: 21 KTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDAL 78
K P ++R +F+ + + V D + ALRLILP DR+RG YGLKE+ + L+ +
Sbjct: 84 KLSPQEQRRHIIERFISRWRNDVGNDIYPALRLILPDKDRDRGVYGLKENAIGKLLVKLM 143
Query: 79 GMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLD 134
+ K+S D L++W+ G A+ AG+F EVL +R I G +TI E+N+LLD
Sbjct: 144 KIDKNSEDGHNLLHWKLPGHTTASRMAGDFAGRCFEVLTKRPMRIEVGDMTIAEVNELLD 203
Query: 135 RLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFN 194
RLA+S E + V ++ NA+EM W+I I+LK +K+G +E++ +HPD E LF+
Sbjct: 204 RLAASTGELENLEVFEIFYERMNAEEMMWLIRIVLKQMKVGATERTFLDLWHPDGEALFS 263
Query: 195 VTCDLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLAMRIGDAHAAWRKL--------HG 244
V+ L+ VC +L D R +++D V + +PQLA ++++K+
Sbjct: 264 VSSSLRRVCWELYDPQVRLEQEDTGVCLMECFQPQLAQ--FQMPSSFQKMVDYLRPTEED 321
Query: 245 KEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVL--- 293
E IE K DG+R+Q+H G ++SR D++ YG+ + E+ L
Sbjct: 322 PEFWIEEKLDGERMQLHVTEDSSVPGGRRFGFWSRKAKDYTYLYGNGLRD--EKGALTRH 379
Query: 294 --------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGL--SSDRQLCYFAFDV 343
V ILDGEM+ WD +++ FG+ + A A ++ +S + Y FD+
Sbjct: 380 LGDAFATGVRNLILDGEMITWDPEVDKIMPFGTLKTAALAEQNNPYNNSGPRPLYRVFDI 439
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
L + D + +L++R + L K VK RLE + D+ VA + D
Sbjct: 440 LLLNDKPLTQYTLRDRRQALSKAVKGVHRRLE--IHDYE---------------VATSPD 482
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYG 462
+E ++ + EG+VLK+ S + R+ WLK+KPEY+ G LD +++GGYYG
Sbjct: 483 AIEPLLRKVVAEASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCVVVGGYYG 542
Query: 463 SGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
SGRRGG ++ F+ L P + SF +VG G E+ + + + ++
Sbjct: 543 SGRRGGALSSFMCGLRVSENHIQAGANPEKCFSFFKVGGGFRAEDYAEIRHRTDGKWMQW 602
Query: 520 EYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 577
+ P++ P F ++ + ERPDVWI P S++L + S+ FS ++LRFPR
Sbjct: 603 D-PRKPPVEFVELAGGDRQFERPDVWIR-PRDSVVLEAKA-ASIGSSDQFSLGFTLRFPR 659
Query: 578 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 637
R+R DK W + L VQ F++L ++ KE +++ R S K K+ V I
Sbjct: 660 FRRLRSDKNWDEGLSVQEFLDL---RKRVEEEAKEKTMSVENRK---RKSVKRAKREVVI 713
Query: 638 VPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ + K + +F + FC+L
Sbjct: 714 AGTENMPAQFEGQK--SKLFDGLEFCVL 739
>gi|159126827|gb|EDP51943.1| DNA ligase, putative [Aspergillus fumigatus A1163]
Length = 979
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 205/684 (29%), Positives = 342/684 (50%), Gaps = 72/684 (10%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++R +F+ + V D + A RLILP DR+R YG+KE + L+ + +
Sbjct: 81 PLERRRDVIERFISRWRKEVGDDIYPAFRLILPDKDRDRAMYGIKEKAIGKMLVKIMKID 140
Query: 82 KDSADAVRLINWRKGGAAPNA---GNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ G A + G+F +V+ +R G + I+E+N+ LD+L+
Sbjct: 141 KNSEDGFNLLNWKLPGQAATSRMTGDFAGRCFDVISKRPMRTDVGDMLIEEVNEKLDKLS 200
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
++ +++ +L+ ++ N +E+ W+I IIL+ +K+G +E++ F +HPDAE+L++++
Sbjct: 201 AASKEEQQLPILAEFYRRMNPEELMWLIRIILRQMKVGATERTFFDVWHPDAENLYSISS 260
Query: 198 DLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLA---MRIGDAHAAWRKLHGKEVV--IE 250
L+ VC +L D N R +D I + + +PQLA M D A + ++ V IE
Sbjct: 261 SLRRVCWELHDPNIRLDAEDRGISLMQCFQPQLAQFQMDSLDRMVARMRPTEEDPVFWIE 320
Query: 251 CKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVLVDR------ 296
K DG+R+Q+H G ++SR +++ YG+ I ++N + R
Sbjct: 321 EKLDGERMQLHMASDDSVPGGRRFRFWSRKAKEYTYLYGNG---IYDENGSLTRYLKDAF 377
Query: 297 ------CILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSD--RQLCYFAFDVLYVG 347
ILDGEM+ WD + A FG+ + A R+ S+ R L FD+LY+
Sbjct: 378 ADGVQSLILDGEMITWDPEQDAPAPFGTLKTAALSEQRNPFSTTGARPLLR-VFDILYLN 436
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ +L++R + LQK V+P R E + P E A D+VE
Sbjct: 437 GRDLTGYTLRDRRKALQKAVRPVHRRFE-----------IHPYEE------ATTKDQVEA 479
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRR 466
++ + EG+VLK+ S + +R W+K+KPEY+ G LD+++IGGYYGSGRR
Sbjct: 480 ALRKVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVIGGYYGSGRR 539
Query: 467 GGEVAQFLVALA---ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
GG ++ FL L + + SFC+VG G + + + + ++ PK
Sbjct: 540 GGNLSSFLCGLRVDDGHASQGASASKCYSFCKVGGGFNAADYANIRHHTDGKWMEWN-PK 598
Query: 524 RAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 581
+ P ++ ++ ERPD+WI+ PE S+++ + + S+ F +LRFPR R+
Sbjct: 599 KPPTAYIELAGRDAQYERPDMWIK-PEDSVVICVKA-ASVSASDQFRLGLTLRFPRFKRL 656
Query: 582 RYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSH 641
R DK W L VQ F++L + Q+ +E L D ++ R R +K V +
Sbjct: 657 RMDKDWKSALSVQEFLDL---KSNVEQEHRE-KELNVDNSRRKRVKRTAKKP--LTVAGY 710
Query: 642 FLQTDVSDIKGETSIFSDMVFCIL 665
+ DV IF + F IL
Sbjct: 711 DMDEDVKYAGPSGHIFDGLNFYIL 734
>gi|70997395|ref|XP_753446.1| DNA ligase [Aspergillus fumigatus Af293]
gi|74673507|sp|Q4WVG8.1|DNLI4_ASPFU RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|66851082|gb|EAL91408.1| DNA ligase, putative [Aspergillus fumigatus Af293]
Length = 979
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 205/684 (29%), Positives = 342/684 (50%), Gaps = 72/684 (10%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++R +F+ + V D + A RLILP DR+R YG+KE + L+ + +
Sbjct: 81 PLERRRDVIERFISRWRKEVGDDIYPAFRLILPDKDRDRAMYGIKEKAIGKMLVKIMKID 140
Query: 82 KDSADAVRLINWRKGGAAPNA---GNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLA 137
K+S D L+NW+ G A + G+F +V+ +R G + I+E+N+ LD+L+
Sbjct: 141 KNSEDGFNLLNWKLPGQAATSRMTGDFAGRCFDVISKRPMRTDVGDMLIEEVNEKLDKLS 200
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
++ +++ +L+ ++ N +E+ W+I IIL+ +K+G +E++ F +HPDAE+L++++
Sbjct: 201 AASKEEQQLPILAEFYRRMNPEELMWLIRIILRQMKVGATERTFFDVWHPDAENLYSISS 260
Query: 198 DLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLA---MRIGDAHAAWRKLHGKEVV--IE 250
L+ VC +L D N R +D I + + +PQLA M D A + ++ V IE
Sbjct: 261 SLRRVCWELHDPNIRLDAEDRGISLMQCFQPQLAQFQMDSLDRMVARMRPTEEDPVFWIE 320
Query: 251 CKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVLVDR------ 296
K DG+R+Q+H G ++SR +++ YG+ I ++N + R
Sbjct: 321 EKLDGERMQLHMASDDSVPGGRRFRFWSRKAKEYTYLYGNG---IYDENGSLTRYLKDAF 377
Query: 297 ------CILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSD--RQLCYFAFDVLYVG 347
ILDGEM+ WD + A FG+ + A R+ S+ R L FD+LY+
Sbjct: 378 ADGVQSLILDGEMITWDPEQDAPAPFGTLKTAALSEQRNPFSTTGARPLLR-VFDILYLN 436
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+ +L++R + LQK V+P R E + P E A D+VE
Sbjct: 437 GRDLTGYTLRDRRKALQKAVRPVHRRFE-----------IHPYEE------ATTKDQVEA 479
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRR 466
++ + EG+VLK+ S + +R W+K+KPEY+ G LD+++IGGYYGSGRR
Sbjct: 480 ALRKVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVIGGYYGSGRR 539
Query: 467 GGEVAQFLVALA---ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
GG ++ FL L + + SFC+VG G + + + + ++ PK
Sbjct: 540 GGNLSSFLCGLRVDDGHASQGASASKCYSFCKVGGGFNAADYANIRHHTDGKWMEWN-PK 598
Query: 524 RAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 581
+ P ++ ++ ERPD+WI+ PE S+++ + + S+ F +LRFPR R+
Sbjct: 599 KPPTAYIELAGRDAQYERPDMWIK-PEDSVVICVKA-ASVSASDQFRLGLTLRFPRFKRL 656
Query: 582 RYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSH 641
R DK W L VQ F++L + Q+ +E L D ++ R R +K V +
Sbjct: 657 RMDKDWKSALSVQEFLDL---KSNVEQEHRE-KELNVDNSRRKRVKRTAKKP--LTVAGY 710
Query: 642 FLQTDVSDIKGETSIFSDMVFCIL 665
+ DV IF + F IL
Sbjct: 711 DMDEDVKYAGPSGHIFDGLNFYIL 734
>gi|340520170|gb|EGR50407.1| DNA ligase [Trichoderma reesei QM6a]
Length = 960
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 200/628 (31%), Positives = 316/628 (50%), Gaps = 72/628 (11%)
Query: 19 IQKTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLID 76
+ K P ++R +F+ + V D++ ALRLILP DR+RG YGLKE+ + L+
Sbjct: 48 LTKLSPQEQRRHIIERFITRWRKEVGNDFYPALRLILPDKDRDRGVYGLKENAIGKLLVK 107
Query: 77 ALGMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDL 132
+ + K+S D L++W+ G A AG+F EV+ +R G +TI E+N
Sbjct: 108 LMKIDKNSEDGYNLLHWKLPGQTTGARLAGDFAGRCFEVISKRPMRTQVGDMTIAEVNHQ 167
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDL 192
LD+LA+S AE + + T + NA+E+ W+I IILK +K+G +EK+ + +HPDAE L
Sbjct: 168 LDKLAASSGEAENLRIFETFYNRMNAEELMWLIRIILKQMKVGATEKTFLYLWHPDAEAL 227
Query: 193 FNVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAWRKL-------- 242
F+V+ L+ VC +L D R ++ + I V + +PQLA A+++K+
Sbjct: 228 FSVSSSLRRVCWELYDPEFRLEQDEAGIAVMQCFQPQLAQ--FQMPASFQKMIELLRPTE 285
Query: 243 HGKEVVIECKFDGDRIQI-------HKNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVLV 294
E IE K DG+R+Q+ H G ++SR D++ YG + +++N +
Sbjct: 286 DDAEFWIEEKLDGERMQMHMMEDPNHPGGRRFRWWSRKAKDYTYLYGDGL---LDENSSL 342
Query: 295 DR------------CILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS----SDRQLCY 338
R ILDGEM+ WD +++ FG+ + A A + S + + +
Sbjct: 343 TRHLKNAFAPGVRNLILDGEMITWDMGVDKIVPFGTLKSAAIAEQSNKSESNAAGHRPLF 402
Query: 339 FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLV 398
FD+LY+ D + +L++R LQK ++P RLE H
Sbjct: 403 RVFDILYLNDKQLTQYTLRDRRNALQKAIRPVHRRLEI----HEYTP------------- 445
Query: 399 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 457
A + D +E +E + N EG+VLK+ S + R+ WLK+KPEY+ G LD +II
Sbjct: 446 ATSADAIEPLLREVVANASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCVII 505
Query: 458 GGYYGSGRRGGEVAQFLVALAERP---APDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 514
GGYYGSGRRGG ++ FL L P P + SF +VG G E+ + +
Sbjct: 506 GGYYGSGRRGGMLSSFLCGLRVSPNHIQAGANPEKCFSFFKVGGGFRTEDYAEIRHRTDG 565
Query: 515 YFRKYEYPKRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 571
+ +++ PK P + ++ ERPD+WI K ++ S+ F+ +
Sbjct: 566 KWMEWD-PKNPPSEYIELGGGEAKQYERPDMWIRP--KDSVVVSVKAASVGPSDQFARGF 622
Query: 572 SLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+LRFPR R+R D+ W L ++ F EL
Sbjct: 623 TLRFPRFRRLRLDRSWDTALSLEEFQEL 650
>gi|195130577|ref|XP_002009728.1| GI15517 [Drosophila mojavensis]
gi|193908178|gb|EDW07045.1| GI15517 [Drosophila mojavensis]
Length = 926
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 194/710 (27%), Positives = 319/710 (44%), Gaps = 98/710 (13%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVD-------------------YFSALRLI 52
+ ++ +++ K +K +++ D++C D ++ LRL+
Sbjct: 19 ICTMMQRVKEAKNTQRKEIILKRYYDSFCKHRDAFRQGASLTENQTEDGATSFYPVLRLL 78
Query: 53 LPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEV 112
LP D R +YGL+ + L L ++KDS+D +RL + A + ++ V V
Sbjct: 79 LPGADTARDNYGLQITALGRLYSRILQVAKDSSDYIRL----QHRTASSFRDYADVVYAV 134
Query: 113 LQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDL 172
L+ R LT+K+++D+LD +AS E+ K L+ + +A+E KW+I I+LK +
Sbjct: 135 LRPRCHNEPSNLTLKQIHDMLDIIAS-EDTTVKERELTRFTELASAEEQKWLIRILLKSM 193
Query: 173 KLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKA--------- 223
LGI E+ IF HP A+D++ DLK +C L D + G A
Sbjct: 194 GLGIGEQRIFGLLHPLAKDMYQRCSDLKRICMLLADNKMAQEASSARAGNASGATSSTTI 253
Query: 224 -----------VRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSR 272
+RP L R + + + +E K DG+R Q+H Y SR
Sbjct: 254 NLNTIIEPFQLIRPMLCERFPGKIESL--MESDVLYLERKMDGERFQLHYARGMFKYISR 311
Query: 273 SFLDHSEYGHAMSKIIEQNVL-----------VDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+ D Y + E L ++ ILDGEM++WDT R+ E G N +
Sbjct: 312 NGAD---YTRSFGGSYESGTLTPHLRTLLPLGMESIILDGEMMIWDTQQMRYREKGENTD 368
Query: 322 IAKAARDGLSSDR--QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVP 379
+ L DR + C+ +D+LY+ S++ + +R LQ+++ G LE +
Sbjct: 369 VKH-----LKPDRGWRPCFVVYDLLYLNGESLLDMTYVQRAYKLQELLTEQPGILEIM-- 421
Query: 380 DHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDR-SGKW 438
+G+ SL D F++ +++ EGIVLK S + PG R G W
Sbjct: 422 ----------RGQKITSL-----DHFNTLFQQMLDSNAEGIVLKKQNSIYRPGVRVGGGW 466
Query: 439 LKLKPEYIRAG-SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVG 497
K K +YI ++ DVLIIGG+Y R+ + FL+ + +P T S V
Sbjct: 467 YKDKADYIEGLITEFDVLIIGGFY--NRKRTFIESFLLGVL-KPGGGTERDEVYSIGCVA 523
Query: 498 TGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKE-RPDVWIESPEKSIILSI- 555
+ + + +LKP++R PP +Y N KE PDVWI+ PEKSIIL +
Sbjct: 524 N--NTRQRGVLHNELKPHWRNAS--TDPPPLWYHYRPNEKEGAPDVWIQ-PEKSIILQVK 578
Query: 556 TSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGG 615
+D+ + + P SL FPR +R DK WH+C+ ++ + +L + K
Sbjct: 579 AADLSP--NGAYYTPKSLHFPRTQMMRIDKVWHECMTLEEYTQLCQGRGAIKKLNKRPAN 636
Query: 616 LQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
L D ++ R ++N + ++ + D +K + +F FCIL
Sbjct: 637 LSDFTTERKRQKMTPAERNRLGLAAYEKRYDAEPLKSSSQLFEGFTFCIL 686
>gi|198467247|ref|XP_001354322.2| GA11455 [Drosophila pseudoobscura pseudoobscura]
gi|198149409|gb|EAL31375.2| GA11455 [Drosophila pseudoobscura pseudoobscura]
Length = 916
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 200/706 (28%), Positives = 330/706 (46%), Gaps = 92/706 (13%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYC-------------------DSVDYFSALRLI 52
+ LF ++ K K R + +++C S + S LRL+
Sbjct: 12 VCELFEKVKAAKKVQDKEDVLRSYYESFCRHREAFRQAAGLTDEQSENGSSSFHSVLRLL 71
Query: 53 LPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEV 112
LPS D R +YGL+ + L L +++DS DA+ ++ R G + + G+ V V
Sbjct: 72 LPSADTRRDNYGLQITALGRLYTRVLQLTRDSRDAI-MLQHRTGSSFRDYGD---VVYAV 127
Query: 113 LQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDL 172
L R L + ++++LD +A+ E+ + K L ++ +A+E KW+I I+LK L
Sbjct: 128 LVSRCFNPPSDLRLNAIHEMLDTIAN-EDTSVKEQELIRFTEQASAREQKWLIRILLKSL 186
Query: 173 KLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVG----------- 221
LGI E+ IF HP+A+D++ DL VC + D+ K D ++
Sbjct: 187 GLGIGEQRIFGVLHPNAKDIYQRCSDLSHVCNLVADKVSDLKVSDTKITGNSHPSTVNLN 246
Query: 222 ------KAVRPQLAMRI-GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF 274
+RP L R GD + + +E K DG+R Q+H + Y SR+
Sbjct: 247 AVIRPFHQIRPMLCERFPGDIQEL---MQSDVLYLETKMDGERFQLHIDRGRFMYLSRNG 303
Query: 275 LDHS-EYGHAMSKIIEQNVL-------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAA 326
+D+S +G + S+ L + ILDGEM+VWDT+ R+ E G N ++
Sbjct: 304 VDYSNNFGESYSRGTLTPQLRGLLPLGLQTIILDGEMMVWDTNQKRYREKGENTDVK--- 360
Query: 327 RDGLSSDRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLN 384
L DR C+ +D+LY S++ + +R LQK++ +G L+ +
Sbjct: 361 --NLKPDRSWRPCFVVYDLLYFNGQSLLDLTYIQRSYKLQKLIGEQQGVLQLM------- 411
Query: 385 SHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDR-SGKWLKLKP 443
+G S ++E K F++ +++ EGIVLK S ++PG R G W K K
Sbjct: 412 -----RGTKIGS-----IEEFNKLFQQALDSNAEGIVLKKQSSIYQPGVRVGGGWYKDKA 461
Query: 444 EYIRAG-SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSD 502
+YI+ ++ DVLIIGG+Y R+ + FL+ + + P ++ R + +G +++
Sbjct: 462 DYIKGLITEFDVLIIGGFY--NRKRTFIDSFLLGVLQ-PMANSDSRHEVY--SIGC-VTN 515
Query: 503 EELDAVVTK--LKPYFRKYEYPKRAPPSFYQVTNNSK-ERPDVWIESPEKSIILSITSDI 559
AVV L+P++ ++ K PP +Y N K PD+WI+ P SIIL + +
Sbjct: 516 NTRQAVVLNHTLRPHW--HDTTKEPPPLWYHYMANEKIGSPDLWID-PHNSIILQVKAAD 572
Query: 560 RTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
T S F P +L FPRI+ R DK W++C+ +Q F +L S + K + L D
Sbjct: 573 LTPNS-AFYTPKALHFPRIELKRDDKAWNECMTLQEFNQLCEGSGPIKKLNKRHLCLDDL 631
Query: 620 KPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
K+ R ++ + + + DV T +F + FCIL
Sbjct: 632 TTKRKRLRMTPAERRRLGLAIYEKRYDVGTSSSCTKLFEGLSFCIL 677
>gi|367050110|ref|XP_003655434.1| hypothetical protein THITE_2080045 [Thielavia terrestris NRRL 8126]
gi|347002698|gb|AEO69098.1| hypothetical protein THITE_2080045 [Thielavia terrestris NRRL 8126]
Length = 1040
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 192/628 (30%), Positives = 322/628 (51%), Gaps = 84/628 (13%)
Query: 27 KKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
++R +F+ + V D++ A+RLILP DR+RG YGLKE+ + L+ + + ++S
Sbjct: 102 QRRHIIERFMARWRADVGPDFYPAMRLILPDKDRDRGVYGLKENTIGKLLVKVMKIDRNS 161
Query: 85 ADAVRLINWR--------------------KGGAAPNAGNFPMVAAEVLQRRQGMIS-GG 123
D L++W+ GG+ +AG+F E++ +RQ G
Sbjct: 162 EDGYALMHWKLPGHAGGGGGRFGGGAGGGGGGGSRGSAGDFAGRCFEIVSKRQMRTEPGN 221
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
TI E+N +LDRLA + AE++ + + NA+E+ W++ IILKD+K+G +E++
Sbjct: 222 FTIGEVNVMLDRLAGASGEAEQLPIFEEFYQGMNAEELMWLVRIILKDMKVGATERTFLG 281
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAWRK 241
+HPDAE LF+V+ L+ VC +L D R ++Q+ + + +PQLA + K
Sbjct: 282 LWHPDAEALFSVSSSLRRVCWELYDPEFRLEQQETGVTLMSCFQPQLAQ--FQMTTTFAK 339
Query: 242 L--------HGKEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YG---- 281
L E IE K DG+R+Q+H G ++SR D++ YG
Sbjct: 340 LVANLGVTEENPEFWIEEKLDGERMQMHMQEDDSVPGGYRFAFWSRKAKDYTYLYGSGLE 399
Query: 282 ---HAMSKIIEQ--NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQ 335
A+++ ++ + V ILDGEM+ WD +++ FG+ + A + ++ + +
Sbjct: 400 DDNSALTRHLKNAFHSGVRNLILDGEMITWDPEVDKIVPFGTLKTAALEQQKNPFQNGPR 459
Query: 336 LCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW 395
Y FD+L + D S+ +L +RH L++ VK RLE + P
Sbjct: 460 PLYRVFDILLLNDKSLTEYTLADRHRALERAVKGEPRRLE-----------IHPYE---- 504
Query: 396 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDV 454
A + D +E ++ + EG+VLK+ S+++ R+ W+K+KPEY+ G LD
Sbjct: 505 --TATSADAIEPLLRKVVAEASEGLVLKNPRSRYQLNSRNNDWIKVKPEYMSEFGESLDC 562
Query: 455 LIIGGYYGSGRRGGEVAQFL--VALAE---RPAPDTYPRRFISFCRVGTGLSDEELDAVV 509
++IGGYYGSGRRGG ++ FL V ++E + + +SFC+VG G E+ +
Sbjct: 563 VVIGGYYGSGRRGGTLSSFLCGVRVSENFVKSGAAASREKCLSFCKVGGGFKAEDYGEIR 622
Query: 510 TKLKPYFRKYEYPKRAPPS-FYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSE 565
+ +R ++ PPS F ++ + ERPDVWI P +S++LS+ + S+
Sbjct: 623 HHTEGKWRDWDAAN--PPSEFIELGGGERLQYERPDVWIR-PSESVVLSVKA-ASFAPSD 678
Query: 566 VFSAPYSLRFPRIDRVRYDKPWHDCLDV 593
F+ ++LRFPR ++R DK W +DV
Sbjct: 679 QFATGWTLRFPRFRKLRLDKAWDAAMDV 706
>gi|242216175|ref|XP_002473897.1| predicted protein [Postia placenta Mad-698-R]
gi|220726997|gb|EED80930.1| predicted protein [Postia placenta Mad-698-R]
Length = 805
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 178/573 (31%), Positives = 285/573 (49%), Gaps = 114/573 (19%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVL 70
VL +LF+ +Q ++ K R+ LD++ + DRER YGLKE L
Sbjct: 43 VLAALFDKLQ----GERRPEKRRRLLDSWFNK--------------DRERAVYGLKEKNL 84
Query: 71 ANCLIDALGMSKDSADAVRLINWRKGGA-APNAGNFPMVAAEVLQRRQGMISGGLTIKEL 129
A I + ++ DA+R++NW++ ++G+FP V EV+ +R ++ G LTI EL
Sbjct: 85 AKIYIKLIPLNPRDPDAIRMLNWKRPTERNQSSGDFPSVLYEVISKRSSVVEGTLTIHEL 144
Query: 130 NDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDA 189
ND LD ++ + + T ++E +WI IILKD+++ + E ++F FHPDA
Sbjct: 145 NDHLDEISKN------------MGHSTTSEEQRWIARIILKDMQISVKETTVFAVFHPDA 192
Query: 190 EDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVI 249
LFN D+K + +L D P+L +++ G +I
Sbjct: 193 HALFNTCSDIKKIAWELWD-----------------PKL-----------KEMQGSSFII 224
Query: 250 ECKFDGDRIQIHKNGSEIHYFSRSFLDH---SEYGHAMSKIIEQNVL-----------VD 295
E K DG+R+Q+HK G+E Y S S+ + +Y + K + + L VD
Sbjct: 225 EEKLDGERVQLHKRGNEYFYCSSSWATNRKGKDYTYLYGKHVGEGSLTPWIHKAFDARVD 284
Query: 296 RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQ----LCYFAFDVLYVGDTSV 351
ILDGEMLVWD R FG+ + A ++DR+ L FD+LY+ T +
Sbjct: 285 EIILDGEMLVWDPVSERNLPFGTLKTAALGQFVACNTDRRKSVLLAPAIFDLLYLNGTPL 344
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+++SLK R L+ +K GR+E V G D+V ++
Sbjct: 345 LNKSLKFRKRNLRACLKEVPGRMEFAVEYEG-----------------RTADDVRTRMED 387
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLK---------LKPEYIRA-GSDLDVLIIGGYY 461
+ +R EG+V+K S++ R+ W+K +KPEY+ + G +DV+++ G Y
Sbjct: 388 IMASRGEGLVIKHPNSQYVLSGRNSDWIKASCWTRGFNVKPEYMDSMGETVDVIVVAGNY 447
Query: 462 GSGRRGGEVAQFLVALAE--RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
G+GRR G V+ + A+ + RPA + P ++ +F R+GTGLS D + + KP+ K
Sbjct: 448 GTGRRSGGVSTLVCAVVDDRRPADEVEP-KYSTFVRIGTGLS--YADYIWVRQKPW--KT 502
Query: 520 EYPKRAPPSFYQVT-NNSKERPDVWIESPEKSI 551
PK PPSF QV S+++ DV++E P++SI
Sbjct: 503 WDPKN-PPSFLQVAKKGSEDKGDVYLE-PQESI 533
>gi|24641829|ref|NP_572907.1| Ligase4 [Drosophila melanogaster]
gi|7292907|gb|AAF48298.1| Ligase4 [Drosophila melanogaster]
gi|221307626|gb|ACM16689.1| FI02888p [Drosophila melanogaster]
Length = 918
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 200/706 (28%), Positives = 329/706 (46%), Gaps = 92/706 (13%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYC-------------------DSVDYFSALRLI 52
+ SLF I+ T+ A K + + +++C + ++S LRL+
Sbjct: 14 ICSLFEKIKATQKVANKEEVLKSYYESFCRHRESFRRQTGLNNDQPEDGASSFYSVLRLL 73
Query: 53 LPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEV 112
LP D R +YGL+ + L I L + DS+DA+RL + R G + G+ V V
Sbjct: 74 LPGADTGRDTYGLQITALGRLYIRVLQLPTDSSDAIRLQH-RNGNMYRDYGD---VVYSV 129
Query: 113 LQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDL 172
L+ R L +KE++ +LD +A+ + ++ ++ ++ + +E KW+I ++LK L
Sbjct: 130 LKPRCFNPPSNLRLKEIHQMLDTIANEDTEVKQQQLIR-FTEQASPEEQKWLIRLLLKSL 188
Query: 173 KLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKA--------- 223
LGI E+ IF HP A+D++ DL VC L DR + KA
Sbjct: 189 GLGIGEQKIFGVLHPKAQDIYQRCSDLGHVCNLLADRTTDLDASSSKDSKAAVKFVNLNS 248
Query: 224 -------VRPQLAMRI-GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFL 275
+RP L R GD + + +E K DG+R Q+H + Y SR+ +
Sbjct: 249 VIRPFHQIRPMLCERFPGDIQEL---MQSDVLYLETKMDGERFQLHIDRGRFMYISRNGV 305
Query: 276 DHS-EYGHAMSKIIEQNVL-------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR 327
D++ +GH+ L ++ ILDGEM+VWDT+ RF E G N ++
Sbjct: 306 DYTRNFGHSYDHGTLTPKLRGLLPLGLESIILDGEMMVWDTNKLRFREKGENTDVKSLKP 365
Query: 328 DGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHV 387
+G Q C+ +D+LY S++ + +R LQK++ G L+ +
Sbjct: 366 EG---SWQPCFVVYDLLYFNGQSLLDHTYIQRAYKLQKLIVEQSGVLQLM--------RA 414
Query: 388 RPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDR-SGKWLKLKPEYI 446
R G +V E + F++ +++ EGIVLK GS+++PG R G W K K +YI
Sbjct: 415 RKIG---------SVQEFNELFQQALDSHAEGIVLKKQGSRYQPGVRLGGGWYKDKADYI 465
Query: 447 RAG-SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL 505
+ ++ DVLIIG +Y R+ V FL+ + + PAP R F +G ++ +
Sbjct: 466 KGLITEFDVLIIGAFY--NRKRTFVDSFLLGVLQ-PAPPGSSNRPEVFS-IGVVANNTKQ 521
Query: 506 DAVVT-KLKPYFRKYEYPKRAPPSFYQVTNNSKER---PDVWIESPEKSIILSITSDIRT 561
V+ LKP++ ++ PP ++ KER PD+WIE P+ S+IL + +
Sbjct: 522 RGVLNHTLKPHW--HDVVNEPPPLWFHY--KPKERSGCPDLWIE-PQNSVILQVKAADLA 576
Query: 562 IRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQD--D 619
F+ SL FPR + R DK W +C+ ++ F +L + K L+D
Sbjct: 577 PNGAFFTRK-SLHFPRTEMKRDDKTWSECMTLKEFNDLCGGPLAIKKLNKRQLRLEDVTT 635
Query: 620 KPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
K KQ R + E+ + + + + D S + +F + FCIL
Sbjct: 636 KRKQMRMT-PSERSRLGLA-VYEKRYDASTSASTSKLFDGLSFCIL 679
>gi|195173849|ref|XP_002027697.1| GL22420 [Drosophila persimilis]
gi|194114643|gb|EDW36686.1| GL22420 [Drosophila persimilis]
Length = 916
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 199/706 (28%), Positives = 330/706 (46%), Gaps = 92/706 (13%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYC-------------------DSVDYFSALRLI 52
+ LF ++ K K R + +++C S + S LRL+
Sbjct: 12 VCELFEKVKAAKKVQDKEDVLRSYYESFCRHREAFRQAAGLTDEQSENGSSSFHSVLRLL 71
Query: 53 LPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEV 112
LPS D R +YGL+ + L L +++DS DA+ ++ R G + + G+ V V
Sbjct: 72 LPSADTRRDNYGLQITALGRLYTRVLQLTRDSRDAI-MLQHRTGSSFRDYGD---VVYAV 127
Query: 113 LQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDL 172
L R L + ++++LD +A+ E+ + K L ++ +A+E KW+I I+LK L
Sbjct: 128 LVSRCFNPPSDLRLNAIHEMLDTIAN-EDTSVKEQELIRFTEQASAREQKWLIRILLKSL 186
Query: 173 KLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVG----------- 221
LGI E+ IF HP+A+D++ DL VC + D+ + D ++
Sbjct: 187 GLGIGEQRIFGVLHPNAKDIYQRCSDLSHVCNLVADKVSDLEVSDTKITGNSHPSTVNLN 246
Query: 222 ------KAVRPQLAMRI-GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF 274
+RP L R GD + + +E K DG+R Q+H + Y SR+
Sbjct: 247 AVIRPFHQIRPMLCERFPGDIQEL---MQSDVLYLETKMDGERFQLHIDRGRFMYLSRNG 303
Query: 275 LDHS-EYGHAMSKIIEQNVL-------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAA 326
+D+S +G + S+ L + ILDGEM+VWDT+ R+ E G N ++
Sbjct: 304 VDYSNNFGESYSRGTLTPQLRGLLPLGLQTIILDGEMMVWDTNQKRYREKGENTDVK--- 360
Query: 327 RDGLSSDRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLN 384
L DR C+ +D+LY S++ + +R LQK++ +G L+ +
Sbjct: 361 --NLKPDRSWRPCFVVYDLLYFNGQSLLDLTYIQRSYKLQKLIGEQQGVLQLM------- 411
Query: 385 SHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDR-SGKWLKLKP 443
+G S ++E K F++ +++ EGIVLK S ++PG R G W K K
Sbjct: 412 -----RGTKIGS-----IEEFNKLFQQALDSNAEGIVLKKQSSIYQPGVRVGGGWYKDKA 461
Query: 444 EYIRAG-SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSD 502
+YI+ ++ DVLIIGG+Y R+ + FL+ + + P ++ R + +G +++
Sbjct: 462 DYIKGLITEFDVLIIGGFY--NRKRTFIDSFLLGVLQ-PMANSDSRHEVY--SIGC-VTN 515
Query: 503 EELDAVVTK--LKPYFRKYEYPKRAPPSFYQVTNNSK-ERPDVWIESPEKSIILSITSDI 559
AVV L+P++ ++ K PP +Y N K PD+WI+ P SIIL + +
Sbjct: 516 NTRQAVVLNHTLRPHW--HDTTKEPPPLWYHYMANEKIGSPDLWID-PHNSIILQVKAAD 572
Query: 560 RTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
T S F P +L FPRI+ R DK W++C+ +Q F +L S + K + L D
Sbjct: 573 LTPNS-AFYTPKALHFPRIELKRDDKAWNECMTLQEFNQLCEGSGPIKKLNKRHLCLDDL 631
Query: 620 KPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
K+ R ++ + + + DV T +F + FCIL
Sbjct: 632 TTKRKRLRMTPAERRRLGLAIYEKRYDVGTSSSCTKLFEGLSFCIL 677
>gi|21430702|gb|AAM51029.1| RH46576p [Drosophila melanogaster]
Length = 918
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 200/706 (28%), Positives = 328/706 (46%), Gaps = 92/706 (13%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYC-------------------DSVDYFSALRLI 52
+ SLF I+ T+ A K + + +++C + ++S LRL+
Sbjct: 14 ICSLFEKIKATQKVANKEEVLKSYYESFCRHRESFRRQTGLNNDQPEDGASSFYSVLRLL 73
Query: 53 LPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEV 112
LP D R +YGL+ + L I L + DS+DA+RL + R G G+ V V
Sbjct: 74 LPGADTGRDTYGLQITALGRLYIRVLQLPTDSSDAIRLQH-RNGNMYRGYGD---VVYSV 129
Query: 113 LQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDL 172
L+ R L +KE++ +LD +A+ + ++ ++ ++ + +E KW+I ++LK L
Sbjct: 130 LKPRCFNPPSNLRLKEIHQMLDTIANEDTEVKQQQLIR-FTEQASPEEQKWLIRLLLKSL 188
Query: 173 KLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKA--------- 223
LGI E+ IF HP A+D++ DL VC L DR + KA
Sbjct: 189 GLGIGEQKIFGVLHPKAQDIYQRCSDLGHVCNLLADRTTDLDASSSKDSKAAVKFVNLNS 248
Query: 224 -------VRPQLAMRI-GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFL 275
+RP L R GD + + +E K DG+R Q+H + Y SR+ +
Sbjct: 249 VIRPFHQIRPMLCERFPGDIQEL---MQSDVLYLETKMDGERFQLHIDRGRFMYISRNGV 305
Query: 276 DHS-EYGHAMSKIIEQNVL-------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR 327
D++ +GH+ L ++ ILDGEM+VWDT+ RF E G N ++
Sbjct: 306 DYTRNFGHSYDHGTLTPKLRGLLPLGLESIILDGEMMVWDTNKLRFREKGENTDVKSLKP 365
Query: 328 DGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHV 387
+G Q C+ +D+LY S++ + +R LQK++ G L+ +
Sbjct: 366 EG---SWQPCFVVYDLLYFNGQSLLDHTYIQRAYKLQKLIVEQSGVLQLM--------RA 414
Query: 388 RPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDR-SGKWLKLKPEYI 446
R G +V E + F++ +++ EGIVLK GS+++PG R G W K K +YI
Sbjct: 415 RKIG---------SVQEFNELFQQALDSHAEGIVLKKQGSRYQPGVRLGGGWYKDKADYI 465
Query: 447 RAG-SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL 505
+ ++ DVLIIG +Y R+ V FL+ + + PAP R F +G ++ +
Sbjct: 466 KGLITEFDVLIIGAFY--NRKRTFVDSFLLGVLQ-PAPPGSSNRPEVFS-IGVVANNTKQ 521
Query: 506 DAVVT-KLKPYFRKYEYPKRAPPSFYQVTNNSKER---PDVWIESPEKSIILSITSDIRT 561
V+ LKP++ ++ PP ++ KER PD+WIE P+ S+IL + +
Sbjct: 522 RGVLNHTLKPHW--HDVVNEPPPLWFHY--KPKERSGCPDLWIE-PQNSVILQVKAADLA 576
Query: 562 IRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQD--D 619
F+ SL FPR + R DK W +C+ ++ F +L + K L+D
Sbjct: 577 PNGAFFTRK-SLHFPRTEMKRDDKTWSECMTLKEFNDLCGGPLAIKKLNKRQLRLEDVTT 635
Query: 620 KPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
K KQ R + E+ + + + + D S + +F + FCIL
Sbjct: 636 KRKQMRMT-PSERSRLGLA-VYEKRYDASTSASTSKLFDGLSFCIL 679
>gi|452821657|gb|EME28685.1| DNA ligase 4 [Galdieria sulphuraria]
Length = 913
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 170/571 (29%), Positives = 281/571 (49%), Gaps = 46/571 (8%)
Query: 43 VDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNA 102
+D FS LRL+LP LD +R S+G+KE LA I + S DA RL W+
Sbjct: 53 LDSFSILRLLLPELDNDRRSFGMKERGLAELYISVFELDPSSFDAQRLRRWQDPTVQQQT 112
Query: 103 GNFPMVAA------EVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKT 156
G P + E + R + + LTI ++N+LL+ L + + ++ + ++ +
Sbjct: 113 GQIPAIPGNFFSVLEAVLRHRCSDTSSLTISQVNELLNELNITLEKEKRKKIFHQIVTEC 172
Query: 157 NAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ 216
E WI IILK + LG+ +SI FHP A + + + L+ +CE Q
Sbjct: 173 TVTENIWISRIILKQMHLGLRFESILKWFHPSALEDYRLRHSLRRMCEDCFQPGFYIVSQ 232
Query: 217 DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLD 276
D+ +G+ LA R + L +E KFDG+R+Q+HK G +I FSR+ LD
Sbjct: 233 DVILGQPASVSLAKRQENLQRI-PYLMSDGFFLEPKFDGERLQLHKKGEDIQCFSRNALD 291
Query: 277 HSE-YGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG-LSSDR 334
+ YG + + V C+LDGE+L+++ F F + A+D L +
Sbjct: 292 TTHLYGPHLKTAVLLCVDAQDCVLDGEVLLYNVDKQAFEHFDQIRHYISIAKDTKLDDNF 351
Query: 335 QLCYFAFDVLYVGDT-----SVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
+ Y FDVLYV SV+ L+ R E+L+ +V+P ++ + G
Sbjct: 352 LITYMIFDVLYVDQNQNVPPSVVSFPLETRKEILKGIVRPFHSQIRLVPYKEGT------ 405
Query: 390 QGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYIR- 447
V+++++ ++ IE + EG+V+K+ + G R + +KLKP+Y
Sbjct: 406 -----------TVEDIKQAMEDFIEQKYEGVVVKNKKKPYLLGKRDDEVMIKLKPDYFND 454
Query: 448 AGSDLDVLIIGGYYGSG----RRGGEVAQFLVALAERPAPD---TYPRRFISFCRVGTGL 500
DLDVLI+G + G+G R G+ + FL+ + E+ + +I +VG+G
Sbjct: 455 LVHDLDVLILGAFIGTGYSKTTRIGKPSHFLIGILEKDIEEQDRNVEVSWIVIGKVGSGY 514
Query: 501 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVT-NNSKERPDVWIESPEKSIILSITSDI 559
S E+L+ + KL P+++ Y+ K+APP + + + PD WIE P SI+L+I +
Sbjct: 515 SYEQLEQLQHKLAPFWKPYD--KKAPPEHLKHSLLRADGVPDFWIE-PCHSIVLTIYA-- 569
Query: 560 RTIRSEVFSAPYSLRFPRIDRVRYDKPWHDC 590
+R + Y++RFPR+ +R+DK W +C
Sbjct: 570 YEVRPSAIYSGYAVRFPRVANIRWDKRWFEC 600
>gi|358334728|dbj|GAA27477.2| DNA ligase 4, partial [Clonorchis sinensis]
Length = 959
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 185/655 (28%), Positives = 318/655 (48%), Gaps = 95/655 (14%)
Query: 45 YFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNA-- 102
++ LRL+LP DR R +YGL+E+ L+ I A G++ + A L++ G + N
Sbjct: 73 FYPLLRLMLPQFDRARPAYGLRETALSRLYIKAFGIASTGSVAQSLMH--PTGQSTNLTR 130
Query: 103 -GNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEM 161
+F + +V++ R L +K++N+LLDRLA +++ E++S + ++ A E
Sbjct: 131 NADFADLLFDVVRNR-CREDNVLNLKDVNELLDRLAGAQSADERLSTMQNFMRSATALEH 189
Query: 162 KWII-MIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQR------HK 214
KW++ +++ ++ G++ ++ H HP A DL++VT DL L+C+++ D + +
Sbjct: 190 KWLVRLVVRRESGCGMTAANVLHCLHPAAPDLWDVTQDLILLCQRIADLDPKVSPSLSSA 249
Query: 215 RQD---IEVGKAVRPQLAMR------IGDAHAAWRKLHGK-----EVVIECKFDGDRIQI 260
QD + + RP L R + + A L G +++E K+DG+R+Q+
Sbjct: 250 NQDGATVSLFVPFRPMLCERSDSPDLLCASALALCTLGGTVPTELGLMLETKYDGERVQV 309
Query: 261 HKNGSEIHYFSRSFLD-HSEYGHAMSKIIEQNVL---------VDRCILDGEMLVWDTSL 310
HK+G+ Y+SR+ L+ + YG + I V CI+DGEM+ + T
Sbjct: 310 HKSGTSYRYWSRNCLEWTASYGANGDQDIGSLTPRLHKAFAPHVQSCIIDGEMMAYSTWT 369
Query: 311 NRFAEFGSNQEIAKAARDG-------LSS----DRQLCYFAFDVLYVGDTSVIHQSLKER 359
+ + ++ ++ D LS+ + Q C FD+LY+ + ++++ ER
Sbjct: 370 DVIMPKTTGFDVKRSQLDSDLLRDPSLSAEDAENYQPCLIVFDLLYLNGEVITNKTVVER 429
Query: 360 HELLQKV--VKPSKGRLETLVPDHGLNSHVRPQGEPC---------------WSLVAHNV 402
LL +V ++P+ + P N + C W V
Sbjct: 430 KRLLAQVFGLEPTANSCVSERPLASANDGSQTPPVLCPPPLSVIDGTVYLSGWCQVPIMA 489
Query: 403 DEVEKFFKETIENRDEGIVLK-DLG-SKWEPGDRS-GKWLKLKPEYIRAG-SDLDVLIIG 458
D V K F ++ R EG+V K +G S + PG R G W KLKP+Y+ DLD L++G
Sbjct: 490 DHVAKVFDHLMDYRQEGLVAKLTVGRSPYLPGRRQRGGWWKLKPDYVSGLLEDLDCLVVG 549
Query: 459 GYYGSG------RRGGEVAQFLVALAERPAPDTYPRR-------FISFCRVGTGLSDEEL 505
GY+ S + V QFL A+ D ++ F+SFCRV +GL+ ++
Sbjct: 550 GYFSSASGSKHLNQSKRVRQFLCAVR---GSDNLSQQDGLSLPCFLSFCRVSSGLTVKQF 606
Query: 506 DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSE 565
+ KL P+++ ++ KR F + + ERPDVWI +P+ S+ L + + I S
Sbjct: 607 KELNHKLGPHWKPFDR-KRPNTGFTEWLKVTTERPDVWI-APQHSVTLQLHAS-ELISSG 663
Query: 566 VFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNG-------TTQKGKEY 613
++ + RFPR+ VR DKPW DCL ++ V L + G Q+G++Y
Sbjct: 664 SYATGLTARFPRVVAVRDDKPWQDCLTMEELVRLNTETQGKLAVRRLAKQEGRDY 718
>gi|340959653|gb|EGS20834.1| hypothetical protein CTHT_0026720 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1032
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 187/612 (30%), Positives = 310/612 (50%), Gaps = 86/612 (14%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWR--------- 94
D++ A+RLILP DR+RG YGLKES + L+ + + + S D L++W+
Sbjct: 114 DFYPAMRLILPDKDRDRGVYGLKESAIGRLLVKVMKIDRHSEDGYALMHWKLPGGAGGWK 173
Query: 95 -------------KGGAAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLASSE 140
G A AG+F E++ +R G LTI ++N +LDRLA +
Sbjct: 174 FGGGGGGGGGGGGNGKGAGTAGDFAARCYEIVGKRAMRTEPGNLTIADVNVMLDRLARAN 233
Query: 141 NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLK 200
AE++ + ++ NA+E+ W++ IILKD+K+G +E++ F+ +HPDAE LF+V+ L+
Sbjct: 234 GEAEQLPIFEEFYRRMNAEELMWLVRIILKDMKVGATERTFFNLWHPDAEALFSVSSSLR 293
Query: 201 LVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVI--------E 250
VC +L D R ++++ + + +PQLA ++ KL V E
Sbjct: 294 RVCWELYDPEFRLEQEETGVTLMSCFQPQLAQ--FQMQGSFAKLVANLGVTEEEPEFWIE 351
Query: 251 CKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVL--------- 293
K DG+R+Q+H G ++SR D++ YG+++ +++ L
Sbjct: 352 EKLDGERMQMHMMEDESVPGGFRFAFWSRKAKDYTYLYGNSLED--DKSALTRHLKNAFH 409
Query: 294 --VDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYFAFDVLYVGDTS 350
V ILDGEM+ WD +++ FG+ + A + ++ +S + Y FD+L + D S
Sbjct: 410 PGVRNLILDGEMITWDPEVDKIMPFGTLKTAALEQQKNPFASGPRPLYRVFDILLLNDKS 469
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
+ +L +R L++ VK RLE + P + A + D +E +
Sbjct: 470 LTDYTLADRRRALERAVKGVPRRLE-----------IHPYEK------ATSADAIEPALR 512
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGE 469
+ I EG+VLK+ S++ R+ W+K+KPEY+ G LD +IIGGYYGSGRRGG
Sbjct: 513 KIISESSEGLVLKNPRSRYRLNSRNNDWIKVKPEYMSEHGESLDCVIIGGYYGSGRRGGT 572
Query: 470 VAQFLVALA-----ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 524
++ FL + R + + +SFC+VG G E+ + + ++ ++ P
Sbjct: 573 LSSFLCGVRVSENFTRSGAASKTEKCLSFCKVGGGFKGEDYAEIRHHTEGKWKDWD-PSN 631
Query: 525 APPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 581
P + ++ + ERPDVWI P +S+++SI + S+ F+ Y+LRFPR +
Sbjct: 632 PPSEYIELGGGERLQHERPDVWIR-PSESVVISIKA-ASFGPSDQFATGYTLRFPRFRAL 689
Query: 582 RYDKPWHDCLDV 593
R DK W +DV
Sbjct: 690 RLDKAWDQAMDV 701
>gi|170038202|ref|XP_001846941.1| DNA ligase 4 [Culex quinquefasciatus]
gi|167881754|gb|EDS45137.1| DNA ligase 4 [Culex quinquefasciatus]
Length = 875
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 182/626 (29%), Positives = 295/626 (47%), Gaps = 67/626 (10%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK---GGAAPNA 102
F LRL+LP DRER SYG++ L + I LG+S+ S +A +L + + GG A ++
Sbjct: 7 FPVLRLLLPGADRERDSYGVRVKSLRDLYIKVLGISESSTEARKLSGYDEETGGGGASSS 66
Query: 103 GNFPMVAAEVLQRRQGMI--SGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTN 157
+F A V + QG G LT+ E+N+ LD + E+ + L L+ +
Sbjct: 67 EDF---ADRVFRLMQGRCPPEGSLTVWEVNERLDAIGGHYVNGERRRIGEELERLVGGMS 123
Query: 158 AQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKL----KDRNQRH 213
+ KW+I I+LK+L+LG+S I +H A L++ +L VCE +
Sbjct: 124 QVDQKWLIRILLKNLRLGMSLGKILGVYHAKAGQLYDRFSNLSKVCEVVESGEGLEELGE 183
Query: 214 KRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRS 273
+E+ V+P L R+ D L E +E K DG+R QIHK+G YFSR+
Sbjct: 184 GGGSVELFHPVKPMLCQRV-DLKLVDGMLKRDEYWLETKMDGERFQIHKDGVVFKYFSRN 242
Query: 274 FLDHSE--------YGHAMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIA 323
++SE G ++ + + V ILDGEM+V+D + + N ++
Sbjct: 243 SYEYSEVFGVNRNQVGSTLTPFLADLLASNVQSVILDGEMMVFDKVALIYRDKSENTDVK 302
Query: 324 KAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGL 383
D + + C+ +DVL++ S+I ER LL ++KP G L T
Sbjct: 303 AVKSD--NPTLRPCFCVYDVLFLNGKSLIAVPYAERIRLLGTLIKPKVGVLTT------- 353
Query: 384 NSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKP 443
C + + + + + + I+ EG+V+K S + P +R+ W K+KP
Sbjct: 354 ----------CKRIKVESSEHLVELLNQAIDTHQEGVVIKKQDSTYSPNERNAGWYKIKP 403
Query: 444 EYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSD 502
+YI SD D+LI+GG+Y + R V +LV + ++ DT F++ +VG GLS
Sbjct: 404 DYIDNLVSDFDLLIMGGFYNAKR--SFVNTYLVGVLDKSTEDT----FLAVTKVGIGLSV 457
Query: 503 EELDAVVTKLKPYFRKYEYPKRA-------PPSFYQVTNNSKERPDVWIESPEKSIILSI 555
++ + T L+P++R+ + + PP + PDVWI P SI+L +
Sbjct: 458 DQWRTLNTSLRPHWREVTFRREGRSKISEEPPGLRW----GQTAPDVWI-PPNHSIVLQL 512
Query: 556 TSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGG 615
+RS F+ Y++RFPRI +R DK + D F L ++ + K +
Sbjct: 513 KGS-ELVRSSSFATSYTIRFPRITAIRSDKDFKDVCTSDEFARLCSANTTVAKLAKRHVT 571
Query: 616 LQDDKPKQFRSSRKGEKKNVSIVPSH 641
D P +SRK +K +S + S
Sbjct: 572 AADLLPTSGTTSRK--RKQISPLKSR 595
>gi|310789638|gb|EFQ25171.1| DNA ligase I [Glomerella graminicola M1.001]
Length = 986
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 208/688 (30%), Positives = 342/688 (49%), Gaps = 75/688 (10%)
Query: 21 KTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDAL 78
K P ++R +F+ + + V D + A RLI+P DR+RG+YGLKE+ + L+ +
Sbjct: 72 KLSPQEQRRHIIERFISRWRNEVGNDIYPAFRLIMPDKDRDRGNYGLKENAIGKLLVKLM 131
Query: 79 GMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLD 134
+ K+S D L++W+ G A+ AG+F EVL +R G +TI E+N+LLD
Sbjct: 132 KIDKNSDDGYSLLHWKLPGNTAASRLAGDFAGRCFEVLSKRPMRTEVGDMTIAEVNELLD 191
Query: 135 RLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFN 194
+LA+S E + V ++ NA+E+ W+I I+LK +K+G +E++ +HPD E LF+
Sbjct: 192 KLAASTGELENLEVFEVFYERMNAEELMWLIRIVLKQMKVGATERTFLGLWHPDGEALFS 251
Query: 195 VTCDLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLAMRIGDAHAAWRKL--------HG 244
V+ L+ VC +L D R +++D V + +PQLA ++++K+
Sbjct: 252 VSSSLRRVCWELYDPEARLEQEDTGVCLMQCFQPQLAQ--FQMPSSFQKMVDYLRPTEED 309
Query: 245 KEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVL--- 293
E IE K DG+R+Q+H G ++SR D++ YG+ + E+ L
Sbjct: 310 PEFWIEEKLDGERMQMHVTQDSSVPGGWRFCFWSRKAKDYTYLYGNGLRD--EKGALTRH 367
Query: 294 --------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGL--SSDRQLCYFAFDV 343
V ILDGEM+ WD +++ FG+ + A ++ +S + Y FD+
Sbjct: 368 LGDAFATGVRNLILDGEMITWDPEVDKIMPFGTLKTATLAEQNNPYNNSGPRPLYRVFDI 427
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
L + D + +L++R L K VK RLE H VA + D
Sbjct: 428 LLLNDKPLTQYTLRDRRLALSKAVKGVHRRLEI----HEYE-------------VATSPD 470
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYG 462
+E ++ + EG+VLK+ S + R+ WLK+KPEY+ G LD ++IGGYYG
Sbjct: 471 AIEPLLRKVVAEASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCVVIGGYYG 530
Query: 463 SGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
SGRRGG ++ FL L P + SF +VG G + + + + ++
Sbjct: 531 SGRRGGALSSFLCGLRVSENHIQAGANPEKCFSFFKVGGGFCANDYAEIRHRTDGKWLQW 590
Query: 520 EYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 577
+ ++ P + ++ + ERPDVWI + ++ + + I + S+ FS ++LRFPR
Sbjct: 591 D-TRKPPVEYIELAGGDRQFERPDVWIRPRDSVVVEAKAASIGS--SDQFSLGFTLRFPR 647
Query: 578 IDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI 637
R+R DK W D L VQ F++L ++ KE +++ R S K K+ V+I
Sbjct: 648 FRRLRTDKNWDDGLSVQEFLDL---RKRVEEEAKEKTMSVENRK---RKSVKRVKREVTI 701
Query: 638 VPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+ L K + +F + FC+L
Sbjct: 702 AGTENLPVQFEGQK--SKLFDGLEFCVL 727
>gi|194895415|ref|XP_001978248.1| GG19495 [Drosophila erecta]
gi|190649897|gb|EDV47175.1| GG19495 [Drosophila erecta]
Length = 927
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 196/704 (27%), Positives = 327/704 (46%), Gaps = 88/704 (12%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVD-------------------YFSALRLI 52
+ SLF ++ +K A K + + +++C + ++S LRL+
Sbjct: 14 ICSLFEKLKASKKVASKEEVLKSYYESFCRHRESFRRQTGLNDEQPENGVSSFYSVLRLL 73
Query: 53 LPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEV 112
LP D R +YGL+ + L I L ++ DS+DA++L + R G + G+ V V
Sbjct: 74 LPGADTGRDTYGLQITALGRLYIRVLQLTTDSSDAIKLQH-RTGNMYRDYGD---VVYSV 129
Query: 113 LQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDL 172
L+ R L + ++ +LD +A+ + ++ ++ ++ + +E KW+I ++LK L
Sbjct: 130 LKPRCFNPPSDLRLNHIHQMLDTIANEDTEVKQQQLIR-FTEQASPEEQKWLIRLLLKSL 188
Query: 173 KLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKA--------- 223
LGI E+ IF HP A+D++ DL VC L DR + KA
Sbjct: 189 GLGIGEQKIFGVLHPKAQDIYQRCSDLGHVCNLLADRTTDLDASTSKDSKAAVKFVNLNS 248
Query: 224 -------VRPQLAMRI-GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFL 275
+RP L R GD + + +E K DG+R Q+H + Y SR+ +
Sbjct: 249 VIRPFHQIRPMLCERFPGDIQEL---MQSDVLYLETKMDGERFQLHIDRGRFMYISRNGV 305
Query: 276 DHS-EYGHAMSKIIEQNVL-------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR 327
D++ +GH+ L ++ ILDGEM+VWDT+ RF E G N ++
Sbjct: 306 DYTRNFGHSYDHGTLTPKLRGLLPLGLESIILDGEMMVWDTNHLRFREKGENTDVKNLKP 365
Query: 328 DGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHV 387
+G Q C+ +D+LY S++ + +R LQK++ G L+ +
Sbjct: 366 EG---SWQPCFVVYDLLYFNGQSLLDHTYIQRAYKLQKLIVEQSGVLQLM--------RA 414
Query: 388 RPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDR-SGKWLKLKPEYI 446
R G +V E + F++ +++ EGIVLK GS++ PG R G W K K +YI
Sbjct: 415 RKIG---------SVKEFNELFQQALDSHAEGIVLKKQGSRYHPGVRLGGGWYKDKADYI 465
Query: 447 RAG-SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL 505
+ ++ DVLIIG +Y R+ V FL+ + + PAP R F +G ++ +
Sbjct: 466 KGLITEFDVLIIGAFY--NRKRTFVDSFLLGVLQ-PAPPGSSNRPEVFS-IGVVANNTKQ 521
Query: 506 DAVVT-KLKPYFRKYEYPKRAPPSFYQVTNNSKER-PDVWIESPEKSIILSITSDIRTIR 563
V+ LKP++ ++ PP ++ N + PD+WIE P SIIL + +
Sbjct: 522 RGVLNHTLKPHW--HDVVNEPPPLWFHYKPNERSGCPDLWIE-PHNSIILQVKAADLAPN 578
Query: 564 SEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQD--DKP 621
F+ SL FPR + R DKPW +C+ ++ F +L S + K L+D K
Sbjct: 579 GAFFTRK-SLHFPRTEMKRDDKPWSECMTLKEFNDLCKGSLAIKKLNKRQLRLEDVTTKR 637
Query: 622 KQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
KQ R + E+ + + + + +V + +F + FCIL
Sbjct: 638 KQMRMT-PSERSRLGLA-VYEKRYNVDPSVSSSKLFDGLSFCIL 679
>gi|320590670|gb|EFX03113.1| DNA replication and repair protein [Grosmannia clavigera kw1407]
Length = 1019
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 211/696 (30%), Positives = 342/696 (49%), Gaps = 78/696 (11%)
Query: 21 KTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDAL 78
+ P ++R +F+ + V D++ LRLILP DR+R YGLKE+ + L+ +
Sbjct: 89 RISPHEQRRGVIMRFMSRWRSEVGDDFYPVLRLILPDKDRDRSVYGLKENTIGKLLVKLM 148
Query: 79 GMSKDSADAVRLINWRK---GGAAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLD 134
+ K+S D L++W+ A+ AG+F EVL +R L I ++N LLD
Sbjct: 149 KIDKNSEDGYNLLHWKLPVCAAASSLAGDFAGRCYEVLAKRPLRTEVSDLRIGQVNVLLD 208
Query: 135 RLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFN 194
+LA E++S+ + N +E+ W+I IILK +++G SE++I + +HPD E LFN
Sbjct: 209 KLADCSGEIEQLSIFEVFYQHMNPEELAWLIRIILKQMRIGASERTILNLWHPDGEALFN 268
Query: 195 VTCDLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLAMRIGDAHAAWRKL--------HG 244
V+ L+ VC +L D R ++ + V + +PQLA A+++K+
Sbjct: 269 VSSSLRRVCWELCDLQVRLEQDEAGVALMQCFQPQLAQF--QMPASFQKMVEKLGSTEDD 326
Query: 245 KEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGHAMS---KIIEQNVL 293
+E IE K DG+R+Q+H G ++SR D+++ YGH + Q++
Sbjct: 327 REFWIEEKLDGERMQVHMMEDHTLPGGRRFCFWSRKAKDYTDLYGHGFGDKKAALTQHLR 386
Query: 294 ------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG---LSSDRQLCYFAFDVL 344
V ILDGEM+ WD L++ FG+ + A A++ L + R L + FD+L
Sbjct: 387 LAFTEGVRNLILDGEMITWDPKLDKMVAFGTLKTAALGAQNNPHDLMAPRPL-FRVFDIL 445
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
Y+ D + +L++RH L+K V RLE ++SH L +
Sbjct: 446 YLNDQLLTRYTLRDRHRALEKAVIGVPRRLE-------VHSH----------LATTDPGT 488
Query: 405 VEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGS 463
V+ ++ + + EG+VLK+ S + R+ W+K+KPEY+ G LD ++IGG++GS
Sbjct: 489 VQPMLRQIVADSSEGLVLKNPRSMYRLNSRNDDWIKVKPEYMTEFGESLDCVVIGGFFGS 548
Query: 464 GRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
GRRGG ++ FL L + P + +SF +VG G E D + + E
Sbjct: 549 GRRGGMLSSFLCGLRVSQNQIDSGANPEKCLSFFKVGGGFKAE--DYAEIRHLTEGKWIE 606
Query: 521 YPKRAPPSFY-QVTNN---SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 576
+ PP Y ++ + E+PDVWI P S++LS+ + S+ F+ +LRFP
Sbjct: 607 WDSSNPPRDYIELAGDEAGQAEKPDVWIR-PRDSVVLSVKAS-SVSPSDTFAVRETLRFP 664
Query: 577 RIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVS 636
R R+R D+ W LD F L ++ T++ KE ++ + +Q R S+K V
Sbjct: 665 RFRRLRLDRAWDTALDTDQFRLLRAHADEVTKERKE---MEIENRRQRRPSKKSRLDLVV 721
Query: 637 IVPSHFLQTDVSDIKGE-------TSIFSDMVFCIL 665
S D K ++ FS M FC+L
Sbjct: 722 AGQSRQQGQDAEATKASKPAAASTSNTFSGMEFCVL 757
>gi|453088030|gb|EMF16071.1| DNA ligase 4 [Mycosphaerella populorum SO2202]
Length = 859
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 178/642 (27%), Positives = 318/642 (49%), Gaps = 66/642 (10%)
Query: 63 YGLKESVLANCLIDALGMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGM 119
YGLKE L LI L + K+S D L +W+ G + G+F + + +R M
Sbjct: 2 YGLKEMTLGKMLIRILKIDKNSDDGYSLTHWKLPGVKSTSATTGDFAGRCFDAISKRP-M 60
Query: 120 IS--GGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGIS 177
S G +++ E+N+ LDRL+ ++ + +L + NA+E+ W+I IIL+ +K+G +
Sbjct: 61 RSEPGDMSVAEVNERLDRLSVAQKEENQRPILEEFYSRMNAEELMWLIRIILRQMKVGAT 120
Query: 178 EKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHK--RQDIEVGKAVRPQLA---MRI 232
EK+ F +HPDA++LFN++ L+ VC +L D+ R + + I + + +PQLA M+
Sbjct: 121 EKTFFELWHPDADNLFNISSSLRRVCWELHDKKVRLEGDSRGISLMQCFQPQLAAFQMKT 180
Query: 233 GDAHAAWRKLHGKEVV--IECKFDGDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH 282
+ A ++ + IE K DG+RIQ+H G ++SR D++ YG
Sbjct: 181 FEQMIARMDPTDEDPIFWIEEKLDGERIQLHMIEDDEQPGGVRFCFWSRKAKDYTYLYGS 240
Query: 283 -------AMSKIIEQ--NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSS 332
A+++ I+ N V ILDGEM+ WD + FG+ + A + ++ +
Sbjct: 241 GFQDDDAALTRHIKDAFNSGVRNIILDGEMITWDAQEDCIVGFGTLKTAAIEQQQNPFAG 300
Query: 333 DRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGE 392
+ + FD LY+ D + +L+ R L+ + RLE H
Sbjct: 301 GHRPLFRVFDCLYLNDKPLTQYTLRNRRAALEASITDVHRRLEI----HKY--------- 347
Query: 393 PCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSD 451
L +VE ++ + EG+V+K+ S++ +R+ W+K+KPEY+ G
Sbjct: 348 ----LECKTAADVELELRQAVAEASEGLVMKNPRSEYRLNERNDDWIKVKPEYMTEFGES 403
Query: 452 LDVLIIGGYYGSGRRGGEVAQFLVALAERPA------PDTYPRRFISFCRVGTGLSDEEL 505
LD +++GGY+GSG+RGG + FL L A P +P++ SF +VG G S +
Sbjct: 404 LDCIVVGGYFGSGKRGGHHSSFLCGLYLPSAWRAGLEPHAHPQKTWSFFKVGGGFSASDY 463
Query: 506 DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIR 563
+ + ++ ++ K+ P + ++ + E+PD WI+ PE S+++S+ + +
Sbjct: 464 AQIRHETDGKWKDWDR-KKPPTEWIELGGGDRQHEKPDQWIK-PEDSVVVSVKAASVE-Q 520
Query: 564 SEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQ 623
S+ F ++LRFPR ++R DK W L F+ L +++ K L+ D+ ++
Sbjct: 521 SDQFRTKFTLRFPRFKKLRTDKSWAQALSYDEFMTLKYNAEDQQHDKK----LKVDESRK 576
Query: 624 FRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
R++++ +K ++ T + T +F + FCI+
Sbjct: 577 QRTTKR--QKRELVIQGQECDTQTAYAGPATQVFEGLAFCIM 616
>gi|195478363|ref|XP_002100495.1| GE16147 [Drosophila yakuba]
gi|194188019|gb|EDX01603.1| GE16147 [Drosophila yakuba]
Length = 918
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 196/705 (27%), Positives = 331/705 (46%), Gaps = 90/705 (12%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVD-------------------YFSALRLI 52
+ LF ++ +K A K + + +++C + ++S LRL+
Sbjct: 14 ICGLFEKLKASKKVANKEELLKSYYESFCRHRESFRRQTGLNDDQPENGVSSFYSVLRLL 73
Query: 53 LPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEV 112
LP D R +YGL+ + L I L + DS+DA+RL + R G + G+ V V
Sbjct: 74 LPGADTGRDTYGLQITALGRLYIRVLQLPTDSSDAIRLQH-RTGNMYRDYGD---VVYSV 129
Query: 113 LQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDL 172
L+ R L + ++++LD +A+ + ++ ++ ++ + +E KW+I ++LK L
Sbjct: 130 LKPRCFNPPSDLRLNHIHEMLDTIANEDTEVKQQQLIR-FTEQASPEEQKWLIRLLLKSL 188
Query: 173 KLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKA--------- 223
LGI E+ IF HP A+D++ DL VC L DR + KA
Sbjct: 189 GLGIGEQKIFGVLHPKAQDIYQRCSDLGHVCNLLADRTTDLDASTSKDSKAAVKFVNLNS 248
Query: 224 -------VRPQLAMRI-GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFL 275
+RP L R GD + + +E K DG+R Q+H + Y SR+ +
Sbjct: 249 VIRPFHQIRPMLCERFPGDIQEL---MQSDVLYLETKMDGERFQLHIDRGRFMYISRNGV 305
Query: 276 DHSE-YGHAMSKIIEQNVL-------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR 327
D+++ +GH+ L ++ ILDGEM+VWDT+ RF E G N ++
Sbjct: 306 DYTKNFGHSYDHGTLTPKLRGLLPLGLESIILDGEMMVWDTNQLRFREKGENTDVKSLKP 365
Query: 328 DGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHV 387
+G Q C+ +D+LY S++ + +R LQK++ G L+ +
Sbjct: 366 EG---SWQPCFVVYDLLYFNGQSLLDHTYIQRAYKLQKLIVEQSGVLQLM--------RA 414
Query: 388 RPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDR-SGKWLKLKPEYI 446
R G +V E + F++ +++ EGIVLK S+++PG R G W K K +YI
Sbjct: 415 RKIG---------SVKEFNELFQQALDSHAEGIVLKKQASRYQPGVRLGGGWYKDKADYI 465
Query: 447 RAG-SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL 505
+ ++ DVLIIG +Y R+ V FL+ + + PAP R F +G ++ +
Sbjct: 466 KGLITEFDVLIIGAFY--NRKRTFVDSFLLGVLQ-PAPPGSSNRPEVFS-IGVVANNTKQ 521
Query: 506 DAVVT-KLKPYFRKYEYPKRAPPSFYQVTNNSKER-PDVWIESPEKSIILSITSDIRTIR 563
AV+ LKP++ ++ PP +Y + PD+WIE P S+IL + +
Sbjct: 522 RAVLNHTLKPHW--HDVVNEPPPLWYHYKPKDRSGCPDLWIE-PHNSVILQVKAADLAPN 578
Query: 564 SEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQD--DKP 621
F+ SL FPR + R DKPW++C+ ++ F L S + K L+D K
Sbjct: 579 GAFFTRK-SLHFPRTEMKRDDKPWNECMTLKEFNNLCDGSLAIKKLNKRQLRLEDVTTKR 637
Query: 622 KQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETS-IFSDMVFCIL 665
KQ R + E+ +++ + + + V++ +S +F + FCIL
Sbjct: 638 KQMRMT-PSERSRLAL--AVYEKRYVANPSTSSSKLFDGLSFCIL 679
>gi|195043908|ref|XP_001991714.1| GH11911 [Drosophila grimshawi]
gi|193901472|gb|EDW00339.1| GH11911 [Drosophila grimshawi]
Length = 922
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 191/657 (29%), Positives = 305/657 (46%), Gaps = 75/657 (11%)
Query: 45 YFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGN 104
++ LRL+LP D R +YGL+ + L L + KDS DA+RL + + + +
Sbjct: 64 FYPVLRLLLPGADNSRDNYGLQITALGRLYTRVLQLPKDSDDAIRL----QHRSFSSFRD 119
Query: 105 FPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWI 164
+ V VL R LT+K+++D+LD L +SE+ K L + +AQE KW+
Sbjct: 120 YADVVHAVLLPRCHNEPSNLTLKQVHDMLD-LIASEDTTVKERELIRFTELASAQEQKWL 178
Query: 165 IMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD------- 217
I I+LK + LGI E+ +F HP A+D++ DL+ +C L D +
Sbjct: 179 IRILLKSMGLGIGEQRLFGLLHPMAKDMYQRCSDLERICNLLADDKLTLETTPGNATTSS 238
Query: 218 ---------------IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVV-IECKFDGDRIQIH 261
IE + +RP L R L +V+ +E K DG+R Q+H
Sbjct: 239 SSSANISAVINLNTFIEPFQQIRPMLCERFP---GKIEDLMQSDVLYMERKMDGERFQLH 295
Query: 262 KNGSEIHYFSR-------SFLDHSEYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRF 313
+ Y SR SF D E+G ++ L ++ ILDGEM++WDT R+
Sbjct: 296 YARNRFKYISRNGADYTKSFGDSYEHGTLTPQLRTLLPLGMESIILDGEMMIWDTQQLRY 355
Query: 314 AEFGSNQEIAKAARDGLSSDRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSK 371
E G N ++ L DR C+ +D+LY+ S++ + +R L +++ +
Sbjct: 356 REKGENTDVKH-----LKPDRSWRPCFVVYDLLYLNGGSLLDMTYVQRAHKLHELITEQQ 410
Query: 372 GRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEP 431
G L+ + + E SL N F++ +++ EGIVLK S ++P
Sbjct: 411 GVLQLM------------KAEKIASLEHFNT-----LFQQMLDSNAEGIVLKKQNSVYKP 453
Query: 432 GDR-SGKWLKLKPEYIRAG-SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRR 489
G R G W K K +YI ++ DVLIIGG+Y R+ + FLV + +P DT
Sbjct: 454 GVRVGGGWYKDKADYIEGLITEFDVLIIGGFYN--RKRTFIESFLVGVL-KPGGDTERDE 510
Query: 490 FISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKE-RPDVWIESPE 548
S V + + + +L P++R PP +Y N K+ PDVWI+ P+
Sbjct: 511 VYSIGCVAN--NTRQRSVLHHELSPHWRNAS--TDPPPLWYHYKPNEKDGSPDVWIQ-PD 565
Query: 549 KSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 608
KSI+L + + T F+ P SL FPR +R DK W++C+ +Q + EL G +
Sbjct: 566 KSIVLQVKAADLTPNGAYFT-PKSLHFPRTQLMRDDKVWNECMTLQEYTELCQGRGGIKK 624
Query: 609 KGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
K L D ++ R ++N + ++ + DV ++ + +F FCIL
Sbjct: 625 LNKRQASLNDFTTERKRQKITPAERNRLGLAAYEKRYDVEPLEHSSQLFDGFSFCIL 681
>gi|328781746|ref|XP_001122279.2| PREDICTED: DNA ligase 4 [Apis mellifera]
Length = 873
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 157/480 (32%), Positives = 247/480 (51%), Gaps = 43/480 (8%)
Query: 43 VDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNA 102
+ +F L+LILP L+R +Y LK+ LA+ I + K+S DA L ++ A A
Sbjct: 57 ISFFPILKLILPDLERRHEAYNLKQKSLADLYIRVFCLGKNSKDAKNLKQYKAPIAKKIA 116
Query: 103 G------NFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE--KISVLSTLIK 154
G +F A +L+ R + + LT++++N L+ + S +N+A+ K + L++
Sbjct: 117 GREKPKNDFAEKACYILRNRLPVENSDLTLEQINLFLNNI-SLKNKADRPKDEIFKFLLE 175
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHK 214
KTNA E KWI IILK+LKLGI+ K I FHPDA LF+V+ +L+ VCEKL D R+
Sbjct: 176 KTNALEFKWITRIILKNLKLGITSKKILQVFHPDANSLFDVSSNLQHVCEKLYDPQLRY- 234
Query: 215 RQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF 274
DI+V +P L R + ++ ++CK+DG+R Q+H + YF+R
Sbjct: 235 HCDIQVFSHFKPMLLERCQIENIKKLFNEKEQYFVQCKYDGERSQMHMKDGKYKYFTRQG 294
Query: 275 LD---HSEYGHA-----MSKIIEQ--NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAK 324
D +S +G MS + ++ N V ILDGE++ W G N ++ K
Sbjct: 295 YDITNYSGFGETSSSGFMSSVFDRLLNQEVKSVILDGELMGWHKEKKLLGSKGMNYDVKK 354
Query: 325 AARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLN 384
+ + S Q C+ AFD++ D + ++ ++R E+L+ + K +G L
Sbjct: 355 LSEN---SHYQPCFVAFDIIMYNDILINNEPYEKRLEILKNIFKEEEGCLLL-------- 403
Query: 385 SHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKP 443
C S +E+ F E+I+N++EGIV+K SK++P R G K+K
Sbjct: 404 ---------CKSNKISKSEELCNIFNESIKNKEEGIVVKKCDSKYKPNIRDGTGCYKIKA 454
Query: 444 EYIR-AGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPD-TYPRRFISFCRVGTGLS 501
EY D+D++I+GGYYG G+ G + FL+ +A P P +F+S V GLS
Sbjct: 455 EYSEDLIQDIDLIILGGYYGDGKFIGLIRSFLMGVASSPKTSGENPTKFLSVVSVSNGLS 514
>gi|312383474|gb|EFR28549.1| hypothetical protein AND_03403 [Anopheles darlingi]
Length = 1027
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 196/643 (30%), Positives = 300/643 (46%), Gaps = 83/643 (12%)
Query: 1 MTKTEETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTY-CD-----SVDYFSALRLILP 54
M E+ + L + + + A K+ +R F TY C S + LRL++P
Sbjct: 1 MAARNESTLTAFSELVAVLTRAETAKNKQEVWRNFFTTYECSKRNVPSATIYPTLRLLVP 60
Query: 55 SLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQ 114
+D ER SYGL+ +L + I ALG++ S D VR + +AP V E L
Sbjct: 61 GMDSERKSYGLRHKLLTDGYIRALGLNSRS-DEVRQL------SAPETKGDLGVRLERLV 113
Query: 115 RRQGMISGGLTIKELNDLLDRL--ASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDL 172
R + LTI + N LLD L A + R VL+ L++ + + +W++ IILKDL
Sbjct: 114 RGRCPDRSSLTIADANRLLDELGLAGTGQRRRVEQVLAELLECGSPADHRWLVRIILKDL 173
Query: 173 KLGISEKSIFHEFHPDAEDLFNVTCDLK-LVCEKLKDRNQRHKRQDIEVG-----KAVRP 226
+LGIS++SI +HP A L++ T DL+ LV E R + I G VRP
Sbjct: 174 RLGISQRSILQLYHPYAPQLYDTTGDLRQLVQEIESGRVTKASGPPIPGGYIRLMHHVRP 233
Query: 227 QLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSK 286
L RI D A L E K DG+R Q+HK+G Y SR+ +D+SE A +
Sbjct: 234 MLCQRI-DLRAVGALLQQGTYWAETKMDGERFQLHKSGPHYRYLSRNGIDYSERFGATAD 292
Query: 287 IIEQNVL----------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL 336
++ + ++ ILDGEM+V+D R+ + N ++ KA R G ++D +
Sbjct: 293 QLDGTLTPLVAELFAPSLESVILDGEMMVYDRRELRYRDKCENTDV-KALRTG-ATDLRP 350
Query: 337 CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVP-----DHGLNSHVRPQG 391
C+ +DVLY GR T VP VR Q
Sbjct: 351 CFCVYDVLY------------------------HNGRPLTGVPYAERLRLLTTLLVREQ- 385
Query: 392 EP-----CWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDR-SGKWLKLKPEY 445
P C + + + I+ EG+VLK + ++P R G W KLKP+Y
Sbjct: 386 -PGFIVYCQREQVRDAAHLVQLLNTAIDGEQEGLVLKREDAIYQPNRRHGGGWYKLKPDY 444
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ D D+LI+GGYY RR V FLV + + + D +++ +V GL E+
Sbjct: 445 VDGLVVDFDLLILGGYY--NRRRTFVNTFLVGVRDDSSSD-----YLTLAKVSMGLQAEQ 497
Query: 505 LDAVVTKLKPYFRKYEYPKR--APPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTI 562
+ L P++++ + A PS Q + PDVW+E P++SI+L + +
Sbjct: 498 WAELNRTLAPHWQEVVAGQSNGADPSSPQYPRWGQTVPDVWLE-PKESIVLQLRGS-ELV 555
Query: 563 RSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNG 605
RSE ++A ++LRFPRI +R D+ ++D ++ + LV G
Sbjct: 556 RSESYAAGHTLRFPRILAIRTDRRYNDVCTIEELLALVAVGPG 598
>gi|195393254|ref|XP_002055269.1| GJ19276 [Drosophila virilis]
gi|194149779|gb|EDW65470.1| GJ19276 [Drosophila virilis]
Length = 992
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 194/708 (27%), Positives = 318/708 (44%), Gaps = 93/708 (13%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCD-------------------SVDYFSALRLI 52
+ ++ ++ K +K +++ D++C + ++ LRL+
Sbjct: 12 ICTMMERVKVAKNMQRKELILKRYYDSFCKHRETFRLSAGLTANQLEDGASSFYPVLRLL 71
Query: 53 LPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEV 112
+P D R +YGL+ + L L ++KDS DA+RL + ++ V V
Sbjct: 72 IPGADTSRDNYGLQITALGRLYTRVLQLAKDSDDAIRL----QHRTVSTFRDYADVVHAV 127
Query: 113 LQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDL 172
L R LT+K+++++LD +AS E+ K L + +AQE KW+I I+LK +
Sbjct: 128 LLPRCHNEPSNLTLKQIHEMLDIIAS-EDTTVKERELIRFTELASAQEQKWLIRILLKSM 186
Query: 173 KLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDR--------------------NQR 212
LGI E+ IF HP A+D++ DL +C L D N
Sbjct: 187 GLGIGEQRIFGLLHPLAKDVYQRCSDLARICVLLADNKLLPEAPTGNIGSSSSSGGSNAV 246
Query: 213 HKRQD-IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVV-IECKFDGDRIQIHKNGSEIHYF 270
K IE +RP L R +L +V+ +E K DG+R Q+H Y
Sbjct: 247 TKLNTFIEPFHQIRPMLCERFP---GKIEELMKSDVLYLETKMDGERFQLHYARGRFKYI 303
Query: 271 SR-------SFLDHSEYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEI 322
SR SF D E G + L ++ ILDGEM++WDT R+ E G N ++
Sbjct: 304 SRKGADYTKSFGDSYETGTLTPHLRPLLPLGMESIILDGEMMIWDTQQLRYREKGENTDV 363
Query: 323 AKAARDGLSSDRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPD 380
L +R C+ +D+LY+ S++ + +R LQ+++ +G L+ +
Sbjct: 364 KH-----LKPERSWRPCFVVYDLLYLNGESLLDMTYAQRTYKLQELISEQQGVLQIM--- 415
Query: 381 HGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDR-SGKWL 439
+G+ SL N F++ +++ EGIVLK S ++PG R G W
Sbjct: 416 ---------KGQKISSLEHFNT-----LFQQMLDSNAEGIVLKKQNSIYKPGVRVGGGWY 461
Query: 440 KLKPEYIRAG-SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K K +YI ++ DVLIIGG+Y R+ + FL+ + +P +T S V
Sbjct: 462 KDKADYIEGLITEFDVLIIGGFY--NRKRTFIESFLLGVL-KPGGETERDEVYSIGCVAN 518
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKE-RPDVWIESPEKSIILSITS 557
+ + + +L+P++ ++ PP +Y N KE PDVWI+ PEKS+IL + +
Sbjct: 519 --NTRQRTVLHHELRPHW--HDASTEPPPLWYHYKPNEKEGSPDVWIQ-PEKSVILQVKA 573
Query: 558 DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQ 617
T F P SL FPR +R DK W++C+ +Q + EL + K L
Sbjct: 574 ADLTPNG-AFYTPKSLHFPRTQLLRDDKVWNECMTLQEYTELCQGQGAIKKLNKRQANLN 632
Query: 618 DDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
D ++ R ++N + ++ + DV + + +F FCIL
Sbjct: 633 DFTTERKRIKLTTAERNRLGLAAYEKRYDVQPLANSSQLFEGFSFCIL 680
>gi|358383754|gb|EHK21416.1| hypothetical protein TRIVIDRAFT_180472 [Trichoderma virens Gv29-8]
Length = 851
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 172/567 (30%), Positives = 284/567 (50%), Gaps = 70/567 (12%)
Query: 78 LGMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMISGG-LTIKELNDLL 133
+ + K+S D L++W+ G A AG+F EV+ +R + G +TI E+N L
Sbjct: 1 MKIDKNSEDGYNLLHWKLPGQTTGARLAGDFAGRCFEVISKRPMRVQAGDMTIAEVNHQL 60
Query: 134 DRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLF 193
D+LA+S AE + + T + NA+E+ W+I IILK +K+G +EK+ + +HPD E LF
Sbjct: 61 DKLAASSGEAENLRIFETFYNRMNAEELMWLIRIILKQMKVGATEKTFLYLWHPDGETLF 120
Query: 194 NVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAWRKL--------H 243
+V+ LK VC +L D R ++ + I + + ++PQLA A+++K+
Sbjct: 121 SVSSSLKRVCWELYDPEFRLEQDEAGIALMQCLQPQLAQ--FQMPASFQKMIELLRPTED 178
Query: 244 GKEVVIECKFDGDRIQI-------HKNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVLVD 295
E IE K DG+R+Q+ H G ++SR D++ YG+ + +++N +
Sbjct: 179 DAEFWIEEKLDGERMQMHMMEDPSHPGGRRFCFWSRKAKDYTYLYGNGL---LDENSSLT 235
Query: 296 R------------CILDGEMLVWDTSLNRFAEFGSNQEIAKAAR----DGLSSDRQLCYF 339
R ILDGEM+ WD +++ FG+ + A A + D ++ + +
Sbjct: 236 RHLKNAFAPGVRNLILDGEMITWDMGVDKIVPFGTLKTAAIAEQNNKSDSNTAGHRPLFR 295
Query: 340 AFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVA 399
FD+LY+ D + +L++R L K VK RLE ++ + + A
Sbjct: 296 VFDILYLNDKQLTQYTLRDRRNALDKAVKSVYRRLE-------VHEYTK----------A 338
Query: 400 HNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIG 458
+ D +E ++ + N EG+VLK+ S + R+ WLK+KPEY+ G LD +IIG
Sbjct: 339 TSADAIEPLLRDVVANASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCVIIG 398
Query: 459 GYYGSGRRGGEVAQFLVAL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
GYYGSG+RGG ++ FL L P + SF +VG G E+ + +
Sbjct: 399 GYYGSGKRGGMLSSFLCGLRVTQNHIQAGANPEKCFSFFKVGGGFRTEDYAEIRHRTDGK 458
Query: 516 FRKYEYPKRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYS 572
+ +++ PK P + ++ ERPD+WI K ++ S+ F+ ++
Sbjct: 459 WMEWD-PKNPPSEYIELGGGEAKQFERPDMWIRP--KDSVVVSVKAASVGPSDQFARGFT 515
Query: 573 LRFPRIDRVRYDKPWHDCLDVQSFVEL 599
LRFPR R+R D+ W L ++ F EL
Sbjct: 516 LRFPRFRRLRLDRSWDTALSLEEFQEL 542
>gi|91089797|ref|XP_968624.1| PREDICTED: similar to ligase IV, DNA, ATP-dependent, partial
[Tribolium castaneum]
Length = 716
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 255/511 (49%), Gaps = 58/511 (11%)
Query: 148 VLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLK 207
VL L+K + + +KW+I+IILKDLKLG + SI + FHPD D F +L+ C+ ++
Sbjct: 8 VLQFLLK-LSPRNIKWLILIILKDLKLGFGDNSILNCFHPDGADFFATNSNLRNFCDLIR 66
Query: 208 DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEI 267
D R +I V +A RP L+ R A+ K +IE KFDG+R Q+H +
Sbjct: 67 DPQVRLNELEINVFQAFRPMLSKRCDAANFKKCFPESKTFIIENKFDGERFQLHMADGQF 126
Query: 268 HYFSRSFLDHSE-YGHAMSKIIEQNVL-------VDRCILDGEMLVWDTSLNRFAEFGSN 319
YFSR+ D+++ YG + + I L R ILDGEM++W+ F G N
Sbjct: 127 RYFSRNGFDYTDTYGASFTAGIFTPKLRPVLGPETKRVILDGEMMLWNRETRSFGSKGMN 186
Query: 320 QEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVK-PSKGRLETLV 378
++ K G Q C+ FD+L D + +Q L +R + L+ VVK P +G T+V
Sbjct: 187 LDVKKLGEGG---KYQPCFCVFDILLHNDRVLTNQPLFKRLKCLKSVVKNPVEG---TIV 240
Query: 379 PDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKW 438
V E A ++ ++ +++N +EGIV+KD S ++ DR+ W
Sbjct: 241 --------VSQYSE------ASSLGDIVDALNSSVDNNEEGIVVKDTKSVYKCSDRNSGW 286
Query: 439 LKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVG 497
K+K EY DLDV+++GG Y SG+ + F V ++ +TY +SF R+
Sbjct: 287 FKVKMEYFDDVVHDLDVILMGGCYSSGK----LNSFFVGVSS--GANTY----LSFGRIS 336
Query: 498 TGLSDEELDAVVTKLKPY---FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS 554
+GLSDE+LD + K + F+ + F ++RPD++IE P S IL
Sbjct: 337 SGLSDEQLDLLAEKFQSKGVDFKSFSTESEGKLQF------GRDRPDLYIE-PHNSCILQ 389
Query: 555 I--TSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKE 612
I T IRT V PY+LRFPR+ ++R DKP +C + +EL + + K
Sbjct: 390 IRATELIRTTNDTV-KCPYTLRFPRVLKIRDDKPVDECFSINELLELAGQNKPVIKLNKR 448
Query: 613 YGGLQDDKPKQFRSSRKGEKKNVSIVPSHFL 643
+ L + K +R +K + ++ S L
Sbjct: 449 HIELSEISAK----ARPAKKIKLEVIKSDLL 475
>gi|240275395|gb|EER38909.1| DNA ligase [Ajellomyces capsulatus H143]
Length = 940
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 172/609 (28%), Positives = 302/609 (49%), Gaps = 70/609 (11%)
Query: 24 PAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMS 81
P ++R ++F+ + V D F A RLI+P DR+R YGLKE + L+ + +
Sbjct: 80 PQERRRDIIQRFISRWRKEVGDDIFPAFRLIIPEKDRDRAMYGLKEKAIGKLLVKLVELE 139
Query: 82 KDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSEN 141
+ A A+R + W ++ V + Q +N+ LD+L+++
Sbjct: 140 RCQARALR-VEW-----------LAILLVAVSKSYQRAFE-----DRVNEQLDKLSAASK 182
Query: 142 RAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKL 201
E++ +L+ ++ N +E+ W+I IIL+ +K+G +E++ F +HPDAE LF+++ L+
Sbjct: 183 EDEQVPILAYFYRRMNPEELMWLIRIILRQMKVGATERTFFSIWHPDAEALFSISSSLRR 242
Query: 202 VCEKLKDRNQRHKRQDIEVG--KAVRPQLA-MRIGDAHAAWRKLHGKE----VVIECKFD 254
VC +L + + R + + +V + +PQLA ++ +++ E IE K D
Sbjct: 243 VCWQLYNPDVRLEGDETKVTLMQCFQPQLAQFQMQSFEHMIKRMRLAEDDPTFWIEEKLD 302
Query: 255 GDRIQIH-------KNGSEIHYFSRSFLDHSE-YGH-------AMSKIIEQNVL--VDRC 297
G+RIQ+H G ++SR +++ YG+ A+++ ++ V
Sbjct: 303 GERIQLHMKPDDSIPGGKRFGFWSRKAKEYTYLYGNGLLDENGALTRHLQDAFADGVQSI 362
Query: 298 ILDGEMLVWDTSLNRFAEFGSNQEIAKA-ARDGLSSDRQLCYFAFDVLYVGDTSVIHQSL 356
ILDGEM+ WD + FG+ + A A R+ S+ ++ + FD+LY+ + +L
Sbjct: 363 ILDGEMITWDPEHDAIVPFGTLKTAALAEQRNPFSTGQRPLFRIFDILYLNGRPLTRYTL 422
Query: 357 KERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENR 416
K+R + L+ V P R E D + H+ +++ ++ +
Sbjct: 423 KDRRKALEASVIPVHRRFEIHTYD-----------------IGHSAADIDPLLRKVVAEA 465
Query: 417 DEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLV 475
EG+VLK+ S + +R W+K+KPEY+ G LD ++IGGYYGSGRRGG ++ FL
Sbjct: 466 SEGLVLKNPNSPYRLNERHDDWMKVKPEYMTEFGESLDCIVIGGYYGSGRRGGALSSFLC 525
Query: 476 AL---AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV 532
L +P + SFC+VG G + + + + ++ PKR P + ++
Sbjct: 526 GLRVDGSHSKTGDHPTKCYSFCKVGGGFTAADYANIRHHTDGKWMDWD-PKRPPTEYIEL 584
Query: 533 TNN--SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDC 590
ERPDVWI+ PE S++L + + ++ F ++RFPR R+R DK W
Sbjct: 585 AGGDLQYERPDVWIK-PEDSVVLCVKAS-SVSSTDQFRLGLTVRFPRFKRLRMDKDWRSA 642
Query: 591 LDVQSFVEL 599
L +Q F++L
Sbjct: 643 LSIQEFMDL 651
>gi|303287939|ref|XP_003063258.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455090|gb|EEH52394.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1197
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 198/396 (50%), Gaps = 73/396 (18%)
Query: 332 SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKP---------------------- 369
+D +L Y AFDVLY D SVIH+ L ERH++L+ + KP
Sbjct: 436 ADLELVYVAFDVLYDDDHSVIHRPLSERHDVLRGMFKPLGAGHDAGAHARARERARGEET 495
Query: 370 ------------------------SKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
SKGR++ VP V P +VA + E+
Sbjct: 496 DDDDDAPVADQSDGTVRLGPRGGASKGRVQIHVPAKDPTEPVNPD-----CVVASMLGEI 550
Query: 406 EKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGR 465
E +F ++ DEG+++KDLGSKWEPG R WLK+KP+Y+ DLDV+IIGG+YG+GR
Sbjct: 551 ETYFWRAVDRGDEGLIIKDLGSKWEPGARGDSWLKIKPDYLPT-EDLDVVIIGGFYGTGR 609
Query: 466 -RGGEVAQFLVALAERPAPD-TYPRRFISFCRVGTGLSDEELDAVVTKLKPYF----RKY 519
RGG++A++L+ + E P + P R +SF +VGTG+S + + + KL P+ + Y
Sbjct: 610 QRGGKIAEYLLGIVETPTREGARPTRVMSFSKVGTGMSVDVMQRLREKLGPHMLPAGKGY 669
Query: 520 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 579
PP+ Y VT + E PDVWI+ PE S++L++ +DIR +R+ F A SLRFPR+
Sbjct: 670 N-----PPTMYDVTGAAAETPDVWIDRPENSVVLTVKADIRLVRTMTFRADVSLRFPRVT 724
Query: 580 RVRYDKPWHDCLDVQSFVEL---------VHSSNGTTQKGKEYGGLQDDKPKQFRSSR-K 629
VR+DKPWHD L + + V + + GG KQ S R K
Sbjct: 725 GVRWDKPWHDALSNEQLAVMQDEGGIGVAVGRAGRFGNRTAAEGGDGAGYAKQPSSKRHK 784
Query: 630 GEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+P+H D S + E +I + IL
Sbjct: 785 AAPARDRRLPAHLAVADTSAVTREGNILRSLDVRIL 820
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/325 (35%), Positives = 182/325 (56%), Gaps = 23/325 (7%)
Query: 12 LVSLFNWIQKTKPAAKKRSKF-RKFLDTYCDSVDY---------FSALRLILPSLDRERG 61
L +L + I+ + +K +K R+ LD + + F RL+LP +D+ER
Sbjct: 35 LCALLDAIRNVNRSGRKGAKRKREILDGFHAEMGMRRDAPREGAFDMYRLVLPQMDKERA 94
Query: 62 SYGLKESVLANCLIDALGMSKD-SADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQ--G 118
+YGLKE+ LA CL ALG+ + S D + L WRK G G F + A +V +
Sbjct: 95 AYGLKEAALARCLGLALGLKRGVSPDFIALEAWRKQGT----GVFALTAFQVCHKHMPDN 150
Query: 119 MISGG--LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGI 176
+ + G T+ E+ND LD+LA + EK+ +L L++ A +M+W++ IILKDLKLG
Sbjct: 151 IPASGRRATVGEVNDALDKLAGKKATDEKVPILRALLEGLGAVQMRWLVAIILKDLKLGC 210
Query: 177 SEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAH 236
E + +HPDAEDL+NV CDL+ V L R++ +RQD+ G V + R+
Sbjct: 211 GESFLLRHYHPDAEDLYNVCCDLRRVVTTLNVRDKPFERQDLSPGSLVNAMNSSRVNATE 270
Query: 237 AAWRKLHGKEV--VIECKFDGDRIQIHKNGS-EIHYFSRSFLDHSEYGHA-MSKIIEQNV 292
A++K+ ++ VIE KFDG+RIQ+H+ G E Y +R+ +D G++ + ++ +
Sbjct: 271 KAFKKMQKRKATFVIETKFDGERIQVHRTGEREFKYLTRNNIDFHPRGYSVLDRLFRARL 330
Query: 293 LVDRCILDGEMLVWDTSLNRFAEFG 317
C+LDGE+++W+ R+ EFG
Sbjct: 331 KKTTCVLDGELVIWNKREKRYLEFG 355
>gi|194769798|ref|XP_001966988.1| GF21760 [Drosophila ananassae]
gi|190622783|gb|EDV38307.1| GF21760 [Drosophila ananassae]
Length = 924
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 191/714 (26%), Positives = 327/714 (45%), Gaps = 104/714 (14%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVD-------------------YFSALRLI 52
+ LF ++ TK K + + +++C D ++ LRL+
Sbjct: 14 ICDLFEKLKATKKVVNKEDVLKSYYESFCRHRDSFRRETGLTDEQEETGESSFYPILRLL 73
Query: 53 LPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEV 112
LPS D +R +YGL+ + L I L ++ DS DA+ ++ R G + G+ V V
Sbjct: 74 LPSADTKRDNYGLQITALGRLYIRVLQLATDSRDAI-MLQHRSGNMYRDYGD---VVYAV 129
Query: 113 LQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDL 172
L+ R L + ++ +LD +A+ + + ++ ++ +K + +E KW+I ++LK L
Sbjct: 130 LKPRCFNPPSDLRLSHIHQMLDTIANEDTKVKEQELIR-FTEKASPEEQKWLIRLLLKSL 188
Query: 173 KLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKL-----------KDRNQRHKRQDIEVG 221
LGI E+ IF HP A++++ DL VC L + K+ D+
Sbjct: 189 GLGIGEQRIFGILHPKAQEIYLRCSDLGHVCNLLAVKSPSLETSGSSTSAADKKPDVATL 248
Query: 222 K---------AVRPQLAMRI-GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFS 271
+RP L R GD + + +E K DG+R Q+H + Y S
Sbjct: 249 NLNAVIRPFHQIRPMLCERFPGDVQEL---MQSDVLYMETKMDGERFQLHIDNGRFMYIS 305
Query: 272 RSFLDHS-------EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIA 323
R+ +D++ + G K+ L + ILDGEM+VWDT R+ E G N ++
Sbjct: 306 RNGVDYTRNFGASYDTGTLTPKLRGLLPLSLQSIILDGEMMVWDTIQKRYREKGENTDVK 365
Query: 324 KAARDGLSSDR--QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
L +R Q C+ +D+L+ S++ + +R LQK++ +G L+
Sbjct: 366 -----NLKPERSWQPCFVIYDLLFFNGKSMLDHTYIQRSYRLQKMIGEQEGVLQL----- 415
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKF---FKETIENRDEGIVLKDLGSKWEPGDR-SGK 437
+ A + VE+F F++ ++N+ EGIVLK S ++PG R G
Sbjct: 416 ---------------MRAQKITSVEQFNELFQQALDNKAEGIVLKKQNSTYQPGVRIGGG 460
Query: 438 WLKLKPEYIRAG-SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRV 496
W K K +YI+ ++ DVLIIG +Y R+ V FL+ + + PAP R F +
Sbjct: 461 WFKDKADYIKGLITEFDVLIIGAFY--NRKRTFVESFLLGVLQ-PAPAGSSHRHEVFS-I 516
Query: 497 GTGLSDEELDAVVT-KLKPYFRKYEYPKRAPPSFYQVTNNSKER-PDVWIESPEKSIILS 554
G ++ + V+ LKP++ ++ K PP +Y + PD+WIE P+ SIIL
Sbjct: 517 GCVTNNTQQRGVLNHTLKPHW--HDVAKEPPPLWYHYKATDRAGCPDLWIE-PQNSIILQ 573
Query: 555 I-TSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEY 613
+ +D+ + F SL FPR + R DK W +C+ +Q F E+ + K
Sbjct: 574 VKAADLAP--NGAFYTRKSLHFPRTEMKRDDKSWSECMTLQEFNEICEGPAAIKKLNKRQ 631
Query: 614 GGLQD--DKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
L+D K K R++ E++ + + + + + + + +F + FCIL
Sbjct: 632 LRLEDVTTKRKHHRTT-PAERRRLGLA-VYEKRCRLDPEQSTSRLFEGLSFCIL 683
>gi|195448859|ref|XP_002071845.1| GK10206 [Drosophila willistoni]
gi|194167930|gb|EDW82831.1| GK10206 [Drosophila willistoni]
Length = 935
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 188/664 (28%), Positives = 304/664 (45%), Gaps = 77/664 (11%)
Query: 42 SVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLIN--WRKGGAA 99
S ++S LRL+LPS D R +YGL+ + L L ++KDS DA+RL + W
Sbjct: 69 SSSFYSVLRLLLPSADTARDNYGLQITALGRLYTRVLQLAKDSRDAIRLQDRGWNSFRMG 128
Query: 100 PNAG-NFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNA 158
G ++ V VL R LT++E++++LD +A+ E+ K + L +
Sbjct: 129 ARGGEDYAEVVHAVLLPRCHNPPSNLTLQEVHNMLDTIAN-EDMTVKETELIRFTDLASP 187
Query: 159 QEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRN-------- 210
E KW+I I+LK L+LGI E+ IF H +A+D++ DL VC L D
Sbjct: 188 LEQKWLIRILLKRLELGIGEQRIFGVLHANAKDMYQRCSDLGRVCNLLADNKLNVGNDSA 247
Query: 211 -----------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVV-IECKFDGDRI 258
Q + IE +RP L R +L +V+ +E K DG+R
Sbjct: 248 ATTTTPAAAPPQFNLNLVIEPFHHIRPMLCERFP---GKIEELMSLDVLYMETKMDGERF 304
Query: 259 QIHKNGSEIHYFSRSFLDHS-----EYGHAMSKIIEQ-----NVLVDRCILDGEMLVWDT 308
Q+H Y SR+ D++ Y A + + ++ ILDGEM+VWD
Sbjct: 305 QLHFARDRFKYISRNGADYTRNFGGSYDQADGTLTPHLRALLPLGMESIILDGEMMVWDV 364
Query: 309 SLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVK 368
+ + + G N ++ DG + CY +D+LY+ S++ +R L +++
Sbjct: 365 NRQCYRDKGENTDVKHLKLDG---SWRPCYVVYDLLYLNGQSLLDLPFVQRMHKLNELIV 421
Query: 369 PSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK 428
G L + H R G ++++ ++F+E +++ EGIVLK S
Sbjct: 422 ERPGVLGIM--------HGRKVG---------SIEQFHQYFQEALDSNAEGIVLKMQNST 464
Query: 429 WEPGDR-SGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTY 486
++PG R G W K K +YI+ ++ DVLIIGG+Y R+ + FL+ + + ++
Sbjct: 465 YKPGVRVGGGWYKDKADYIKGLTTEFDVLIIGGFY--NRKMTFIESFLLGVLQTQTNNSG 522
Query: 487 PRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKER-PDVWIE 545
S RV + + + L+ ++ K PP ++ N KE PDVWIE
Sbjct: 523 RDEVFSIGRVAN--NTRQRVVLNDALRSHWHKAS--AEPPPLWFHYKANEKEGCPDVWIE 578
Query: 546 SPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNG 605
P SIIL + + ++A SL FPR + VR DK W++C+ +Q F +L G
Sbjct: 579 -PRHSIILQVKAADLAPYGAFYTAK-SLHFPRTELVRDDKVWNECMTLQEFQQLCEGQIG 636
Query: 606 TTQKGKEYGGLQDDKPKQFRSSRKGEK----KNVSIVPSHFLQTDVSDIKGETSIFSDMV 661
+ K L D F + RK +K + + S + + ++ T +F +
Sbjct: 637 IKKLNKRQLRLDD-----FTTERKRQKLTPAERSRLGLSAYEKRRCVPLEANTLLFDEFK 691
Query: 662 FCIL 665
FCIL
Sbjct: 692 FCIL 695
>gi|256079975|ref|XP_002576259.1| DNA ligase IV [Schistosoma mansoni]
gi|353230062|emb|CCD76233.1| putative DNA ligase IV [Schistosoma mansoni]
Length = 848
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 182/630 (28%), Positives = 303/630 (48%), Gaps = 89/630 (14%)
Query: 53 LPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNA----GNFPMV 108
+PS DR R ++GL+ L+ +I A+G++ +S A +L PN+ +F V
Sbjct: 75 IPSHDRSRKAFGLRGQTLSRLIIKAIGLAPNSLAARKL-----SHIHPNSIHRQTDFADV 129
Query: 109 AAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMII 168
A VL+ R S L++K+LN LD L+++E+ ++ VL +L++ T A E KWII +I
Sbjct: 130 AYTVLRARCREDSV-LSVKDLNTHLDELSTAESYDMRLQVLRSLLQLTTALEQKWIIRLI 188
Query: 169 LK-DLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKD------------RNQRHKR 215
+K D G+S KSI FHP A +F VT DL +CE++ + N K
Sbjct: 189 VKRDSGCGLSGKSILRCFHPAAVSVFEVTQDLLPLCERIANIPSPNTFMLTGYANNLSKS 248
Query: 216 QDIEVGKAVRPQLAMRIGDAHA---AWRKLHGKE---------VVIECKFDGDRIQIHKN 263
D+ + RP L R + L+GK+ ++ E KFDG+R+Q+HK+
Sbjct: 249 FDVTLFVPFRPMLCERANSGDMLVNSALHLYGKQNQGDTKGLKLLFETKFDGERVQLHKS 308
Query: 264 GSEIHYFSRSFLD-HSEYGHAMSKIIEQNVL---------VDRCILDGEMLVWDTSLNRF 313
+ Y+SR+ L+ + YG ++ ++ V CILDGEM+++ N
Sbjct: 309 SNSYRYWSRNGLEWTASYGEDGTRDFDRLSAQLHCGFAQHVTDCILDGEMMIFSKWSNSI 368
Query: 314 AEFGSNQEIAKAARDGLSSDR-QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKG 372
+ ++ +++ D Q C+ FD+LY+ +V
Sbjct: 369 MSKSTKFDVKRSSYQNPEIDNYQPCFIVFDILYLN----------------SQVCLSYPY 412
Query: 373 RLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWE 430
+ P +N + W + + EV + F ++N EG+++K + S +
Sbjct: 413 HINDFKPIPIINGIMYVSK---WYTASAHQTEVARAFNHLVDNHQEGLIVKIANSPSLYL 469
Query: 431 PGDRS-GKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGE----VAQFLVAL-----AE 479
PG R+ G W K+KP+YI+ DLD LI+GGY+ RG + V FL A+ E
Sbjct: 470 PGIRTDGGWWKIKPDYIQGLLEDLDCLIVGGYF--HHRGDKIITRVNHFLCAVRNDESYE 527
Query: 480 RPAPDTYP-RRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKE 538
+ D + RF +FC+V +GL+ ++L + L +++ Y+ S + NS E
Sbjct: 528 STSEDNFTLTRFYTFCKVKSGLTVKQLKEINQLLGKHWKVYDKKHPNSSSTEWLCVNS-E 586
Query: 539 RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVE 598
RPDVWI +P S++L + I+S+ +S +LRFPR+ +R+DK W D L + ++
Sbjct: 587 RPDVWI-APRSSLVLQL-HGAELIQSDSYSCGITLRFPRVVAIRHDKNWRDSLSMSELIK 644
Query: 599 LVHSSNGTTQKGK-----EYGGLQDDKPKQ 623
L + G + + GL D + +Q
Sbjct: 645 LNTETEGKLATKRLSIVPTFSGLADVEHQQ 674
>gi|374351670|gb|AEZ36036.1| DNA ligase 4, partial [Nicotiana benthamiana]
Length = 146
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 110/145 (75%), Positives = 119/145 (82%), Gaps = 3/145 (2%)
Query: 34 KFLDTYC-DSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLIN 92
KFLD +C D F+A+RLILP LDRERGSYGLKE VLA CLIDAL MS+DS DA RL+N
Sbjct: 1 KFLDAFCRKPQDNFAAMRLILPGLDRERGSYGLKEHVLATCLIDALAMSRDSDDARRLLN 60
Query: 93 WRKGG--AAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLS 150
WRKGG NAGNF +VAAEVLQRRQGM S GLTIKELN+ LD LAS ENRAEK S+LS
Sbjct: 61 WRKGGPKTGSNAGNFSLVAAEVLQRRQGMASAGLTIKELNEFLDHLASGENRAEKTSILS 120
Query: 151 TLIKKTNAQEMKWIIMIILKDLKLG 175
LI+KTNAQEMKWIIMIILKDLK G
Sbjct: 121 DLIRKTNAQEMKWIIMIILKDLKFG 145
>gi|403182469|gb|EJY57407.1| AAEL017561-PA, partial [Aedes aegypti]
Length = 798
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 184/678 (27%), Positives = 308/678 (45%), Gaps = 93/678 (13%)
Query: 33 RKFLDTYCDSV------DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSAD 86
R++ Y DS F LRL+LP+ DRER SYG++ L + I LG+S+ S +
Sbjct: 47 REYRQKYGDSTVSVGVTSIFPILRLLLPAADRERDSYGIRVKTLRDLYIKILGISETSIE 106
Query: 87 AVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMI--SGGLTIKELNDLLDRLAS---SEN 141
A RK ++G+F A + +G +T+ ++N LD + +
Sbjct: 107 A------RKLSGNGSSGDF---ADRIFTLMRGRCPEECHMTVWDVNQHLDAMGQHYQNGR 157
Query: 142 RAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKL 201
R++ L +++ + KW+I IILK+L+LG+S+ + +HP A LF+ L
Sbjct: 158 RSKTQDELIQMVQGMTQLDQKWLIRIILKNLRLGMSQTKLLGLYHPKAGALFDRFSHLSK 217
Query: 202 VCEKLKDRNQRHKRQDIEVGKAVR------PQLAMRIGDAHAAWRKLHGKEVVIECKFDG 255
VCE ++ + + VG AVR P L R+ D L E +E K DG
Sbjct: 218 VCEAVESGEGLEEVGEPGVGMAVRLFNPVKPMLCQRV-DLKLVDGMLKKDEFWLETKMDG 276
Query: 256 DRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQ----------NVL---VDRCILDGE 302
+R QIHK G YFSR + EY H + Q N+L V ILDGE
Sbjct: 277 ERFQIHKEGQIYKYFSR---NSYEYSHVFGENANQPGATLTPYLSNLLAMTVQSVILDGE 333
Query: 303 MLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHEL 362
M+V+D S + + N ++ A +++ + C+ +DVL++ +I ER L
Sbjct: 334 MMVFDKSELIYRDKSENTDV--KAIKASNAELRPCFCVYDVLFLNGKCLIMVPYAERFRL 391
Query: 363 LQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVL 422
L+ ++K G + C + N + + + + I+ EG+V+
Sbjct: 392 LKTIIKEKVGFVAI-----------------CHRIKVKNSEHLVELLNQAIDAHQEGVVI 434
Query: 423 KDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALA--- 478
K S + P +R+ W K+KP+YI SD D+LIIGG+Y R + FLV +
Sbjct: 435 KKENSVYSPNERNAGWYKIKPDYIDNMVSDFDLLIIGGFYNFKRTF--INTFLVGVMDDR 492
Query: 479 ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA-------PPSFYQ 531
+R P F++ +VG GLS+++ + + L+ ++++ K PP
Sbjct: 493 DRENP-----VFLAVTKVGIGLSNDQWKQLNSSLRQHWQEVVARKEGRTTVTEEPPELRW 547
Query: 532 VTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCL 591
+ PDVWI P+ SI+L + +++ F+ Y++RFPRI +R DK + D
Sbjct: 548 ----GQTPPDVWIH-PKHSIVLQLKGS-ELVQTSSFATTYTIRFPRITAIRSDKTYTDVT 601
Query: 592 DVQSFVELVHSSNGTTQKGKEY----GGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDV 647
+ +L ++ + K + L K K+ ++ + + +H ++ V
Sbjct: 602 SKDEYDQLCAANTKVAKLAKRHVTNSSNLPGRKRKKTSPLQRTRSTRLHLSVNHIDESTV 661
Query: 648 SDIKGETSIFSDMVFCIL 665
I ++ S + FCIL
Sbjct: 662 DLID---NVCSGLDFCIL 676
>gi|403182787|gb|EJY57630.1| AAEL017365-PA, partial [Aedes aegypti]
Length = 925
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 180/659 (27%), Positives = 302/659 (45%), Gaps = 87/659 (13%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNF 105
F LRL+LP+ DRER SYG++ L + I LG+S+ S +A RK ++G+F
Sbjct: 68 FPILRLLLPAADRERDSYGIRVKTLRDLYIKILGISETSIEA------RKLSGNGSSGDF 121
Query: 106 PMVAAEVLQRRQGMI--SGGLTIKELNDLLDRLAS---SENRAEKISVLSTLIKKTNAQE 160
A + +G +T+ ++N LD + + R++ L +++ +
Sbjct: 122 ---ADRIFTLMRGRCPEECHMTVWDVNQHLDAMGQHYQNGRRSKTQDELIQMVQGMTQLD 178
Query: 161 MKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEV 220
KW+I IILK+L+LG+S+ + +HP A LF+ L VCE ++ + + V
Sbjct: 179 QKWLIRIILKNLRLGMSQTKLLGLYHPKAGALFDRFSHLSKVCEAVESGEGLEEVGEPGV 238
Query: 221 GKAVR------PQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF 274
G AVR P L R+ D L E +E K DG+R QIHK G YFSR
Sbjct: 239 GMAVRLFNPVKPMLCQRV-DLKLVDGMLKKDEFWLETKMDGERFQIHKEGQVYKYFSR-- 295
Query: 275 LDHSEYGHAMSKIIEQ----------NVL---VDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+ EY H + Q N+L V ILDGEM+V+D S + + N +
Sbjct: 296 -NSYEYSHVFGENANQPGATLTPYLSNLLAMTVQSVILDGEMMVFDKSELIYRDKSENTD 354
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ A +++ + C+ +DVL++ +I ER LL+ ++K G +
Sbjct: 355 V--KAIKASNAELRPCFCVYDVLFLNGKCLIMVPYAERIRLLKTIIKEKVGFVAI----- 407
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
C + N + + + + I+ EG+V+K S + P +R+ W K+
Sbjct: 408 ------------CHRIKVKNSEHLVELLNQAIDAHQEGVVIKKENSVYSPNERNAGWYKI 455
Query: 442 KPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALA---ERPAPDTYPRRFISFCRVG 497
KP+YI SD D+LIIGG+Y R + FLV + +R P F++ +VG
Sbjct: 456 KPDYIDNMVSDFDLLIIGGFYNFKRTF--INTFLVGVMDDRDRENP-----VFLAVTKVG 508
Query: 498 TGLSDEELDAVVTKLKPYFRKYEYPKRA-------PPSFYQVTNNSKERPDVWIESPEKS 550
GLS+++ + + L+ ++++ K PP + PDVWI P+ S
Sbjct: 509 IGLSNDQWKQLNSSLRQHWQEVVARKEGRTTVTEEPPELRW----GQTPPDVWIH-PKHS 563
Query: 551 IILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG 610
I+L + +++ F+ Y++RFPRI +R DK + D + +L ++ +
Sbjct: 564 IVLQLKGS-ELVQTSSFATTYTIRFPRITAIRSDKTYTDVTSKDEYDQLCAANTKVAKLA 622
Query: 611 KEY----GGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
K + L K K+ ++ + + +H ++ V I ++ S + FCIL
Sbjct: 623 KRHVTNSSNLPGRKRKKTSPLQRTRSTRLHLSVNHIDESTVDLID---NVCSGLDFCIL 678
>gi|347964176|ref|XP_310455.4| AGAP000623-PA [Anopheles gambiae str. PEST]
gi|333466853|gb|EAA06537.4| AGAP000623-PA [Anopheles gambiae str. PEST]
Length = 914
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 177/618 (28%), Positives = 292/618 (47%), Gaps = 68/618 (11%)
Query: 49 LRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMV 108
LRL+LP LDRER +YGL+E LA + ALG+ + S D RL++ A G+
Sbjct: 53 LRLLLPGLDRERKAYGLRERSLAEAYVRALGLDRRSEDVQRLLSAATDDLATRLGS---- 108
Query: 109 AAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMII 168
+L R + G LT+ ++N LD +A A + ++ LI++ + + +W++ I+
Sbjct: 109 ---LLHGRCPAV-GDLTVADVNARLDAIADGGPTAARTELVQ-LIERASPLDQRWLVRIL 163
Query: 169 LKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDR----NQRHKRQDIEVGKA- 223
L++L+L +S + I +HP A +++ DLK + E+++ R N+ D V +
Sbjct: 164 LRNLRLAVSSRRILQLYHPSAPTIYDGASDLKQMVEQIESRQATANELLDEPDGAVIRPL 223
Query: 224 --VRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-Y 280
VRP L R+ + L +E K DG+R Q+H +G Y+SR+ D+SE +
Sbjct: 224 HFVRPMLCQRL-ELRQVGELLRRDAYWLETKMDGERFQVHWDGETFRYYSRNGHDYSESF 282
Query: 281 GHAMSKI------IEQNVL---VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS 331
G + ++ + +L V +LDGEM+V+D R+ + ++ KA R G +
Sbjct: 283 GRSADQVGGTLTPMLATLLAPSVRSLVLDGEMMVFDRRTLRYRDKCDGTDV-KALRPGNT 341
Query: 332 SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
R C+ A+DVL+ S+ ER LL + V+ G LE
Sbjct: 342 QLRP-CFCAYDVLHHNGRSLAGVPYAERARLLAESVREQFGFLER--------------- 385
Query: 392 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYIRA-G 449
C + + + + I+ R EG+VLK + + P R+G W K+KP+Y+
Sbjct: 386 --CRRVRVRDPPHLLELINGAIDERQEGVVLKREDAPYRPNRRAGTGWYKIKPDYVDGLV 443
Query: 450 SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPR-RFISFCRVGTGLSDEELDAV 508
D D+L++GG+Y +R V FLV +A R T PR ++S +V GL E +
Sbjct: 444 VDFDLLVLGGFY--NQRRTYVNAFLVGVAAR----TTPRPEYLSVAKVSMGLGTLEWQQL 497
Query: 509 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS 568
L+P++R + Q + PDVWI +P SI L + +RS+ ++
Sbjct: 498 NQTLRPHWRTGPVDGGDGGAVVQCGQTA---PDVWI-APADSITLQLRGS-ELVRSDSYA 552
Query: 569 APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG--------KEYGGLQDDK 620
A Y++RFPRI VR DK + + ++ S+ G K + L+D
Sbjct: 553 AGYTIRFPRIVTVRPDKLPDEVCTLDELEQVAGSNRAAPSAGGQRATKLAKRHVTLEDLS 612
Query: 621 PKQFRSSRKGEKKNVSIV 638
S K +K ++V
Sbjct: 613 APPTVSKAKAPRKRAALV 630
>gi|367006613|ref|XP_003688037.1| hypothetical protein TPHA_0M00260 [Tetrapisispora phaffii CBS 4417]
gi|357526344|emb|CCE65603.1| hypothetical protein TPHA_0M00260 [Tetrapisispora phaffii CBS 4417]
Length = 966
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 186/645 (28%), Positives = 304/645 (47%), Gaps = 93/645 (14%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWR-KGGAAPNA 102
D + ALRLILP R+R +Y ++E L + D L + K+S RL W+ K + N
Sbjct: 73 DIYPALRLILPY--RDRRNYYIREHTLIRIVCDYLKLQKNSVTEQRLRRWKQKARRSINL 130
Query: 103 GNFPMVAAEVLQRRQGMISG-GLTIKELNDLLDRLA-----------SSENRAEKISVLS 150
+F + E+ +R +S +TI +LN +LD L+ SS + ++ +
Sbjct: 131 SSFCI--QEIKKRLSEPVSKEKITIDKLNSILDSLSMERSSSKITNGSSGKKLSQLESIK 188
Query: 151 TLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRN 210
+ + E+++ I++K +G E + +HPDA D +V +L +V EKL + N
Sbjct: 189 YCFENMSFIELEYFFDILIKARLIGGLEHKFLNAWHPDANDYLSVVSELNIVTEKLWNPN 248
Query: 211 QRHKRQDIEVG--KAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSE 266
R +D+ + A PQLA ++ ++ + + IE K DG+RIQIH G +
Sbjct: 249 FRLNSKDLTIALHNAFEPQLAKKVNLSYEVLSRRMNNKFTIEEKMDGERIQIHYMDYGHQ 308
Query: 267 IHYFSRSFLDHSE-YGH-----AMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQ 320
I YFSR D++ YG +SK ++ N V CILDGEM+ +D S N FG +
Sbjct: 309 IKYFSRRGNDYTYLYGKDKSTATISKYLQLNEDVKECILDGEMVSYDKSRNCILPFGMVK 368
Query: 321 EIAKAAR--DGLSSDRQLC---YFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLE 375
A + DGL +D LC + FDVL++ + + + L +R E L ++ P K +E
Sbjct: 369 SGAANSLKIDGLEND--LCSPLFIVFDVLFLNGSPLTNLPLYQRKEYLSNILTPKKSHIE 426
Query: 376 TLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRS 435
L +AH+ + + + I EGIVLK S + GDR+
Sbjct: 427 ILKFS-----------------IAHDSESIRSALQAAISVGSEGIVLKKYDSLYSVGDRN 469
Query: 436 GKWLKLKPEYI-RAGSDLDVLIIG---GYYGSGRRGGEVAQF-----------LVAL--- 477
W+K+KPEY+ + G +LD+++IG G S G V + ++ L
Sbjct: 470 NDWIKVKPEYLEQFGENLDLIVIGRDPGKKDSLMCGVAVLENEESYEKILQEEVITLTSD 529
Query: 478 ---AERPAPDTYPRR------FISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ P+ P R FISFC + G+S+EE + K ++K+ APP+
Sbjct: 530 DDDSQNNIPEDKPIRTKRITKFISFCVIANGISNEEFKEIDRKTFGCWKKFS--DEAPPT 587
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRS-----EVFSAPYSLRFPRIDRVRY 583
Y P WI +P S++L + + R++ + + F Y+L R+R
Sbjct: 588 DY--LEFGTRLPVEWI-NPHDSVVLEVKA--RSLENNEALRDKFKTGYTLYGAYCRRIRT 642
Query: 584 DKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSR 628
DK ++DC +F +LV ++N + YG K K+ R+S+
Sbjct: 643 DKDFNDCY---TFSDLVIATNKKRSSSELYGNHSHIKKKRSRTSK 684
>gi|336244781|gb|AEI28308.1| ATP-dependent DNA ligase IV, partial [Trachemys scripta]
Length = 353
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/372 (36%), Positives = 210/372 (56%), Gaps = 37/372 (9%)
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQGMISGGLT 125
E++LA I+ L + K+ DA++L+N+R G+ +AG+F M+A VL+ R G LT
Sbjct: 1 ETMLAKLYIELLNLPKEGKDALKLLNYRTPTGSHGDAGDFAMIAYFVLKPRCPK-QGRLT 59
Query: 126 IKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
I+++N+LLD +AS+ K V L LI +++A E KW+I +I+KDLKLG+S+++IF
Sbjct: 60 IQQVNELLDSVASNNAAKRKDLVKKSLLQLITQSSALEQKWLIRMIIKDLKLGVSQQTIF 119
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
FHPDA +L NVT DL+ VC +L D + I + A +P LA I + +++
Sbjct: 120 SLFHPDAAELHNVTTDLEKVCRQLHDPSVSLSDVSIMLFSAFKPMLA-AIANVQQIEKQM 178
Query: 243 HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDH--SEYGH-----AMSKIIEQNVL-- 293
+ + IE K DG+R+Q+HK+G YFSR+ D+ ++G +++ I NV
Sbjct: 179 NHQSFYIETKLDGERMQMHKDGDVYKYFSRNGFDYYTQQFGASPLEGSLTPFI-HNVFKN 237
Query: 294 -VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVI 352
+ CILDGEM+ ++ + F + GS +I K A D SD Q C+ FDVL V D +
Sbjct: 238 SIQNCILDGEMMAYNPNTQTFMQKGSKFDIKKMADD---SDLQTCFCVFDVLMVNDQKLG 294
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
H+ L +R+E+L ++ P GR+ + H + R EV E
Sbjct: 295 HEILSKRYEILNELFTPITGRIHIV---HKTQASTRK--------------EVVDALNEA 337
Query: 413 IENRDEGIVLKD 424
I+NR+EGI++KD
Sbjct: 338 IDNREEGIMIKD 349
>gi|355699361|gb|AES01102.1| ligase IV, DNA, ATP-dependent [Mustela putorius furo]
Length = 368
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 203/355 (57%), Gaps = 29/355 (8%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY-----------CDSVD-YFSALRLILPSLDRE 59
L S IQ++K A+K FR+FLD++ D D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQRSKGRAEKIRHFREFLDSWRRFHNALHKNQKDVKDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + K DA++L+N+R G +AG+F +A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPKGGKDALKLLNYRTPTGTRGDAGDFATIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++ND+LD +AS+ + K + L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQQVNDILDSIASNNSARRKDLIKKSLLQLISQSSALEQKWLIRMIVKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
SE+S+F FH DA +L NVT DL+ VC +L D + I + A +P LA I D
Sbjct: 198 FSEQSVFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISITLFSAFKPMLAA-IADI 256
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIE 289
+ + + IE K DG+R+Q+HK G E YFSR+ +++ ++G +++ I
Sbjct: 257 ERIEKDMKHQSFYIETKLDGERMQMHKQGGEYQYFSRNGFNYTDQFGKSPQEGSLTPFIH 316
Query: 290 QNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFD 342
D CILDGEM+ ++ + F + G+ +I + D SD Q CY FD
Sbjct: 317 SAFKTDIQICILDGEMMAFNPNTQTFMQKGTKFDIKRMVED---SDLQTCYCVFD 368
>gi|336244795|gb|AEI28315.1| ATP-dependent DNA ligase IV, partial [Crocodylus siamensis]
Length = 352
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 131/371 (35%), Positives = 209/371 (56%), Gaps = 36/371 (9%)
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQGMISGGLT 125
E++LA I+ L + K+ DA++L+N+R G+ +AG+F M+A VL+ R G LT
Sbjct: 1 ETMLAKLYIELLNLPKEGKDALKLLNYRTPAGSRGDAGDFAMIAYFVLKPRCPE-QGKLT 59
Query: 126 IKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
IK++N+LLD +AS+ K V L LI +++A E KW+I +I+KDLKLG+S+++IF
Sbjct: 60 IKQVNELLDSIASNNAAKRKDLVKKSLLQLITQSSALEQKWLIRMIIKDLKLGVSQQTIF 119
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
FHPDA +L NVT DL+ VC +L D + I + A +P LA I + +++
Sbjct: 120 SIFHPDAAELHNVTTDLEKVCRQLHDPSVSLTDVSIALFSAFKPMLA-AIANIQQIEKQM 178
Query: 243 HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYG-----HAMSKIIEQNVL--- 293
+ + IE K DG+R+Q+HK+G YFSR+ D++ ++G +++ I NV
Sbjct: 179 NNQHFFIETKLDGERMQMHKDGDVYKYFSRNGYDYTQQFGPSPLEGSLTPFI-HNVFKSN 237
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIH 353
+ CILDGEM+ ++ + F + G+ +I + + SD Q C+ FDVL V D + H
Sbjct: 238 IQNCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEE---SDLQTCFCVFDVLMVNDQKLGH 294
Query: 354 QSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETI 413
+ L +R+E++ ++ P GR+ + HG EV E I
Sbjct: 295 EILSKRYEIMNELFTPVTGRMHIVHKTHGSTR-----------------KEVVDALNEAI 337
Query: 414 ENRDEGIVLKD 424
+NR+EGI++KD
Sbjct: 338 DNREEGIMVKD 348
>gi|336244789|gb|AEI28312.1| ATP-dependent DNA ligase IV, partial [Anas platyrhynchos]
Length = 352
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/372 (35%), Positives = 205/372 (55%), Gaps = 38/372 (10%)
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQGMISGGLT 125
E++LA I+ L + KD DA +L+N+R G+ +AG+F M+A VL+ R G LT
Sbjct: 1 ETMLAKLYIELLNLPKDGKDAAKLLNYRTPAGSRGDAGDFAMIAYFVLKPRSPK-RGRLT 59
Query: 126 IKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
++++N+LLD +A++ K + L LI ++ A E KW+I +I+KDLKLGIS+++IF
Sbjct: 60 VEQVNELLDAIANNNAARNKGQLKKSLLQLITQSTALEQKWLIRMIIKDLKLGISQQTIF 119
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
FHPDA +L NVT DL+ VC +L D I + A +P LA I D +++
Sbjct: 120 SIFHPDAVELHNVTTDLEKVCRQLHDPTVSLSDVSITLFSAFKPMLAA-IADVQQIEKQM 178
Query: 243 HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGHA---------MSKIIEQNV 292
+ + IE K DG+RIQ+HK+G YFSR+ D++ ++G + + K+ + N
Sbjct: 179 NNQTFYIETKLDGERIQMHKDGDVYKYFSRNGFDYTQQFGASPLDGSLTPFIHKVFKDN- 237
Query: 293 LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVI 352
+ CILDGEM+ ++ F + G+ +I + D SD Q C+ FDVL V D +
Sbjct: 238 -IQNCILDGEMMAYNPETQTFMQKGNKFDIKRMVED---SDLQTCFCVFDVLMVNDQKLG 293
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
H++L +R+E+L V P GR+ + H + R EV
Sbjct: 294 HEALSKRYEILSNVFTPVTGRIHVV---HKKTARTRK--------------EVIDALNVA 336
Query: 413 IENRDEGIVLKD 424
I+NR+EGI++KD
Sbjct: 337 IDNREEGIMVKD 348
>gi|336244803|gb|AEI28319.1| ATP-dependent DNA ligase IV, partial [Batrachuperus yenyuanensis]
Length = 352
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/371 (36%), Positives = 210/371 (56%), Gaps = 36/371 (9%)
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQGMISGGLT 125
E++LA I+ LG+ K+ DA++L+N+R G+ +AG+F M+A VL+ R G LT
Sbjct: 1 ETMLAKLYIEVLGLPKEGKDALKLLNYRAPSGSHGDAGDFAMIAYFVLKPRFPK-HGSLT 59
Query: 126 IKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
I+++NDLLD +A++ +K V L LI +++A E KW+I +I+KD+KLG S+++IF
Sbjct: 60 IQQVNDLLDGIANNNASKKKDLVKKSLLQLITQSSALEQKWLIRMIIKDMKLGFSQQTIF 119
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
FHPDA +L NVT DL+ VC +L D + I + A +P LA I + +++
Sbjct: 120 SIFHPDAIELHNVTTDLEKVCLQLHDPSLSLSNVSIMLFSAFKPMLA-AIANIKNIEKQM 178
Query: 243 HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYG-----HAMSKIIEQNVL--- 293
+ + IE K DG+R+Q+HK+G YFSR+ D++ ++G +++ I NV
Sbjct: 179 NNQSFYIETKLDGERMQMHKDGDVYKYFSRNGFDYTQQFGASPLDDSLTPFI-HNVFRID 237
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIH 353
V CILDGEM+ ++ + F + GS +I + D S+ Q CY FDVL + D + H
Sbjct: 238 VQNCILDGEMMAFNPNTQTFMQKGSKFDIKRMVDD---SELQTCYCVFDVLMLNDQKLAH 294
Query: 354 QSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETI 413
++L++R+E L + P GRL H E A + V E I
Sbjct: 295 ETLRKRYETLHNLFTPITGRL-----------HAVHNKE------ASSKKNVVDALNEAI 337
Query: 414 ENRDEGIVLKD 424
+NR+EGI++KD
Sbjct: 338 DNREEGIMVKD 348
>gi|336244793|gb|AEI28314.1| ATP-dependent DNA ligase IV, partial [Dibamus bourreti]
Length = 352
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/370 (35%), Positives = 208/370 (56%), Gaps = 34/370 (9%)
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRKGGAA-PNAGNFPMVAAEVLQRRQGMISGGLT 125
E++LA I+ L + KD DA++L+N+R ++ +AG+F MVA VL+ R G LT
Sbjct: 1 ETMLAKLYIELLNLPKDGKDALKLLNYRTPTSSRGDAGDFAMVAYFVLKPRCPQ-QGQLT 59
Query: 126 IKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
I+++NDLLD ++S+ K V L LI +++A E KW+I +ILKDLKLGIS+++ F
Sbjct: 60 IEQVNDLLDSVSSNNAAKRKDLVKKSLLQLITQSSALEQKWLIRMILKDLKLGISQQTFF 119
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
FHPDA +L +VT DL+ VC++L D + I + A +P LA I + ++
Sbjct: 120 SLFHPDAAELHSVTTDLEKVCKQLHDPSVSVSDVSITLFSAFKPMLA-AIANVQQIETQM 178
Query: 243 HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIEQ--NVLV 294
+ + IE K DG+R+Q+H++G YFSR+ D++ ++G +++ I N
Sbjct: 179 NHQSFYIETKLDGERMQMHRDGDVYKYFSRNGYDYTHQFGASPLEGSLTLFIHNVFNSNF 238
Query: 295 DRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQ 354
CILDGEM+ ++ S F + GS +I + D S+ Q C+ FDVL V D + H+
Sbjct: 239 QNCILDGEMMAYNPSTETFMQKGSKFDIKRMVDD---SELQTCFCVFDVLMVNDQKLSHE 295
Query: 355 SLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIE 414
L +R+E+L K+ P GR++ + H + R EV E I+
Sbjct: 296 ILSKRYEMLNKIFTPIPGRIQII---HKSEAKTRK--------------EVIDALNEAID 338
Query: 415 NRDEGIVLKD 424
NR+EGI++KD
Sbjct: 339 NREEGIMIKD 348
>gi|298714787|emb|CBJ25686.1| DNA ligase, putative [Ectocarpus siliculosus]
Length = 1071
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 174/630 (27%), Positives = 299/630 (47%), Gaps = 68/630 (10%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDA-LGMSKDSADAVRLINWRKG--GAAPN- 101
F +RL+LP LD R YG++ + +A+ D +K +RL ++ ++P
Sbjct: 69 FPLIRLLLPELDNLRDKYGMRTAKMASLFADLYFPNNKKGEGYLRLQSYTDPDRNSSPGD 128
Query: 102 -----AGNFPMVAAEVLQRRQGMI----SGGLTIKELNDLLDRLASSENRAEKISVLSTL 152
G+ + VL + I + TI+++ND L LA++ N + VL+ +
Sbjct: 129 KRWQVTGDLALTLEYVLTESRFGIKAVDATTWTIRDVNDALSDLANAPNDQRRKQVLTRI 188
Query: 153 IKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQR 212
+ KWI +ILK+LK+ I +K + +FHP A D +N T L+ VC ++
Sbjct: 189 RTNCSPMNQKWIARMILKNLKINI-KKEVLKKFHPGALDYYNRTTSLRRVCSAFIGKHSS 247
Query: 213 HKRQ-DIEVGKAVRPQLAMR----IGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEI 267
++EV P LAM +G + L G+ ++ K DG+R+ H+ G+++
Sbjct: 248 VTATFNLEVFTTFSPMLAMNFFYGLGKIVPS---LQGRPFCMDVKLDGERMLCHREGNKV 304
Query: 268 HYFSRSFLDHSE-YGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAA 326
+F+R+ D+++ YG A++ I V +C+LDGE++ WD + FGSN+ AK
Sbjct: 305 KWFTRNAKDYTDKYGAALTPHIVGGVSAHKCVLDGEVVTWDDNTGSMVPFGSNRTYAKEE 364
Query: 327 RDGL-SSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPS-----------KGRL 374
+G R L Y FDVLY + + E++++ V+ S G L
Sbjct: 365 LEGRGGGTRWLFYVVFDVLYAEGSGGGLEDGGTMEEIVREAVRNSIAPCPPPTEVQAGNL 424
Query: 375 ETLVPD---------HGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENR-----DEGI 420
L D N H R + W + A + E +K E E R +EG+
Sbjct: 425 TALPLDVRRKVLRSIVTENEH-RLEFVKSWEVSAGDEVERKKQLDECFEQRAIHLNEEGL 483
Query: 421 VLKDLGSKWEPGDRSGK---WLKLKPEYIRAGSDLDVLIIGGYYGSGR-RGGEVAQFLVA 476
V+KDL + GD+S K W+K+KPEY D+D+LI+ + +G+ R G +++FLV
Sbjct: 484 VVKDLHGHYMIGDKSKKIPLWIKMKPEYSDQTEDMDLLILAAGFANGKMRSGLLSKFLVG 543
Query: 477 LAERPAPDTYPRR-FISFCRVGTGLSDEELDAVVTKLKPYFRKYEY--PKRAPPSFYQVT 533
+A P D PR+ + RVGTG S EL+ + LK ++ ++ P P +
Sbjct: 544 VAV-PNEDRQPRKEYYPLARVGTGYSINELEDLNELLKDKWKSFDTSDPTHFDPHRTGIK 602
Query: 534 NNSKERPDV--WIESPEKSIILSITSDIRTIRSEVFSAPY-SLRFPRIDRVRYDKPWHDC 590
+S++ + WI + E S+ L + + +++ + + ++RFPR+ +R DK C
Sbjct: 603 KSSRDGVPLTKWIAA-EDSVCLQVKC-MEIVKASDWPGVFCTMRFPRVTHIRKDKGSEGC 660
Query: 591 LDVQSFVEL-----VHSSNGTTQKGKEYGG 615
LD + + ++ G ++ +GG
Sbjct: 661 LDTTELAAIQARPRLSAAPGGHRQNNTHGG 690
>gi|255089240|ref|XP_002506542.1| predicted protein [Micromonas sp. RCC299]
gi|226521814|gb|ACO67800.1| predicted protein [Micromonas sp. RCC299]
Length = 291
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 169/282 (59%), Gaps = 15/282 (5%)
Query: 45 YFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKD-SADAVRLINWRKGGAAPNAG 103
+F+ RL+LP +D+ER +Y LKE+ LA + ALG+ ++ S +L WRKGGA G
Sbjct: 16 FFALYRLMLPHIDKERSAYHLKEAALARVIGLALGLDRNRSPHFKKLEAWRKGGA----G 71
Query: 104 NFPMVAAEVLQRRQGMISGGL------TIKELNDLLDRLASSENRAEKISVLSTLIKKTN 157
F E M+ G + TI ++ND LD+LA+ + EK+ V++ L+ K +
Sbjct: 72 IFVDAVQECCA--HHMVDGYVKRVDRATIGDVNDALDKLATLKTNNEKLPVVAGLMDKMD 129
Query: 158 AQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD 217
A++M+W+ II+KD+KLG E +I FH DAEDL+NV CDL+ VCE L + KRQD
Sbjct: 130 ARQMRWLSAIIIKDMKLGYGEAAIIRHFHRDAEDLYNVCCDLRRVCETLHTKAVAFKRQD 189
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLD 276
++ G VR A + D AWR + +E VIE KFDG+RIQ+H+ + HYF+R+ D
Sbjct: 190 LQPGSLVRSMNAAKKRDCDEAWRHVQRREFVIEHKFDGERIQVHRVDARTFHYFTRNNFD 249
Query: 277 HSEYGHA-MSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFG 317
G++ M+++ + + DRC+LDGE+++W + FG
Sbjct: 250 FGPRGYSVMNRLFRRRLATDRCVLDGELVLWHKEHKAYVPFG 291
>gi|336244797|gb|AEI28316.1| ATP-dependent DNA ligase IV, partial [Carettochelys insculpta]
Length = 352
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 209/371 (56%), Gaps = 36/371 (9%)
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQGMISGGLT 125
E++LA I+ L + K+ DA++L+N+R G+ +AG+F M+A VL+ R G LT
Sbjct: 1 ETMLAKLYIELLNLPKEGQDALKLLNYRTPTGSHGDAGDFAMIAYFVLKSRCPE-QGSLT 59
Query: 126 IKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
I+++N+LLD +AS+ K V L LI +++A E KW+I +I+KDLKLG+S+++IF
Sbjct: 60 IQQVNELLDSIASNNAGKRKDLVKKNLLQLITRSSALEQKWLIRMIIKDLKLGVSQQTIF 119
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
FHPDA +L NVT DL+ VC +L D I + A +P LA I + + +++
Sbjct: 120 SLFHPDAAELHNVTTDLEKVCRQLHDPAVSLSDVSIMLFSAFKPMLA-AIANVNQIEKQM 178
Query: 243 HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIEQNVL--- 293
+ + IE K DG+R+Q+HK+G YFSR+ D++ ++G +++ I NV
Sbjct: 179 NHQRFYIETKLDGERMQMHKDGDVYKYFSRNGFDYTQQFGASPLEGSLTPFI-HNVFKNS 237
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIH 353
+ CILDGEM+ ++ S F + G+ +I + D SD Q C+ FDVL V D + H
Sbjct: 238 IQNCILDGEMMAYNPSTQTFMQKGNKFDIKRMVDD---SDLQTCFCVFDVLMVNDQKLGH 294
Query: 354 QSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETI 413
+ L +R E+L ++ P GR+ + H + R EV E I
Sbjct: 295 EVLSKRDEILNELFTPVPGRIHIV---HKTQASTRK--------------EVIDALNEAI 337
Query: 414 ENRDEGIVLKD 424
++R+EGI++KD
Sbjct: 338 DSREEGIMIKD 348
>gi|50306293|ref|XP_453119.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74606642|sp|Q6CSH0.1|DNLI4_KLULA RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|49642253|emb|CAH00215.1| KLLA0D01089p [Kluyveromyces lactis]
Length = 907
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 173/593 (29%), Positives = 277/593 (46%), Gaps = 70/593 (11%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNF 105
+ ALRLI+P R+R Y +KE+ L L L + K S RL+ W++ A
Sbjct: 62 YPALRLIVPF--RDRRIYNVKENTLIKALCRYLRLPKSSETENRLLRWKQRAA--RGVKL 117
Query: 106 PMVAAEVLQRRQGMISGG--LTIKELNDLLDRLASSENRAEKISVLST--------LIKK 155
E +++RQ G +TI ELN LD + S E +++ ++ +
Sbjct: 118 SDFCVEEIRKRQKDYEGANRITIDELNGYLDEV-SQEGNGKRMGYMALTDSRAFNYCLNH 176
Query: 156 TNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKR 215
EMK+ IILK L E +HPDA D +V DL ++ ++L + N+R ++
Sbjct: 177 MTFMEMKFFFDIILKTRVLSGLENMFLTAWHPDATDYLSVVSDLDVLSQRLYNPNERLRQ 236
Query: 216 QD--IEVGKAVRPQLAMRIGDAHAAWRKLHGK---EVVIECKFDGDRIQIH--KNGSEIH 268
D I + A PQLA R H ++ ++ K + +IE K DG+R+QIH G +I
Sbjct: 237 TDLSITISHAFEPQLAKR---THLSYERVASKLQHDFIIEEKMDGERLQIHYINYGEQIK 293
Query: 269 YFSRSFLDHSE-YGH-----AMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFG----- 317
Y SR +D S YG +S ++ + V CILDGEM+ +DT + FG
Sbjct: 294 YLSRRGVDFSYLYGENSSSGPISPSLKLHFNVKDCILDGEMITYDTEKDIVLPFGLVKSS 353
Query: 318 -SNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLET 376
NQ ++ A + + + AFD++Y+ S+ + +L+ R + L K++ P + +E
Sbjct: 354 AMNQIQSELAGIAPTESYKPLFVAFDLVYLNGKSLTNLALERRKDYLTKILTPVERSVEI 413
Query: 377 LVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSG 436
+ + A N + ++ ++ I EGIVLK L SK+ G R+
Sbjct: 414 I-----------------QYMKAINAEAIKDSLEQAISMGSEGIVLKHLHSKYFVGSRNT 456
Query: 437 KWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALA-ERPAPDTYPRRFISFC 494
W+K+KPEY+ + G ++D+LII GR G+ F L+ P RFISFC
Sbjct: 457 DWIKIKPEYLEQFGENMDLLII------GREQGKKDSFFCGLSISDPNEVAEKPRFISFC 510
Query: 495 RVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS 554
+ GLS+EE + K + K+ PPS + +K P WI PE S++L
Sbjct: 511 TIANGLSNEEFKDIERKT---WGKWHIFSEDPPSPNLLGFGTK-VPYEWIH-PEDSVVLE 565
Query: 555 ITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSN 604
+ + D + + + +L F ++RYDK W F ++ + N
Sbjct: 566 VKARAIDTKESEKRKYRSGCTLHFGYCKQIRYDKDWKTVASFSEFEDMKDARN 618
>gi|401623677|gb|EJS41768.1| dnl4p [Saccharomyces arboricola H-6]
Length = 946
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 192/671 (28%), Positives = 311/671 (46%), Gaps = 92/671 (13%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKG-GAAPNA 102
+ + AL L LP R+R Y +K+ VL + L + K+S RL +W++ G N
Sbjct: 68 NIYPALVLALPY--RDRRIYSIKDFVLIRTICSYLKLPKNSTTEQRLKDWKQYVGKGRNL 125
Query: 103 GNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSEN---RAEKISVLST----LIKK 155
+ ++ E+ +RR TI ++N LD L+ N R K + S ++
Sbjct: 126 SS--LLVEEIAKRRLEPNGKVNTIDDVNGYLDELSKERNTHGRGFKNLIKSKSFMYCLQN 183
Query: 156 TNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKR 215
E+K+ I+LK+ +G E + +HPDA+D +V DLK+V KL + R K
Sbjct: 184 MGFVELKYFFDIVLKNRVIGGQEHKFLNCWHPDAQDYLSVVSDLKVVTSKLYNPTVRLKD 243
Query: 216 QD--IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFS 271
D I+VG A PQLA ++ + + ++E K DG+RIQIH G I +FS
Sbjct: 244 DDLSIKVGFAFAPQLAKKVNLPYEKICHALRNDFLVEEKMDGERIQIHYMNYGKSIKFFS 303
Query: 272 RSFLDHSE-YGHAMSKIIEQNVL-----VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA 325
R +D++ YG ++S L V C+LDGEM+ +D FG + AK
Sbjct: 304 RRGVDYTYLYGASLSSGTISQYLKFSENVKECVLDGEMVTFDAIRKVILPFGLVKGSAKE 363
Query: 326 A---RDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
A D S+D Y FD+LY+ TS+ L +R + L ++KP K +E +
Sbjct: 364 ALSFNDINSNDFHPLYMVFDLLYLNGTSLTPLPLHQRKKYLSSILKPLKTVIEII----- 418
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLK 442
+ C+ NV+ ++K + I EG+VLK+ S + R+ W+K+K
Sbjct: 419 -------RFSRCY-----NVEAIKKSLEVAISLGSEGVVLKNYSSTYNVASRNSNWIKVK 466
Query: 443 PEYIRA-GSDLDVLIIGGYYG----------------SGRRGGEVAQFLV--ALAERPAP 483
PEY+ G +LD++IIG G +G++ E+ ++ A E+
Sbjct: 467 PEYLEEFGENLDLIIIGRDPGKKDSFMLGLLLLDEQETGQKNQEIPSQILNDASTEQQGI 526
Query: 484 DTYPR--RFISFCRVGTGLSDEELDAVVTKLKPYF-RKYEYPKRAPPSFYQVTNNSKERP 540
D+ + + +SFC + G+S EE + K + ++ R ++P PP+ + + P
Sbjct: 527 DSKKKVTKVVSFCSIANGISQEEFKEIDRKTRGHWKRTSDFP---PPT--SILQFGSKIP 581
Query: 541 DVWIESPEKSIILSITSDIRTIRS-----EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQS 595
WIE P +SI+L I S R++ + + ++ +L R+RYDK W DC +
Sbjct: 582 AEWIE-PSESIVLEIKS--RSLENTDTNIQRYATSCTLYGGYCRRIRYDKDWKDCYTLAD 638
Query: 596 FVE-LVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGET 654
E + N + Q GK L K K+ +VP F QT + K +
Sbjct: 639 LYENRLTRPNPSHQVGKPQLQLVQKKRKRV------------LVPDPFHQT--REQKPIS 684
Query: 655 SIFSDMVFCIL 665
SIF+ + F +L
Sbjct: 685 SIFTGLFFYVL 695
>gi|403216452|emb|CCK70949.1| hypothetical protein KNAG_0F02870 [Kazachstania naganishii CBS
8797]
Length = 954
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 186/678 (27%), Positives = 319/678 (47%), Gaps = 98/678 (14%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAG 103
+++ L L LP R+R +Y +K+ L + L + K S+ +L+NW++ A+ N
Sbjct: 66 NFYPVLILALPY--RDRRTYNIKDVTLIKAICLYLDLPKRSSTEKKLLNWKQR-ASRNER 122
Query: 104 NFPMVAAEVLQRRQGMISG---GLTIKELNDLLDRLASSEN-RAEKISVLST------LI 153
AE+ +R+ G +T+ +LN +LD LA+ ++ R + L+ +
Sbjct: 123 LSSFCVAEIRKRKSGPDPSKRQAITLDKLNSILDDLANGKSSRGQGSRTLADSSHFKFCL 182
Query: 154 KKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRH 213
+ + E+K+ I+LK +G E + + +HPDA D F+V DL V +KL + + R
Sbjct: 183 ENMSFIELKYFFDILLKVRIIGGHEHKLLNAWHPDAVDYFSVVSDLSSVTKKLYEPSVRL 242
Query: 214 KRQDI--EVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHY 269
+ +D+ ++G A P LA R+ ++ K G + IE K DG+RIQIH G+EI +
Sbjct: 243 RNEDLTLKIGSAFAPHLAKRLNISYEKILKKLGSDFSIEEKMDGERIQIHYMDYGNEIKF 302
Query: 270 FSRSFLDHSE-YGHAMSK-----IIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIA 323
SR D++ YG S ++ N V CILDGEM+ +D FG + A
Sbjct: 303 LSRRGTDYTYLYGGDTSTGTIACYLKLNENVKECILDGEMVTYDQEKQMILPFGLVKSSA 362
Query: 324 K--AARDGLSS-DRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPD 380
K +++ +S+ + AFD++Y+ TS++ L +R + L K++ G ++ +
Sbjct: 363 KNFLSKESISNGSYHPLFMAFDLVYLNGTSLVDLPLYQRKDYLSKILTKCNGFVDIV--- 419
Query: 381 HGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLK 440
S R +N++ + K I EGI+LK L S++ R+ W+K
Sbjct: 420 ----SFAR----------CNNLESITKSLAAAISVGSEGIILKKLNSRYMVASRNDSWIK 465
Query: 441 LKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALA---ERPAP------------- 483
+KP+Y++ G ++D++II GR G+ F+ AL + P P
Sbjct: 466 IKPQYLKQFGENMDLIII------GRDPGKKDAFMCALGVTIDDPQPRVLQQEENVNLDL 519
Query: 484 ---DTYPR--------RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV 532
D+ P +F+SFC + G+S+ E + K + +R+++ K PPS Y
Sbjct: 520 DTEDSEPETPKASRIVKFVSFCTIANGISNAEFKEIDQKTRGLWRRFDQVK--PPSEYLQ 577
Query: 533 TNNSKERPDVWIESPEKSIILSITS-DIRTIRSEV--FSAPYSLRFPRIDRVRYDKPWHD 589
K P WI+ P++S++L + S + S V + A +L VRYDK W
Sbjct: 578 FGTKK--PVEWID-PKESLVLEVKSRSLDNTESNVKKYRAGVTLFGGYCRAVRYDKDWTT 634
Query: 590 CLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKK-NVSIVPSHFLQTDVS 648
C V F ++ ++Y + + + +S KG KK N + +
Sbjct: 635 CYTVSEF-----------ERDRQYKLPKVNAGESITTSNKGRKKRNTTSILGVISPRKKR 683
Query: 649 DIKGETS-IFSDMVFCIL 665
+GE S IF ++ FC+L
Sbjct: 684 TPEGEHSDIFQNLHFCVL 701
>gi|336244805|gb|AEI28320.1| ATP-dependent DNA ligase IV, partial [Alligator sinensis]
Length = 352
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 207/371 (55%), Gaps = 36/371 (9%)
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQGMISGGLT 125
E++LA I+ L + K+ DA++L+N+R G+ +AG+F M A VL+ R G LT
Sbjct: 1 ETMLAKLYIELLNLPKEGKDALKLLNYRTPAGSRGDAGDFAMTAYFVLKPRCPE-QGKLT 59
Query: 126 IKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
I+++N+LLD +AS+ K V L LI +++A E KW+I +I+KDLKLG S+++IF
Sbjct: 60 IEQVNELLDSIASNNAAKRKDLVKKSLLQLITQSSALEQKWLIRMIIKDLKLGASQQTIF 119
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
FHPDA +L NVT DL+ VC +L D + I + A +P LA I + +++
Sbjct: 120 SIFHPDASELHNVTTDLEKVCRQLHDPSVSLTDVSIALFSAFKPMLA-AIANIQQIEKQM 178
Query: 243 HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYG-----HAMSKIIEQNVL--- 293
+ + IE K DG+R+Q+HK+G YFSR+ D++ ++G +++ I NV
Sbjct: 179 NNQCFYIETKLDGERMQMHKDGDVYKYFSRNGYDYTQQFGPSPLEGSLTPFI-HNVFKSN 237
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIH 353
+ CILDGEM+ ++ + F + G+ +I + + SD Q C+ FDVL V D + H
Sbjct: 238 IQNCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEE---SDLQTCFCVFDVLMVNDQKLGH 294
Query: 354 QSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETI 413
+ L +R+E+L +V P GR+ + H R EV E I
Sbjct: 295 EILSKRYEILNEVFTPVTGRMHVV---HKTRGSTR--------------KEVVDALNEAI 337
Query: 414 ENRDEGIVLKD 424
+NR+EGI++KD
Sbjct: 338 DNREEGIMVKD 348
>gi|195352416|ref|XP_002042708.1| GM17599 [Drosophila sechellia]
gi|194126739|gb|EDW48782.1| GM17599 [Drosophila sechellia]
Length = 671
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 171/591 (28%), Positives = 277/591 (46%), Gaps = 69/591 (11%)
Query: 108 VAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMI 167
V VL+ R L + +++ +LD +A+ E+ K L ++ + +E KW+I +
Sbjct: 8 VVYSVLKPRCFNPPSNLRLNQIHQMLDTIAN-EDTEVKQQQLICFTEQASPEEQKWLIRL 66
Query: 168 ILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKA---- 223
+LK L LGI E+ IF HP A+D++ DL VC L D+ + KA
Sbjct: 67 LLKSLGLGIGEQKIFGVLHPKAQDIYQRCSDLGHVCNLLADQTTDLDASTSKDSKAAVKF 126
Query: 224 ------------VRPQLAMRI-GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYF 270
+RP L R GD + + +E K DG+R Q+H + YF
Sbjct: 127 VNLNSVIRPFHQIRPMLCERFPGDIQEL---MQSDVLYLETKMDGERFQLHIDRGRFMYF 183
Query: 271 SRSFLDHS-EYGHAMSKIIEQNVL-------VDRCILDGEMLVWDTSLNRFAEFGSNQEI 322
SR+ +D++ +GH+ L ++ ILDGEM+VWDT+ RF E G N ++
Sbjct: 184 SRNGVDYTRNFGHSYDHGTLTPKLRGLLPLGLESIILDGEMMVWDTNKLRFREKGENTDV 243
Query: 323 AKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
+G Q C+ +D+LY S++ + +R LQK++ G L+ +
Sbjct: 244 KSLKPEG---SWQPCFVVYDLLYFNGKSLLDHTYIQRAYKLQKLIVEQSGVLQLM----- 295
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDR-SGKWLKL 441
R G +V E + F++ +++ EGIVLK GS+++PG R G W K
Sbjct: 296 ---RARKIG---------SVQEFNELFQQALDSHAEGIVLKKQGSRYQPGVRLGGGWYKD 343
Query: 442 KPEYIRAG-SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 500
K +YI+ ++ DVLIIG +Y R+ V FL+ + + PAP R F +G
Sbjct: 344 KADYIKGLITEFDVLIIGAFY--NRKRTFVDSFLLGVLQ-PAPPGSSNRPEVF-SIGVVA 399
Query: 501 SDEELDAVVT-KLKPYFRKYEYPKRAPPSFYQVTNNSKER---PDVWIESPEKSIILSIT 556
++ + V+ LKP++ ++ PP ++ KER PD+WIE P+ S+IL +
Sbjct: 400 NNTKQRGVLNHTLKPHW--HDVVNEPPPLWFHY--KPKERAGCPDLWIE-PQNSVILQVK 454
Query: 557 SDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGL 616
+ F+ SL FPR + R DKPW +C+ ++ F +L + K L
Sbjct: 455 AADLAPNGAFFTRK-SLHFPRTEMKRDDKPWSECMTLKEFNDLCQGPLAIKKLNKRQLRL 513
Query: 617 QD--DKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
+D K KQ R + E+ + + + + D S + +F + FCIL
Sbjct: 514 EDVTTKRKQMRMT-PSERSRLGLA-VYEKRYDASTSASTSKLFDGLSFCIL 562
>gi|150864147|ref|XP_001382860.2| DNA ligase IV [Scheffersomyces stipitis CBS 6054]
gi|149385403|gb|ABN64831.2| DNA ligase IV [Scheffersomyces stipitis CBS 6054]
Length = 939
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 180/693 (25%), Positives = 310/693 (44%), Gaps = 107/693 (15%)
Query: 27 KKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
KK S + F+ T+ + + F RL+ P D++R Y +++ LA ++ + +S
Sbjct: 46 KKVSVIQTFIKTFRIHIGDNIFPTARLVFP--DKDRRLYYIRDVTLARLIVKMYSIPPES 103
Query: 85 ADAVRLINWRKGGA--------APNAGNFPMVAAEVLQRRQG----MISGGLTIKELNDL 132
D L +W+ G + N + P+ A+ ++ R+ T+ E+N
Sbjct: 104 EDYKVLYHWKHGFQKEKRFTVDSNNLRDLPLRASRIIANRRESTPITTRHSYTVAEMNSK 163
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDL 192
LD L ++ E+I++L L+ + E++W++ IILK L E +HPDA L
Sbjct: 164 LDSLNDAKKSQEQIAILKPLLDSLSIPEIRWLLHIILKKSILVRFENYFLSVWHPDAPAL 223
Query: 193 FNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAV--RPQLAMRIGDAH-------------- 236
F V +L+ L ++ R + D+ V + RPQL+ ++ +
Sbjct: 224 FKVCNNLQKTFNYLVNQETRLNKNDLTVHPTLPFRPQLSFKLTKNYDKLIKDMSMTVPMD 283
Query: 237 ------AAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AM 284
A + L GK +E K DGDR+ +HK G ++SR D+S YG ++
Sbjct: 284 VNFQKMFAAKDLAGK-FYMEEKMDGDRMVLHKQGKHFKFYSRRLKDYSFLYGENLEIGSL 342
Query: 285 SKIIEQNV--LVDRCILDGEMLVWDTSLNRFAEFGS--NQEIAKAARDGLSSD---RQLC 337
+K + VD ILDGEM+ WD N FG+ + I ++ R + D +Q
Sbjct: 343 TKYLSNAFPSKVDSIILDGEMVAWDFKRNVVLPFGTLKSSAIQESVRQYTTIDQYEQQSS 402
Query: 338 Y---FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPC 394
Y FD+L++ T++ + L R ++LQK++ P RLE L+P
Sbjct: 403 YPFFLVFDILHINGTNLTNHPLFFRKDILQKIINPIPHRLE-LLP--------------- 446
Query: 395 WSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLD 453
S++ ++V++ +E + +R EGIV+K L SK+ G+R+ W+K+KPEY+ + G +LD
Sbjct: 447 -SIIGSTAEDVQRAMREVVSSRSEGIVVKHLQSKYFIGERNPHWVKVKPEYLEKFGENLD 505
Query: 454 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 513
+ +I G+ G ++ L + + F SFC V G +++E D + +
Sbjct: 506 LTVI------GKVPGVKISYMCGLK-----NDDDQVFYSFCTVANGFTEDEYDKI--ERI 552
Query: 514 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS-DIRTIRSEVFSAPYS 572
+ + Y + PPS +V N ++P WI P S++L I + I + ++ +
Sbjct: 553 THNKWIAYKDQLPPS--KVLNFGVKKPMHWIH-PRDSVVLEIKARSIDCTVEKTYAVGTT 609
Query: 573 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEK 632
L +R DK HDC + EY ++ K S K
Sbjct: 610 LHNLYCRSIREDKSIHDCTTIS-----------------EYKQIKAKYSKDLEKSHSANK 652
Query: 633 KNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
K + S + +K E+ +FS F IL
Sbjct: 653 KRRVLQDSFVQEQQPKRVKVESDLFSGFDFVIL 685
>gi|365763249|gb|EHN04779.1| Dnl4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 944
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 182/626 (29%), Positives = 294/626 (46%), Gaps = 77/626 (12%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNF 105
+ AL L LP R+R Y +K+ VL + L + K+SA RL +W++ GN
Sbjct: 70 YPALVLALPY--RDRRIYNIKDYVLIRTICSYLKLPKNSATEQRLKDWKQ--RVGKGGNL 125
Query: 106 P-MVAAEVLQRRQGMISGGLTIKELNDLLDRLAS---SENRAEKISVLST----LIKKTN 157
++ E+ +RR S +TI +N LD L+ + R K V S ++ +
Sbjct: 126 SSLLVEEIAKRRAEPSSKAITIDNVNHYLDSLSGDRFASGRGFKSLVKSKPFLHCVENMS 185
Query: 158 AQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD 217
E+K+ I+LK+ +G E + + +HPDA+D +V DLK+V KL D R K D
Sbjct: 186 FVELKYFFDIVLKNRVIGGQEHKLLNCWHPDAQDYLSVISDLKVVTSKLYDPKVRLKDDD 245
Query: 218 --IEVGKAVRPQLAMRIGDAH-AAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSR 272
I+VG A PQLA ++ ++ R LH + ++E K DG+RIQ+H G I +FSR
Sbjct: 246 LSIKVGFAFAPQLAKKVNLSYEKICRTLHD-DFLVEEKMDGERIQVHYMNYGESIKFFSR 304
Query: 273 SFLDHSE-YGHAMSK-IIEQNVL----VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAA 326
+D++ YG ++S I Q++ V C+LDGEM+ +D FG + IAK A
Sbjct: 305 RGIDYTYLYGASLSSGTISQHLRFTDSVKECVLDGEMVTFDAKRRVILPFGLVKGIAKEA 364
Query: 327 RDGLS---SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGL 383
S D Y FD+LY+ TS+ L +R + L ++ P K +E +
Sbjct: 365 LSFNSINNVDFHPLYMVFDLLYLNGTSLTPLPLHQRKQYLNSILSPLKNIVEIV------ 418
Query: 384 NSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKP 443
+ C+ V+ ++K + I EG+VLK S + R+ W+K+KP
Sbjct: 419 ------RSSRCYG-----VESIKKSLEVAISLGSEGVVLKYYNSSYNVASRNNNWIKVKP 467
Query: 444 EYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLV-------------------ALAERPAP 483
EY+ G +LD+++IG SG++ + LV + E+
Sbjct: 468 EYLEEFGENLDLIVIGR--DSGKKDSFMLGLLVLDEEEYKKHQGDSSEIVDHSSQEKHIQ 525
Query: 484 DTYPR--RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPD 541
++ R + +SFC + G+S EE + K + ++++ + APP+ + + P
Sbjct: 526 NSRRRVKKILSFCSIANGISQEEFKEIDRKTRGHWKRTS--EVAPPA--SILEFGSKIPA 581
Query: 542 VWIESPEKSIILSITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVE 598
WI+ P +SI+L I S D + ++ +L R+RYDK W DC + E
Sbjct: 582 EWID-PSESIVLEIKSRSLDNTETNMQKYATNCTLYGGYCKRIRYDKEWTDCYTLNDLYE 640
Query: 599 -LVHSSNGTTQKGKEYGGLQDDKPKQ 623
SN + Q + GL K K+
Sbjct: 641 SRTAKSNPSYQAERSQLGLIRKKRKR 666
>gi|113913529|gb|ABI48908.1| LIG4 [Saccharomyces pastorianus]
Length = 937
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 171/601 (28%), Positives = 279/601 (46%), Gaps = 73/601 (12%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAG 103
+ + AL L LP R+R Y +K+ VL + L + K+S RL +W++ +
Sbjct: 68 NIYPALILALPY--RDRRIYNIKDYVLIRTVCSYLKLPKNSPTEQRLKDWKQRVGKGRSL 125
Query: 104 NFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSEN---RAEKISVLST----LIKKT 156
+ ++ E+ +RR +T+ +ND LD L+ N R K V S ++
Sbjct: 126 S-SLLVEEISKRRTETTGKFITVDSINDYLDELSEEMNASGRGFKNLVKSKPFLYCLENM 184
Query: 157 NAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ 216
E+K+ I+LK+ +G E + + +HPDA+D +V DL++V KL D R K
Sbjct: 185 TFVELKYFFDIVLKNRVIGGQEHKLLNCWHPDAQDYLSVVSDLRVVTSKLYDPRVRLKND 244
Query: 217 D--IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSR 272
D I+VG A PQLA ++ ++ + +E K DG+RIQ+H G I++FSR
Sbjct: 245 DLSIKVGFAFAPQLAKKVNLSYEKICHALRNDFFVEEKMDGERIQVHYMNYGRSINFFSR 304
Query: 273 SFLDHSE-YGH-----AMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAA 326
+D++ YG +S+ ++ + V C+LDGEM+ +D FG + AK A
Sbjct: 305 RGIDYTYLYGENLLSGTISQYLKFSDSVKECVLDGEMVTFDAIRKVILPFGLVKGSAKEA 364
Query: 327 ---RDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGL 383
D ++D Y FD+LY+ TS+ L +R E L ++ P KG +E +
Sbjct: 365 LSFNDINNNDFHPLYMVFDLLYLNGTSLTPLPLYQRKEYLSSILTPLKGIVEIV------ 418
Query: 384 NSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKP 443
+ C+ + + V+K + I EG+VLK S + R+ W+K+KP
Sbjct: 419 ------RYSRCY-----DAESVKKALEVAISLGSEGVVLKHYNSGYNVASRNNNWIKVKP 467
Query: 444 EYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLV--------------------ALAERPA 482
EY+ G +LD++IIG SG++ + LV + E+P
Sbjct: 468 EYLEEFGENLDLIIIGR--DSGKKDSFILGLLVVDEQETAKTDQEGSPEILNDSSVEQPV 525
Query: 483 --PDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERP 540
P ++ +SFC + G+S EE + K + +++K PPS + + P
Sbjct: 526 KNPKMSVKKVLSFCSIANGISQEEFKEIDRKTRGHWKKTS--GFCPPS--SILEFGSKTP 581
Query: 541 DVWIESPEKSIILSITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFV 597
WIE P +SI+L I S D + ++ +L R+RYDK W DC +
Sbjct: 582 AEWIE-PSESIVLEIKSRSLDNTETNMQKYATNCTLYGGYCRRIRYDKEWTDCYTLDDLY 640
Query: 598 E 598
E
Sbjct: 641 E 641
>gi|336244799|gb|AEI28317.1| ATP-dependent DNA ligase IV, partial [Naja atra]
Length = 351
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/368 (34%), Positives = 206/368 (55%), Gaps = 33/368 (8%)
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQGMISGGLT 125
E+VLA I+ L + KD DA++L+N+R G+ N G+F M+A VL+ R + G LT
Sbjct: 1 ETVLAKLYIELLNLPKDGKDALKLLNFRTPTGSQGNVGDFAMIAYFVLKSR-CINQGQLT 59
Query: 126 IKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
I+++NDLLD ++++ K V L LI +++A E KW+I +I+KDLKLG+S++++F
Sbjct: 60 IQQVNDLLDSISNNNAAKRKDLVKKSLLQLITQSSALEQKWLIRMIIKDLKLGVSQQTLF 119
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
FHPDA +L +VT DL+ VC +L + + I + A +P LA I +++
Sbjct: 120 SVFHPDAAELHSVTTDLEKVCRQLHNPSISLSDASITLFSAFKPMLA-SIASVRQIEKQM 178
Query: 243 HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIEQNVL-VD 295
+ + IE K DG+R+Q+HK+G YFSR+ D++ ++G +++ I Q +
Sbjct: 179 NNQTFYIETKLDGERMQMHKDGDVYKYFSRNGYDYTQQFGASPLEGSLTPFIHQAFRNIQ 238
Query: 296 RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQS 355
CILDGEM+ ++ + F + G +I + D S+ Q C+ FDVL V D + H+
Sbjct: 239 NCILDGEMMAYNPTTQTFMQKGIKFDIKRMVDD---SELQTCFCVFDVLMVNDKKLGHEM 295
Query: 356 LKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN 415
L +R +L + P GR++ + S ++ A+ EV E I+N
Sbjct: 296 LSKRCHILNTIFTPIPGRVQIV-------SRIQ----------ANTQKEVVDALNEAIDN 338
Query: 416 RDEGIVLK 423
R+EGIV+K
Sbjct: 339 REEGIVIK 346
>gi|151945634|gb|EDN63875.1| ATP-dependent DNA ligase [Saccharomyces cerevisiae YJM789]
gi|207341293|gb|EDZ69390.1| YOR005Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273994|gb|EEU08910.1| Dnl4p [Saccharomyces cerevisiae JAY291]
gi|259149489|emb|CAY86293.1| Dnl4p [Saccharomyces cerevisiae EC1118]
Length = 944
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 180/629 (28%), Positives = 295/629 (46%), Gaps = 83/629 (13%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNF 105
+ AL L LP R+R Y +K+ VL + L + K+SA RL +W++ GN
Sbjct: 70 YPALVLALPY--RDRRIYNIKDYVLIRTICSYLKLPKNSATEQRLKDWKQ--RVGKGGNL 125
Query: 106 P-MVAAEVLQRRQGMISGGLTIKELNDLLDRLAS---SENRAEKISVLST----LIKKTN 157
++ E+ +RR S +TI +N LD L+ + R K V S ++ +
Sbjct: 126 SSLLVEEIAKRRAEPSSKAITIDNVNHYLDSLSGDRFASGRGFKSLVKSKPFLHCVENMS 185
Query: 158 AQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD 217
E+K+ I+LK+ +G E + + +HPDA+D +V DLK+V KL D R K D
Sbjct: 186 FVELKYFFDIVLKNRVIGGQEHKLLNCWHPDAQDYLSVISDLKVVTSKLYDPKVRLKDDD 245
Query: 218 --IEVGKAVRPQLAMRIGDAH-AAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSR 272
I+VG A PQLA ++ ++ R LH + ++E K DG+RIQ+H G I +FSR
Sbjct: 246 LSIKVGFAFAPQLAKKVNLSYEKICRTLHD-DFLVEEKMDGERIQVHYMNYGESIKFFSR 304
Query: 273 SFLDHSE-YGHAMSK-IIEQNVL----VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAA 326
+D++ YG ++S I Q++ V C+LDGEM+ +D FG + +A
Sbjct: 305 RGIDYTYLYGASLSSGTISQHLRFTDSVKECVLDGEMVTFDAKRRVILPFGL---VKGSA 361
Query: 327 RDGLS------SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPD 380
++ LS D Y FD+LY+ TS+ L +R + L ++ P K +E +
Sbjct: 362 KEALSFNSINNVDFHPLYMVFDLLYLNGTSLTPLPLHQRKQYLNSILSPLKNIVEIV--- 418
Query: 381 HGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLK 440
+ C+ V+ ++K + I EG+VLK S + R+ W+K
Sbjct: 419 ---------RSSRCYG-----VESIKKSLEVAISLGSEGVVLKYYNSSYNVASRNNNWIK 464
Query: 441 LKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLV-------------------ALAER 480
+KPEY+ G +LD+++IG SG++ + LV + E+
Sbjct: 465 VKPEYLEEFGENLDLIVIGR--DSGKKDSFMLGLLVLDEEEYKKHQGDSSEIVDHSSQEK 522
Query: 481 PAPDTYPR--RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKE 538
++ R + +SFC + G+S EE + K + ++++ + APP+ + +
Sbjct: 523 HIQNSRRRVKKILSFCSIANGISQEEFKEIDRKTRGHWKRTS--EVAPPA--SILEFGSK 578
Query: 539 RPDVWIESPEKSIILSITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQS 595
P WI+ P +SI+L I S D + ++ +L R+RYDK W DC +
Sbjct: 579 IPAEWID-PSESIVLEIKSRSLDNTETNMQKYATNCTLYGGYCKRIRYDKEWTDCYTLND 637
Query: 596 FVE-LVHSSNGTTQKGKEYGGLQDDKPKQ 623
E SN + Q + GL K K+
Sbjct: 638 LYESRTAKSNPSYQAERSQLGLIRKKRKR 666
>gi|349581170|dbj|GAA26328.1| K7_Dnl4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 944
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 180/633 (28%), Positives = 294/633 (46%), Gaps = 91/633 (14%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNF 105
+ AL L LP R+R Y +K+ VL + L + K+SA RL +W++ GN
Sbjct: 70 YPALVLALPY--RDRRIYNIKDYVLIRTICSYLKLPKNSATEQRLKDWKQ--RVGKGGNL 125
Query: 106 P-MVAAEVLQRRQGMISGGLTIKELNDLLDRLAS---SENRAEKISVLST----LIKKTN 157
++ E+ +RR S +TI +N LD L+ + R K V S ++ +
Sbjct: 126 SSLLVEEIAKRRAEPSSKAITIDNVNHYLDSLSGDRFASGRGFKSLVKSEPFLHCVENMS 185
Query: 158 AQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD 217
E+K+ I+LK+ +G E + + +HPDA+D +V DLK+V KL D R K D
Sbjct: 186 FVELKYFFDIVLKNRVIGGQEHKLLNCWHPDAQDYLSVISDLKVVTSKLYDPKIRLKDDD 245
Query: 218 --IEVGKAVRPQLAMRIGDAH-AAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSR 272
I+VG A PQLA ++ ++ R LH + ++E K DG+RIQ+H G I +FSR
Sbjct: 246 LSIKVGFAFAPQLAKKVNLSYEKICRTLHD-DFLVEEKMDGERIQVHYMNYGESIKFFSR 304
Query: 273 SFLDHSE-YGHAMSK-IIEQNVL----VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAA 326
+D++ YG ++S I Q++ V C+LDGEM+ +D FG + +A
Sbjct: 305 RGIDYTYLYGASLSSGTISQHLRFTDSVKECVLDGEMVTFDAKRRVILPFGL---VKGSA 361
Query: 327 RDGLS------SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPD 380
++ LS D Y FD+LY+ TS+ L +R + L ++ P K +E +
Sbjct: 362 KEALSFNSINNVDFHPLYMVFDLLYLNGTSLTPLPLHQRKQYLNSILSPLKNIVEIV--- 418
Query: 381 HGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLK 440
+ C+ V+ ++K + I EG+VLK S + R+ W+K
Sbjct: 419 ---------RSSRCYG-----VESIKKSLEVAISLGSEGVVLKYYNSSYNVASRNNNWIK 464
Query: 441 LKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVAL---------------------- 477
+KPEY+ G +LD+++I GR G+ F++ L
Sbjct: 465 VKPEYLEEFGENLDLIVI------GRDSGKKDSFMLGLLVLDEEEYKKHQGDSSEIVDHS 518
Query: 478 -AERPAPDTYPR--RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN 534
E+ ++ R + +SFC + G+S EE + K + ++++ + APP+ +
Sbjct: 519 SQEKHIQNSRGRVKKILSFCSIANGISQEEFKEIDRKTRGHWKRTS--EVAPPA--SILE 574
Query: 535 NSKERPDVWIESPEKSIILSITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCL 591
+ P WI+ P +SI+L I S D + ++ +L R+RYDK W DC
Sbjct: 575 FGSKIPAEWID-PSESIVLEIKSRSLDNTETNMQKYATNCTLYGGYCKRIRYDKEWTDCY 633
Query: 592 DVQSFVE-LVHSSNGTTQKGKEYGGLQDDKPKQ 623
+ E SN + Q + GL K K+
Sbjct: 634 TLNDLYESRTAKSNPSYQAERSQLGLIRKKRKR 666
>gi|190407346|gb|EDV10613.1| ATP dependent DNA ligase [Saccharomyces cerevisiae RM11-1a]
Length = 944
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 180/629 (28%), Positives = 295/629 (46%), Gaps = 83/629 (13%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNF 105
+ AL L LP R+R Y +K+ VL + L + K+SA RL +W++ GN
Sbjct: 70 YPALVLALPY--RDRRIYNIKDYVLIRTICSYLKLPKNSATEQRLKDWKQ--RVGKGGNL 125
Query: 106 P-MVAAEVLQRRQGMISGGLTIKELNDLLDRLAS---SENRAEKISVLST----LIKKTN 157
++ E+ +RR S +TI +N LD L+ + R K V S ++ +
Sbjct: 126 SSLLVEEIAKRRAEPSSKAITIDNVNHYLDSLSGDRFASGRGFKSLVKSKPFLHCVENMS 185
Query: 158 AQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD 217
E+K+ I+LK+ +G E + + +HPDA+D +V DLK+V KL D R K D
Sbjct: 186 FVELKYFFDIVLKNRVIGGQEHKLLNCWHPDAQDYLSVISDLKVVTSKLYDPKVRLKDDD 245
Query: 218 --IEVGKAVRPQLAMRIGDAH-AAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSR 272
I+VG A PQLA ++ ++ R LH + ++E K DG+RIQ+H G I +FSR
Sbjct: 246 LSIKVGFAFAPQLAKKVNLSYEKICRTLHD-DFLVEEKMDGERIQVHYMNYGESIKFFSR 304
Query: 273 SFLDHSE-YGHAMSK-IIEQNVL----VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAA 326
+D++ YG ++S I Q++ V C+LDGEM+ +D FG + +A
Sbjct: 305 RGIDYTYLYGASLSSGTISQHLRFTDSVKECVLDGEMVTFDAKRRVILPFGL---VKGSA 361
Query: 327 RDGLS------SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPD 380
++ LS D Y FD+LY+ TS+ L +R + L ++ P K +E +
Sbjct: 362 KEALSFNSINNVDFHPLYMVFDLLYLNGTSLTPLPLHQRKQYLNSILSPLKNIVEIV--- 418
Query: 381 HGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLK 440
+ C+ V+ ++K + I EG+VLK S + R+ W+K
Sbjct: 419 ---------RSSRCYG-----VESIKKSLEVAISLGSEGVVLKYYNSSYNVASRNNNWIK 464
Query: 441 LKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLV-------------------ALAER 480
+KPEY+ G +LD+++IG SG++ + LV + E+
Sbjct: 465 VKPEYLEEFGENLDLIVIGR--DSGKKDSFMLGLLVLDEEEYKKHQGDSSEIVDHSSQEK 522
Query: 481 PAPDTYPR--RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKE 538
++ R + +SFC + G+S EE + K + ++++ + APP+ + +
Sbjct: 523 HIQNSRRRVKKILSFCSIANGISQEEFKEIDRKTRGHWKRTS--EVAPPA--SILEFGSK 578
Query: 539 RPDVWIESPEKSIILSITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQS 595
P WI+ P +SI+L I S D + ++ +L R+RYDK W DC +
Sbjct: 579 IPAEWID-PSESIVLEIKSRSLDNTETNMQKYATNCTLYGGYCKRIRYDKEWTDCYTLND 637
Query: 596 FVE-LVHSSNGTTQKGKEYGGLQDDKPKQ 623
E SN + Q + GL K K+
Sbjct: 638 LYESRTAKSNPSYQAERSQLGLIRKKRKR 666
>gi|336244807|gb|AEI28321.1| ATP-dependent DNA ligase IV, partial [Pelodiscus sinensis]
Length = 352
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 127/372 (34%), Positives = 206/372 (55%), Gaps = 38/372 (10%)
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQGMISGGLT 125
E++LA I+ L + K+ +A++L+N+R G+ +AG+F M+A VL+ R G LT
Sbjct: 1 ETMLAKLYIELLNLPKEGKNALKLLNYRTPTGSHGDAGDFAMIAYFVLKPRCPK-QGKLT 59
Query: 126 IKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
I+++N+LL+ +A + K V L LI +++A E KW+I +I+KDLKLG+S+++IF
Sbjct: 60 IEQVNELLNSVAGNNAAKRKDLVKKNLLQLITQSSALEQKWLIRMIIKDLKLGVSQQTIF 119
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
FHPDA +L NVT DL+ VC L D I + A +P LA I + +++
Sbjct: 120 SLFHPDASELHNVTTDLEKVCRLLHDPAVSLSDVSIMLFSAFKPMLA-AIANVKQIEKQM 178
Query: 243 HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGHA---------MSKIIEQNV 292
+ + IE K DG+R+Q+HK+G YFSR+ D++ ++G + + + + N
Sbjct: 179 NNQSFYIETKLDGERMQMHKDGDVYKYFSRNGYDYTQQFGASPLEGSLTPFIHNVFKNN- 237
Query: 293 LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVI 352
+ CILDGEM+ ++ + F + G+ +I + D SD Q C+ FDVL V D +
Sbjct: 238 -IQNCILDGEMMAYNPNTQTFMQKGNKFDIKRMVDD---SDLQTCFCVFDVLLVNDQKLG 293
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
H+ L +R+E+L ++ P GR+ + H + R EV E
Sbjct: 294 HEVLSKRYEILNELFTPMIGRIHIV---HKTQASTRK--------------EVVDALNEA 336
Query: 413 IENRDEGIVLKD 424
I+NR+EGI++KD
Sbjct: 337 IDNREEGIMIKD 348
>gi|336244809|gb|AEI28322.1| ATP-dependent DNA ligase IV, partial [Ichthyophis bannanicus]
Length = 351
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 122/370 (32%), Positives = 209/370 (56%), Gaps = 35/370 (9%)
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRKGGAAP-NAGNFPMVAAEVLQRRQGMISGGLT 125
E++LA I+ LG+ KD DA++L+N++ + + G+F M+A VL++R G LT
Sbjct: 1 ETMLAKLYIEVLGLPKDGKDALKLLNYKAPAVSHGDVGDFAMIAYFVLKQRCPK-EGTLT 59
Query: 126 IKELNDLLDRLASSENRAEKISVLSTLIK---KTNAQEMKWIIMIILKDLKLGISEKSIF 182
I+++ND+LD +A + ++ + +L+K ++ A E KW+I +I+KD++LGIS++++F
Sbjct: 60 IQQVNDILDSVAYNSALKKRDIMKKSLLKLIVQSTALEQKWLIRMIIKDMRLGISQQTVF 119
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
FHPDA +L +VT DL+ VC +L D + I + A +P LA + + +++
Sbjct: 120 SIFHPDAVELHSVTTDLENVCRQLHDLSVSLSDVSIMLFSAFKPMLA-SVANIQHIEKQM 178
Query: 243 HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIEQ--NVLV 294
H + IE K DG+R+Q+HK+G YFSR+ D++ ++G +++ I N V
Sbjct: 179 HNQSFYIETKLDGERMQMHKDGDVYKYFSRNGHDYTQQFGASPLEGSLTPFIHNVFNNDV 238
Query: 295 DRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQ 354
CILDGEM+ ++ + F + GS +I + SD Q CY FD+L + D + +
Sbjct: 239 QNCILDGEMMAYNPNAQTFMQKGSKFDIKRMD----DSDLQTCYCVFDILMLNDQKLARE 294
Query: 355 SLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIE 414
+L +R+E+LQ + P GR+ H+ P+ + A + E I+
Sbjct: 295 TLTKRYEVLQNLFTPVVGRI-----------HIVPKKD------ASTKKNIVDALNEAID 337
Query: 415 NRDEGIVLKD 424
NR+EGI++KD
Sbjct: 338 NREEGIMVKD 347
>gi|6324578|ref|NP_014647.1| DNA ligase (ATP) DNL4 [Saccharomyces cerevisiae S288c]
gi|2494163|sp|Q08387.1|DNLI4_YEAST RecName: Full=DNA ligase 4; AltName: Full=DNA ligase II; AltName:
Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|1420096|emb|CAA99193.1| DNL4 [Saccharomyces cerevisiae]
gi|285814894|tpg|DAA10787.1| TPA: DNA ligase (ATP) DNL4 [Saccharomyces cerevisiae S288c]
Length = 944
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 180/629 (28%), Positives = 295/629 (46%), Gaps = 83/629 (13%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNF 105
+ AL L LP R+R Y +K+ VL + L + K+SA RL +W++ GN
Sbjct: 70 YPALVLALPY--RDRRIYNIKDYVLIRTICSYLKLPKNSATEQRLKDWKQ--RVGKGGNL 125
Query: 106 P-MVAAEVLQRRQGMISGGLTIKELNDLLDRLAS---SENRAEKISVLST----LIKKTN 157
++ E+ +RR S +TI +N LD L+ + R K V S ++ +
Sbjct: 126 SSLLVEEIAKRRAEPSSKAITIDNVNHYLDSLSGDRFASGRGFKSLVKSKPFLHCVENMS 185
Query: 158 AQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD 217
E+K+ I+LK+ +G E + + +HPDA+D +V DLK+V KL D R K D
Sbjct: 186 FVELKYFFDIVLKNRVIGGQEHKLLNCWHPDAQDYLSVISDLKVVTSKLYDPKVRLKDDD 245
Query: 218 --IEVGKAVRPQLAMRIGDAH-AAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSR 272
I+VG A PQLA ++ ++ R LH + ++E K DG+RIQ+H G I +FSR
Sbjct: 246 LSIKVGFAFAPQLAKKVNLSYEKICRTLHD-DFLVEEKMDGERIQVHYMNYGESIKFFSR 304
Query: 273 SFLDHSE-YGHAMSK-IIEQNVL----VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAA 326
+D++ YG ++S I Q++ V C+LDGEM+ +D FG + +A
Sbjct: 305 RGIDYTYLYGASLSSGTISQHLRFTDSVKECVLDGEMVTFDAKRRVILPFGL---VKGSA 361
Query: 327 RDGLS------SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPD 380
++ LS D Y FD+LY+ TS+ L +R + L ++ P K +E +
Sbjct: 362 KEALSFNSINNVDFHPLYMVFDLLYLNGTSLTPLPLHQRKQYLNSILSPLKNIVEIV--- 418
Query: 381 HGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLK 440
+ C+ V+ ++K + I EG+VLK S + R+ W+K
Sbjct: 419 ---------RSSRCYG-----VESIKKSLEVAISLGSEGVVLKYYNSSYNVASRNNNWIK 464
Query: 441 LKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLV-------------------ALAER 480
+KPEY+ G +LD+++IG SG++ + LV + E+
Sbjct: 465 VKPEYLEEFGENLDLIVIGR--DSGKKDSFMLGLLVLDEEEYKKHQGDSSEIVDHSSQEK 522
Query: 481 PAPDTYPR--RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKE 538
++ R + +SFC + G+S EE + K + ++++ + APP+ + +
Sbjct: 523 HIQNSRRRVKKILSFCSIANGISQEEFKEIDRKTRGHWKRTS--EVAPPA--SILEFGSK 578
Query: 539 RPDVWIESPEKSIILSITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQS 595
P WI+ P +SI+L I S D + ++ +L R+RYDK W DC +
Sbjct: 579 IPAEWID-PSESIVLEIKSRSLDNTETNMQKYATNCTLYGGYCKRIRYDKEWTDCYTLND 637
Query: 596 FVE-LVHSSNGTTQKGKEYGGLQDDKPKQ 623
E SN + Q + GL K K+
Sbjct: 638 LYESRTVKSNPSYQAERSQLGLIRKKRKR 666
>gi|448118290|ref|XP_004203459.1| Piso0_001068 [Millerozyma farinosa CBS 7064]
gi|448120701|ref|XP_004204042.1| Piso0_001068 [Millerozyma farinosa CBS 7064]
gi|359384327|emb|CCE79031.1| Piso0_001068 [Millerozyma farinosa CBS 7064]
gi|359384910|emb|CCE78445.1| Piso0_001068 [Millerozyma farinosa CBS 7064]
Length = 940
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 174/680 (25%), Positives = 315/680 (46%), Gaps = 92/680 (13%)
Query: 25 AAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSK 82
AKK +F+ + V D + A RLI P +R+R Y +++ LA +I L + K
Sbjct: 45 TAKKNYIIEQFIKEWRQFVGPDIYPAARLIFP--NRDRRLYFIRDLNLARIIIKILQIPK 102
Query: 83 DSADAVRLINWRKGGAAPNAGN---------FPMVAAEVLQRRQG---MISGGLTIKELN 130
S+D +L+++++ N P++ + ++ R+ ++ +TI ++N
Sbjct: 103 KSSDHDKLLHYKEHYHQFRQLNRYGQKQLRSLPLIISHIVAERRDPSYVVKPSITISKIN 162
Query: 131 DLLDRLASSE--NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPD 188
++LD+L+ E N ++ +L ++ + +E++W M+ILK LG E F +HPD
Sbjct: 163 EVLDKLSQPESTNVKAQVEILKPVVNQLTIEEVRWFFMVILKQSILGRFEVVFFKMWHPD 222
Query: 189 AEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGK--AVRPQLAMRIGDAHAAWRKLHGKE 246
A L+NV L V L D R + ++V PQL+ ++ +++A +
Sbjct: 223 APRLYNVCSSLPKVLWLLHDPEYRLNEEQLKVQPMYPFPPQLSQKLSISYSALCANMNHD 282
Query: 247 VVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIEQ--NVLVDRCI 298
++E K DGDR+ +H + +FSR D+S YG +++K + + V I
Sbjct: 283 FIVEEKMDGDRMILHMEDKKFKFFSRRIRDYSLLYGTNLQIGSLTKYLGDAFHPKVRSII 342
Query: 299 LDGEMLVWDTSLNRFAEFGS--NQEIAKAARDGLSSD------RQLCYFAFDVLYVGDTS 350
LDGEM+ WD N FG+ + I +A R ++D +F FD+L++
Sbjct: 343 LDGEMVAWDFKRNVILPFGTLKSAAIQEAVRQFTTTDIFAMQSSYPLFFIFDILHLNGKD 402
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
+ +L +R LL +++ P + E L S+ R + D+++ K
Sbjct: 403 LTEYALADRKSLLHQLINPVPHKFEIL-------SYRR----------CKDPDDIQNAIK 445
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGE 469
E I +R+EGI++K+ S++ R W+K+KPEY+ G ++D+ +IG G
Sbjct: 446 EVISDRNEGIMVKNAASRYHVATRHNCWIKVKPEYLEEFGENVDLAVIGIIPGIKN---- 501
Query: 470 VAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSF 529
++ L + F SFC VG G S E + + + ++ + PPS
Sbjct: 502 --AYMCGLRDYNDNGC----FRSFCTVGNGFSSYEYSQIQRITEGKWHNFQ---KDPPSS 552
Query: 530 YQVTNNSKERPDVWIESPEKSIILSITS-DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWH 588
+ + ++ +P WI+ P+ S++L I + I +E +S +L +R DK +
Sbjct: 553 HLLKFGTR-KPVSWID-PKDSVVLEIKARSIDNNHTETYSVGTTLHNLYCRSIRKDKSYD 610
Query: 589 DCLDVQSFVELVHSSNGTTQK----GKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQ 644
+CL + ++EL TT K ++ L D +QF+ S K K++V
Sbjct: 611 ECLTLDEYLELKQKYASTTNKEQTVARKRKRLLDSFEQQFKKS-KLRKRDV--------- 660
Query: 645 TDVSDIKGETSIFSDMVFCI 664
+T++F D VF +
Sbjct: 661 --------KTALFKDYVFLV 672
>gi|392296338|gb|EIW07440.1| Dnl4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 944
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 180/633 (28%), Positives = 293/633 (46%), Gaps = 91/633 (14%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNF 105
+ AL L LP R+R Y +K+ VL + L + K+SA RL +W++ GN
Sbjct: 70 YPALVLALPY--RDRRIYNIKDYVLIRTICSYLKLPKNSATEQRLKDWKQ--RVGKGGNL 125
Query: 106 P-MVAAEVLQRRQGMISGGLTIKELNDLLDRLAS---SENRAEKISVLST----LIKKTN 157
++ E+ +RR S +TI +N LD L+ + R K V S ++ +
Sbjct: 126 SSLLVEEIAKRRAEPSSKAITIDNVNHYLDSLSGDRFASGRGFKSLVKSEPFLHCVENMS 185
Query: 158 AQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD 217
E+K+ I+LK+ +G E + + +HPDA+D +V DLK V KL D R K D
Sbjct: 186 FVELKYFFDIVLKNRVIGGQEHKLLNCWHPDAQDYLSVISDLKAVTSKLYDPKIRLKDDD 245
Query: 218 --IEVGKAVRPQLAMRIGDAH-AAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSR 272
I+VG A PQLA ++ ++ R LH + ++E K DG+RIQ+H G I +FSR
Sbjct: 246 LSIKVGFAFAPQLAKKVNLSYEKICRTLHD-DFLVEEKMDGERIQVHYMNYGESIKFFSR 304
Query: 273 SFLDHSE-YGHAMSK-IIEQNVL----VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAA 326
+D++ YG ++S I Q++ V C+LDGEM+ +D FG + +A
Sbjct: 305 RGIDYTYLYGASLSSGTISQHLRFTDSVKECVLDGEMVTFDAKRRVILPFGL---VKGSA 361
Query: 327 RDGLS------SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPD 380
++ LS D Y FD+LY+ TS+ L +R + L ++ P K +E +
Sbjct: 362 KEALSFNSINNVDFHPLYMVFDLLYLNGTSLTPLPLHQRKQYLNSILSPLKNIVEIV--- 418
Query: 381 HGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLK 440
+ C+ V+ ++K + I EG+VLK S + R+ W+K
Sbjct: 419 ---------RSSRCYG-----VESIKKSLEVAISLGSEGVVLKYYNSSYNVASRNNNWIK 464
Query: 441 LKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVAL---------------------- 477
+KPEY+ G +LD+++I GR G+ F++ L
Sbjct: 465 VKPEYLEEFGENLDLIVI------GRDSGKKDSFMLGLLVLDEEEYKKHQGDSSEIVDHS 518
Query: 478 -AERPAPDTYPR--RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN 534
E+ ++ R + +SFC + G+S EE + K + ++++ + APP+ +
Sbjct: 519 SQEKHIQNSRRRVKKILSFCSIANGISQEEFKEIDRKTRGHWKRTS--EVAPPA--SILE 574
Query: 535 NSKERPDVWIESPEKSIILSITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCL 591
+ P WI+ P +SI+L I S D + ++ +L R+RYDK W DC
Sbjct: 575 FGSKIPAEWID-PSESIVLEIKSRSLDNTETNMQKYATNCTLYGGYCKRIRYDKEWTDCY 633
Query: 592 DVQSFVE-LVHSSNGTTQKGKEYGGLQDDKPKQ 623
+ E SN + Q + GL K K+
Sbjct: 634 TLNDLYESRTAKSNPSYQAERSQLGLIRKKRKR 666
>gi|336244787|gb|AEI28311.1| ATP-dependent DNA ligase IV, partial [Podocnemis unifilis]
Length = 352
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/371 (35%), Positives = 208/371 (56%), Gaps = 36/371 (9%)
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQGMISGGLT 125
E++LA I+ L + K+ DA++L+N+R G+ +AG+F M+A VL R G LT
Sbjct: 1 ETMLAKLYIELLNLPKEGKDALKLLNYRTPTGSHGDAGDFAMIAYFVLTPRCPK-QGSLT 59
Query: 126 IKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
I+++N+ LD +AS+ K V L LI +++A E KW+I +I+KDLKLG+S+++IF
Sbjct: 60 IQQVNEHLDSIASNNAAKRKDLVKKSLLQLITQSSALEQKWLIRMIIKDLKLGVSQQTIF 119
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
HPDA +L +VT DL+ VC +L D + I + A +P LA I + +++
Sbjct: 120 SLSHPDAAELHSVTTDLEKVCRQLHDPSVSLSDVSIMLFSAFKPMLA-AIANVQQIEKQM 178
Query: 243 HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIEQNVL--- 293
+ + IE K DG+R+Q+HK+G YFSR+ D++ ++G +++ I NV
Sbjct: 179 NHQSFYIETKLDGERMQMHKDGDVYKYFSRNGFDYTQQFGASPLEGSLTPFI-HNVFKNS 237
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIH 353
V CILDGEM+ ++ S F + G+ +I + + SD Q C+ FDVL V D + H
Sbjct: 238 VQNCILDGEMMAYNPSTQTFMQKGNKFDIKRMVEE---SDLQTCFCVFDVLMVNDEKLGH 294
Query: 354 QSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETI 413
+ L++R E+L ++ P GR+ HV + + A EV E I
Sbjct: 295 EILRKRDEILNELFTPIPGRI-----------HVVQKTQ------ASTRKEVVDALNEAI 337
Query: 414 ENRDEGIVLKD 424
+NR+EGI++KD
Sbjct: 338 DNREEGIMVKD 348
>gi|448513145|ref|XP_003866875.1| Lig4 DNA ligase [Candida orthopsilosis Co 90-125]
gi|380351213|emb|CCG21436.1| Lig4 DNA ligase [Candida orthopsilosis Co 90-125]
Length = 941
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 179/700 (25%), Positives = 317/700 (45%), Gaps = 97/700 (13%)
Query: 19 IQKTKPAAKKRSKF-RKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLI 75
+Q+ ++R++ F+ T+ + D + LI P ++ Y +KE VLA +I
Sbjct: 39 LQEASTITERRAQIINDFISTFRTHIGNDMLQSANLIFP--EKTSRLYVIKEVVLARLII 96
Query: 76 DALGMSKDSADAVRLINWRKGGAAPN--------AGNFPMVAAEVLQRRQGMIS--GGLT 125
+SKD+ + L W + + P+ +A ++ R+ +
Sbjct: 97 KMYKISKDTEEYNLLHYWNRQYQKSKRFAVDERKIRDLPLQSARIIATRRPFVERCKEYN 156
Query: 126 IKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEF 185
+ ++N +LD L ++ E + +L L +E++W+I ILK L EK F+ +
Sbjct: 157 VPQINSILDDLTMAKQSQEHLEILQPLFDNLRIEEIRWLIHFILKKPILIHMEKYFFNSW 216
Query: 186 HPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ--DIEVGKAVRPQLAMRIG-DAHAAWRKL 242
HPD L+++ +L+ L D N+R R+ I+ +PQLA+++ + +A RKL
Sbjct: 217 HPDGYRLYSICNNLETTFNLLSDPNRRLAREYLGIQPRYKFKPQLAVKLNSNYNAVVRKL 276
Query: 243 HGKE------------------VVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH- 282
K+ IE K DGDR+ +HK G+ +FSR D+S YG
Sbjct: 277 QKKQPMGPQYEQKFTQLELEDKFYIEEKMDGDRMLLHKEGNRFKFFSRRLKDYSFLYGES 336
Query: 283 ----AMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGS--NQEIAKAARDGLSSDR 334
+++K I +D +LDGEM+ +D FG+ + I ++ R + D
Sbjct: 337 FQFGSLTKYIRDAFANNIDSIVLDGEMVAYDYKRQAILPFGTLKSSAIQESVRQFTTIDH 396
Query: 335 ------QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVR 388
Y FD+LY+ + + L R LL++++KP R E L D L S
Sbjct: 397 YEQQTSYPYYLIFDILYLNGRDLSNYPLFFRKNLLERIIKPVPNRFEVL--DARLGS--- 451
Query: 389 PQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWE-PGDRSGKWLKLKPEYI- 446
+V +VEK +E + R EG+VLK S++ G R+ W+K+KP+Y+
Sbjct: 452 ------------SVVDVEKAVREVVTKRSEGLVLKHTQSRYVIDGFRNPNWIKVKPDYLE 499
Query: 447 RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 506
+ G +LD+++I G+ G +++ L + Y + SFC G EE D
Sbjct: 500 KFGENLDLVVI------GKNPGVKNSYMMGLINKQEGSEYYGSYYSFCMCANGFGIEEFD 553
Query: 507 AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSE- 565
+ + + R ++ PP Q+ +++PD WI+ P+ S++L I + +R E
Sbjct: 554 KI--ERLTHGRWINTAQKMPPE--QLIKFGRKKPDFWID-PKYSLVLEIRARSIDVRPEA 608
Query: 566 VFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFR 625
F+ +L R+R DK +C+ +Q + EL + +QD K
Sbjct: 609 TFAVGTTLHNMHCRRIREDKSIGECISMQEYFELKQNY------------MQDLNLKPQA 656
Query: 626 SSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
++ K KK ++ + S +++ +K E+ +F+ F IL
Sbjct: 657 TTIK--KKELTKLTSFNEPSNLKKVKIESDLFASFEFLIL 694
>gi|336244783|gb|AEI28309.1| ATP-dependent DNA ligase IV, partial [Struthio camelus]
Length = 352
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 205/373 (54%), Gaps = 40/373 (10%)
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQGMISGGLT 125
E++L I+ L + KD DA +L+++R G+ +AG+F M+A VL+ R G LT
Sbjct: 1 ETMLEKLYIELLNLPKDGKDAAKLLHYRTPAGSRGDAGDFAMIAYFVLKPRCPK-QGRLT 59
Query: 126 IKELNDLLDRLASSENRAE----KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSI 181
I+++N+LLD +A++ K S+L LI +++A E KW+I +I+KDLKLG+S+++I
Sbjct: 60 IEQVNELLDAIANNNAAKNKGLLKKSLLQ-LITQSSALEQKWLIRMIIKDLKLGVSQQTI 118
Query: 182 FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRK 241
F FHPDA +L+NVT DL+ VC +L D I + A +P LA I D ++
Sbjct: 119 FSIFHPDAAELYNVTTDLEKVCRQLHDPTVSLSDVSIMLFSAFKPMLA-AIADVQQIEKQ 177
Query: 242 LHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGHA---------MSKIIEQN 291
++ IE K DG+R+Q+HK+G YFSR+ D++ ++G + + K + N
Sbjct: 178 MNNHIFYIETKLDGERMQMHKDGDVYKYFSRNGYDYTQQFGSSPLEGSLTPFIHKAFKNN 237
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
V CILDGEM+ ++ F + G+ +I + + SD Q CY FDVL + D +
Sbjct: 238 --VQNCILDGEMMAYNPETQTFMQKGNKFDIKRMVEE---SDLQTCYCVFDVLMLNDQKL 292
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
H++L +R+E+L V P GR+ + H ++ R EV
Sbjct: 293 GHEALSKRYEILSDVFTPVTGRMHAV---HKTSARTR--------------KEVIDALNF 335
Query: 412 TIENRDEGIVLKD 424
I+NR+EGI +KD
Sbjct: 336 AIDNREEGIPVKD 348
>gi|361132047|gb|EHL03662.1| putative DNA ligase 4 [Glarea lozoyensis 74030]
Length = 906
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 167/611 (27%), Positives = 280/611 (45%), Gaps = 116/611 (18%)
Query: 28 KRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSA 85
+RS +F+ + V D++ ALRLILP DR+R YGLKE + ++ L ++K S
Sbjct: 58 RRSIIERFISKWRTVVGNDFYPALRLILPEKDRDRLMYGLKEKAIGKIVVRMLSIAKGSD 117
Query: 86 DAVRLINWR---KGGAAPNAGNFPMVAAEVLQRRQGMISG--GLTIKELNDLLDRLASSE 140
DA ++NW+ K + AG+F E+L+ R MI+G + I E+N+LLD L+
Sbjct: 118 DASDVLNWKLPAKNASTQMAGDFAGRCYELLKGR-AMINGKGDMRIAEVNELLDDLSKEG 176
Query: 141 NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLK 200
++ + + +A E+ W+I IIL+ +K+G SEK+I +HP+AE LFNV L+
Sbjct: 177 KEDAQLKIFDKFYHRMSADELMWLIRIILRQMKIGASEKTILELWHPNAEALFNVCSSLR 236
Query: 201 LVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVV--------IE 250
VC +L D +D +E+ +PQLA ++K+ K + IE
Sbjct: 237 RVCWELTDPESILDSEDTGVELMACFQPQLAQF---QQHNFQKMVDKMGMPAENPAFWIE 293
Query: 251 CKFDGDRIQI-------HKNGSEIHYFSRSFLDHSE-YG-------HAMSKIIEQ--NVL 293
K DG+R+Q+ H G ++SR D++ YG A+++ I+ +
Sbjct: 294 EKLDGERMQMHMVVDDSHPGGKRFGFWSRKGKDYTYLYGDGYEDDNSALTRHIKNAFDPR 353
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG--LSSDRQLCYFAFDVLYVGDTSV 351
+ ILDGEM+ WD +++ FG+ + A + + +S ++ + FD LY+ D +
Sbjct: 354 LRNIILDGEMITWDPDIDKIVAFGTLKTAALSEQKNPFQTSGQRPLFRVFDCLYLNDRDI 413
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+L++R + L+KV+ R+E L+ + Q +E ++
Sbjct: 414 TRYTLRDRRKALEKVLTDVYRRIE-------LHHYEEVQ----------EAQAIEPALRQ 456
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVA 471
+ EG+VLK+ S P +RA
Sbjct: 457 VVAEASEGLVLKNPES---------------PYRLRAN---------------------- 479
Query: 472 QFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS-FY 530
P + SFC+VG G E+ A+ + + ++ + PP+ F
Sbjct: 480 ---------------PMKCFSFCKVGGGFRAEDYAAI--RHLTGGKWVDWNRDNPPNEFI 522
Query: 531 QVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWH 588
++ + ERPD+WI+ P S++L + + SE F Y+LRFPR ++R DK W
Sbjct: 523 ELAGGDRQLERPDMWIK-PSDSVVLEVKA-ASVGPSESFKTNYTLRFPRFKKLREDKDWQ 580
Query: 589 DCLDVQSFVEL 599
L + F L
Sbjct: 581 SALSLSEFALL 591
>gi|50286753|ref|XP_445806.1| hypothetical protein [Candida glabrata CBS 138]
gi|74610567|sp|Q6FVD8.1|DNLI4_CANGA RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|49525112|emb|CAG58725.1| unnamed protein product [Candida glabrata]
Length = 946
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 187/663 (28%), Positives = 323/663 (48%), Gaps = 86/663 (12%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGN 104
+ ALRLILP R+R + +K+ L + L + KDS+ +LINW++ G +
Sbjct: 82 YPALRLILPY--RDRRVFNIKDYTLIKAICAFLKLPKDSSTEKKLINWKQDAGRSVRLSK 139
Query: 105 FPMVAAEVLQRR---QGMISGGLTIKELNDLLDRLA--------SSENRAEKISVLSTLI 153
F E+ +RR Q + +TI +LN LD+LA S +N A +++ +
Sbjct: 140 F--CVEEIKKRRSEPQIDRNERITIDDLNGYLDQLAIERTEQGRSFKNLANS-DIMNKCL 196
Query: 154 KKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRH 213
EM++ I+LK+ LG E + + +HPDA+D +V DL+ V ++L D +QR
Sbjct: 197 TSMTFLEMQYFFDILLKNRPLGGHEHKLLNCWHPDAQDYLSVVSDLETVAKRLWDPSQRL 256
Query: 214 KRQD--IEVGKAVRPQLAMRIGDAHAAWRKLH---GKEVVIECKFDGDRIQIHKN--GSE 266
QD I +G A PQLA ++ H +++K+ G + IE K DG+RIQ+H GS+
Sbjct: 257 GNQDLKINIGLAFAPQLATKL---HVSYQKIGEKLGWDFFIEEKMDGERIQMHYTNFGSD 313
Query: 267 IHYFSRSFLDHSE-YGH-----AMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQ 320
I ++SR D++ YG+ ++ I N V C+LD E++ +D++ FG +
Sbjct: 314 IKFYSRRATDYTYLYGNNLKTGTLANFINLNKNVKDCVLDCEVVTFDSNNKIVLPFGMVK 373
Query: 321 EIAK--AARDGLSSDR-QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETL 377
AK ++DG+ + FDVLY+ +++ +R E L++++ P+ R+E +
Sbjct: 374 SSAKNMLSQDGIDTQGFHPLLMVFDVLYLNGATLVDLPYYKRREYLKQILTPTAHRIEII 433
Query: 378 VPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK 437
S+ A++ ++K ++ + EGI+LK S++ RS
Sbjct: 434 K-----------------SIRANDEQMIKKSLEKALSVGSEGIILKRYDSRYVIASRSDD 476
Query: 438 WLKLKPEYI-RAGSDLDVLIIG---GYYGSGRRG----GEVAQFLVALAERPAPDTYPRR 489
W+K+KPEY+ + G ++D++++G S G EV Q + + + +R
Sbjct: 477 WIKIKPEYLEQFGENMDLVLMGRDPSKKDSLMLGLLDYEEVIQDSPIMVNSQSSEENSQR 536
Query: 490 ---FISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES 546
F+S C + G+S+EE + K K + E + PP Y + + P WI+
Sbjct: 537 FRGFVSLCIIANGISNEEYKEIDRKTKGLWNDSE---KIPPLEYMKFGS--KVPRQWID- 590
Query: 547 PEKSIILSITS-DIRTIRSE--VFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSS 603
P+KS+IL I + + RS F+A +L ++R DK W C +Q F E S
Sbjct: 591 PKKSLILEIKARSLDNTRSSERKFAAGCTLFGGYCRQIREDKNWKTCYTLQEF-ERAKSG 649
Query: 604 NGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPS-HFLQTDVSDIKGETSIFSDMVF 662
N ++G KP++ S +K+ +I+ S + D ++++ + IF M F
Sbjct: 650 NNWRKRGSS-------KPQKVIS----KKRRYNIISSVNKALEDFAELEHRSDIFDGMYF 698
Query: 663 CIL 665
+L
Sbjct: 699 YVL 701
>gi|336244785|gb|AEI28310.1| ATP-dependent DNA ligase IV, partial [Pelophylax nigromaculatus]
Length = 352
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/371 (33%), Positives = 207/371 (55%), Gaps = 36/371 (9%)
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQGMISGGLT 125
E++LA LG+ K+ DA++L+N+R G+ +AG+F +A VL+ R G LT
Sbjct: 1 ETMLAKLYTKVLGLPKEGKDALQLLNYRTPTGSNSDAGDFAAIAYFVLKSR-CRKDGNLT 59
Query: 126 IKELNDLLDRLASSENRAEKISVLST----LIKKTNAQEMKWIIMIILKDLKLGISEKSI 181
I+++ND LD +AS+ N A K ++ LI T+A E KW+I +I+KD+KLG S++++
Sbjct: 60 IRDVNDQLDAIASN-NAARKKELIEKSLLHLIANTSALEQKWLIRMIIKDMKLGFSQQTV 118
Query: 182 FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRK 241
F FH DA +L NVT DL+ VC +L D + I + A +P LA I + ++
Sbjct: 119 FSIFHRDAAELHNVTTDLEKVCIQLHDPSVCLSDVSISMFSAFKPMLA-AIANIQQIEKQ 177
Query: 242 LHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYG-----HAMSKIIEQNVLVD 295
++ + IE K DG+R+Q+HK+G YFSR+ D++ ++G +++ I +D
Sbjct: 178 MNHQSFYIETKLDGERMQLHKDGDVYKYFSRNGFDYTQQFGGSPLEGSLTPFIHNVFCMD 237
Query: 296 --RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIH 353
CILDGEM+ ++ + F + GS +I + D SD Q CY FD+L + + H
Sbjct: 238 LQNCILDGEMMAYNPNTKAFMQKGSKFDIKRMVDD---SDLQTCYCVFDILMFNNQKLAH 294
Query: 354 QSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETI 413
++L++R+++L ++ P GR+ H+ + + A EV E I
Sbjct: 295 ETLRKRYDILHEIFTPITGRI-----------HIVQKKD------ATTKKEVVDALNEAI 337
Query: 414 ENRDEGIVLKD 424
+NR+EGI++KD
Sbjct: 338 DNREEGIMVKD 348
>gi|254580003|ref|XP_002495987.1| ZYRO0C07854p [Zygosaccharomyces rouxii]
gi|238938878|emb|CAR27054.1| ZYRO0C07854p [Zygosaccharomyces rouxii]
Length = 944
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 184/666 (27%), Positives = 296/666 (44%), Gaps = 88/666 (13%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINW-RKGGAAPNAGN 104
+ AL LILP R+R + +K+ L + L + +S RL+ W R+ G +
Sbjct: 71 YPALILILPY--RDRRIFNIKDYTLIKAICSFLRLPANSVTEKRLLRWKRRAGRGIKLSD 128
Query: 105 FPMVAAEVLQRRQGMISGG-LTIKELNDLLDRLASSENRAEK-------ISVLSTLIKKT 156
F E+ +RR ++G +TI +LN+ LD+LA N + SV ++
Sbjct: 129 F--CVEEIRRRRSEPLNGERITIDKLNECLDQLAEERNTKGRGFKSLADSSVFKYCLENM 186
Query: 157 NAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ 216
+ EMK+ IILK +G E + +HPDA D +V DLK V +KL D + R K
Sbjct: 187 SFTEMKYYFDIILKSRVIGGQEHKFLNCWHPDARDYLSVVSDLKTVADKLWDPSHRLKND 246
Query: 217 DIEV--GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSR 272
D+ V G P LA R+ ++ + IE K DG+RIQ+H G ++ +FSR
Sbjct: 247 DLGVNLGLPFAPFLAKRLYISYDKVALRLKSDFYIEEKMDGERIQLHYMDYGRKLKWFSR 306
Query: 273 SFLDHSE-YGH-----AMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAA 326
D++ YG ++K ++ + V C+LDGEM+ +DT N FG + +A
Sbjct: 307 RGNDYTYLYGEDIGTGTVAKYLQLDPKVRECVLDGEMISFDTEENSVLPFGL---VKSSA 363
Query: 327 RDGLSSDRQLC------YFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPD 380
RD L+++ L Y D LY+ S+I+ L R + L ++ P +E +
Sbjct: 364 RDSLTAEGILTQGYRPLYMVIDFLYLNGVSLINVPLNTRKQYLSAILNPCPHAVEIIQSM 423
Query: 381 HGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLK 440
H ++ ++ ++ I EGI+LK SK+E G R+ W+K
Sbjct: 424 H-----------------CYDDTSIKSSLEKAIMMGSEGIILKHFKSKYEIGARTDNWIK 466
Query: 441 LKPEYI-RAGSDLDVLIIGG--------------YYGSGRRGGEVAQFLVAL--AERPAP 483
+KPEY+ + G +LD+L+IG G G + + +V L E P
Sbjct: 467 IKPEYLEQFGENLDLLVIGRDPGKKDSLMCGLAVLEGDEEPGAQSDKQVVNLDSEEEEEP 526
Query: 484 DTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVW 543
++FISFC + G+S EE + K ++ E K PP ++ + P+ W
Sbjct: 527 RKAVKKFISFCTIANGISQEEFKQIERKTAGKWKNTEDHK--PP---KILEFGSKLPEEW 581
Query: 544 IESPEKSIILSITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELV 600
I PE S++L + + D F +L R+R DK W +C + EL
Sbjct: 582 I-YPEDSVVLEVKARSLDNTESSGRKFKVGCTLHGGYCRRIREDKNWTECY---TLYELW 637
Query: 601 HSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGET-SIFSD 659
++ + K K+ R R + S QT D + +T SIF
Sbjct: 638 QERRKKVPLSEDSNNQKPMKSKKIRRPR---------IVSRLNQTLSCDDEAKTSSIFDG 688
Query: 660 MVFCIL 665
++F ++
Sbjct: 689 LIFYVI 694
>gi|374106617|gb|AEY95526.1| FACR008Wp [Ashbya gossypii FDAG1]
Length = 981
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 166/604 (27%), Positives = 276/604 (45%), Gaps = 83/604 (13%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAG 103
D + AL L LP DR SY +K+ L L + + ++S RL++W++ AP
Sbjct: 107 DIYPALVLSLPYNDRR--SYRVKDVTLVKALCKHMKLPRNSETERRLLHWKQN--APRGV 162
Query: 104 NFPMVAAEVLQ--RRQGMISGGLTIKELNDLLDRLASSEN--RAEKISV-----LSTLIK 154
E LQ RR+ ++ ++I E+N +LD+L N + IS+ + ++
Sbjct: 163 KLSTFCVEELQKRRREPVVPKRMSIDEVNGMLDKLEHESNVGKWSYISLAESPAFNYCLE 222
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHK 214
+ E+++ IILK + E + +HPDAE F V DL++V L D N+R +
Sbjct: 223 HMSYVELRFFFDIILKVPIVSGLESLLLSCWHPDAESYFKVVSDLRIVAHTLYDPNERLE 282
Query: 215 RQDIEV--GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYF 270
+ D+ V G A P +A R+ + G + +E K DGDRIQ+H G+ I YF
Sbjct: 283 KNDLSVRIGYAFAPHMAQRVKIPYEKVSTKLGNDFYVEEKMDGDRIQVHYMDYGNSIAYF 342
Query: 271 SRSFLDHSE-YGHAMSKIIEQNVL-----VDRCILDGEMLVWDTSLNRFAEF-----GSN 319
SR+ ++++ YG SK N L V CILDGEM+ +D + F G++
Sbjct: 343 SRNGINYTYLYGENSSKGSISNHLKFVEGVKECILDGEMVSYDKEMQCILPFGLTKSGAS 402
Query: 320 QEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVP 379
++ + Y FD+LY+ + +Q + +R E L+K++ PSK + L
Sbjct: 403 HQVNFETTGHTEPTYRPLYAVFDLLYLNGQLLTNQDVVKRKEYLEKILIPSKNVVHLL-- 460
Query: 380 DHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWL 439
G C + + + + + EGIVLK SK+ G R W+
Sbjct: 461 ----------SGPRC-----SDAEAITAALGAAVAHGSEGIVLKKARSKYSVGKRDDSWI 505
Query: 440 KLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALA-----ERPAPD--------- 484
K+KPEY+ G ++D+++I GR G F+ ALA E+ P
Sbjct: 506 KIKPEYLENFGENMDLVVI------GRDKGRKDSFICALAVTDDSEKINPSSYESGSDSD 559
Query: 485 -------TYPR--RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNN 535
P+ +FISFC + G+S+EE + + + + Y +R PP+ +
Sbjct: 560 SDSEPIIVQPKIEKFISFCSIANGISNEEFKEIDRLTRGNW--FPYDERKPPTDW--VEF 615
Query: 536 SKERPDVWIESPEKSIILSITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLD 592
+ P WI+ P+ S++L + + D +S+++ +L R+R+DK W
Sbjct: 616 GTKTPREWID-PKNSVVLEVKARSIDNEESKSDLYKTGSTLYNAYCKRIRHDKNWSTAST 674
Query: 593 VQSF 596
V +
Sbjct: 675 VAEY 678
>gi|45185695|ref|NP_983411.1| ACR008Wp [Ashbya gossypii ATCC 10895]
gi|74694987|sp|Q75CA4.1|DNLI4_ASHGO RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|44981450|gb|AAS51235.1| ACR008Wp [Ashbya gossypii ATCC 10895]
Length = 981
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 165/604 (27%), Positives = 276/604 (45%), Gaps = 83/604 (13%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAG 103
D + AL L LP DR SY +K+ L L + + ++S RL++W++ AP
Sbjct: 107 DIYPALVLSLPYNDRR--SYRVKDVTLVKALCKHMKLPRNSETERRLLHWKQN--APRGV 162
Query: 104 NFPMVAAEVLQ--RRQGMISGGLTIKELNDLLDRLASSEN--RAEKISV-----LSTLIK 154
E LQ RR+ ++ ++I E+N +LD+L N + IS+ + ++
Sbjct: 163 KLSTFCVEELQKRRREPVVPKRMSIDEVNGMLDKLEHESNVGKWSYISLAESPAFNYCLE 222
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHK 214
+ E+++ I+LK + E + +HPDAE F V DL++V L D N+R +
Sbjct: 223 HMSYVELRFFFDIVLKVPIVSGLESLLLSCWHPDAESYFKVVSDLRIVAHTLYDPNERLE 282
Query: 215 RQDIEV--GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYF 270
+ D+ V G A P +A R+ + G + +E K DGDRIQ+H G+ I YF
Sbjct: 283 KNDLSVRIGYAFAPHMAQRVKIPYEKVSTKLGNDFYVEEKMDGDRIQVHYMDYGNSIAYF 342
Query: 271 SRSFLDHSE-YGHAMSKIIEQNVL-----VDRCILDGEMLVWDTSLNRFAEF-----GSN 319
SR+ ++++ YG SK N L V CILDGEM+ +D + F G++
Sbjct: 343 SRNGINYTYLYGENSSKGSISNHLKFVEGVKECILDGEMVSYDKEMQCILPFGLTKSGAS 402
Query: 320 QEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVP 379
++ + Y FD+LY+ + +Q + +R E L+K++ PSK + L
Sbjct: 403 HQVNFETTGHTEPTYRPLYAVFDLLYLNGQLLTNQDVVKRKEYLEKILIPSKNVVHLL-- 460
Query: 380 DHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWL 439
G C + + + + + EGIVLK SK+ G R W+
Sbjct: 461 ----------SGPRC-----SDAEAITAALGAAVAHGSEGIVLKKARSKYSVGKRDDSWI 505
Query: 440 KLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALA-----ERPAPD--------- 484
K+KPEY+ G ++D+++I GR G F+ ALA E+ P
Sbjct: 506 KIKPEYLENFGENMDLVVI------GRDKGRKDSFICALAVTDDSEKNNPSSYESGSDSD 559
Query: 485 -------TYPR--RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNN 535
P+ +FISFC + G+S+EE + + + + Y +R PP+ +
Sbjct: 560 SDSEPIIVQPKIEKFISFCSIANGISNEEFKEIDRLTRGNW--FPYDERKPPTDW--VEF 615
Query: 536 SKERPDVWIESPEKSIILSITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLD 592
+ P WI+ P+ S++L + + D +S+++ +L R+R+DK W
Sbjct: 616 GTKTPREWID-PKNSVVLEVKARSIDNEESKSDLYKTGSTLYNAYCKRIRHDKNWSTAST 674
Query: 593 VQSF 596
V +
Sbjct: 675 VAEY 678
>gi|336244801|gb|AEI28318.1| ATP-dependent DNA ligase IV, partial [Hemidactylus bowringii]
Length = 352
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 204/374 (54%), Gaps = 36/374 (9%)
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQGMISGGLT 125
E++LA I+ L + + DA++L+N+R G+ + +F A VL+ R + G LT
Sbjct: 1 ETMLAKLYIELLNLPRGGDDALKLLNYRTPAGSRGDGRDFATTAYFVLKPR-CIKQGQLT 59
Query: 126 IKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
I+++N LLD ++ + K V L LI +++A E KW+I +I+KDLKLG+S++++F
Sbjct: 60 IQQVNVLLDSVSVNNASKRKDLVRKSLLQLITQSSALEQKWLIRMIVKDLKLGVSQQTLF 119
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
FHP+A +LF+VT DL+ VC +L D + I + A +P LA I D +++
Sbjct: 120 SIFHPEASELFSVTTDLEKVCRQLHDPSVSLSDVSISLFSAFKPMLAA-IADIQQIEKQM 178
Query: 243 HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH-----AMSKIIEQNVL--- 293
+ + IE K DG+RIQ+HK+G YFSR+ D++ ++G +++ + NV
Sbjct: 179 NHRSFYIETKLDGERIQMHKDGDVYKYFSRNGYDYTQQFGASPLEGSLTPFV-HNVFRED 237
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIH 353
V CILDGEM+ ++ + F + GS +I + D SD Q C+ FDVL V + H
Sbjct: 238 VQNCILDGEMMAYNPTTQAFMQKGSKFDIKRMVED---SDLQTCFCVFDVLMVNGRKLGH 294
Query: 354 QSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETI 413
+ L +R+E+L K+ P GR++ ++ A EV E I
Sbjct: 295 EILSKRYEILNKLFTPITGRIQVILKHQ-----------------ASTRKEVIDALNEAI 337
Query: 414 ENRDEGIVLKDLGS 427
+ R+EGIV+KD S
Sbjct: 338 DKREEGIVVKDPAS 351
>gi|344303172|gb|EGW33446.1| dsDNA break repair ligase [Spathaspora passalidarum NRRL Y-27907]
Length = 948
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 165/608 (27%), Positives = 278/608 (45%), Gaps = 90/608 (14%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINW--------RK 95
D + + RLI P D+ Y +K+ VLA +I + KDS D L NW R
Sbjct: 66 DIYPSARLIFP--DKAGRLYYIKDIVLARLIIKMYSIPKDSDDYSMLYNWKLQYQKTKRF 123
Query: 96 GGAAPNAGNFPMVAAEVLQRRQGMI--SGGLTIKELNDLLDRLASSENRAEKISVLSTLI 153
+ P+ AA ++ R+ + + ++ ++N LD L ++ AE+I +L L
Sbjct: 124 TVDQHKLRDLPLQAARIISNRRNYMNETHEFSVADINAKLDALNLAKKSAEQIEILKPLF 183
Query: 154 KKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRH 213
E++W+I IILK LG E + +HPDA L+++ +L+ L D N R
Sbjct: 184 DTLTIPELRWLIHIILKKTILGFFENYFLNSWHPDASRLYSICNNLQKTVNYLVDPNTRV 243
Query: 214 KRQDIEVGK--AVRPQLAMRIGDAHAA----WRKLHGKE---------------VVIECK 252
+ V +PQLA ++ ++A ++K+ E IE K
Sbjct: 244 DPNLLTVHPFYPFKPQLAQKLSSSYAKLIKDFQKITDMEPQMQTLFDKLDLKDKFYIEEK 303
Query: 253 FDGDRIQIHKNGSEIHYFSRSFLDHS-------EYGHAMSKIIEQNVL--VDRCILDGEM 303
DGDR+ +HK G ++SR D+S E+G +++K + + VD ILDGEM
Sbjct: 304 MDGDRMVLHKEGPHFKFYSRRLKDYSFLYGENYEFG-SLTKYLTEAFPGNVDSVILDGEM 362
Query: 304 LVWDTSLNRFAEFGS--NQEIAKAAR-----DGLSSDRQLCYF-AFDVLYVGDTSVIHQS 355
+ +D FG+ + I ++ R D YF FD+LY+ ++ +
Sbjct: 363 VAYDYVRKAILPFGTLKSSAIQESVRQYTIIDQYEQQSSYPYFLVFDILYLNGRNLTNYP 422
Query: 356 LKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN 415
L R +L KV++P R E H S ++ +++++++ +E + +
Sbjct: 423 LFFRKNILNKVIRPIPNRFEI----HD-------------SRISSSIEDIKRAIREIVGS 465
Query: 416 RDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFL 474
R EG+VLK SK+ G R+ KW+KLKPEY+ + G +LD+++I G+ G ++
Sbjct: 466 RSEGLVLKHTQSKYHIGYRNLKWIKLKPEYLEKFGENLDLVVI------GKVPGVKNSYM 519
Query: 475 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAV--VTKLKPYFRKYEYPKRAPPSFYQV 532
L Y SFC G ++EE D + +T K K + P ++ F
Sbjct: 520 TGLRNETDGSYY-----SFCMCANGFTNEEFDKIERITHGKWIKTKDQIPSKSVIQF--- 571
Query: 533 TNNSKERPDVWIESPEKSIILSITSDIRTIRSE-VFSAPYSLRFPRIDRVRYDKPWHDCL 591
++P WI +P S++L I + +SE F+ +L R+R DK +C+
Sbjct: 572 ---GTKQPPWWI-NPRDSLVLEIKARSIDAQSEKTFAVGSTLHNMYCRRIRTDKNIDECI 627
Query: 592 DVQSFVEL 599
+Q + +L
Sbjct: 628 SMQEYFQL 635
>gi|336244791|gb|AEI28313.1| ATP-dependent DNA ligase IV, partial [Scincella reevesii]
Length = 342
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/366 (33%), Positives = 202/366 (55%), Gaps = 38/366 (10%)
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQGMISGGLT 125
E++LA I+ L + KD DA++L+N+R G+ +AG+F +A VL+ R + G LT
Sbjct: 1 ETMLAKLYIELLNLPKDGKDALKLLNYRAPTGSRGDAGDFASIAYFVLKPR-CIKQGQLT 59
Query: 126 IKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
I+ +NDLLD ++S+ K V L LI +++A E KW+I +I+KDLKLG+S++++F
Sbjct: 60 IQHVNDLLDSVSSNNAAKRKDLVKKSLLQLITQSSALEQKWLIRMIIKDLKLGVSQQTLF 119
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
FHPDA +L NVT DL+ VC +L + + I + A +P LA I + +++
Sbjct: 120 SIFHPDAAELHNVTTDLEKVCIQLHNPSVSLSDVSISLFSAFKPMLA-AIANVQQIEKQM 178
Query: 243 HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGHA---------MSKIIEQNV 292
+ + IE K DG+R+Q+HK+G YFSR+ +++ ++G + + + N
Sbjct: 179 NNQSFYIETKLDGERMQMHKDGDVYKYFSRNGYEYTQQFGASPLEGSLTPFIHNFFKNN- 237
Query: 293 LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVI 352
+ CILDGEM+ ++ + F + GS +I + D S+ Q C+ FDVL + D +
Sbjct: 238 -IQNCILDGEMMAYNPTTQTFMQKGSKFDIKRMVDD---SELQTCFCVFDVLMINDQKLG 293
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
++ L +R+E+L K+ P GR++ ++ A+ EV E
Sbjct: 294 YEVLSKRYEILNKIFTPIVGRMQVVLKRQ-----------------ANTRKEVIDALNEA 336
Query: 413 IENRDE 418
I+NR+E
Sbjct: 337 IDNREE 342
>gi|410074987|ref|XP_003955076.1| hypothetical protein KAFR_0A05050 [Kazachstania africana CBS 2517]
gi|372461658|emb|CCF55941.1| hypothetical protein KAFR_0A05050 [Kazachstania africana CBS 2517]
Length = 948
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 159/592 (26%), Positives = 274/592 (46%), Gaps = 75/592 (12%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAG 103
D + AL L LP R+R Y +K+ L + L + K+S RL+NW++
Sbjct: 67 DIYPALILALPY--RDRRMYNVKDYTLIKAICTYLKLPKNSFTEKRLLNWKQRADRSVKL 124
Query: 104 NFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSEN-------RAEKISVLSTLIKKT 156
+ V ++ + + +T+ ELN LLD L+ N + S+ + I+K
Sbjct: 125 SVSCVNEMRKRKSEPVEKSPITLDELNTLLDFLSQDRNIKGRGYKNLSESSIFTYCIEKM 184
Query: 157 NAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRN--QRHK 214
+ E+++ IILK +G E + + +HPDAED +V DLK VC +L + N RH
Sbjct: 185 SFMELRYFFDIILKARVIGPHEHKLLNAWHPDAEDYLSVVSDLKTVCTRLWNPNIRLRHD 244
Query: 215 RQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSR 272
I +G A P LA ++ ++ K + IE K DG+RIQIH G++I + SR
Sbjct: 245 ELSINIGYAFAPHLAKKLSISYDKICKKLKNDFFIEEKMDGERIQIHYMDYGNDIKFLSR 304
Query: 273 SFLDHSE-YGHAMSK-----IIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAA 326
+D++ YG +S ++ N V C+LDGEM+ +D + FG + AA
Sbjct: 305 RGVDYTYLYGENLSTGTIACYLKLNRDVKECVLDGEMVTYDEDQDILLPFGM---VKSAA 361
Query: 327 RDGLS------SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPD 380
+ L+ D FD++++ +S++ L +R + L V++P + R++ +
Sbjct: 362 MNALTKEEISGQDYHPLLMVFDLVFLNGSSLVEFPLYQRKDYLASVLEPYRARVQIVNFT 421
Query: 381 HGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLK 440
N ++ + K + I EGIVLK+ S++ G R+ W+K
Sbjct: 422 RCSNENI-----------------IRKSLEHAISVGSEGIVLKNYNSRYMIGSRNDSWIK 464
Query: 441 LKPEYI-RAGSDLDVLIIG-------GYY--------GSGRRGGEVAQFLVALA------ 478
+KPEY+ + G ++D+++IG +Y + E+ + +V L
Sbjct: 465 IKPEYLEQFGENMDLIVIGRDSAKKDSFYCGLTVLDEEEEKLVEEIDKGVVNLVSDESDY 524
Query: 479 ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKE 538
E P + + ++ +SFC + G+S E + K + +++K E + PP ++ +
Sbjct: 525 ENPENNRHIKKVVSFCMIANGISQNEYKEIYRKTRGFWKKTE--EVPPPP--ELIEFGTQ 580
Query: 539 RPDVWIESPEKSIILSITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 587
P WIE PE S++L I + D + F A +L R+R D W
Sbjct: 581 VPMEWIE-PEHSVVLEIKARSLDNTESSCKRFKAGCTLYGGYCRRIRDDVDW 631
>gi|254571701|ref|XP_002492960.1| DNA ligase required for nonhomologous end-joining (NHEJ)
[Komagataella pastoris GS115]
gi|238032758|emb|CAY70781.1| DNA ligase required for nonhomologous end-joining (NHEJ)
[Komagataella pastoris GS115]
Length = 932
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 179/660 (27%), Positives = 293/660 (44%), Gaps = 89/660 (13%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWR---KGGAAPNA 102
+ A RLI P+LD+ Y +K+ L ++D + KDS D L NW+ + N
Sbjct: 65 YPASRLIFPNLDKRH--YNIKDFTLIKFILDIFQVPKDSEDTKILRNWKGKYENRMRSNK 122
Query: 103 GNFPMVAAEVLQRRQGMI--SGGLTIKELNDLLDRLASSENR-AEKISVLSTLIKKTNAQ 159
+ + V++ R+G + ++I LN+LLD + E + +++ +L+ + +
Sbjct: 123 NDLAQLLTGVIKARRGAVLDRPEISIDRLNELLDTMTRPETKPSDQKKILTEIFNHVDNI 182
Query: 160 EMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDR--NQRHKRQD 217
E+KW + I+LK +G + + F ++HPDA +L + DLK V +L DR +
Sbjct: 183 ELKWFLRILLKRKLMGGMDFTFFRQWHPDAVELLQLVNDLKTVFWELTDRLIPLPEAGRV 242
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH------KNGSEIHYFS 271
I VG+A RPQLAMR + L IE K DG+RI IH E YFS
Sbjct: 243 IRVGRAFRPQLAMRPNRTYDQIATLFDNNFYIEDKLDGERILIHISLNDTTQQHEFKYFS 302
Query: 272 RSFLDHSE-YGH-----AMSKIIEQNVL--------VDRCILDGEMLVWDTSLNRFAEFG 317
RS D++ YG A S I+ + + +LDGE LV+D N FG
Sbjct: 303 RSGTDYTYLYGSNYEEGAFSPFIKGCFIDLKDDTKEIRSMVLDGEFLVYDNKRNVILPFG 362
Query: 318 -----SNQEIAKAARDGLSSDRQLCYF-AFDVLYVGDTSVIHQSLKERHELLQKVV-KPS 370
S + + D S YF +D++++ TS ++LK R LL K++ P
Sbjct: 363 ALKSASLTRLMEEKNDSEDSQETQVYFVVYDLVFLNGTSFQDKALKVRRNLLNKILANPI 422
Query: 371 KGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWE 430
R+E + G H ++E + I + EGIV+K+ SK+
Sbjct: 423 PNRIEVIKYTEG-----------------HVGSDIEAAMRSAIHDNREGIVVKNPKSKYY 465
Query: 431 PGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRR 489
R+ W+K+KPEY+ G ++D++I+ G+R G ++ L E D Y R
Sbjct: 466 IASRNLNWVKIKPEYLEEFGENIDLIIL------GKRKGLKNAYICGLRESLGNDRY--R 517
Query: 490 FISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEK 549
F+S R+ G + + + + L + K PP Y D W++ P++
Sbjct: 518 FLSLARIANGFTGQMYEEIEHSLGSKWVNIR--KTQPPYPYIDLGEISSMVDYWVD-PKE 574
Query: 550 SIILSITSDIRTIR----SEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNG 605
S++L I + R+I + ++A +L R+R DK + C + E+
Sbjct: 575 SVVLEIKA--RSIDIGDGGKRYAAGTTLYNAYCVRIRSDKDFLSCSTFADYKEI------ 626
Query: 606 TTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
T K + + +K S RK +IV L + ++SIF D +F +L
Sbjct: 627 KTSKSRH----KTEKTHSLMSKRKR-----TIVTEPILAK--QSVSSKSSIFKDYIFYVL 675
>gi|113913527|gb|ABI48907.1| LIG4 [Saccharomyces cariocanus]
Length = 942
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 167/604 (27%), Positives = 273/604 (45%), Gaps = 84/604 (13%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWR-KGGAAPNAGN 104
+ AL L LP R+R Y +K+ VL + L + K+SA RL +W+ + G N +
Sbjct: 70 YPALVLALPY--RDRRIYNIKDYVLIRTICSYLKLPKNSATEQRLKDWKQRVGKDRNLSS 127
Query: 105 FPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE-------KISVLSTLIKKTN 157
++ E+ +R+ +TI ++N LD L+ N + K ++ +
Sbjct: 128 --LLVEEIAKRKTEPSGKAITIDDVNGHLDELSKDRNASGRGFRNLVKSKPFLYCLENMS 185
Query: 158 AQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD 217
E+K+ I+LK+ + E + +HPDA+D +V DLK+V KL D R K D
Sbjct: 186 FVELKYFFDIVLKNRVIRGQEHKFLNCWHPDAQDYLSVVSDLKVVTSKLYDLKVRLKDDD 245
Query: 218 --IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRS 273
I+VG A PQLA ++ + + ++E K DG+RIQ+H G I +FSR
Sbjct: 246 LSIKVGFAFAPQLAKKVNLPYEKICHTLHDDFLVEEKMDGERIQVHYMNYGKSIKFFSRR 305
Query: 274 FLDHSE-YGHAMSK-IIEQNV----LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR 327
+D++ YG ++S I Q++ V C+LDGEM+ +D FG + AK A
Sbjct: 306 GIDYTYLYGASLSSGTISQHLKFINSVKECVLDGEMVTFDARRQVILPFGLVKGSAKEAL 365
Query: 328 --DGLSS-DRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLN 384
D +++ D Y FD+LY+ TS+ L +R + L ++ P K +E +
Sbjct: 366 SFDNINNVDFHPLYMVFDLLYLNGTSLTPLPLHQRKKYLNSILTPLKNMVEIV------- 418
Query: 385 SHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPE 444
+ C+ V+ ++K + I EG+VLK S + R+ W+K+KPE
Sbjct: 419 -----RSSRCYG-----VESIKKSLEVAISLGSEGVVLKYYNSSYNVASRNNNWIKVKPE 468
Query: 445 YIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTY----------------- 486
Y+ G +LD++II GR G+ F++ L + Y
Sbjct: 469 YLEEFGENLDLIII------GRDSGKKDSFMLGLVVLDEKEMYRKDQGSSSEVVDDSNQG 522
Query: 487 ---------PRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSK 537
++ +SFC + G+S EE + K + Y+++ P S +
Sbjct: 523 ENIQNSRKKVKKILSFCSIANGISQEESKEIDRKTRGYWKRTS--DVVPSSILEF---GS 577
Query: 538 ERPDVWIESPEKSIILSITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQ 594
+ P WI+ P KSI+L I S D + ++ +L R+RYDK W DC +
Sbjct: 578 KIPTEWID-PSKSIVLEIKSRSLDNTETDMQKYATSCTLYGGYCKRIRYDKEWTDCYTLD 636
Query: 595 SFVE 598
E
Sbjct: 637 DLYE 640
>gi|354546740|emb|CCE43472.1| hypothetical protein CPAR2_211160 [Candida parapsilosis]
Length = 942
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 167/634 (26%), Positives = 288/634 (45%), Gaps = 83/634 (13%)
Query: 19 IQKTKPAAKKRSKF-RKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLI 75
+Q+ ++R++ F+ T+ + D + +LI P ++ Y +KE LA +I
Sbjct: 39 LQEASTITERRAQIINDFIATFRTHIGNDILQSAKLIFP--EKAGRLYFIKEVALARLII 96
Query: 76 DALGMSKDSADAVRLINW--------RKGGAAPNAGNFPMVAAEVLQRRQGMIS--GGLT 125
+ KD+ + L W R + P+ AA ++ R+ I T
Sbjct: 97 KMYKIPKDTEEYNLLHYWNRQYQKSKRFASDERKIRDLPLQAARIIATRRSYIERCKECT 156
Query: 126 IKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEF 185
+ ++N LLD L ++ E + +L L + +E++W+I IILK L EK F+ +
Sbjct: 157 VPQINTLLDDLTLAKKPQEHLDLLQPLFDSSRIEEIRWLIQIILKKPILVHMEKYFFNSW 216
Query: 186 HPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGK--AVRPQLAMRIGDAH-AAWRKL 242
HPD LF++ L+ L D N+R + +D+ + +PQLA ++ + RKL
Sbjct: 217 HPDGYRLFSICNSLETTFNLLSDPNKRFETKDLGIHPRFKFKPQLAEKLSSNYDIVVRKL 276
Query: 243 HGKE------------------VVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH- 282
K+ IE K DGDR+ +HK G +FSR D+S YG
Sbjct: 277 QKKQPMEPQYEAKFKQLQLENKFYIEEKMDGDRMLLHKEGGRFKFFSRRLKDYSFLYGES 336
Query: 283 ----AMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGS--NQEIAKAARDGLSSDR 334
+++K + +D ILDGEM+ +D FG+ + I ++ R + D
Sbjct: 337 LQFGSLTKYLRDAFANNIDSIILDGEMVAFDYKRQAILPFGTLKSSAIQESVRQFTTIDH 396
Query: 335 ------QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVR 388
Y FD+LY+ + + L R LL +++KP R E V D L S
Sbjct: 397 YEQQTSYPYYLIFDILYLNGRDLSNYPLFFRKNLLDRIIKPVPYRFE--VHDARLGS--- 451
Query: 389 PQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWE-PGDRSGKWLKLKPEYI- 446
+V ++EK +E + +R EG+VLK + S++ G R+ W+KLKPEY+
Sbjct: 452 ------------SVADIEKAIREVVTSRSEGLVLKHVQSRYVIDGFRNPNWIKLKPEYLE 499
Query: 447 RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 506
+ G +LD+++I G+ G +++ L + + SFC G EE D
Sbjct: 500 KFGENLDLVVI------GKNPGVKNSYMMGLKNKKDGSEDYGAYYSFCMCANGFEVEEFD 553
Query: 507 AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSE- 565
+ ++ ++ PP Q+ +++PD WI+ P+ S++L I + +R E
Sbjct: 554 KIERLTHGHW--INTAQQMPPE--QLIKFGRKKPDFWID-PKYSLVLEIRARSIDVRPEA 608
Query: 566 VFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
F+ +L R+R DK +C+ +Q ++E+
Sbjct: 609 TFAVGTTLHNMHCRRIREDKSIDECISMQEYIEM 642
>gi|328353026|emb|CCA39424.1| DNA ligase 4 [Komagataella pastoris CBS 7435]
Length = 932
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 178/660 (26%), Positives = 293/660 (44%), Gaps = 89/660 (13%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWR---KGGAAPNA 102
+ A RLI P+LD+ Y +K+ L ++D + KDS D L NW+ + N
Sbjct: 65 YPASRLIFPNLDKRH--YNIKDFTLIKFILDIFQVPKDSEDTKILRNWKGKYENRMRSNK 122
Query: 103 GNFPMVAAEVLQRRQGMI--SGGLTIKELNDLLDRLASSENR-AEKISVLSTLIKKTNAQ 159
+ + V++ R+G + ++I LN+LLD + E + +++ +L+ + +
Sbjct: 123 NDLAQLLTGVIKARRGAVLDRPEISIDRLNELLDTMTRPETKPSDQKKILTEIFNHVDNI 182
Query: 160 EMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDR--NQRHKRQD 217
E+KW + I+LK +G + + F ++HPDA +L + DLK V +L DR +
Sbjct: 183 ELKWFLRILLKRKLMGGMDFTFFRQWHPDAVELLQLVNDLKTVFWELTDRLIPLPEAGRV 242
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH------KNGSEIHYFS 271
I VG+A RPQLAMR + L IE K DG+RI +H E YFS
Sbjct: 243 IRVGRAFRPQLAMRPNRTYDQIATLFDNNFYIEDKLDGERILMHISLNDTTQQHEFKYFS 302
Query: 272 RSFLDHSE-YGH-----AMSKIIEQNVL--------VDRCILDGEMLVWDTSLNRFAEFG 317
RS D++ YG A S I+ + + +LDGE LV+D N FG
Sbjct: 303 RSGTDYTYLYGSNYEEGAFSPFIKGCFIDLKDDTKEIRSMVLDGEFLVYDNKRNVILPFG 362
Query: 318 -----SNQEIAKAARDGLSSDRQLCYF-AFDVLYVGDTSVIHQSLKERHELLQKVV-KPS 370
S + + D S YF +D++++ TS ++LK R LL K++ P
Sbjct: 363 ALKSASLTRLMEEKNDSEDSQETQVYFVVYDLVFLNGTSFQDKALKVRRNLLNKILANPI 422
Query: 371 KGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWE 430
R+E + G H ++E + I + EGIV+K+ SK+
Sbjct: 423 PNRIEVIKYTEG-----------------HVGSDIEAAMRSAIHDNREGIVVKNPKSKYY 465
Query: 431 PGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRR 489
R+ W+K+KPEY+ G ++D++I+ G+R G ++ L E D Y R
Sbjct: 466 IASRNLNWVKIKPEYLEEFGENIDLIIL------GKRKGLKNAYICGLRESLGNDRY--R 517
Query: 490 FISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEK 549
F+S R+ G + + + + L + K PP Y D W++ P++
Sbjct: 518 FLSLARIANGFTGQMYEEIEHSLGSKWVNIR--KTQPPYPYIDLGEISSMVDYWVD-PKE 574
Query: 550 SIILSITSDIRTIR----SEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNG 605
S++L I + R+I + ++A +L R+R DK + C + E+
Sbjct: 575 SVVLEIKA--RSIDIGDGGKRYAAGTTLYNAYCVRIRSDKDFLSCSTFADYKEI------ 626
Query: 606 TTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFCIL 665
T K + + +K S RK +IV L + ++SIF D +F +L
Sbjct: 627 KTSKSRH----KTEKTHSLMSKRKR-----TIVTEPILAK--QSVSSKSSIFKDYIFYVL 675
>gi|449670179|ref|XP_004207211.1| PREDICTED: DNA ligase 3-like [Hydra magnipapillata]
Length = 759
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 144/502 (28%), Positives = 245/502 (48%), Gaps = 55/502 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
L+++E++ L+ L++ +I VL+ + K+ A+ + +II +I DL++ K F
Sbjct: 117 LSLQEVDGYLEELSNVTKEEAQIKVLTKICKRCTAENLCFIIKLIKHDLRMNTGPKHFFD 176
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ---------DIEVGKAVRPQLAMRIGD 234
A LF + DLK V EK N K + V ++P LA
Sbjct: 177 ALDSSAYALFQASSDLKSVIEKWTQLNSEEKLSSGTKNLLSIETSVMTPIKPMLADACKS 236
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLV 294
A +K + E K+DG+R+Q+HKNG++ Y+SRS S H ++ I + L
Sbjct: 237 IEQAIKKCPNG-MYSEIKYDGERVQVHKNGNKFEYYSRSL--KSVQPHKIADIT--HYLP 291
Query: 295 DRC------ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGD 348
C ILDGE+L+ DT+ N+ FG+ I K ++ ++ +CY FD+L
Sbjct: 292 QACPGGDTLILDGEVLLMDTNTNKPLPFGT-LSIHKKSK---FAEATVCYVIFDILQFNS 347
Query: 349 TSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKF 408
S++ + L ER E+L K VK KGR+ + S ++ DE++
Sbjct: 348 ESLLKRPLCERREILCKNVKEIKGRI--------VFSEMKE---------ITKSDELQCQ 390
Query: 409 FKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGR 465
K+ EG+V+KD+ S +EPG R WLK+K +Y++ G+ D++++G YYG+G
Sbjct: 391 LKKVFSENLEGLVIKDIKSIYEPGKR--HWLKIKKDYLQDGAMADTADLVVLGAYYGTGN 448
Query: 466 RGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA 525
+GG ++ FL+ + PD +++++ + G G D+ + + + L+ +K
Sbjct: 449 KGGMMSVFLMGCYD---PDQ--KKWLTVAKCGNGFDDDTIKKLQSSLQ--MKKISKDPDN 501
Query: 526 PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
PS+ +V N PD P+ S + IT + + +A S+RFPR+ +VR DK
Sbjct: 502 VPSWLEV--NRSLIPDFVAVDPKTSPVWEITGAEFSQSTTHTAAGISIRFPRVTKVRSDK 559
Query: 586 PWHDCLDVQSFVELVHSSNGTT 607
W ++ +L + S TT
Sbjct: 560 DWKSATNLSQLQKLYNESKKTT 581
>gi|255712847|ref|XP_002552706.1| KLTH0C11286p [Lachancea thermotolerans]
gi|238934085|emb|CAR22268.1| KLTH0C11286p [Lachancea thermotolerans CBS 6340]
Length = 951
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 182/670 (27%), Positives = 308/670 (45%), Gaps = 96/670 (14%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNA 102
D+F ALRL+ P R+ +Y +K+ L + AL +S+DS RL+NW++ G +
Sbjct: 77 DFFPALRLMFPY--RDPRAYHIKDFTLIKAVCKALNLSRDSLTERRLLNWKQYAGRGTSL 134
Query: 103 GNFPMVAAEVLQRR-QGMISGGLTIKELNDLLDRLA--SSENRAEKISVLST------LI 153
F E+ +RR + + LTI LN+ LD LA +S +A + LS +
Sbjct: 135 SKF--CVQEISKRRKEPLPERQLTIDGLNEKLDELAKEASGKKAWGTTGLSESHSFQFCL 192
Query: 154 KKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRH 213
K + E+++ I+LK+ +G E +HPDA+ V DLK++ +KL + + R
Sbjct: 193 KNLSFLELRYFFDIVLKNRVIGGLEHKFLACWHPDAQIYLGVVTDLKILSKKLWNPSVRL 252
Query: 214 KRQD--IEVGKAVRPQLAMRIGDAHAAWRKLHGK---EVVIECKFDGDRIQIH--KNGSE 266
++D I +G A P LA R+ H ++ ++ K + ++E K DG+RIQ+H GS
Sbjct: 253 DKRDLSINIGHAFAPHLAKRL---HVSYERICSKLKHDFILEEKMDGERIQLHYVNGGSV 309
Query: 267 IHYFSRSFLDHSE-YGHAMSKIIEQNVL-----VDRCILDGEMLVWDTSLNRFAEFGSNQ 320
+ + SR +D S YG +++ + L V C+LDGEM+ +D FG
Sbjct: 310 LKFLSRRGIDFSHLYGQEVARGVISQYLKLKSDVRDCVLDGEMVSYDKKRKIILPFGI-- 367
Query: 321 EIAKAARDGLSSDR--------QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKG 372
+ AA D L + + Y FD++Y+ S+ L R E L++++ P
Sbjct: 368 -VKSAAVDELINSEVGNENDGYRPLYMVFDLVYLNGVSLTKVPLHIRKEYLKEILSPVPD 426
Query: 373 RLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPG 432
+E L + A + ++ F + IE EG+++K S +E G
Sbjct: 427 VVEILK-----------------GIRACDAKAIKNFMQRAIEMGSEGVIVKQASSTYEVG 469
Query: 433 DRSGKWLKLKPEYIR-AGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYP---- 487
R+ W+K+KPEY G +D+++IG G++ + LV+ +E + P
Sbjct: 470 ARNDHWVKIKPEYFEDLGETMDLVVIG--RDPGKKDSLMCGLLVSDSEHILENFGPIEHG 527
Query: 488 ------RRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPD 541
+ +SFC V G+SDEE + K + + Y K PP + SK P
Sbjct: 528 KEGDPIIKCVSFCNVANGVSDEEFKEINRKTRGSWVSY---KEKPPPLSLLEFGSK-IPV 583
Query: 542 VWIESPEKSIILSITSDIRTIRSEVFS-----APYSLRFPRIDRVRYDKPWHDCLDVQSF 596
WI+ P+ S+++ + + R++ + +S A +L R+R DK W C V +
Sbjct: 584 EWID-PKNSVVIEVKA--RSVENSEYSSKRYRAGSTLHSAYCRRIRNDKDWTTCTSVAQY 640
Query: 597 VELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGE-TS 655
+ + N K K + P++ K+NV + + S++ E +S
Sbjct: 641 QQAKAAHNYHRYKRK----VHQVSPRR--------KRNVHEIFEYCAGEAKSELDTEGSS 688
Query: 656 IFSDMVFCIL 665
IF + F IL
Sbjct: 689 IFEGLHFYIL 698
>gi|367017061|ref|XP_003683029.1| hypothetical protein TDEL_0G04510 [Torulaspora delbrueckii]
gi|359750692|emb|CCE93818.1| hypothetical protein TDEL_0G04510 [Torulaspora delbrueckii]
Length = 969
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 174/611 (28%), Positives = 280/611 (45%), Gaps = 91/611 (14%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINW-RKGGAAPNA 102
+ F AL L LP R+R Y +K+ L + L + K SA RL+ W R+
Sbjct: 85 NIFPALVLSLPY--RDRRIYNIKDYTLVKAICSYLALPKQSATEKRLLKWKRRATRGVRL 142
Query: 103 GNFPMVAAEVLQRRQGMISGG--LTIKELNDLLDRLASSENRAEKISVLST------LIK 154
NF E +++R+ S G +TI +LN+ LD L N LS ++
Sbjct: 143 SNF---CVEEIRKRKSEPSPGRRITIDKLNECLDHLVEERNAKGGFKGLSDSPTFNFCLQ 199
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHK 214
+ E+++ I+LK+ +G E + + +HPDA D +V DL+ V +L D R +
Sbjct: 200 NMSFIELRFFFDIVLKNRVIGGQEHKLLNCWHPDALDYLSVVSDLETVASRLWDPEHRLR 259
Query: 215 RQD--IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYF 270
R D I +G A PQLA ++ ++ + +IE K DG+RIQ+H G++I +
Sbjct: 260 RDDLSINLGYAFVPQLAKKMTISYEKICTKLNNDFLIEEKMDGERIQVHYMDYGAKIRFL 319
Query: 271 SRSFLDHSE-YGHAMSKIIEQNVL-----VDRCILDGEMLVWDTSLNRFAEFGSNQEIAK 324
SR +D+++ YG + N L V C+LDGEM+ +DT N FG +
Sbjct: 320 SRRGVDYTQLYGENLQSGTVANYLNFDSNVRDCVLDGEMITFDTDRNVVLPFGM---VKS 376
Query: 325 AARDGLSSDRQLC-------YFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETL 377
+AR LS++ +C D++Y+ S+I L +R E L +V+KP +E L
Sbjct: 377 SARQALSTE-GICSQGHRPMLMVLDLVYLNGVSLIKLPLYQRKEFLNRVLKPCPHAVEIL 435
Query: 378 VPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK 437
+VR C A + K +++I EGIVLK +++E G R+
Sbjct: 436 -------PYVR-----CSEHTA-----IRKSLEKSISMGSEGIVLKSYKARYEIGARNDY 478
Query: 438 WLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRR------- 489
W+K+KPEY+ + G +LD++IIG G++ + V E + +R
Sbjct: 479 WIKVKPEYLEQFGENLDLVIIG--RTPGKKDSLMCGLAVYEGEEDLNEIEAKRESAIVNL 536
Query: 490 ------------------FISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQ 531
FISFC + G+S +E + K + + K + +R P +
Sbjct: 537 DSEGDELDDTDGKKIIKYFISFCVIANGISQQEFKEIDRKTRGAWVKSD--QRLPSA--D 592
Query: 532 VTNNSKERPDVWIESPEKSIILSITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWH 588
+ + P+ WI+ P+ SI+L + + D + F+A +L R+R DK W
Sbjct: 593 LLRFGSKIPEEWID-PKNSIMLEVKARSLDNTESSKKKFAAGCTLHGGYCRRIRDDKDWT 651
Query: 589 DCLDVQSFVEL 599
C SF EL
Sbjct: 652 GCY---SFSEL 659
>gi|170071033|ref|XP_001869792.1| DNA ligase 4 [Culex quinquefasciatus]
gi|167866990|gb|EDS30373.1| DNA ligase 4 [Culex quinquefasciatus]
Length = 805
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 168/616 (27%), Positives = 268/616 (43%), Gaps = 117/616 (18%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK---GGAAPNA 102
F LRL+LP DRER SYG++ L + I LG+S+ S +A +L + + GG A ++
Sbjct: 7 FPVLRLLLPGADRERDSYGVRVKSLRDLYIKVLGISESSTEARKLSGYDEETGGGGASSS 66
Query: 103 GNFPMVAAEVLQRRQGMI--SGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTN 157
+F A V + QG G LT+ E+N+ LD + E+ + L L+ +
Sbjct: 67 EDF---ADRVFRLMQGRCPPEGSLTVWEVNERLDAIGGHYVNGERRRIGEELERLVGGMS 123
Query: 158 AQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKL----KDRNQRH 213
+ KW+I I+LK+L+LG+S I +H A L++ +L VCE +
Sbjct: 124 QVDQKWLIRILLKNLRLGMSLGKILGVYHAKAGQLYDRFSNLSKVCEVVESGEGWEELGE 183
Query: 214 KRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRS 273
+E+ V+P L R+ D L E +E K DG+R QIHK+G YFSR+
Sbjct: 184 GGGSVELFHPVKPMLCQRV-DLKLVDGMLKRDEYWLETKMDGERFQIHKDGVVFKYFSRN 242
Query: 274 FLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD 333
+++ KA + +
Sbjct: 243 SYEYN--------------------------------------------VKAVKSDNPTL 258
Query: 334 RQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEP 393
R C+ +DVL++ S+I ER LL ++KP G L T
Sbjct: 259 RP-CFCVYDVLFLNGKSLIAVPYAERIRLLGTLIKPKVGVLTT----------------- 300
Query: 394 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-RAGSDL 452
C + +E R ++ G + P +R+ W K+KP+YI SD
Sbjct: 301 CKRI--------------KVERRSGH---QEAGLDYSPNERNAGWYKIKPDYIDNLVSDF 343
Query: 453 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 512
D+LI+GG+Y + R V +LV + ++ DT F++ +VG GLS ++ + T L
Sbjct: 344 DLLIMGGFYNAKR--SFVNTYLVGVLDKSTEDT----FLAVTKVGIGLSVDQWRTLNTSL 397
Query: 513 KPYFRKYEYPKRA-------PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSE 565
+P++R+ + + PP + PDVWI P SI+L + +RS
Sbjct: 398 RPHWREVTFRREGRSKISEEPPGLRW----GQTAPDVWI-PPNHSIVLQLKGS-ELVRSA 451
Query: 566 VFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFR 625
F+ Y++RFPRI +R DK + D + F L ++ + K + D P
Sbjct: 452 SFATSYTIRFPRITAIRSDKDFKDVCTGEEFARLCSANTTVAKLAKRHVTAADLLPPSGS 511
Query: 626 SSRKGEKKNVSIVPSH 641
+SRK +K +S + S
Sbjct: 512 TSRK--RKQISPLKSR 525
>gi|406605056|emb|CCH43527.1| DNA ligase IV [Wickerhamomyces ciferrii]
Length = 950
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 179/665 (26%), Positives = 305/665 (45%), Gaps = 80/665 (12%)
Query: 32 FRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLI 91
FR++ T ++ + AL LILP DR R Y +K+ VL +++ L + K+S +++
Sbjct: 85 FREWRSTVGPNI--YPALCLILPHKDRTR-IYNIKDQVLGRRILEILKIPKNSETTSKIM 141
Query: 92 NWRKGGAAPNAGNFPMVAAEVLQRRQGMISGG-LTIKELNDLLDRLASSENRAEKIS-VL 149
NW++ +A A + EV+Q R+ GG L+I ++ND+LD ++ E + E+ + +L
Sbjct: 142 NWKRSRSA-KAARMSDICIEVIQARRTDKKGGELSIGDVNDILDEMSKDEFKKEQQNKML 200
Query: 150 STLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDR 209
L+ K E+++ I+LK + E I + +HPDA+ +V LK V KL D
Sbjct: 201 IELLDKMCFLELRYFFDILLKKNVVKNMENRILNTWHPDAQQYLSVVTSLKTVAYKLYDP 260
Query: 210 NQRHKRQD--IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKN--GS 265
N+R + D I + K PQLA++ +++ + + IE K DG+RIQ+H + G
Sbjct: 261 NERLNKTDLSINLSKPFAPQLALKPNLSYSRVVQKLENDFFIEEKMDGERIQMHYDNYGK 320
Query: 266 EIHYFSRSFLDHSE-YGH-----AMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSN 319
I+Y+SR D++ YG +S ++ V C+LDGEM+ +D N FG
Sbjct: 321 TINYWSRRATDYTYLYGQDLENGCISPHLKFVDAVQSCVLDGEMITYDPQRNAILPFGVL 380
Query: 320 QEIAKAARDGLSS-DRQLCY-----FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGR 373
+ A L S D Y FD+LY+ S+ +++L+ER + L+K++ S
Sbjct: 381 KGSALHELQRLESGDENKLYARPLFMVFDLLYLNGRSLANKALEERKKFLRKILNESPQF 440
Query: 374 LETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGD 433
+E + A D+++ +E EG+VLK + S ++
Sbjct: 441 VEIIEAKR-----------------ASTEDDIKLALTNAVEKGSEGVVLKQIKSHYQIDK 483
Query: 434 RSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVAL--AERPAPDTYPRRF 490
R+ +W+K+KPEY+ G ++D+++I GR + F L ++ D +F
Sbjct: 484 RTDQWVKIKPEYLEEFGENVDLVVI------GREKSKKDMFFCGLRVSDDDLDDDLKCKF 537
Query: 491 ISFCRVGTGLSDEELDAV----------VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERP 540
SFCRV G E + + K KP E+ KR PP + +
Sbjct: 538 WSFCRVANGFDKNEYREIERITQGKWKDINKEKPPASLIEFGKRVPPEWID------PKD 591
Query: 541 DVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELV 600
IE +SI SI+ + +T S Y+ ++R DK W + + +
Sbjct: 592 SFVIEVKARSIDRSISKNYKT--STTLYNAYN------RKIRDDKDWRTASTLDDYKHIK 643
Query: 601 HSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDM 660
S T+ K E + K K+ R E ++ I + D + + + IF +
Sbjct: 644 DSR--TSVKSTEQKLVS--KKKRLIRKRHRESQDEEI----WNDDDFNKMSKSSEIFEGL 695
Query: 661 VFCIL 665
F +L
Sbjct: 696 TFMVL 700
>gi|294659363|ref|XP_461730.2| DEHA2G04224p [Debaryomyces hansenii CBS767]
gi|199433905|emb|CAG90183.2| DEHA2G04224p [Debaryomyces hansenii CBS767]
Length = 941
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 156/592 (26%), Positives = 275/592 (46%), Gaps = 72/592 (12%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGG------ 97
D F A RLI P +R++ Y +K+ VLA +I + K+S D +L N++K
Sbjct: 66 DIFPAARLIFP--NRDKRLYFIKDVVLARLVIKMFNIPKNSIDYDKLFNYKKHYHDYMHL 123
Query: 98 ---AAPNAGNFPMVAAEVLQRRQG---MISGGLTIKELNDLLDRLASSE-NRAE-KISVL 149
A + + P++ ++++ R+ ++ TI ++N++LD L S E ++E +I +L
Sbjct: 124 NRYANKHLRSLPLIISQIISERRDPSKIVKSTFTINQINEILDELCSPEATKSEIQIGIL 183
Query: 150 STLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDR 209
+I+K +E++W +ILK L E F +HPDA LFN+ +L V L D
Sbjct: 184 KPVIEKLTIEEIRWFTTMILKKSILASFEVIFFRAWHPDAPRLFNICNNLSKVFWLLTDP 243
Query: 210 NQR--HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEI 267
+R + ++++ PQL+ ++ ++ E IE K DGDR+ +H ++
Sbjct: 244 EKRLDPDQLNVQLMYPFLPQLSQKLSISYDQLCNKMNNEFFIEEKMDGDRMIMHMENNKF 303
Query: 268 HYFSRSFLDHS-EYGH-----AMSKIIEQ--NVLVDRCILDGEMLVWDTSLNRFAEFGS- 318
+FSR D++ YG +++K + + V ILDGEM+ WD N FG+
Sbjct: 304 KFFSRRTKDYTLLYGSNLQIGSLTKHLRDAFDPKVKSIILDGEMVAWDYKRNLILPFGTL 363
Query: 319 -NQEIAKAARDGLSSD------RQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSK 371
+ +A R ++D + FD+L++ + L R +LL KV+ P
Sbjct: 364 KASAVQEAVRQFTTTDVFEQQSSWPLFIIFDILHLNGKDLTRYPLFYRKDLLHKVINPIP 423
Query: 372 GRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEP 431
+ E L Q C + ++++ + I R EGI++K+ S +
Sbjct: 424 HKFEIL------------QFIKC-----KDANDIKLAIRNIISERSEGIMVKNTKSNYHV 466
Query: 432 GDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRF 490
R+ W+K+KPEY+ + G +LD+++IG G ++ L + D F
Sbjct: 467 ASRNNCWIKIKPEYLEQFGENLDLVVIGIIPGIKN------SYICGLRDSDDNDI----F 516
Query: 491 ISFCRVGTGLSDEELDAV--VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE 548
SFC V G S+ E + + +T K EY KR PP + ++P WI P
Sbjct: 517 KSFCTVANGFSENEFNKIERLTTGK----WVEYKKRPPPD--DLLKFGTKKPTSWIH-PN 569
Query: 549 KSIILSITS-DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+S++L I + I ++ +L +R DK + +C+ + + E+
Sbjct: 570 ESVVLEIKARSIDCTYLSTYAVGTTLHNLYCRGIREDKSYDECITLNEYKEI 621
>gi|170582204|ref|XP_001896024.1| DNA ligase III [Brugia malayi]
gi|158596852|gb|EDP35124.1| DNA ligase III, putative [Brugia malayi]
Length = 607
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 136/475 (28%), Positives = 237/475 (49%), Gaps = 43/475 (9%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
+T + ++D L++L+ E+ S + K + E+K+II +I+KDL++ K +
Sbjct: 84 ITNQMVDDWLEKLSELTREKEQQMHFSEICKLVSCLELKYIIRLIMKDLRVNAGAKHMLE 143
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD-IEVGKAVRPQLAMRIGDAHAAWRKL 242
A ++F + +L+ V EK + ++ + I + ++P LA A K
Sbjct: 144 GLKKGAYEMFQNSRNLQGVIEKCQYADKEKLLESGIVLNIPIKPMLAEPCRSIKQAMEKC 203
Query: 243 HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDR-CI 298
+ KE+ E K+DG+R+Q+HK+GS+ +FSRS LDH ++KII + R I
Sbjct: 204 N-KEMYAEIKYDGERLQLHKDGSKFMFFSRSLKPTLDHKVVD--LNKIISEAFPTSRDLI 260
Query: 299 LDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKE 358
+D EML+ DT+ + FG+ + D +C F FD +Y S+I +SL+E
Sbjct: 261 VDAEMLLIDTNTGKPLPFGT----LGIHKKKQFKDAAVCLFVFDCIYYDSNSLIEKSLRE 316
Query: 359 RHELLQKVVKPSKGRLETLVPDHGLNS--HVRPQGEPCWSLVAHNVDEVEKFFKETIENR 416
R + L+ +K +P+ L S H+ +GE D++E +TI+
Sbjct: 317 RRKFLEDNMKE--------IPNRILLSSCHLIKKGEN---------DKLEILISKTIDEG 359
Query: 417 DEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAG---SDLDVLIIGGYYGSGRRGGEVAQF 473
EG+VLKDL S +EPG R WLK+K +Y++ G D++++G +YG G +GG ++ F
Sbjct: 360 LEGLVLKDLDSIYEPGKRH--WLKIKKDYLQGGDMADTADLILLGAFYGXGNKGGTMSVF 417
Query: 474 LVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVT 533
L+ + D ++F + + G G D L+ + +L+P K P + + +
Sbjct: 418 LMGVY-----DKEKQKFCTVTKCGNGHDDATLERINKELEPKMNKISRKYENLPEWIECS 472
Query: 534 NNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWH 588
+ PD + P++S + I T ++ S+RFPR+ ++R DK W
Sbjct: 473 RSL--VPDFIVMDPKESPVWEIAGAEFTRSDNHTASGISIRFPRVTKIRDDKNWE 525
>gi|406919253|gb|EKD57597.1| hypothetical protein ACD_57C00219G0003 [uncultured bacterium]
Length = 582
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 158/568 (27%), Positives = 260/568 (45%), Gaps = 85/568 (14%)
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGG 123
G+ ES++A + A SKD + ++L + GN + AA++ + + +
Sbjct: 59 GMAESMVAQSIGRAFNKSKD--EVIKLYRHK--------GNMGIAAAQLSTNAKRLTTKA 108
Query: 124 LTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
L++ E+ + L ++A + +K+S L+ ++K ++ +K ++ I L L+LGI + +
Sbjct: 109 LSVTEVFEELAKIAKFSGKGTVEQKVSTLAQVLKSLDSTSVKHVVNIPLGTLRLGIGDPT 168
Query: 181 IF----------HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ-DIEVGKAVRPQLA 229
+ + P E +N T DL V E + + R + +GK +RP LA
Sbjct: 169 VLDALSIAKTGDKKLRPMLEGAYNKTSDLGYVAENFFRKGEAGIRSVKLIIGKPIRPALA 228
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE 289
R+ +A A ++L G E E KFDG R+ +HKNG++I FSR+ D + HA ++E
Sbjct: 229 ERLPNAEEAVKRLGG-EFAAEPKFDGFRVAVHKNGNKIELFSRNLEDMT---HAFPDLVE 284
Query: 290 ---QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR----DGLSSDRQLCYFAFD 342
+ V IL+GE + ++ F F QE K R + ++ L FAFD
Sbjct: 285 GAVKEVKAKTAILEGEAIAYNPVTEEFLPF---QETTKRRRKYKIEEMAKQLPLVLFAFD 341
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
+LY+ + + +R +LL+ ++ H N VR E H
Sbjct: 342 LLYLNGKDITEKPYWQRRKLLESII-------------HSDNKVVRLAQERTL----HTA 384
Query: 403 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYY 461
E+ KFF E I EG++LK L S + G R W+K K +D +D +++G Y
Sbjct: 385 QEITKFFNEEISEGLEGLMLKKLNSPYVAGGRGFHWIKFKRSQAGELTDSVDCVLLGVYS 444
Query: 462 GSGRRGG-EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
G G+R V LV + D F++ RVGTGL+DEE K+K K +
Sbjct: 445 GRGKRTEFGVGGLLVGIY-----DAKRDEFVTISRVGTGLTDEEF----RKVKVISDKLQ 495
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA--------PYS 572
K+ NSK P W+E ++L I +D RS + +A ++
Sbjct: 496 VAKKP------ARVNSKIEPSFWVEP---KVVLEIYAD-EITRSPIHTAGWDSSTGSGFA 545
Query: 573 LRFPRIDRVR-YDKPWHDCLDVQSFVEL 599
LRFPR+ + R DK D V +++
Sbjct: 546 LRFPRLVKFREADKRPEDATTVSEIMKM 573
>gi|358336160|dbj|GAA54723.1| DNA ligase 3 [Clonorchis sinensis]
Length = 747
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 162/593 (27%), Positives = 264/593 (44%), Gaps = 80/593 (13%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKG-GAAPNA 102
D + RL+LP + Y LK+ L N + KD+ L + + AA
Sbjct: 52 DIYILFRLLLPK--ETKLVYKLKDKQLINLFSELFEADKDAM----LKDLEQAEDAATTI 105
Query: 103 GNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMK 162
G F + V + L++ E++ L LAS+ A+++ +L ++K+ +++
Sbjct: 106 GTFFAKSDAV----SPASNSSLSLTEVDRFLQDLASATKDADRLPLLKKIVKRCTVKDLV 161
Query: 163 WIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKL---------------- 206
++ II +DL++ K I HP A F + DLK V K+
Sbjct: 162 LLVRIIRQDLRINAGCKQILDGLHPQAYGAFQASRDLKAVVNKVLTATGTTSNTQTTGAK 221
Query: 207 KDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLH-GKEVVIECKFDGDRIQIHKNGS 265
K R I + ++P LA A A+ K E+ E K+DG+R+QIHK+G
Sbjct: 222 KPSMVRSVSTGIRLMTPIKPMLAEACRSAAQAFAKTEPDGELFAEIKYDGERVQIHKDGD 281
Query: 266 EIHYFSRSF--LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIA 323
+ +FSRS + ++ H I + + ++D E+L+ DT N+ FGS
Sbjct: 282 KFVFFSRSLKAVPTNKVSHVEPYIPKAFARAKQLVIDCEILLLDTKTNKPLPFGSLGVHK 341
Query: 324 KAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGL 383
+AA D +C F FD LY+ S+IH+ + R +L++ +P L
Sbjct: 342 RAA----FKDATVCIFVFDCLYLNGESLIHKPISSRRSVLEQYF--------CEIPHRVL 389
Query: 384 NS--HVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
S HV Q P +++ + + F E + EG+VLK S +EPG R WLK+
Sbjct: 390 LSEKHVI-QDIPSLNIL------MARVFSENL----EGLVLKPSHSTYEPGKR--HWLKI 436
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS +D++++G YYG+G + G ++ FL+ A D ++F + + G
Sbjct: 437 KRDYLAEGSMADSVDLIVLGAYYGTGNKAGLMSVFLMG-----AYDPASKQFTTVTKCGN 491
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G SDE L + KLK + PS+ V+ + PD +E P+ + + IT
Sbjct: 492 GFSDEMLQMLQKKLK----MKRITQSDVPSWLNVSKSLI--PDFVVEDPKSAPVWEITG- 544
Query: 559 IRTIRSEVFSAPY--------SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSS 603
R+ +A S+RFPR + R DK W +V LV S
Sbjct: 545 AEFSRASTHTAGLSSGEAQGISIRFPRFTKARPDKTWQQATNVSELQRLVAES 597
>gi|344234527|gb|EGV66395.1| ATP-dependent DNA ligase [Candida tenuis ATCC 10573]
Length = 903
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 155/609 (25%), Positives = 281/609 (46%), Gaps = 80/609 (13%)
Query: 25 AAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSK 82
+KKR +FL TY + D + ++RL+LP+ D + Y ++ + L + +I +
Sbjct: 44 TSKKRDIISRFLKTYKAHIGSDIYPSIRLVLPNKDSRK--YYMRHTELVSFIIKMYNIPN 101
Query: 83 DSADAVRLINWRKG-------GAAPNAGNFPMVAAEVLQRRQGM---ISGGLTIKELNDL 132
+S L W+ + PN + P +V+ R+ + I+ ++ ++N++
Sbjct: 102 ESNHTKLLREWKTQFHHLQLQNSDPNLSHLPRKICQVIGNRRSLQHKITKKYSVNQINEV 161
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDL 192
LD+L+++ ++I +L + E++W++ IILK G E+ +F ++ + L
Sbjct: 162 LDQLSNATKTEDRIKILRPVFDNLQIDEIRWLLNIILKISNAGYMERFVFELWNENCYGL 221
Query: 193 FNVTCDLKLVCEKLKDRNQRHKRQDI-EVGKAVRPQLAMRIGDAHAAWRKLHGK--EVVI 249
+ V DL + ++Q I V PQ + ++ A++ KL + E I
Sbjct: 222 YTVCHDLSKAFRYFSVHDSIDQKQLIPHVNFPFIPQASQKLT---ASYTKLCSEMSEFYI 278
Query: 250 ECKFDGDRIQIHKNGSEIHYFSRSFLDHS-------EYGHAMSKIIEQNVL---VDRCIL 299
E K DGDR+ +H N ++ +FSR D+S E G + +NV V + IL
Sbjct: 279 EEKIDGDRMVLHYNNNKFKFFSRRCRDYSLLFGENFEVGSLTKHL--KNVFHPKVTKLIL 336
Query: 300 DGEMLVWDTSLNRFAEFGSNQE--IAKAARDGLSSD---RQLCY---FAFDVLYVGDTSV 351
D E++ +D FG+ ++ I +A ++ ++D C+ FD+L V DTS+
Sbjct: 337 DCEIVAFDADRKCILPFGTLRKAAIQEAVKEFTTTDMFSEHGCWPYLLVFDILQVNDTSL 396
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
++ L +R L+K + RLE L + L +D +E K
Sbjct: 397 VNAPLYQRKLALEKAIIEVPNRLEILK----------------YKLCKDPID-IENAVKG 439
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEV 470
I +R EGI++K+ SK+ R W+K+KPEY+ + G +LD+++IG G
Sbjct: 440 VIVDRSEGIMVKNTMSKYHVAKRDNSWIKVKPEYLESFGENLDLVVIGVLPGIKN----- 494
Query: 471 AQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFY 530
++ L DT + SFC V G ++EE + +K R P
Sbjct: 495 -SYMCGLY-----DTETHMWRSFCTVANGFTNEEFAELDRLMKDKL------SRVCPENV 542
Query: 531 QVTNNSKERPDVWIESPEKSIILSITSDIRTIRS-EVFSAPYSLRFPRIDRVRYDKPWHD 589
+ +P ++ +PE+S++L I + + R+ E ++ +LR +R+DK W D
Sbjct: 543 MF---GRRKPQYYL-NPEESVVLEIKARVYDQRTDETYATNTTLRNLYCRGIRHDKSWDD 598
Query: 590 CLDVQSFVE 598
C+ QS+ E
Sbjct: 599 CISYQSYEE 607
>gi|156846774|ref|XP_001646273.1| hypothetical protein Kpol_1032p7 [Vanderwaltozyma polyspora DSM
70294]
gi|156116948|gb|EDO18415.1| hypothetical protein Kpol_1032p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 965
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 165/610 (27%), Positives = 279/610 (45%), Gaps = 76/610 (12%)
Query: 35 FLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLIN 92
F+D + +V D + AL L +P R+R Y +KES L + D L + K+S RL+
Sbjct: 78 FIDIWRRTVGNDIYPALILTIPY--RDRRMYNIKESKLIRIVCDYLKLPKNSETERRLMR 135
Query: 93 WRKGGAAPNAGNFPMVAAEVLQRRQGMISGGL--TIKELNDLLDRLASSE----NRAEKI 146
W+ A E +++R+G + TI +LN+ LD L ++++KI
Sbjct: 136 WKH--RADRNVRLSTFCVEEIKKRKGEPREKIKITIDKLNECLDNLVLERGYKGSKSQKI 193
Query: 147 SVLSTL---IKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVC 203
S T + E+K+ I+LKD +G E + +HPDA+D +V DLK+V
Sbjct: 194 SESETFKFCFENMTYVELKYFFDILLKDKIVGGLEHKFLNCWHPDAQDYLSVVSDLKIVS 253
Query: 204 EKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH 261
KL + R K D I + A P+ A R+ ++ + + IE K DG+RIQ+H
Sbjct: 254 SKLWNPEFRLKYDDLTINIDHAFTPETAKRLTYSYDTIARRLKNDFFIEEKMDGERIQLH 313
Query: 262 --KNGSEIHYFSRSFLDHSE-YGH-----AMSKIIEQNVLVDRCILDGEMLVWDTSLNRF 313
G+++ + SR LD+S YG A+ + + + V CILDGEM+ +D+ N
Sbjct: 314 YMNYGAKLKFLSRRGLDYSYLYGDNRNNGAIGRYLNFHKDVKECILDGEMVTYDSVKNCI 373
Query: 314 AEFG---SNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPS 370
FG S+ + + D Y AFD++Y+ +S+ L +R L K++ P
Sbjct: 374 LPFGLVKSSAMQSLSVSDIEPDGYHPLYMAFDLVYLNGSSLSTLPLHQRKNYLDKLLIPC 433
Query: 371 KGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWE 430
+E L H +S + ++ ++ IE EGI+LK S++
Sbjct: 434 PDFVEILPALHCNDSSL-----------------IKSSLEKAIELGSEGIILKRFDSQYL 476
Query: 431 PGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERP----APDT 485
RS W+K+KPEY+ + G ++D+++IG G++ + ++ P + D+
Sbjct: 477 VAKRSDDWIKIKPEYLEQFGENMDLIVIGR--DPGKKDSLMCGLILTGDNEPEEITSLDS 534
Query: 486 YP------------RRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVT 533
P R+ ISFC + G+S +E + ++ K++ PP +
Sbjct: 535 NPTDTAESFLKPDKRKIISFCNIANGISQKEFRDIDRYTFGHWIKFD--DELPPQ--DLF 590
Query: 534 NNSKERPDVWIESPEKSIILSITSDIRTIRSE-----VFSAPYSLRFPRIDRVRYDKPWH 588
+ P WI PE S++L I + R++ + + +L ++RYDK W
Sbjct: 591 EFGTKHPIEWI-YPEHSVVLEIKA--RSLETNESARIKYGTGSTLFGGYCRQIRYDKDWV 647
Query: 589 DCLDVQSFVE 598
C F+E
Sbjct: 648 SCFTYNEFME 657
>gi|366992884|ref|XP_003676207.1| hypothetical protein NCAS_0D02650 [Naumovozyma castellii CBS 4309]
gi|342302073|emb|CCC69846.1| hypothetical protein NCAS_0D02650 [Naumovozyma castellii CBS 4309]
Length = 950
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 161/607 (26%), Positives = 274/607 (45%), Gaps = 86/607 (14%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWR-KGGAAPNA 102
D F AL LILP R+R + +++ L + L + ++S RL++W+ + G
Sbjct: 75 DIFPALILILPY--RDRRLFNIRDYTLIKAICAYLKLPRNSFTEKRLLSWKARAGKGVKL 132
Query: 103 GNFPMVAAEVLQRR-QGMISGGLTIKELNDLLDRLASSENRA----EKISVLSTL---IK 154
F E+ +R+ + +TI LN+ LD+LA N +K++ T ++
Sbjct: 133 SQF--CVNEIKKRKSEPKDKIEITIDRLNECLDKLAEERNSKGRGFKKLADSPTFKFCLE 190
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHK 214
+ E+++ I+LK+ +G E + +HPDA+D +V DL+ V +L D R +
Sbjct: 191 NMSFIELQFFFDILLKNRVIGGQEHKFLNAWHPDAQDYLSVVSDLRTVTTRLWDPEIRLQ 250
Query: 215 RQDIEV--GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKN--GSEIHYF 270
D+ + G A PQLA ++ ++ + +IE K DG+RIQ+H G ++ +F
Sbjct: 251 NNDLVINPGFAFAPQLAKKLSISYEKICMKLKNDFIIEEKMDGERIQLHYQDYGEKLKFF 310
Query: 271 SRSFLDHSE-YGHAM-----SKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAK 324
SR D++ YG ++ K ++ N V CILDGEM+ +D + N FG + A+
Sbjct: 311 SRRGTDYTYLYGESIHDGFIGKHLKLNKDVKDCILDGEMITYDKTQNMILPFGLVKSSAR 370
Query: 325 A--ARDGLSSD-RQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ +DG+ ++ Q + FD++++ TS+ + L R E L + P +E L H
Sbjct: 371 SMLTKDGIMNEGYQPLFMVFDLIFMNGTSLANIPLNVRKEYLNGIFTPEPHIIELLSSYH 430
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
N D + K + I EGIVLK S++ R+ W+K+
Sbjct: 431 RFNE-----------------DSIRKSLELAISMGSEGIVLKRYDSRYTVASRNDDWIKV 473
Query: 442 KPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALA---------------------- 478
KPEY+ + G ++D+++IG R G+ + LA
Sbjct: 474 KPEYLEQFGENMDLIVIG------RDPGKKDSLMCGLAVVEEDEKADLNENNDDNVIILD 527
Query: 479 -ERPAPDTYPR---RFISFCRVGTGLSDEELDAVVTKLKPYF-RKYEYPKRAPPSFYQVT 533
+ AP R +F+SFC + GLS EE + K + + R E P P + Q
Sbjct: 528 DDEDAPVEQERTIHKFVSFCVIANGLSQEEFKQIDRKTRGLWNRSDEIP--PPDTLLQF- 584
Query: 534 NNSKERPDVWIESPEKSIILSITS---DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDC 590
P WI+ P+KS+++ + + D F+ +L +R DK W C
Sbjct: 585 --GTRLPIEWID-PKKSVVIEVKARSIDAAESNGRKFATGCTLYGGYCRGIREDKDWQTC 641
Query: 591 LDVQSFV 597
+ F+
Sbjct: 642 YTLSEFL 648
>gi|443717140|gb|ELU08334.1| hypothetical protein CAPTEDRAFT_213234 [Capitella teleta]
Length = 841
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 152/576 (26%), Positives = 268/576 (46%), Gaps = 75/576 (13%)
Query: 63 YGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISG 122
Y L L G S++ + + KG AA F + ++L ++ ++S
Sbjct: 190 YNLNSKQLVKIFSQIFGCSQEEM----VEDLEKGDAAETVRVFFEQSKKILPTKKSLLS- 244
Query: 123 GLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
I+++++ L+ L+ +++ VL + K+ A ++K ++ +I DL++ K I
Sbjct: 245 ---IQDVDESLNDLSQYTKEDDQMKVLMNITKRCTANDLKMVVRLIKHDLRISAGAKHIL 301
Query: 183 HEFHPDAEDLFNVTCDLKLVCEK---LKDRNQRHKRQD-----IEVGKAVRPQLAMRIGD 234
+A + F + DLK V ++ LK+ K + AV+P LA
Sbjct: 302 DGLDANAYEAFKASRDLKDVVDRVFSLKEEGSAGKLTKSLSIRANLMTAVQPMLAEACKS 361
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A+++ + E K+DG+R+Q+HK GS+ YFSRS L H + H I +
Sbjct: 362 VDFAFKRCPNG-MYAEIKYDGERVQVHKQGSQFQYFSRSLKPVLPH-KVNHFKDYIPKAF 419
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ DT ++ FGS K A D +C F FD ++ S+
Sbjct: 420 PGGSDLILDSEVLLIDTQTSKPLPFGSLGVHKKQA----FKDASVCLFIFDCIHYNGESL 475
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L+ER ++L++ + T +P+H + S ++ +P D++ + +
Sbjct: 476 MLKPLRERRKILKENM--------TEIPNHIMFSEMKEISKP---------DDLSEMMMQ 518
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
EG+VLKD +EPG R WLK+K +Y+ G+ D++++G Y+G+G +GG
Sbjct: 519 VFREGLEGLVLKDAKGIYEPGKRH--WLKVKKDYLAEGAMADSADLVVLGAYFGTGVKGG 576
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ + D+ ++ S + G D++LD + +L +Y + PS
Sbjct: 577 LMSVFLMGVY-----DSNTEKWCSVTKCHLGFDDDKLDKLQKQLDVVKISKDYSR--VPS 629
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSIT------SDIRTIRSEVFSAPYSLRFPRIDRVR 582
+ + N + PD ++ P+KS + IT +DI T + S+RFPR +VR
Sbjct: 630 WLNI--NRQLAPDFVVKDPKKSPVWEITGAEFSKADIHT------AGGISIRFPRCTKVR 681
Query: 583 YDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQD 618
DK W + D+ EL +K KEY L D
Sbjct: 682 NDKSWKEATDLTRLRELF-------RKSKEYSDLPD 710
>gi|444321829|ref|XP_004181570.1| hypothetical protein TBLA_0G01040 [Tetrapisispora blattae CBS 6284]
gi|387514615|emb|CCH62051.1| hypothetical protein TBLA_0G01040 [Tetrapisispora blattae CBS 6284]
Length = 972
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 178/675 (26%), Positives = 302/675 (44%), Gaps = 93/675 (13%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWR-KGGAAPNA 102
D F ALRLILP R+R Y +K+ L + L + K+S RLI W+ K
Sbjct: 85 DIFPALRLILPY--RDRRVYNIKDLTLIRAICSYLKLPKNSVVERRLIRWKYKADRYETL 142
Query: 103 GNFPMVAAEVLQRR---QGMISGGLTIKELNDLLDRLA------SSENRAE--KISVLST 151
F + E+ +R+ Q ++I +LN++LD L +++ R+ ++
Sbjct: 143 ATFCI--HEISKRKNEPQVTQVERISIDKLNEILDDLVVNRQNWNNKKRSNLLQVETFKF 200
Query: 152 LIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQ 211
++ E+K+ II+K+ LG E +HPD+++ +V DL+ + KL + +
Sbjct: 201 CLENMTFIELKYFFDIIVKNKILGSLENMFLKIWHPDSKEYLSVVSDLRTLSNKLWNPSI 260
Query: 212 RHKRQD--IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEI 267
+ D I+VG PQLA R+ ++ + IE K DG+RIQ+H G +
Sbjct: 261 KINNSDLSIKVGYIFAPQLAKRLMLSYDTISNRLNNDFFIEEKMDGERIQLHYMNYGETV 320
Query: 268 HYFSRSFLDHSE-YGH-----AMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+FSR D++ YG+ ++K + + V C+LDGEM+ +D++ + FG +
Sbjct: 321 KFFSRHGTDYTYLYGNDKSAGTIAKFLRLHKNVKECVLDGEMVTFDSTSKKVLPFGLVKS 380
Query: 322 IAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLV 378
A + + D + FD+LY+ +S+I L +R E L V+ P K +E L
Sbjct: 381 SASSQLNKKDIDNDSFHPLFMVFDILYLNGSSLIDLPLFKRKEFLNTVLTPYKDYVEIL- 439
Query: 379 PDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKW 438
S +R C + +++K I EGIVLK SK+ P R W
Sbjct: 440 ------SSIR-----CTDSI-----QIKKGLDAAISVGSEGIVLKQYISKYIPNARHNNW 483
Query: 439 LKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVA-----LAERPAP--------- 483
+K+KPEY+ G ++D+++IG SG++ + LV L+E
Sbjct: 484 IKVKPEYLEEFGENMDLIVIGR--DSGKKDCLICGILVTEEKQELSENMKRESEIEIISD 541
Query: 484 ------DTYP----RRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVT 533
DT P ++ ISFC + GLS EL + + ++ Y PP V
Sbjct: 542 SGDDDLDTKPSQGIKKVISFCTIANGLSQNELKEINRITRGAWKNYN--NETPP--IDVL 597
Query: 534 NNSKERPDVWIESPEKSIILSIT--SDIRTIRSEV-FSAPYSLRFPRIDRVRYDKPWHDC 590
++P WI P+ S++L I S RT +++ ++ +L ++R DK W C
Sbjct: 598 EFGTKKPVEWI-YPQDSVVLEIKARSLDRTDQTQYKYATGCTLYGGYCRQIRQDKDWTSC 656
Query: 591 LDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDI 650
+ T + K + +K RS + + K +S P+ L +D+
Sbjct: 657 YTLHDL---------TYNEIKRHEKKNKNKQTLIRSYSRKKSKIIS--PAGMLPNG-TDL 704
Query: 651 KGETSIFSDMVFCIL 665
+ + +F + F I+
Sbjct: 705 RLISDLFHGLYFYII 719
>gi|91076374|ref|XP_967954.1| PREDICTED: similar to rCG33581 [Tribolium castaneum]
gi|270002897|gb|EEZ99344.1| ligase III [Tribolium castaneum]
Length = 853
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 140/511 (27%), Positives = 240/511 (46%), Gaps = 46/511 (9%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LT++++++ L L + E+ + L T K A ++K +I +I DL++ K I
Sbjct: 255 LTLQQVDEFLQDLTNLTKEEEQTAHLKTFASKCTANDLKIVIRLIKHDLRMNAGAKHILD 314
Query: 184 EFHPDAEDLFNVTCDLKLVCEK-LKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
HPDA F + D+K V ++ LKD+ + + IE+ V P LA A +K
Sbjct: 315 GVHPDAYQAFQSSRDIKAVIDRCLKDKGTKAR---IELMTPVLPMLAEACKSVEQAMKKC 371
Query: 243 HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCIL 299
+ E K+DG+R+Q+HK GSE YFSRS L H + H + I + IL
Sbjct: 372 PNG-MYSEIKYDGERVQVHKQGSEFKYFSRSLKPVLPH-KVAHFKNYIPQAFPHGTDLIL 429
Query: 300 DGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKER 359
D E+L+ DT + FG+ + D +C F FD +Y + + + R
Sbjct: 430 DSEILMIDTQTGKPLPFGT----LGIHKKSEFKDASVCLFVFDCIYYNGDVLTDKPISFR 485
Query: 360 HELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEG 419
++L++ + T +P+H + S + H+ +++ + + ++ EG
Sbjct: 486 KKILKENM--------TEIPNHIVFSEMEE---------IHDPNDLTQMIAKVLKLGLEG 528
Query: 420 IVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVA 476
+VLKD+ S +EPG R WLK+K +Y+ G+ D++++G +YG+G++GG ++ FL+
Sbjct: 529 LVLKDITSVYEPGKRH--WLKVKKDYLFGGAMADSADLIVLGAWYGTGKKGGIMSIFLMG 586
Query: 477 LAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNS 536
D RF + +V TG D+ L+ + T+L + P + P +
Sbjct: 587 CY-----DEANDRFCTVSKVSTGHDDKTLEKLQTELD-MVKISSDPAKVPDWLHCTKTMV 640
Query: 537 KERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPWHDCLDVQS 595
PD P+K + IT T + EV +A S+RFPR+ ++R DK W ++
Sbjct: 641 ---PDFVARDPKKQPVWEITGAEFT-KHEVHTADGISIRFPRVTKIRDDKCWQSATSLKE 696
Query: 596 FVELVHSSNGTTQKGKEYGGLQDDKPKQFRS 626
L S T G + PK+ ++
Sbjct: 697 LKVLFAKSKEHTDVSLLLQGTAESSPKKQKT 727
>gi|161528545|ref|YP_001582371.1| ATP-dependent DNA ligase I [Nitrosopumilus maritimus SCM1]
gi|224487905|sp|A9A3K1.1|DNLI_NITMS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|160339846|gb|ABX12933.1| DNA ligase I, ATP-dependent Dnl1 [Nitrosopumilus maritimus SCM1]
Length = 588
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 156/543 (28%), Positives = 254/543 (46%), Gaps = 76/543 (13%)
Query: 79 GMSKDSADAVRLIN--WRKGGAAPNAGNFPMVAAEVLQRRQ--GMISGGLTIKELNDLLD 134
+SK S ++ I +RKGG +A A +L+++ + +T++ + + L
Sbjct: 68 AISKSSGIPIKKIEEEYRKGGDLGHA------ATTILEQKTQTTFLVEDITVERVYETLF 121
Query: 135 RLASSE-NRAE--KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF--------- 182
++A E NR++ K+ +S+L+ + E +I+ I+L L+LGI+E ++
Sbjct: 122 KIAKLEGNRSQDMKMKYISSLLNDASPLEASFILKILLGTLRLGIAENTVMDALALAFSG 181
Query: 183 -HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRH-KRQDIEVGKAVRPQLAMRIGDAHAAWR 240
E E +NV+ DL V E L ++ I + +RP LA R+ A
Sbjct: 182 NKENRKILEHAYNVSSDLGKVAEVLATEGLAEVEKFKIILFNPIRPMLADRVKSEQEAIE 241
Query: 241 KLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILD 300
K+ G E E K DG+R+Q+H G ++ FSRS + S Y + + I + + + +L+
Sbjct: 242 KM-GNEFAAEYKLDGERVQLHIEGDKVVLFSRSLENISSYYPDIIEKIPKTIQAENIVLE 300
Query: 301 GEMLVWDTSLNRFAEFGSNQEIAKAAR----DGLSSDRQLCYFAFDVLYVGDTSVIHQSL 356
E + + + F F QE+ R + + + FD+LY S +
Sbjct: 301 AEAVAINENTGEFLPF---QELMHRRRKYKIEKAVTQYPITVNLFDILYCNGKSCLELDY 357
Query: 357 KERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENR 416
KER E ++KVVK + H+ P + N +++E FF+ +I
Sbjct: 358 KERREKMEKVVK-----------EDDFVKHI-PMA------IVKNENDIEDFFENSINAG 399
Query: 417 DEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLV 475
EG++LK L S ++ G R WLKLK EY G LD+++IGG++G GRR G L+
Sbjct: 400 SEGLMLKTLVSPYQAGSRGSHWLKLKREYQNELGDSLDLVVIGGFFGKGRRTGNYGTLLL 459
Query: 476 ALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNN 535
A E DT F S C+VGTG SDE+LD + L P + P+ N
Sbjct: 460 ATYEED-EDT----FTSICKVGTGFSDEDLDQLYQILNPKVTIKKNPRI----------N 504
Query: 536 SKERPDVWIESPEKSIILSITSDI------RTIRSEVF-SAPYSLRFPRID-RVRYDKPW 587
S+ DVW E PE +I + S+I + R ++ A +LRFP+ ++R +K
Sbjct: 505 SEMEADVWFE-PE-LVIEVVASEITLSPIHKAARDKIRKGAGLALRFPKFTGKMRVEKMA 562
Query: 588 HDC 590
D
Sbjct: 563 EDA 565
>gi|47506906|gb|AAH70993.1| LOC398275 protein [Xenopus laevis]
Length = 933
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 151/549 (27%), Positives = 249/549 (45%), Gaps = 51/549 (9%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI E++DLL RL+ ++ +VL + ++ + ++K II ++ DLK+ K +
Sbjct: 282 LTIHEVDDLLTRLSKMTKEEDQQNVLEDIARRCTSNDLKCIIRLVKHDLKMNSGAKHVLD 341
Query: 184 EFHPDAEDLFNVTCDLKLVCEK-LKDRNQ-----RHKRQDIEVGKAVRPQLAMRIGDAHA 237
P+A D F + +L V E+ L++ Q R + V+P LA
Sbjct: 342 ALDPNAYDAFKASRNLGDVVERVLRNEQQAPGMKRTLSVQASLMTPVQPMLAEACKSIEY 401
Query: 238 AWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQNVLV 294
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 402 AMKKCPNG-MYAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDFIPKAFPGG 459
Query: 295 DRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQ 354
+ ILD E+L+ DT+ + FG+ KAA D +C F FD +Y S++ +
Sbjct: 460 NSMILDAEVLLIDTNTGKPLPFGTLGVHKKAA----FKDASVCLFVFDCIYFNGVSLMDR 515
Query: 355 SLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIE 414
L ER + +++ + +P+H + S ++ + A D + + +E +
Sbjct: 516 PLNERRKFMRENM--------VEIPNHIMFSEMKH-----VTKAADLADMITRVIREGL- 561
Query: 415 NRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVA 471
EG+VLKD+ S +EPG R WLK+K +Y+ G+ D+ ++G YYG G GG ++
Sbjct: 562 ---EGLVLKDIKSNYEPGKRH--WLKVKKDYLNEGAMADTADLAVLGAYYGKGANGGIMS 616
Query: 472 QFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQ 531
FL+ D + + + + +G D L + +L + + P + PS+ +
Sbjct: 617 IFLMGCY-----DPEGQHWCTVTKCSSGYDDATLQRLQKELN-MVKISKDPSKI-PSWLK 669
Query: 532 VTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCL 591
+ N PD I+ P+K+ I IT + + S+RFPR R R DK W
Sbjct: 670 INKNY--FPDFIIQDPKKAPIWEITGAEYSKAEAHTAGGLSIRFPRCTRFRDDKDWKTAT 727
Query: 592 DVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQT-----D 646
+Q EL S + QD+ SSR+ E + ++T
Sbjct: 728 TLQQLKELYRLSKEKSDFNITATSSQDEDGSSECSSRENEGNSTQTSSGSLVKTIKNVPS 787
Query: 647 VSDIKGETS 655
S KG+TS
Sbjct: 788 KSPAKGKTS 796
>gi|73669153|ref|YP_305168.1| DNA ligase (ATP) [Methanosarcina barkeri str. Fusaro]
gi|121725644|sp|Q46C04.1|DNLI1_METBF RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 1
gi|72396315|gb|AAZ70588.1| DNA ligase (ATP) [Methanosarcina barkeri str. Fusaro]
Length = 549
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 137/483 (28%), Positives = 237/483 (49%), Gaps = 74/483 (15%)
Query: 141 NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFH----------PDAE 190
++ EK +LS+++++ + +E K+I+ I+L L+LG ++ + F +
Sbjct: 93 SQEEKTGLLSSILQRASPKEGKYIVRIVLGKLRLGFGDQFLLEAFSIAFTGDKKYVVKIK 152
Query: 191 DLFNVTCDLKLVCEKLKDRNQRHKRQ-DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVI 249
+ ++V D+ + E L ++ + I++G+ VR LA R+ ++ GK+
Sbjct: 153 ESYSVCTDIGELAESLAEQGPKALGHFSIKLGRPVRSMLAQRVKTFEELEERIPGKKAA- 211
Query: 250 ECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVW--- 306
E K+DG+R+QIHKNG EI FSR D + + + + + +L + +LDGE++ +
Sbjct: 212 EEKYDGERVQIHKNGEEIKAFSRRLEDITAQYPDVIEAVRKGILAKKIVLDGEIIAYVEG 271
Query: 307 DTSLNRFAEFGSNQEIAKAARD-GLSSDRQLC---YFAFDVLYVGDTSVIHQSLKERHEL 362
+ + EF S Q + K R + ++C F FD+LY+ S++ + ER +
Sbjct: 272 GKANDSTGEFYSFQRLMKRRRKYEVQKYTEICPVAVFFFDILYLEGNSLLKKPYPERRAI 331
Query: 363 LQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVL 422
L++ VK S E L H+ +V N++E+E FF E +E R EGI++
Sbjct: 332 LEEHVKES----EIL--------HL------ARRIVTDNLEEIEDFFNEALEKRLEGIII 373
Query: 423 KDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAE 479
K +G S +E G RS WLK K EY + D+ IIG YYG G+R G L A+
Sbjct: 374 KSMGRNSAYEAGKRSWFWLKWKEEYASGMRETFDLAIIGKYYGRGKRKGSFGALLCAIL- 432
Query: 480 RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKER 539
+ +RF +F +VGTG ++ + + + L + E PK V S+
Sbjct: 433 ----NGEEQRFETFTKVGTGFTEADAKEIDSLLSEHIIS-EVPK-------NVLIKSRML 480
Query: 540 PDVWIESPEKSIILSITSDIRTIRSEVFSAP------------YSLRFPRIDRVRYDKPW 587
PD+++E S+++ + + SE+ +P +LRFPR R+R+DK
Sbjct: 481 PDIFVEP---SLVIEV------LGSEITESPSHTAGQGEGDTGLALRFPRFLRIRHDKGP 531
Query: 588 HDC 590
+D
Sbjct: 532 YDI 534
>gi|255724178|ref|XP_002547018.1| ATP-dependent DNA ligase [Candida tropicalis MYA-3404]
gi|240134909|gb|EER34463.1| ATP-dependent DNA ligase [Candida tropicalis MYA-3404]
Length = 937
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 160/650 (24%), Positives = 296/650 (45%), Gaps = 95/650 (14%)
Query: 27 KKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
KK +KF+D + + D + +++LI P ++ Y +KE LA LI + KDS
Sbjct: 57 KKSFIIKKFIDVFRTHIGQDIYPSVKLIFP--EKVGRLYFIKEIALARLLIRMYKIPKDS 114
Query: 85 ADAVRLINWRKGGA--------APNAGNFPMVAAEVLQRRQGMISGG--LTIKELNDLLD 134
D L NW + + P+ A+ ++ +R+ + T++++N +LD
Sbjct: 115 DDYKLLHNWNQQYQRSKRFVVDEKKIRDLPLQASRIIGKRRPYVEKPKEFTVQQINSILD 174
Query: 135 RLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFN 194
+L ++ +++ +L ++ + E++W+I I+LK L E+ F+++HPD +F
Sbjct: 175 QLTMAKMSQDQMEILKPVLDELGISEVRWLIHIVLKKTILSNMERVFFNDWHPDGYRVFT 234
Query: 195 VTCDLKLVCEKLKDRNQRHKRQDIEVGK--AVRPQLAMRIGDAHAAW-RKLHGK------ 245
+ DL+ + + +R + + +PQLA ++ ++ +KL K
Sbjct: 235 ICNDLQKAFQFSTNPEERLDSSQLNIHPLFKFKPQLAEKLTSSYNNLVKKLQNKHEMDPP 294
Query: 246 ------------EVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGHA-----MSKI 287
+ IE K DGDR+ +HK+G +FSR D+S YG + ++K
Sbjct: 295 YEAKFKEMDLQDKFYIEEKMDGDRMLLHKDGDSFKFFSRKLKDYSFLYGESFQLGSLTKY 354
Query: 288 IEQNVL--VDRCILDGEMLVWDTSLNRFAEFGS--NQEIAKAARDGLSSDRQL------C 337
+ V ILDGEM+ +D N FG+ + I ++ R + D+
Sbjct: 355 LRHAFAGNVKSVILDGEMVAYDYERNAILPFGTLKSSAIQESVRQFTTIDQYQQQTSYPY 414
Query: 338 YFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSL 397
Y FD+LY+ + + L R +L ++++P R E V D L S PQ
Sbjct: 415 YLVFDILYLNGKDLTNYPLFFRKNILNRIIRPVPHRFE--VHDARLGSS--PQ------- 463
Query: 398 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWE-PGDRSGKWLKLKPEYI-RAGSDLDVL 455
++E+ +E + +R EG+VLK++ SK+ G R+ W+K+KPEY+ + G +LD++
Sbjct: 464 ------DIERAIREVVSSRSEGLVLKNVQSKYAIDGFRNPDWIKVKPEYLEKFGENLDLV 517
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAV--VTKLK 513
+IG + ++ L + + SFC G+ +E D + +T K
Sbjct: 518 VIG------KIPAIKNSYMCGLKS-----SVDGVYYSFCVCANGIEIDEFDKIERITHGK 566
Query: 514 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS-DIRTIRSEVFSAPYS 572
E P + F + P WI P+ S++L I + I + + ++ +
Sbjct: 567 WIKTDDEMPPESLIKF------GTKLPTYWIH-PKDSLVLEIRARSIDARKEKTYAVGTT 619
Query: 573 LRFPRIDRVRYDKPWHDCLDVQSFVEL-VHSSNGTTQKGKEYG---GLQD 618
L ++R DKP +C+ +++++E+ + SN + G GL D
Sbjct: 620 LHCNHCRKIRDDKPIDECITLENYLEMKANYSNDLSHAQNALGKKRGLSD 669
>gi|147901021|ref|NP_001082183.1| ligase III, DNA, ATP-dependent [Xenopus laevis]
gi|18029882|gb|AAL56552.1|AF393654_1 DNA ligase III isoform alpha [Xenopus laevis]
Length = 988
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 151/549 (27%), Positives = 249/549 (45%), Gaps = 51/549 (9%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI E++DLL RL+ ++ +VL + ++ + ++K II ++ DLK+ K +
Sbjct: 337 LTIHEVDDLLTRLSKMTKEEDQQNVLEDIARRCTSNDLKCIIRLVKHDLKMNSGAKHVLD 396
Query: 184 EFHPDAEDLFNVTCDLKLVCEK-LKDRNQ-----RHKRQDIEVGKAVRPQLAMRIGDAHA 237
P+A D F + +L V E+ L++ Q R + V+P LA
Sbjct: 397 ALDPNAYDAFKASRNLGDVVERVLRNEQQAPGMKRTLSVQASLMTPVQPMLAEACKSIEY 456
Query: 238 AWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQNVLV 294
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 457 AMKKCPNG-MYAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDFIPKAFPGG 514
Query: 295 DRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQ 354
+ ILD E+L+ DT+ + FG+ KAA D +C F FD +Y S++ +
Sbjct: 515 NSMILDAEVLLIDTNTGKPLPFGTLGVHKKAA----FKDASVCLFVFDCIYFNGVSLMDR 570
Query: 355 SLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIE 414
L ER + +++ + +P+H + S ++ + A D + + +E +
Sbjct: 571 PLNERRKFMRENM--------VEIPNHIMFSEMKHVTK-----AADLADMITRVIREGL- 616
Query: 415 NRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVA 471
EG+VLKD+ S +EPG R WLK+K +Y+ G+ D+ ++G YYG G GG ++
Sbjct: 617 ---EGLVLKDIKSNYEPGKRH--WLKVKKDYLNEGAMADTADLAVLGAYYGKGANGGIMS 671
Query: 472 QFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQ 531
FL+ D + + + + +G D L + +L + + P + PS+ +
Sbjct: 672 IFLMGCY-----DPEGQLWCTVTKCSSGYDDATLQRLQKELN-MVKISKDPSKI-PSWLK 724
Query: 532 VTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCL 591
+ N PD I+ P+K+ I IT + + S+RFPR R R DK W
Sbjct: 725 INKNY--FPDFIIQDPKKAPIWEITGAEYSKAEAHTAGGLSIRFPRCTRFRDDKDWKTAT 782
Query: 592 DVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQT-----D 646
+Q EL S + QD+ SSR+ E + ++T
Sbjct: 783 TLQQLKELYRLSKEKSDFNITATSSQDEDGSSECSSRENEGNSTQTSSGSLVKTIKNVPS 842
Query: 647 VSDIKGETS 655
S KG+TS
Sbjct: 843 KSPAKGKTS 851
>gi|407462665|ref|YP_006773982.1| ATP-dependent DNA ligase I [Candidatus Nitrosopumilus koreensis
AR1]
gi|407046287|gb|AFS81040.1| ATP-dependent DNA ligase I [Candidatus Nitrosopumilus koreensis
AR1]
Length = 588
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 156/541 (28%), Positives = 254/541 (46%), Gaps = 72/541 (13%)
Query: 79 GMSKDSADAVRLIN--WRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRL 136
+SK S V+ I +RK G +A + + + + +T++ + + L ++
Sbjct: 68 AISKSSGIPVKKIEDEYRKSGDLGHAATIILEQ----KTQTTFLVEDITVERVYETLFKI 123
Query: 137 ASSE-NRAE--KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF----------H 183
A SE NR++ K+ +S+L+ + E +I+ I+L L+LGI+E ++
Sbjct: 124 AKSEGNRSQDMKMKYISSLLNDASPLEASFILKILLGTLRLGIAENTVMDALAMAFSGNK 183
Query: 184 EFHPDAEDLFNVTCDLKLVCEKL-KDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
E E +NV+ DL V E L K+ + ++ I + +RP LA R+ A K+
Sbjct: 184 ENRKVLEHAYNVSSDLGKVAEILAKEGLEEVEKLKIILFNPIRPMLADRVKSEQEAIEKM 243
Query: 243 HGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGE 302
G+ E K DG+R+Q+H G ++ FSRS + S Y + + I + + + IL+ E
Sbjct: 244 -GESFAAEYKLDGERVQLHVEGDKVVLFSRSLENISSYYPDIIEKIPKTIQAENIILEAE 302
Query: 303 MLVWDTSLNRFAEFGSNQEIAKAAR----DGLSSDRQLCYFAFDVLYVGDTSVIHQSLKE 358
+ + + F F QE+ R + + + FD+LY S + + KE
Sbjct: 303 AVAINENTGEFLPF---QELMHRRRKYKIEKAVTQYPITVNLFDILYCNGKSCLELAYKE 359
Query: 359 RHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDE 418
R E L+KVVK + H+ P + N +++E FF+ +I E
Sbjct: 360 RREKLEKVVK-----------EDDFVKHI-PMA------IVKNENDIEDFFENSINAGSE 401
Query: 419 GIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVAL 477
G++LK L ++ G R WLKLK EY G LD+++IGG++G GRR G L+A
Sbjct: 402 GLMLKMLDKPYQAGSRGSHWLKLKREYQNELGDSLDLVVIGGFFGKGRRTGSYGTLLLAT 461
Query: 478 AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSK 537
E DT F S C+VGTG SDE+LD + L P + P+ +S+
Sbjct: 462 YEED-EDT----FTSICKVGTGFSDEDLDQLYQILNPKVTIKKNPRI----------DSE 506
Query: 538 ERPDVWIESPEKSIILSITSDI------RTIRSEVF-SAPYSLRFPRID-RVRYDKPWHD 589
DVW E PE +I + S+I + R +V A +LRFP+ ++R +K D
Sbjct: 507 MEADVWFE-PE-LVIEVVASEITLSPIHKAARDKVRKGAGLALRFPKFTGKIRVEKMAED 564
Query: 590 C 590
Sbjct: 565 A 565
>gi|282165841|ref|NP_001016351.2| DNA ligase (ATP) 3 [Xenopus (Silurana) tropicalis]
gi|195539958|gb|AAI67946.1| Unknown (protein for MGC:136050) [Xenopus (Silurana) tropicalis]
Length = 893
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 140/488 (28%), Positives = 225/488 (46%), Gaps = 46/488 (9%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI E++DLL +L+ ++ +VL + + + ++K II +I DLK+ K +
Sbjct: 336 LTIHEVDDLLTKLSKMTKEEDQQNVLEDIAHRCTSNDLKCIIRLIKHDLKMNSGAKHVLD 395
Query: 184 EFHPDAEDLFNVTCDLKLVCEK-LKDRNQ-----RHKRQDIEVGKAVRPQLAMRIGDAHA 237
P+A D F + +L V E+ L++ Q R + V+P LA
Sbjct: 396 ALDPNAYDAFKASRNLGDVVERVLRNEQQAPGMKRTLSVQASLMTPVQPMLAEACKSIEY 455
Query: 238 AWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQNVLV 294
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 456 AMKKCPNG-MYAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDFIPKAFPGG 513
Query: 295 DRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQ 354
+ ILD E+L+ DT+ + FG+ KAA D +C F FD +Y S++ +
Sbjct: 514 NSMILDAEVLLIDTNTGKPLPFGTLGVHKKAA----FKDANVCLFVFDCIYFNGVSLMDR 569
Query: 355 SLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIE 414
L ER + ++ + +P+H L S ++ + + D + + +E +
Sbjct: 570 PLSERRKFMRDNM--------VEIPNHILFSEMKHVTK-----ASDLADMITRVIREGL- 615
Query: 415 NRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVA 471
EG+VLKDL S +EPG R WLK+K +Y+ G+ D+ ++G YYG G GG ++
Sbjct: 616 ---EGLVLKDLKSNYEPGKRH--WLKVKKDYLNEGAMADTADLAVLGAYYGKGANGGIMS 670
Query: 472 QFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQ 531
FL+ D +++ + + +G D L + +L K PS+ +
Sbjct: 671 IFLMGCY-----DPESQKWCTVTKCSSGYDDATLQRLQKELN--MVKISKDPSKIPSWLK 723
Query: 532 VTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCL 591
+ N PD I P+K+ I IT + +A S+RFPR R R DK W
Sbjct: 724 INKNY--FPDFIIHDPKKAPIWEITGAEYSKAEAHTAAGLSIRFPRCTRFRDDKDWKTAT 781
Query: 592 DVQSFVEL 599
+Q EL
Sbjct: 782 TLQQLKEL 789
>gi|326427734|gb|EGD73304.1| hypothetical protein PTSG_05019 [Salpingoeca sp. ATCC 50818]
Length = 660
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 187/362 (51%), Gaps = 46/362 (12%)
Query: 317 GSNQEIAKAARDGLSSDRQ----LCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKG 372
G N ++ R G++ DR CY FD++ + + L+ER E+L +++ P
Sbjct: 15 GDNFDVKALGRPGVTRDRYPTAIQCYIVFDLVLLNGEPWYDRPLRERKEMLARIITPDNE 74
Query: 373 RLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPG 432
R+ ++ D+ + + D+ KF I+ R+EG+++KDL SK+ G
Sbjct: 75 RI--ILADYK---------------IGRSNDDFLKFANAAIDEREEGVMIKDLDSKYLLG 117
Query: 433 DRSGKWLKLKPEYIRAGSDLDVLII-GGYYGSG-RRGGEVAQFLVALAERPAPDTYPRRF 490
R W+K KPEY+ +D L++ GGY+G G RR G ++ FL+A+AE P P P F
Sbjct: 118 RRDKAWMKWKPEYVDTLADDLDLLVVGGYHGEGTRRSGGISHFLLAVAEPPQPGEKPTMF 177
Query: 491 ISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR----------APPSFYQVTNNSKERP 540
+FC+VGTG S ++L + +L+P+++ + R A P F KE+P
Sbjct: 178 NTFCKVGTGYSLKQLREIQARLRPHWKTFNTDPRNMSMSRKVRLAMPGF-------KEKP 230
Query: 541 DVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELV 600
DVWIE PE+SII+ + + +E F+A ++LRFPR+ R R DK W +C+ + L
Sbjct: 231 DVWIE-PEESIIVQVKA-AEICPTEKFAARFTLRFPRLQRFRLDKNWWECMLQTELMPLY 288
Query: 601 HSSNG-TTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSI-VPSHFLQTDVSDIKGETSIFS 658
++G + E D K +++ ++ S V HF D+SDIK ++ IFS
Sbjct: 289 DRASGKIAHRALEDHHFNADNGKL--KAKRAKRTTASFRVAEHFKAADLSDIKEKSKIFS 346
Query: 659 DM 660
+
Sbjct: 347 GL 348
>gi|150863848|ref|XP_001382465.2| hypothetical protein PICST_56005 [Scheffersomyces stipitis CBS
6054]
gi|149385104|gb|ABN64436.2| ATP dependent DNA ligase [Scheffersomyces stipitis CBS 6054]
Length = 719
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 152/560 (27%), Positives = 263/560 (46%), Gaps = 96/560 (17%)
Query: 103 GNFPMVAAEVLQRRQGMISGG-LTIKELNDLLDRLASS---ENRAEKISVLSTLIKKTNA 158
G+ +VA + + M L + ++ + L ++A S +++A+KIS+++ ++ NA
Sbjct: 198 GDLGLVAQKSRSGQPTMFKPAPLDVDQVFENLTKIAKSTGKDSQAKKISLINKMLTACNA 257
Query: 159 Q--EMKWIIMIILKDLKLGISEKSIF---------------HEFHPD----AEDL----F 193
+ E K++I + L++G++EK++ +P+ +ED+ F
Sbjct: 258 KSSEAKFLIRSLEGKLRIGLAEKTVLIGLAQAFVNYEAKDSKRINPEKLTQSEDVVREAF 317
Query: 194 NVTCDLKLVCEK--------LKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGK 245
+ + +++ L D Q + G ++P LA + G+
Sbjct: 318 SQIPNYEILIRNAYEYGIFNLLDHCQ------LTPGIPLKPMLAKPTKSISEVLDRFQGE 371
Query: 246 EVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHSEYGHAMSKIIE-----QNVLVDRCI 298
E E K+DG+R Q+H +G+ + +SR+ D SE + I++ Q I
Sbjct: 372 EFTCEYKYDGERAQVHLLHDGT-VRIYSRNSEDMSERYPDLISIMKDFIKTQEGQAPSMI 430
Query: 299 LDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKE 358
LD E + WD N+ F + D +C FAFD+LY + +I +SLKE
Sbjct: 431 LDCEAVAWDRVANKILPFQVLSTRKRKDVDEKDITVHICLFAFDILYFDNEPLITKSLKE 490
Query: 359 RHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDE 418
R +++++ + P G+ + + + N+DE+++F +++++ E
Sbjct: 491 RRQVMEENLTPMDGKFQFATAKN-----------------SSNLDELQQFLDQSVKDSCE 533
Query: 419 GIVLKDLGSK---WEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFL 474
G+++K L K +EP RS WLKLK +Y+ G LD+++IG Y G G+R G FL
Sbjct: 534 GLMVKMLNGKESYYEPSKRSRNWLKLKKDYLAGVGDSLDLVVIGAYIGRGKRTGNYGGFL 593
Query: 475 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN 534
+A + DT + + C++GTG SDE+L ++ TKLKP + PK P + T
Sbjct: 594 LASYNQ---DT--GEYETTCKIGTGFSDEDLASLHTKLKP--TEISVPK---PYYVYDTT 643
Query: 535 NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY-------SLRFPRIDRVRYDKPW 587
NS +PDVW E +I +T+D+ S ++ A + SLRFPR R+R DK
Sbjct: 644 NSNAKPDVWFEP--TTIFEVLTADLSL--SPIYKAAHQEYGKGISLRFPRFLRIRDDKGI 699
Query: 588 HDC---LDVQSFVELVHSSN 604
D V F E S N
Sbjct: 700 EDATSSTQVSEFYERQASVN 719
>gi|357621098|gb|EHJ73055.1| hypothetical protein KGM_05634 [Danaus plexippus]
Length = 917
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 160/663 (24%), Positives = 276/663 (41%), Gaps = 73/663 (11%)
Query: 3 KTEETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSAL----RLILPSLDR 58
KTE+ + + +L I K +K + F CD + L + +LP + +
Sbjct: 137 KTEDDKFSIFFTLCKEISKVDAYTEKTAIVNNFFTNGCDGKKFNGDLVLWCKFLLPQVSK 196
Query: 59 ERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQG 118
Y LK L D L + G A NF + Q
Sbjct: 197 R--VYNLKSKQLIKLFARIFNTDHDDM----LTHLENGDIADTLQNFFQKSNTYKPATQS 250
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE 178
LT++ ++D L L+ E+I +IK ++K +I +I DL++
Sbjct: 251 ----SLTLQIVDDFLHELSKLTKEEEQIYHFKKIIKNCTLDDLKMLIRLIKGDLRINAGP 306
Query: 179 KSIFHEFHPDAEDLFNVTCDLKLVCEKL---------KDRNQRHKRQDIEVGKAVRPQLA 229
K I HPDA +F + DL +V E++ KD R+ + + + V P LA
Sbjct: 307 KHILEGVHPDAYSVFQTSRDLDMVLERVLPQSSEVKHKDAMHRNVQAKLSIMTPVLPMLA 366
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDH--SEYGHAM 284
A +K + E K+DG+R+Q+HK G+E YFSR+ + H S + +
Sbjct: 367 EACKSVEMAMKKCPNG-MFSEIKYDGERVQVHKKGNEFKYFSRALKPVMAHKVSHFKDYL 425
Query: 285 SKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVL 344
+ + V ILD E+L+ D + FG+ + D +C + FD L
Sbjct: 426 PQAFPKGV---DLILDAEVLMVDLKTGKPLPFGT----LGIHKQSEFKDAGVCLYIFDCL 478
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
Y +I +K+R ++L + +V + +HV + + + +
Sbjct: 479 YYNGEILIDMPIKKRRQILH----------DNMVE---IKNHVMFSEQE----LIYKPSD 521
Query: 405 VEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYY 461
+ + ++ EG+VLKDL S ++PG R WLK+K +Y+ G+ D++++G ++
Sbjct: 522 LANMIAKVLQLGLEGLVLKDLESTYDPGKRH--WLKVKKDYLFDGAMADTADLIVLGAWF 579
Query: 462 GSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 521
G+G++GG ++ FL+ D + ++++ +V TG D L+ + +L P K
Sbjct: 580 GTGKKGGMMSVFLMGCL-----DKFRNKWVTVTKVHTGHDDSTLERLQKELSPLMVKISQ 634
Query: 522 PKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 581
P++ PD P+K + IT T + + S+RFPR+ R+
Sbjct: 635 DSNKVPNWLDCKKGM--IPDFVAADPKKQPVWEITGTELTKANLHTADGISVRFPRVTRI 692
Query: 582 RYDKPWHDCLDVQSFVELVHSSNGTTQKG--KEYGGLQDD------KPKQFRSSRKGEKK 633
R DK W +++ L +S T + DD KPKQ + K +
Sbjct: 693 RDDKNWETATNLEELKHLYKASKEKTDVSLLNKLAATADDYVPPEKKPKQSPKTAKNKTS 752
Query: 634 NVS 636
VS
Sbjct: 753 PVS 755
>gi|340371652|ref|XP_003384359.1| PREDICTED: DNA ligase 3 [Amphimedon queenslandica]
Length = 968
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 156/568 (27%), Positives = 252/568 (44%), Gaps = 79/568 (13%)
Query: 63 YGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISG 122
Y L+ + L A G S D D V + KG A A F + + +
Sbjct: 221 YNLQSKQIVKILSQAYGCSLD--DMVE--DLEKGDVAETAKKFFEEESVI----KPAAKS 272
Query: 123 GLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
LT+ +++ LDR+ E+ ++I+K ++K+II +I DL+ K I
Sbjct: 273 TLTLFDVDSFLDRMEKLTKEDEQKKEFLSIIRKCTGNDIKYIIRLIKHDLRTNAGPKHIM 332
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQR--------HKRQDIEVG--KAVRPQLAMRI 232
P+A F V+ DL+ V +++ +++ K I V V+P LA
Sbjct: 333 DALDPNAYAAFQVSHDLEDVVQRVLSKSEEGAGGKPGLTKELSIRVTLMTPVKPMLAEAC 392
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNV 292
A +K + E K+DG+R+Q+HK G+ YFSRS GH ++ I ++
Sbjct: 393 RSVAMAMKKCPNG-MFAEIKYDGERVQVHKQGTTFQYFSRSL--KPVQGHKVAHI--KDY 447
Query: 293 LVDRC------ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYV 346
L C ILD E+L+ D FG+ K A D C F FD+LY
Sbjct: 448 LPQACPHGDSMILDCEVLMVDIKTGDPLPFGTLGIHKKNA----FKDAVCCLFIFDLLYF 503
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
S++ + +R +LL++ VK V +H + S + +P +E+
Sbjct: 504 NGESLLDTPIIKRRKLLEENVKE--------VKNHIMLSEAKLVKQP---------EELS 546
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLD----VLIIGGYYG 462
I+ EG+VLKD S +EPG R WLK+K +Y+ G+ D ++++G YYG
Sbjct: 547 DLIMTVIKKGLEGLVLKDTKSIYEPGKRH--WLKVKKDYLEGGAMADTADLLIVLGAYYG 604
Query: 463 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSD-------EELDAVVTKLKPY 515
+G +GG ++ FL+ + D RF + C+ G G D +ELD +TK+
Sbjct: 605 TGSKGGLMSVFLMGVY-----DKTNDRFCTVCKCGNGHDDATIMKLQDELD--MTKISKD 657
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 575
+ K PS+ + N PD+ + P+ + + IT + + + S+RF
Sbjct: 658 YSKV-------PSWLHI--NKGLTPDLVVSDPKSAPVWEITGAEFSQSTNHTAGGVSIRF 708
Query: 576 PRIDRVRYDKPWHDCLDVQSFVELVHSS 603
PR+ R+R DK W+ D+Q L S
Sbjct: 709 PRVTRIRDDKDWNTATDLQRLKTLYEKS 736
>gi|391345556|ref|XP_003747051.1| PREDICTED: DNA ligase 3 [Metaseiulus occidentalis]
Length = 900
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 150/566 (26%), Positives = 264/566 (46%), Gaps = 51/566 (9%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAG 103
D + ++ +LP +++ Y L+ L C + A D DA+ + + G A
Sbjct: 197 DTYLWVKFLLPMVNKR--IYNLQSKQL--CKLFARIFGGDILDAM-IEHLEAGDVAETIA 251
Query: 104 NFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKW 163
NF E ++ + S L++++++ L+ L+ ++I +L + K A ++K
Sbjct: 252 NF----HETSKKCPPLKSAALSLQQVDRFLEELSPMTREDDQIEILEKIASKCTANDLKM 307
Query: 164 IIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKA 223
II +I D+++ K I +P A + F + DL+ V K + R+ V
Sbjct: 308 IIRLIKHDIRINAGPKHILEALNPAAYEAFQASLDLQEVVRKSLAEGELSSRRI--VCTP 365
Query: 224 VRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEY 280
VRP LA A+++ K + E K+DG+R+Q+HK G + YFSRS +DH +
Sbjct: 366 VRPMLAEPCRSVDFAFKRCP-KGMFTEVKYDGERVQLHKQGDKFLYFSRSLKPVVDH-KV 423
Query: 281 GHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFA 340
H I + D I+DGE+L+ +T N FG+ + KA + S +C F
Sbjct: 424 KHFKQYIPKAFTQGDSLIIDGEILLVNTKTNEILPFGTLGKHKKAQFEEAS----VCLFV 479
Query: 341 FDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAH 400
FD L S++ L ER E+L+K ++ K H + S + +
Sbjct: 480 FDCLLYNGKSLLDVPLCERREILRKNMREIK--------HHVMLSDME---------IVK 522
Query: 401 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLII 457
+ ++ ++ I EG+VLKD SK+EPG R W+K+K +Y++ G+ D++++
Sbjct: 523 SPSRLKTKIEDAINTGLEGLVLKDPQSKYEPGKRH--WMKVKKDYLQDGAMADSADLVVV 580
Query: 458 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 517
G Y+G+G++GG+++ FL+ +R+++ +V TG D+ L+ + +LK +
Sbjct: 581 GAYFGTGKKGGKMSIFLMGCLNEKT-----KRWVTVTKVHTGHDDQTLENLQRELK--MK 633
Query: 518 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 577
K P + V S+ PD P +S + IT + + S+RFPR
Sbjct: 634 KISKNWELVPDWLDV--KSQLTPDFVAIDPFESQVWEITGAEFSKAEGHTANGISIRFPR 691
Query: 578 IDRVRYDKPWHDCLDVQSFVELVHSS 603
+ R+R DK D + L +S
Sbjct: 692 VTRIRDDKLPKDATTLAELENLFKTS 717
>gi|324502106|gb|ADY40927.1| DNA ligase 3 [Ascaris suum]
Length = 913
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 154/584 (26%), Positives = 267/584 (45%), Gaps = 72/584 (12%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAG 103
D +R++LPS D+ + LKE L + G W +
Sbjct: 275 DMLLLVRMLLPSTDQR--VFNLKEKQLIKLFSNIFG-------------WSPEELTDSFN 319
Query: 104 NFPMVAAEVLQRRQGMISGG----LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQ 159
V+ + Q + I G L+++++++ L+RL ++ L+++ K+
Sbjct: 320 QTGDVSVTIRQYFEKSIEDGRKSHLSLQDVDNWLNRLTEYTKEDDQQRHLNSIAKRATPL 379
Query: 160 EMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLV---CEKLKDRNQRHKRQ 216
E+++I+ +I KDL++ K I A + F + DLK V C+ L
Sbjct: 380 ELQYILRLIKKDLRINAGAKHILDGIKKGAYEAFQNSRDLKSVLEKCQTLGSDTSFLIDS 439
Query: 217 DIEVGKAVRPQLAMRIGDAHAAWRK-LHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFL 275
I +G V+P LA A + ++G + E K+DG+R+Q+HK+G +FSRS
Sbjct: 440 GITLGTPVKPMLAEPCRSVEQAMKTCVNG--MFSEIKYDGERLQLHKSGDTFTFFSRSLR 497
Query: 276 DHSEYGHA-MSKIIEQNVLV-DRCILDGEMLVWDTSLNRFAEFGS-----NQEIAKAARD 328
E+ + +S +I Q ILD E+L+ DT+ + FG+ ++ A A
Sbjct: 498 PVQEHKVSHLSDVIPQAFPKGGDMILDAEVLLVDTATGKPLPFGTLGVHKKEQFANAL-- 555
Query: 329 GLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVR 388
+C F FD L ++ + LKER ++L++ + VP+ L S+
Sbjct: 556 -------VCLFVFDCLLFDGKCLVDRPLKERKKILEENINE--------VPNRVLLSN-- 598
Query: 389 PQGEPCWSLVAHNV-DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIR 447
+ L+ N D+++ + I+ EG+VLKDL S +EPG R WLK+K +Y+
Sbjct: 599 ------YQLIRKNEHDKLKTMIWKAIDEGLEGLVLKDLESVYEPGKRH--WLKVKKDYLE 650
Query: 448 AG---SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
G D++++G YYG+G +GG ++ FL+ + D F++ + G G D
Sbjct: 651 EGKMADTADLIVLGAYYGTGCKGGMMSVFLMGVY-----DEASNVFLTVTKCGNGHDDAT 705
Query: 505 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRS 564
LD + +L+P RK + P + + + + PD I+ P+K+ + IT RS
Sbjct: 706 LDRINKELQPRMRKIGRDYDSLPCWLKCSRSL--VPDFVIDDPKKAPVWEITG-AEFSRS 762
Query: 565 EVFSA-PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTT 607
+ SA S+RFPR+ ++R DK W ++ + S T
Sbjct: 763 DNHSARGISIRFPRVTKIRDDKSWSSATNIDELQRMFEVSKQKT 806
>gi|190346728|gb|EDK38885.2| hypothetical protein PGUG_02983 [Meyerozyma guilliermondii ATCC
6260]
Length = 937
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 150/596 (25%), Positives = 259/596 (43%), Gaps = 80/596 (13%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAP--- 100
D A LI P ++ + Y ++++ LA ++ L +S S D +L W+K
Sbjct: 66 DIMPAAPLIFP--NKAKRLYYIRDTTLARLVVKMLKISPKSQDYDKLFKWKKHYHEYKHH 123
Query: 101 ------NAGNFPMVAAEVLQRRQG---MISGGLTIKELNDLLDRLASSE--NRAEKISVL 149
N + P + A++ R+ ++ + I E+N +L+ L + E A+++++L
Sbjct: 124 HRRDTRNLKSLPFIIAQIYSERRDPDKIVKPTIKISEVNKVLETLTTDEASKSAQQVAIL 183
Query: 150 STLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDR 209
+++K ++++W I+LK LG E + F +HPDA L+ + +L V L D
Sbjct: 184 EPVVEKLTIEQLRWFFTILLKISTLGSFETAFFERWHPDAPRLYGLCNNLSKVFWLLTDP 243
Query: 210 NQRHKRQDIEVGK--AVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEI 267
R + + PQL+ ++ ++ IE K DGDR+ +H S
Sbjct: 244 EVRLTDDQLTIQPFYPFLPQLSQKVNISYEKLCARMNNAFYIEEKMDGDRMILHFQDSRF 303
Query: 268 HYFSRSFLDHS-EYGHAMSKIIEQNVLVD-------RCILDGEMLVWDTSLNRFAEFGS- 318
+FSR D++ YG + L D +LDGEM+ WD FG+
Sbjct: 304 KFFSRRTKDYTLLYGASFQIGSLTKYLTDAFHPRVKSIVLDGEMVAWDFKRKVILPFGTL 363
Query: 319 -NQEIAKAARDGLSSD------RQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSK 371
+ +A R ++D + FDVL+V ++ + L R +LL+ ++
Sbjct: 364 KTSAVQEAVRQFTTTDVFEEQSAWPLFIVFDVLHVNGKNLTNHKLSYRKQLLRSLINEIP 423
Query: 372 GRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEP 431
+ E L G +P D+++ K I +R EG+V+K++ SK+
Sbjct: 424 HKFELLPLMKG--------SDP---------DDIKLAIKNVISDRGEGLVIKNVDSKYHV 466
Query: 432 GDRSGKWLKLKPEYI-RAGSDLDVLIIG------GYYGSGRRGGEVAQFLVALAERPAPD 484
R W+K+KPEY+ + G +LD++IIG Y G R E
Sbjct: 467 AQRDNSWVKVKPEYLEQFGENLDLVIIGLIPAVKNSYMCGLRDKENGNV----------- 515
Query: 485 TYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWI 544
F SFC V G ++ E D + +L K+ K PP + +++PD WI
Sbjct: 516 -----FKSFCTVANGFTEGEFDR-LERLTA--GKWNNLKTNPPP-TDLIQFGRKKPDFWI 566
Query: 545 ESPEKSIILSITS-DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+P S+ L I + I E ++ +L R+R DK DC+ +Q + E+
Sbjct: 567 -NPNDSVALEIKARSIDVSLEETYAVGTTLHNLYCRRIRDDKLIEDCVTLQEYREM 621
>gi|384486830|gb|EIE79010.1| hypothetical protein RO3G_03715 [Rhizopus delemar RA 99-880]
Length = 413
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 217/459 (47%), Gaps = 74/459 (16%)
Query: 49 LRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMV 108
+R+ LP LD YGLKE LA P +G+ V
Sbjct: 1 MRMFLPKLDSRE--YGLKEDALA----------------------------PVSGDLANV 30
Query: 109 AAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMII 168
A E ++ R + G TIKE +++LD LA+S + + +S+L +IK EM+WII II
Sbjct: 31 AYEKIKDRSSVSVGTKTIKETHEILDELANSNSMEKHVSILKRMIKSYTPSEMQWIIRII 90
Query: 169 LKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQL 228
+KDLK+G+SE S+ FH DA+ ++ L +C +L + + + I + ++PQ
Sbjct: 91 VKDLKIGLSENSVLTVFHKDAKAAYDSGKSLYYICHELMHSSAKFNDEHISIFYPLKPQR 150
Query: 229 AMR---------IGDAHAAWRKLHGKE--VVIECKFDGDRIQIHKNGS--EIHYFSRS-- 273
+R I D + + K +E K DGDR+Q+H + + +F+R+
Sbjct: 151 GVRNSNDEFKKFIEDNQKLFLRHSSKAPYFYVEEKIDGDRMQLHYDPGLDKFMWFTRNQN 210
Query: 274 -----FLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARD 328
F +S +S I + + R ILDGEM+ +D N FG+ + + ++
Sbjct: 211 NFTLRFGSNSNDTGKLSSQIYKGLPSKRVILDGEMVAFDPKTNVILPFGT---VRTSTQN 267
Query: 329 GL--SSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSH 386
+ S + C+ FD+L+ D ++ L+ER LL+ ++ ++G L+ + +
Sbjct: 268 DIEDSDEAHPCFIVFDILWFDDKLMMPYPLEERLYLLESIIT-NQGNSLKLLTRKKMTTE 326
Query: 387 VRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI 446
E E ++ R EG++LK + ++ ++ WLK+KP+Y+
Sbjct: 327 EEAMNE----------------LNEAMKMRMEGLMLKMPYASYQIK-QTNAWLKVKPDYM 369
Query: 447 RAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPD 484
+ D D+L++G YG+GRR +AQF A+ + PD
Sbjct: 370 DSLLDNCDLLVVGAKYGTGRRNHSLAQFFCAIRDDSIPD 408
>gi|18029884|gb|AAL56553.1|AF393655_1 DNA ligase III isoform beta [Xenopus laevis]
Length = 906
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 149/549 (27%), Positives = 249/549 (45%), Gaps = 51/549 (9%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI E++DLL RL+ ++ +VL + ++ + ++K II ++ DL++ K +
Sbjct: 337 LTIHEVDDLLTRLSKMTKEEDQQNVLEDIARRCTSNDLKCIIRLVKHDLRMNSGAKRVLD 396
Query: 184 EFHPDAEDLFNVTCDLKLVCEK-LKDRNQ-----RHKRQDIEVGKAVRPQLAMRIGDAHA 237
P+A D F + +L V E+ L++ Q R + V+P LA
Sbjct: 397 ALDPNAYDAFKASRNLGDVVERVLRNEQQAPGMKRTLSVQASLMTPVQPMLAEACKSIEY 456
Query: 238 AWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQNVLV 294
A +K + E K+DG+R+Q+HK+G YFSRS L H + H I +
Sbjct: 457 AMKKCPNG-MYAEIKYDGERVQVHKDGDHFSYFSRSLKPVLPH-KVAHFKDFIPKAFPGG 514
Query: 295 DRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQ 354
+ ILD E+L+ DT+ + FG+ KAA D +C F FD +Y S++ +
Sbjct: 515 NSMILDAEVLLIDTNYGKPLPFGTLGVHKKAA----FKDASVCLFVFDCIYFNGVSLMDR 570
Query: 355 SLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIE 414
L ER + +++ + +P+H + S ++ + A D + + +E +
Sbjct: 571 PLNERRKFMRENM--------VEIPNHIMFSEMKHVIK-----AADLADMITRVIREGL- 616
Query: 415 NRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVA 471
EG+VLKD+ S +EPG R WLK+K +Y+ G+ D+ ++G YYG G GG ++
Sbjct: 617 ---EGLVLKDIKSNYEPGKRH--WLKVKKDYLNEGAMADTADLAVLGAYYGKGANGGIMS 671
Query: 472 QFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQ 531
FL+ D + + + + +G D L + +L + + P + PS+ +
Sbjct: 672 IFLMGCY-----DPEGQHWCTVTKCSSGYDDATLQRLQKELN-MVKISKDPSKI-PSWLK 724
Query: 532 VTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCL 591
+ N PD I+ P+K+ I IT + + S+RFPR R R DK W
Sbjct: 725 INKNY--FPDFIIQDPKKAPIWEITGAEYSKAEAHTAGGLSIRFPRCTRFRDDKDWKTAT 782
Query: 592 DVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQT-----D 646
+Q EL S + QD+ SSR+ E + ++T
Sbjct: 783 TLQQLKELYRLSKEKSDFNITATSSQDEDGSSECSSRENEGNSTQTSSGSLVKTIKNVPS 842
Query: 647 VSDIKGETS 655
S KG+TS
Sbjct: 843 KSPAKGKTS 851
>gi|407465083|ref|YP_006775965.1| ATP-dependent DNA ligase I [Candidatus Nitrosopumilus sp. AR2]
gi|407048271|gb|AFS83023.1| ATP-dependent DNA ligase I [Candidatus Nitrosopumilus sp. AR2]
Length = 588
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 156/542 (28%), Positives = 246/542 (45%), Gaps = 74/542 (13%)
Query: 79 GMSKDSADAVRLIN--WRKGGAAPNAGNFPMVAAEVLQRRQG-MISGGLTIKELNDLL-- 133
+SK S ++ I +RKGG + G+ V E Q+ Q + +T++ + D L
Sbjct: 68 AISKSSGIPIKKIEDEYRKGG---DLGHASTVILE--QKTQTTFLVEDITVERVYDTLFK 122
Query: 134 -DRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHE----FHPD 188
+L + ++ K+ +S+L+ E +I+ I+L L+LGI+E ++ F +
Sbjct: 123 IAKLGGTRSQDMKMKYISSLLNDATPLEASYILKILLGTLRLGIAENTVMDALAIAFSGN 182
Query: 189 AED------LFNVTCDLKLVCEKLKDRNQRHKRQ-DIEVGKAVRPQLAMRIGDAHAAWRK 241
E+ +NV+ DL V E + + + +I + +RP LA R+ A K
Sbjct: 183 KENRKKLQYAYNVSSDLGKVAETIATKGLEGIEEFEIILFNPIRPMLADRVKSEEEAIEK 242
Query: 242 LHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDG 301
+ G E E K DG+R+Q+H G ++ FSRS Y + + I +N+ D IL+
Sbjct: 243 M-GNEFAAEYKLDGERVQLHIEGDKVELFSRSLERIESYYPDIIEKIPKNIQADNIILEA 301
Query: 302 EMLVWDTSLNRFAEFGSNQEIAKAAR----DGLSSDRQLCYFAFDVLYVGDTSVIHQSLK 357
E + + + F F QE+ R + ++ + FD+LY S I S K
Sbjct: 302 EAVAINENTGEFLPF---QELMHRRRKYKIEKAVTEYPITVNFFDILYCNGKSCIDLSYK 358
Query: 358 ERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRD 417
ER E L+K VK + +P + N E+E F + +I
Sbjct: 359 ERREKLEKHVKEDE--FAKYIPMK----------------IVKNQSEIEDFMENSINAGS 400
Query: 418 EGIVLKDLGSKWEPGDRSGKWLKLKPEY-IRAGSDLDVLIIGGYYGSGRRGGEVAQFLVA 476
EG++LK L ++ G R WLKLK EY G LD+++IGG++G GRR G L+A
Sbjct: 401 EGLMLKMLDKPYQAGSRGSHWLKLKREYRNELGDSLDLVVIGGFFGKGRRTGNYGTLLLA 460
Query: 477 LAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNS 536
+ DT+P S C+VGTG SDE LD + L P + P+ S
Sbjct: 461 TYDED-EDTFP----SICKVGTGFSDESLDQLYQILHPKVSIKKNPRII----------S 505
Query: 537 KERPDVWIESPEKSIILSITSDIRT--IRSEVFS-----APYSLRFPRID-RVRYDKPWH 588
DVW E PE +I + S+I I F+ A +LRFP+ ++R +K
Sbjct: 506 DMEADVWFE-PE-LVIEVVASEITLSPIHKAAFNEIRKDAGLALRFPKFTGKIRVEKAAE 563
Query: 589 DC 590
D
Sbjct: 564 DA 565
>gi|14423679|sp|Q9P9K9.1|DNLI_SULSH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|7341364|gb|AAF61267.1|AF242877_1 DNA ligase [Sulfolobus shibatae]
Length = 601
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 139/504 (27%), Positives = 240/504 (47%), Gaps = 63/504 (12%)
Query: 124 LTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ E+ L ++A + +R KI +L+ L+KK + E K+++ + L++GI + +
Sbjct: 119 LTVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDAT 178
Query: 181 IFHEF----------HPDAEDLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQLA 229
+ E +N+ DL + + + ++ + K EVG +RP LA
Sbjct: 179 VLDAMAIAFGGGQSASEIVERAYNLRADLGNIAKIIVEKGIEALKTLKPEVGIPIRPMLA 238
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE 289
R+ + +K+ G +V + K+DG+R QIHK +I FSR + + + + I
Sbjct: 239 ERLSNPEEILKKVGGSALV-DYKYDGERAQIHKKSDKIFIFSRRLENITSQYPDVVEYIS 297
Query: 290 QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG----LSSDRQLCYFAFDVLY 345
+ V I++GE++ D F QE+ R + + F FD++Y
Sbjct: 298 KYVEGKEFIIEGEIVAVDPESGEMRAF---QELMHRKRKSDIYEAIKEYPVNVFLFDLMY 354
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
D + L+ R +LL+ +VKP N +V+ + +NV+++
Sbjct: 355 YEDVDYTTKPLEVRRKLLESIVKP--------------NDYVKI----AHHIQVNNVEDL 396
Query: 406 EKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYG 462
+ FF I EG+++K +G + ++ G R W+KLK +Y +D +D++++GG+YG
Sbjct: 397 KSFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYG 456
Query: 463 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
G+RGG+++ L+A A P DT F S C+V +G SDE+LD + KL R ++P
Sbjct: 457 KGKRGGKISSLLMA-AYNPKTDT----FESVCKVASGFSDEQLDELQKKLMEIKRDIKHP 511
Query: 523 KRAPPSFYQVTNNSKERPDVWIESPEKSIILS---ITSDIRTIRSEVFS--APYSLRFPR 577
+ NSK PD+WIE + I+ S + T +V A S+RFPR
Sbjct: 512 RV----------NSKMEPDIWIEPVYVAEIIGAEITISPLHTCCQDVVEKDAGLSIRFPR 561
Query: 578 IDRVRYDKPWHDCLDVQSFVELVH 601
R R DK D +E+ +
Sbjct: 562 FIRWRDDKSPEDATTTDEILEMYN 585
>gi|432901473|ref|XP_004076853.1| PREDICTED: DNA ligase 3-like [Oryzias latipes]
Length = 1011
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 149/500 (29%), Positives = 235/500 (47%), Gaps = 59/500 (11%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RLA E+ S L + KK + ++K II +I DLK+ K +
Sbjct: 374 LTIQEVDESLTRLAQLTKEDEQQSELEAIAKKCTSNDLKCIIRLIKHDLKMNAGAKHVLD 433
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ----------DIEVGKAVRPQLAMRIG 233
P+A D F + +L V +++ RNQ+ + + V+P LA
Sbjct: 434 AVDPNAYDAFKASRNLGDVIQRVL-RNQQEASNGSGPRKLLTVEASLMTPVQPMLAEACK 492
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HK+G YFSRS L H + H I +
Sbjct: 493 SIDQAMKKCPNG-MYAEIKYDGERVQVHKSGDSFSYFSRSLKPVLPH-KVAHFKDYIPQA 550
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ DT ++ FG+ KAA D +C F FD +Y S
Sbjct: 551 FPGGHSMILDAEVLLIDTKSSKPLPFGTLGIHKKAA----FQDANVCLFVFDCIYFNGVS 606
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNS---HVRPQGEPCWSLVAHNVDEVEK 407
++ + LKER + L + +E VP+ L S HV G+ D + +
Sbjct: 607 LMERPLKERRKFL------TDNMVE--VPNRILFSEMKHVTRAGD--------LADMITR 650
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSG 464
+E + EG+VLKD+ S +EPG R WLK+K +Y+ G+ D++++G +YG G
Sbjct: 651 VIREGL----EGLVLKDIKSTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGKG 704
Query: 465 RRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 524
GG ++ FL+ + PD+ ++ C +G D+ + A + K + + P +
Sbjct: 705 SNGGIMSSFLMGCYD---PDSKKWCTVTKC---SGGYDDAMLARLQKELDVIKISKEPSK 758
Query: 525 APPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRY 583
P V N PD I PEK+ + IT +SE+ +A S+RFPR+ R+R
Sbjct: 759 IPGWLKIVKNY---YPDFIIRDPEKAPVWEITG-AEFSKSEMHTADGISIRFPRMTRIRD 814
Query: 584 DKPWHDCLDVQSFVELVHSS 603
DK W ++ EL S
Sbjct: 815 DKDWKTATNLHQLRELFRIS 834
>gi|326435431|gb|EGD81001.1| ligase III [Salpingoeca sp. ATCC 50818]
Length = 1246
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 149/605 (24%), Positives = 272/605 (44%), Gaps = 72/605 (11%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAG 103
D + +RL+LP + Y +K+ + LG DA + A + G
Sbjct: 373 DLYLVIRLLLPR--NPKRVYNMKDKAFVRVFSNLLG-----CDAAAMT------ADLDKG 419
Query: 104 NFPMVAAEVLQRRQGMI---SGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQE 160
+ P A + + + LT+ E+ + L R+ + + L+ K +
Sbjct: 420 DCPETCATFFAKNKRIPPKEKSTLTLAEVENFLRRMEGLTTIDAQTAEFRKLLPKCTVND 479
Query: 161 MKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHK-RQDIE 219
+++I+ + DL+ K I HP A + + + LK + +++ + K +D+
Sbjct: 480 VRFILRSMKHDLRTFAGPKHILSALHPRAYEAWQASHSLKALINRIQATKKGGKLSKDLS 539
Query: 220 VG----KAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFL 275
V AV+P LA A+ K + E K+DG+R+Q+HK G +FSRS
Sbjct: 540 VRASLMTAVKPMLAEACRTYERAFSKCPNG-IYAEIKYDGERVQVHKRGDRFEFFSRSLK 598
Query: 276 DHSEYGHAMSK--IIEQNVLVDRCILDGEMLVWDTSLNRFAEFGS----NQEIAKAARDG 329
S++ K + + D ILD E+L+ DTS + FG+ ++ K AR
Sbjct: 599 PVSDHKITFFKDSVKQACPHGDTMILDAEVLMVDTSTGKPLPFGTLGIHKKKAFKTARP- 657
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
C F FD+L+ S+++++L+ER E L+ V + + + H++
Sbjct: 658 -------CLFIFDILHFNGQSLMNKTLRERREFLESNVVEVEHEIM-----YSEKYHIKS 705
Query: 390 QGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAG 449
Q +E+ K + EG+VLKD S ++PG R +WLK+K +Y++AG
Sbjct: 706 Q------------EELAGLMKRVMSEGLEGLVLKDRHSTYQPGKR--RWLKVKKDYLQAG 751
Query: 450 S---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 506
+ D++++G YYG+G +GG ++ FL+ + ++ + C+VG G +D L+
Sbjct: 752 ALADTADLVVLGAYYGTGTKGGIMSVFLMGCQDSKG------KWRTVCKVGNGHTDAALE 805
Query: 507 AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEV 566
+ +L + + P + P + V N S PD + P+K+ + IT + +
Sbjct: 806 KINRELD-VIKISKDPSKVPS--WLVINKSDLVPDFIVPDPKKAPVWEITGAEFSESTSH 862
Query: 567 FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRS 626
+ S+RFPR+ +VR DK W ++ +L +S T ++ DK +
Sbjct: 863 SADNISIRFPRVTKVRDDKDWQTATSLKELKKLYDTSKERTDIAPAPSFMKKDK-----T 917
Query: 627 SRKGE 631
+R+G+
Sbjct: 918 ARRGD 922
>gi|270014276|gb|EFA10724.1| ligase4-like protein [Tribolium castaneum]
Length = 631
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 202/414 (48%), Gaps = 57/414 (13%)
Query: 245 KEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVL-------VDR 296
K +IE KFDG+R Q+H + YFSR+ D+++ YG + + I L R
Sbjct: 19 KTFIIENKFDGERFQLHMADGQFRYFSRNGFDYTDTYGASFTAGIFTPKLRPVLGPETKR 78
Query: 297 CILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSL 356
ILDGEM++W+ F G N ++ K G Q C+ FD+L D + +Q L
Sbjct: 79 VILDGEMMLWNRETRSFGSKGMNLDVKKLGEGG---KYQPCFCVFDILLHNDRVLTNQPL 135
Query: 357 KERHELLQKVVK-PSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN 415
+R + L+ VVK P +G T+V V E A ++ ++ +++N
Sbjct: 136 FKRLKCLKSVVKNPVEG---TIV--------VSQYSE------ASSLGDIVDALNSSVDN 178
Query: 416 RDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIR-AGSDLDVLIIGGYYGSGRRGGEVAQFL 474
+EGIV+KD S ++ DR+ W K+K EY DLDV+++GG Y SG+ + F
Sbjct: 179 NEEGIVVKDTKSVYKCSDRNSGWFKVKMEYFDDVVHDLDVILMGGCYSSGK----LNSFF 234
Query: 475 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY---FRKYEYPKRAPPSFYQ 531
V ++ +TY +SF R+ +GLSDE+LD + K + F+ + F
Sbjct: 235 VGVSS--GANTY----LSFGRISSGLSDEQLDLLAEKFQSKGVDFKSFSTESEGKLQF-- 286
Query: 532 VTNNSKERPDVWIESPEKSIILSI--TSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHD 589
++RPD++IE P S IL I T IRT V PY+LRFPR+ ++R DKP +
Sbjct: 287 ----GRDRPDLYIE-PHNSCILQIRATELIRTTNDTV-KCPYTLRFPRVLKIRDDKPVDE 340
Query: 590 CLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFL 643
C + +EL + + K + L + K +R +K + ++ S L
Sbjct: 341 CFSINELLELAGQNKPVIKLNKRHIELSEISAK----ARPAKKIKLEVIKSDLL 390
>gi|241951070|ref|XP_002418257.1| dna ligase, putative; polydeoxyribonucleotide synthase [atp],
putative [Candida dubliniensis CD36]
gi|223641596|emb|CAX43557.1| dna ligase, putative [Candida dubliniensis CD36]
Length = 928
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 168/692 (24%), Positives = 300/692 (43%), Gaps = 95/692 (13%)
Query: 27 KKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
KK + FL+T+ + D + + +LI P ++ Y +KE LA LI + K+S
Sbjct: 48 KKAFIIKTFLNTFRTHIGNDVYPSAKLIFP--EKSGRIYFIKEVALARLLIKVYKIPKES 105
Query: 85 ADAVRLINWRKGGA--------APNAGNFPMVAAEVLQRRQGMISG--GLTIKELNDLLD 134
D + L +W K + P+ A+ ++ +R+ ++ TI ++N LD
Sbjct: 106 EDYITLHDWNKSYQRSRRFSIDEKKIRDLPLQASRIISKRRPIVDNVEEYTIPQINSSLD 165
Query: 135 RLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFN 194
+LA ++ +I +L L E++W+I IIL L E+ F+ +HPD +F+
Sbjct: 166 QLALEKSSQGQIDILKPLFDNLGIPEVRWLIHIILNKSILTNMERFFFNTWHPDGYRVFS 225
Query: 195 VTCDLKLVCEKLKDRNQRHKRQDIEVGKA--VRPQLAMRIGDAHAAW-RKLHGK------ 245
+ DL+ + + + R + + + +PQL+ R+ ++ +KL K
Sbjct: 226 ICNDLQKAFQFSTNPDLRLEPSQLAIHPCFKFKPQLSERLTTSYKTLVKKLQRKHEMDVP 285
Query: 246 ------------EVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKI 287
+ IE K DGDR+ +HK+G +FSR D+S YG A++K
Sbjct: 286 YEKKFQELGLENKFYIEEKMDGDRMLLHKDGDSFKFFSRRLKDYSYLYGESFQFGALTKF 345
Query: 288 IEQNVL--VDRCILDGEMLVWDTSLNRFAEFGS--NQEIAKAARDGLSSD---RQLCY-- 338
+ V ILDGEM+ +D N FG+ + I ++ R + D +Q Y
Sbjct: 346 LAHAFAGNVQSVILDGEMVAYDYERNVILPFGTLKSSAIQESVRQFTTIDQYEQQTAYPF 405
Query: 339 -FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSL 397
FDVL++ + + L R +L ++++P R E L D L S
Sbjct: 406 FLVFDVLFLNGKDLTNYPLFFRKNILSRILRPIPNRFEVL--DTRLGS------------ 451
Query: 398 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWE-PGDRSGKWLKLKPEYI-RAGSDLDVL 455
+ +++E+ +E + +R EG+VLK++ SK+E G R+ W+K+KPEY+ + G +LD++
Sbjct: 452 ---SPEDIERAIREVVSSRCEGLVLKNVQSKYEIDGFRNPDWIKVKPEYLEKFGENLDLV 508
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
+I G+ ++ L Y SFC G+ EE D +
Sbjct: 509 VI------GKSPAIKNSYMCGLKSVTDGVYY-----SFCTCANGIEIEEFDKIERLTHGK 557
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS-DIRTIRSEVFSAPYSLR 574
+ K + PP + + P WI P S++L I + I T ++ +L
Sbjct: 558 WIKTD--TTMPPE--SLIKFGTKIPTFWIH-PSDSLVLEIRARSIDTRAGTSYAVGSTLH 612
Query: 575 FPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKN 634
++R DK +C+ +Q + + +N K L + + + + K
Sbjct: 613 NNHCRKIREDKTIDECVTLQEYTHI--KANYINDLNKAQTALGKKRESMYSLDNESKLKK 670
Query: 635 VSIVPSHF------LQTDVSDIKGETSIFSDM 660
V + F + +D + GE + +M
Sbjct: 671 VKVESDLFDGMEFLIMSDKREADGEVTTIEEM 702
>gi|312094324|ref|XP_003147982.1| DNA ligase III [Loa loa]
Length = 572
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 136/495 (27%), Positives = 233/495 (47%), Gaps = 64/495 (12%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
+T + +++ L++L+ ++ S S + + + E+K+II +I+KDL++ K I
Sbjct: 39 MTNQMVDEWLEKLSELTREKDQQSHFSKIRELVSCLELKYIIRLIMKDLRINAGAKHILE 98
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVG----KAVRPQLAMRIGDAHAAW 239
A ++F + +L+ V EK + Q K + +E G V+P LA D A
Sbjct: 99 GLRKGAYEMFQHSRNLQTVIEKCQ---QTDKEELLESGIILNTPVKPMLAEPCRDVKQAM 155
Query: 240 RKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDR 296
K KE+ E K+DG+R+Q+HK+GS +FSRS LDH ++K++ + R
Sbjct: 156 EKC-SKEMYAEIKYDGERLQLHKDGSNFRFFSRSLKPALDHKVVD--LNKVVSEAFPTSR 212
Query: 297 -CILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQS 355
I+D EML+ DT+ + FG+ ++ +S + QS
Sbjct: 213 DLIVDTEMLLIDTNTGKPLPFGTLG-----------------------IHKKSSSRMRQS 249
Query: 356 LKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN 415
L+ER + L+ +K VP+ L S+ C + D++E + I+
Sbjct: 250 LRERRKFLEDNMKE--------VPNRVLLSN-------CNLIKKGETDKLEMLIWKAIDE 294
Query: 416 RDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQ 472
EG+VLKDL S +EPG R WLK+K +Y++ G D++++G +YG+G +GG ++
Sbjct: 295 GLEGLVLKDLDSVYEPGKRH--WLKVKKDYLKGGDMADSADLVLLGAFYGTGNKGGTMSV 352
Query: 473 FLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV 532
FL+ + D R+F + + G G D LD + +L+P K P +
Sbjct: 353 FLMGVY-----DKEKRKFCTVTKCGNGHDDATLDRINKELEPKMHKISRVYENLPEWIDC 407
Query: 533 TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLD 592
+ + PD + P++S + I T ++ S+RFPR+ ++R DK W
Sbjct: 408 SRSL--VPDFIVIDPKESPVWEIAGAEFTRSDNHTASGISIRFPRVIKIRDDKNWETATS 465
Query: 593 VQSFVELVHSSNGTT 607
+Q L S T
Sbjct: 466 LQELERLFELSKPKT 480
>gi|260951201|ref|XP_002619897.1| hypothetical protein CLUG_01056 [Clavispora lusitaniae ATCC 42720]
gi|238847469|gb|EEQ36933.1| hypothetical protein CLUG_01056 [Clavispora lusitaniae ATCC 42720]
Length = 961
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 157/636 (24%), Positives = 280/636 (44%), Gaps = 99/636 (15%)
Query: 25 AAKKRSKFRKFLDTYCD--SVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSK 82
+AKK + +F+ + V+ AL LI P+ D + Y +K+ L +I L + +
Sbjct: 50 SAKKVNIIEEFIKLWRTHFGVNISPALSLIFPNKDSRK--YFIKDVALTRLVIKLLRLQQ 107
Query: 83 DSADAVRLINWRKG----------GAAPNAGNFPMVAAEVLQRRQ---GMISGGLTIKEL 129
S D + NW+K + G+ P++ A ++ RR+ ++ +T+ E+
Sbjct: 108 GSTDYSIIKNWKKSYQQKIQLTGSNEHRSTGDLPLIIARIMSRRRDPNSVVETSVTVTEV 167
Query: 130 NDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDA 189
ND+LD+L+ + + ++++ VL + + E+++ IILK+ L E+S F +HPDA
Sbjct: 168 NDVLDKLSQNTSASDQLEVLDPFLDRLTITEVRFFFQIILKESMLSFFERSFFIAWHPDA 227
Query: 190 EDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGK--AVRPQLA-----------------M 230
+L+ V D+K V L D +R Q + V + PQ + M
Sbjct: 228 FNLYKVCNDIKKVFWLLTDPEKRLTPQQLCVQPMYSFIPQSSKSLTLSYENLCKKMKSGM 287
Query: 231 RIGDAHAAWRKLHGKE-----VVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGHA- 283
+ D L+ E +IE K DGDR+ +H + +R D++ YG
Sbjct: 288 SLSDKDPKLVNLYKDEGIQDHFLIEEKIDGDRMLMHMVEGNFKWHTRRRRDYTFIYGENY 347
Query: 284 --------MSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGL----- 330
++ +NV +LDGEM+ W FG+ + + A ++ L
Sbjct: 348 HLGSLTKHLTGAFHKNV--KSIVLDGEMVAWSKDRQLVLPFGTLR--SAAVQEALRQFDV 403
Query: 331 -----SSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNS 385
++ + FD+L++ + + L R +LL KVV R E L
Sbjct: 404 VDVYEGNNSWPLFIIFDILHLNGQDLSNLPLFYRKDLLSKVVTNVPHRFEILE------- 456
Query: 386 HVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEY 445
W + A D++++ + + R+EGI++K SK+ R W+K+KPEY
Sbjct: 457 ---------W-VKASTPDDIKRNMQRIVSERNEGIMVKSFLSKYRVHSRDSTWIKVKPEY 506
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G +LD++++ G+ G ++ L + F SFC V G S
Sbjct: 507 LENFGENLDLVVV------GKIGRIKTSYICGLRDEEEEGC----FKSFCMVANGFSKAV 556
Query: 505 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRS 564
+ +KL ++ Y+ +R PP + +PD WI +P SI+L I + + +
Sbjct: 557 YRQIESKLYNFWVNYK--ERKPPE--DLVKFGTRKPDFWI-NPANSIVLEIKARSIEVTA 611
Query: 565 EV-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
E ++A +L VR DK + +C+ +Q + EL
Sbjct: 612 ETPYAAGSTLHNLWCRAVREDKGYEECITLQQYQEL 647
>gi|344285688|ref|XP_003414592.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 3-like [Loxodonta
africana]
Length = 1014
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 142/497 (28%), Positives = 238/497 (47%), Gaps = 53/497 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 372 LTIQEVDEFLLRLSRLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 431
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRH------KRQDIEVGKA----VRPQLAMRIG 233
P+A + F + +L+ V E++ RN++ +R+ + V + V+P LA
Sbjct: 432 ALDPNAYEAFKASRNLQDVVERVL-RNEQEVEKEPGQRRALSVQASLMTPVQPMLAEACK 490
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 491 SIEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQA 548
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ DTS + FG+ KAA + +C F FD +Y D S
Sbjct: 549 FPGGHSMILDSEVLLIDTSTGKPLPFGTLGVHKKAA----FQEANVCLFVFDCIYFNDVS 604
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L ER + L + +P+ + S ++ + + VD + + +
Sbjct: 605 LMDRPLCERRKFLHDNM--------VEIPNRIMFSEMKQVKK-----ASDLVDMINRVIR 651
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRG 467
E + EG+VLKD+ S +EPG R WLK+K +Y+ G+ D+L++G +YG G +G
Sbjct: 652 EGL----EGLVLKDVKSTYEPGKR--HWLKVKKDYLNEGAMADTADLLVLGAFYGQGSKG 705
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G ++ FL+ D +++ + + G D L + T+L + + P + P
Sbjct: 706 GMMSIFLMGCY-----DPGSQKWCTVTKCSGGHDDATLARLQTELD-MVKISKDPSKI-P 758
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKP 586
S+ ++ N PD + P+K+ + IT +SEV +A S+RFPR R+R DK
Sbjct: 759 SWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEVHTADGISIRFPRCTRIRDDKD 815
Query: 587 WHDCLDVQSFVELVHSS 603
W ++ EL S
Sbjct: 816 WKSATNLPQLKELYQLS 832
>gi|15897140|ref|NP_341745.1| ATP-dependent DNA ligase [Sulfolobus solfataricus P2]
gi|284174384|ref|ZP_06388353.1| ATP-dependent DNA ligase [Sulfolobus solfataricus 98/2]
gi|384433651|ref|YP_005643009.1| ATP-dependent DNA ligase I [Sulfolobus solfataricus 98/2]
gi|20137903|sp|Q980T8.1|DNLI_SULSO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|13813323|gb|AAK40535.1| DNA ligase (polydeoxyribonucleotide synthase (ATP)) (lig)
[Sulfolobus solfataricus P2]
gi|261601805|gb|ACX91408.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus solfataricus 98/2]
Length = 601
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 139/507 (27%), Positives = 241/507 (47%), Gaps = 69/507 (13%)
Query: 124 LTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ E+ L ++A + +R KI +L+ L+KK + E K+++ + L++GI + +
Sbjct: 119 LTVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDAT 178
Query: 181 IFHEF----------HPDAEDLFNVTCDL----KLVCEKLKDRNQRHKRQDIEVGKAVRP 226
+ E +N+ DL K++ EK + + K Q VG +RP
Sbjct: 179 VLDAMAIAFGGGQSASEIIERAYNLRADLGNIAKIIVEKGIEALKTLKPQ---VGIPIRP 235
Query: 227 QLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSK 286
LA R+ + +K+ G +V + K+DG+R QIHK +I FSR + + +
Sbjct: 236 MLAERLSNPEEILKKMGGNAIV-DYKYDGERAQIHKKEDKIFIFSRRLENITSQYPDVVD 294
Query: 287 IIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG----LSSDRQLCYFAFD 342
+ + + I++GE++ D F QE+ R + + F FD
Sbjct: 295 YVSKYIEGKEFIIEGEIVAIDPESGEMRPF---QELMHRKRKSDIYEAIKEYPVNVFLFD 351
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
++Y D + L+ R +LL+ +VKP N +V+ + A+NV
Sbjct: 352 LMYYEDVDYTTKPLEARRKLLESIVKP--------------NDYVKI----AHHIQANNV 393
Query: 403 DEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGG 459
++++ FF I EG+++K +G + ++ G R W+KLK +Y +D +D++++GG
Sbjct: 394 EDLKSFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGG 453
Query: 460 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
+YG G+RGG+++ L+A A P D+ F S C+V +G SDE+LD + KL R
Sbjct: 454 FYGKGKRGGKISSLLMA-AYNPKTDS----FESVCKVASGFSDEQLDELQKKLMEIKRDV 508
Query: 520 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS---ITSDIRTIRSEVFS--APYSLR 574
++P+ NSK PD+W+E + I+ S + T +V A S+R
Sbjct: 509 KHPRV----------NSKMEPDIWVEPVYVAEIIGSEITISPLHTCCQDVVEKDAGLSIR 558
Query: 575 FPRIDRVRYDKPWHDCLDVQSFVELVH 601
FPR R R DK D +E+ +
Sbjct: 559 FPRFIRWRDDKSPEDATTTDEILEMYN 585
>gi|20089613|ref|NP_615688.1| DNA ligase (ATP) [Methanosarcina acetivorans C2A]
gi|74533835|sp|Q8TSR7.1|DNLI1_METAC RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 1
gi|19914533|gb|AAM04168.1| DNA ligase (ATP) [Methanosarcina acetivorans C2A]
Length = 580
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 149/577 (25%), Positives = 265/577 (45%), Gaps = 91/577 (15%)
Query: 59 ERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQG 118
E + G+K+ ++ + A G+S++ AG+ VA E+ ++R+
Sbjct: 55 ENTTLGIKDRLVTRAIAGAYGVSEEEVKK----------RYARAGDLGDVAFELSKKREA 104
Query: 119 MISGGLTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNAQEMKWIIMIILKDLKLG 175
LTI+E+ L ++ + + +K +LS +++K +E K+II I+L L+LG
Sbjct: 105 ----SLTIEEVFKRLRQIKEASGKGSQEKKTGLLSDILQKATPEEGKYIIRIVLGRLRLG 160
Query: 176 ISEKSIFHEFH----------PDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ-DIEVGKAV 224
++ + F ++ ++V D+ + + L + I+ G+ V
Sbjct: 161 FGDQFLLEAFSIAFTGDKKHAGKIKESYSVCTDIGELAQTLAEHGAGAPGYFSIKPGRPV 220
Query: 225 RPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAM 284
+ LA R+ ++ GK+ E K+DG+R+QIHK G EI FSR D + +
Sbjct: 221 KSMLAQRVESFEELEERIKGKKAA-EEKYDGERVQIHKAGDEIKAFSRRLEDITAQYPDI 279
Query: 285 SKIIEQNVLVDRCILDGEMLVW---DTSLNRFAEFGSNQEIAKAARD-GLSSDRQLC--- 337
+ + +++ D +LDGE++ + + R EF Q + + R + R+ C
Sbjct: 280 IEAVRESISADTIVLDGEIVAYAELEKENTRIEEFYPFQNLMQRRRKYEVEKYREKCPVA 339
Query: 338 YFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSL 397
F FD+LY+ S++ ++ ER LL++ V S G+ R
Sbjct: 340 VFFFDILYLNGESLLKKTYPERRALLEEHVNGS-----------GIVHLTR-------RT 381
Query: 398 VAHNVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIRAGSD-LDV 454
V N++E+E FF ET+E EGIV K + S +E G RS WLK K EY + D+
Sbjct: 382 VTENIEELEDFFNETVEKGLEGIVAKSMSSNSVYEAGKRSWLWLKWKQEYSEGMRETFDL 441
Query: 455 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 514
+++G YYG G+R G L A+ + ++F +F +VGTG ++ + + + + L
Sbjct: 442 VVVGSYYGKGKRKGSFGALLCAVL-----NEEEQQFETFTKVGTGFTEADAEEINSLLSA 496
Query: 515 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---- 570
+ E PK V PD++IE ++++ + + SE+ ++P
Sbjct: 497 HTVS-EAPK-------NVIIKKGMLPDIFIEP---AVVIEV------LGSEITNSPGHTA 539
Query: 571 --------YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+LRFPR R+RYD+ D V+ +L
Sbjct: 540 GEGEEETGLALRFPRFLRIRYDRAPFDATTVREIRDL 576
>gi|119389897|pdb|2HIV|A Chain A, Atp-Dependent Dna Ligase From S. Solfataricus
gi|119389898|pdb|2HIX|A Chain A, Atp Dependent Dna Ligase From S. Solfataricus Bound To Atp
Length = 621
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 139/507 (27%), Positives = 241/507 (47%), Gaps = 69/507 (13%)
Query: 124 LTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ E+ L ++A + +R KI +L+ L+KK + E K+++ + L++GI + +
Sbjct: 139 LTVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDAT 198
Query: 181 IFHEF----------HPDAEDLFNVTCDL----KLVCEKLKDRNQRHKRQDIEVGKAVRP 226
+ E +N+ DL K++ EK + + K Q VG +RP
Sbjct: 199 VLDAMAIAFGGGQSASEIIERAYNLRADLGNIAKIIVEKGIEALKTLKPQ---VGIPIRP 255
Query: 227 QLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSK 286
LA R+ + +K+ G +V + K+DG+R QIHK +I FSR + + +
Sbjct: 256 MLAERLSNPEEILKKMGGNAIV-DYKYDGERAQIHKKEDKIFIFSRRLENITSQYPDVVD 314
Query: 287 IIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG----LSSDRQLCYFAFD 342
+ + + I++GE++ D F QE+ R + + F FD
Sbjct: 315 YVSKYIEGKEFIIEGEIVAIDPESGEMRPF---QELMHRKRKSDIYEAIKEYPVNVFLFD 371
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
++Y D + L+ R +LL+ +VKP N +V+ + A+NV
Sbjct: 372 LMYYEDVDYTTKPLEARRKLLESIVKP--------------NDYVKI----AHHIQANNV 413
Query: 403 DEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGG 459
++++ FF I EG+++K +G + ++ G R W+KLK +Y +D +D++++GG
Sbjct: 414 EDLKSFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGG 473
Query: 460 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
+YG G+RGG+++ L+A A P D+ F S C+V +G SDE+LD + KL R
Sbjct: 474 FYGKGKRGGKISSLLMA-AYNPKTDS----FESVCKVASGFSDEQLDELQKKLMEIKRDV 528
Query: 520 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS---ITSDIRTIRSEVFS--APYSLR 574
++P+ NSK PD+W+E + I+ S + T +V A S+R
Sbjct: 529 KHPRV----------NSKMEPDIWVEPVYVAEIIGSEITISPLHTCCQDVVEKDAGLSIR 578
Query: 575 FPRIDRVRYDKPWHDCLDVQSFVELVH 601
FPR R R DK D +E+ +
Sbjct: 579 FPRFIRWRDDKSPEDATTTDEILEMYN 605
>gi|393906039|gb|EJD74156.1| DNA ligase [Loa loa]
Length = 840
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 136/495 (27%), Positives = 233/495 (47%), Gaps = 64/495 (12%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
+T + +++ L++L+ ++ S S + + + E+K+II +I+KDL++ K I
Sbjct: 307 MTNQMVDEWLEKLSELTREKDQQSHFSKIRELVSCLELKYIIRLIMKDLRINAGAKHILE 366
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVG----KAVRPQLAMRIGDAHAAW 239
A ++F + +L+ V EK + Q K + +E G V+P LA D A
Sbjct: 367 GLRKGAYEMFQHSRNLQTVIEKCQ---QTDKEELLESGIILNTPVKPMLAEPCRDVKQAM 423
Query: 240 RKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDR 296
K KE+ E K+DG+R+Q+HK+GS +FSRS LDH ++K++ + R
Sbjct: 424 EKC-SKEMYAEIKYDGERLQLHKDGSNFRFFSRSLKPALDHKVVD--LNKVVSEAFPTSR 480
Query: 297 -CILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQS 355
I+D EML+ DT+ + FG+ ++ +S + QS
Sbjct: 481 DLIVDTEMLLIDTNTGKPLPFGTLG-----------------------IHKKSSSRMRQS 517
Query: 356 LKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN 415
L+ER + L+ +K VP+ L S+ C + D++E + I+
Sbjct: 518 LRERRKFLEDNMKE--------VPNRVLLSN-------CNLIKKGETDKLEMLIWKAIDE 562
Query: 416 RDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQ 472
EG+VLKDL S +EPG R WLK+K +Y++ G D++++G +YG+G +GG ++
Sbjct: 563 GLEGLVLKDLDSVYEPGKRH--WLKVKKDYLKGGDMADSADLVLLGAFYGTGNKGGTMSV 620
Query: 473 FLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV 532
FL+ + D R+F + + G G D LD + +L+P K P +
Sbjct: 621 FLMGVY-----DKEKRKFCTVTKCGNGHDDATLDRINKELEPKMHKISRVYENLPEWIDC 675
Query: 533 TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLD 592
+ + PD + P++S + I T ++ S+RFPR+ ++R DK W
Sbjct: 676 SRSL--VPDFIVIDPKESPVWEIAGAEFTRSDNHTASGISIRFPRVIKIRDDKNWETATS 733
Query: 593 VQSFVELVHSSNGTT 607
+Q L S T
Sbjct: 734 LQELERLFELSKPKT 748
>gi|146418577|ref|XP_001485254.1| hypothetical protein PGUG_02983 [Meyerozyma guilliermondii ATCC
6260]
Length = 937
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 150/596 (25%), Positives = 259/596 (43%), Gaps = 80/596 (13%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAP--- 100
D A LI P ++ + Y ++++ LA ++ L +S S D +L W+K
Sbjct: 66 DIMPAAPLIFP--NKAKRLYYIRDTTLARLVVKMLKISPKSQDYDKLFKWKKHYHEYKHH 123
Query: 101 ------NAGNFPMVAAEVLQRRQG---MISGGLTIKELNDLLDRLASSE--NRAEKISVL 149
N + P + A++ R+ ++ + I E+N +L+ L + E A+++++L
Sbjct: 124 HRRDTRNLKSLPFIIAQIYSERRDPDKIVKPTIKISEVNKVLETLTTDEASKSAQQVAIL 183
Query: 150 STLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDR 209
+++K ++++W I+LK LG E + F +HPDA L+ + +L V L D
Sbjct: 184 EPVVEKLTIEQLRWFFTILLKISTLGSFETAFFERWHPDAPRLYGLCNNLSKVFWLLTDP 243
Query: 210 NQR--HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEI 267
R + I+ PQL+ ++ ++ IE K DGDR+ +H S
Sbjct: 244 EVRLTDDQLTIQPFYPFLPQLSQKVNISYEKLCARMNNAFYIEEKMDGDRMILHFQDSRF 303
Query: 268 HYFSRSFLDHS-EYGHAMSKIIEQNVLVD-------RCILDGEMLVWDTSLNRFAEFGS- 318
+FSR D++ YG + L D +LDGEM+ WD FG+
Sbjct: 304 KFFSRRTKDYTLLYGASFQIGSLTKYLTDAFHPRVKSIVLDGEMVAWDFKRKVILPFGTL 363
Query: 319 -NQEIAKAARDGLSSD------RQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSK 371
+ +A R ++D + FDVL+V ++ + L R +LL+ ++
Sbjct: 364 KTSAVQEAVRQFTTTDVFEEQSAWPLFIVFDVLHVNGKNLTNHKLSYRKQLLRSLINEIP 423
Query: 372 GRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEP 431
+ E L G +P D+++ K I +R EG+V+K++ K+
Sbjct: 424 HKFELLPLMKG--------SDP---------DDIKLAIKNVISDRGEGLVIKNVDLKYHV 466
Query: 432 GDRSGKWLKLKPEYI-RAGSDLDVLIIG------GYYGSGRRGGEVAQFLVALAERPAPD 484
R W+K+KPEY+ + G +LD++IIG Y G R E
Sbjct: 467 AQRDNSWVKVKPEYLEQFGENLDLVIIGLIPAVKNSYMCGLRDKENGNV----------- 515
Query: 485 TYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWI 544
F SFC V G ++ E D + +L K+ K PP + +++PD WI
Sbjct: 516 -----FKSFCTVANGFTEGEFDR-LERLTA--GKWNNLKTNPPP-TDLIQFGRKKPDFWI 566
Query: 545 ESPEKSIILSITS-DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+P S+ L I + I E ++ +L R+R DK DC+ +Q + E+
Sbjct: 567 -NPNDSVALEIKARSIDVSLEETYAVGTTLHNLYCRRIRDDKLIEDCVTLQEYREM 621
>gi|410914952|ref|XP_003970951.1| PREDICTED: DNA ligase 3-like [Takifugu rubripes]
Length = 983
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 149/521 (28%), Positives = 244/521 (46%), Gaps = 65/521 (12%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E++ L RLA E+ + L + KK + ++K II ++ DLK+ K +
Sbjct: 353 LTIQEVDASLTRLAQLTKEDEQQTELEFIAKKCTSNDLKCIIRLVKHDLKMNSGAKHVLD 412
Query: 184 EFHPDAEDLFNVTCDLKLVCEK-LKDR----NQRHKRQDIEVGKA----VRPQLAMRIGD 234
P+A D F + +L V ++ LK++ N R+ + V + V+P LA
Sbjct: 413 AVDPNAYDAFKASRNLGDVIDRVLKNQQEASNGSGPRKLLTVEASLMTPVQPMLAEACKS 472
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 473 VEYAMKKCPNG-MYSEIKYDGERVQVHKNGDNFSYFSRSLKPVLPH-KVAHFKDYIPQAF 530
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ DT ++ FG+ KAA D ++C F FD +Y TS+
Sbjct: 531 PGGHSMILDAEVLLIDTQTSKPLPFGTLGIHKKAA----FQDAKVCLFVFDCIYFNGTSL 586
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + VP+ L S ++ + A D + + +E
Sbjct: 587 MERPLCERRKFLHDNM--------VEVPNRILFSEMK-----HVTRAADLADMITRVIRE 633
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G GG
Sbjct: 634 GL----EGLVLKDVKGMYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGKGSNGG 687
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSD-------EELDAVVTKLKPYFRKYEY 521
++ FL+ + PD+ +++ + + G D +ELD V +P
Sbjct: 688 IMSSFLMGCYD---PDS--KKWCTVTKCSGGYDDAMLARLQKELDVVKISKEP------- 735
Query: 522 PKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDR 580
P++ ++ N PD I +PE++ + IT +SE+ +A S+RFPR+ R
Sbjct: 736 --SKIPNWLKIVKNY--YPDFIIRNPEEAPVWEITG-AEFSKSEMHTADGISIRFPRMTR 790
Query: 581 VRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKP 621
+R DK W ++ EL S + G +DKP
Sbjct: 791 IRDDKDWKTATNLNQLKELYRISKENSAFKVTAGPSDNDKP 831
>gi|329765374|ref|ZP_08256954.1| DNA ligase I, ATP-dependent Dnl1 [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329138280|gb|EGG42536.1| DNA ligase I, ATP-dependent Dnl1 [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 578
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 156/558 (27%), Positives = 265/558 (47%), Gaps = 76/558 (13%)
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLIN--WRKGGAAPNAGNFPMVAAEVLQRRQ--GM 119
G++ V I A+ S S +A + I +RK G +A A+++L++++
Sbjct: 43 GVELGVAEKLAIRAIAKSAGSDNAEKKIEDEYRKSGDLGHA------ASKILEQKEQTTF 96
Query: 120 ISGGLTIKELNDLLDRLASSE-NRAE--KISVLSTLIKKTNAQEMKWIIMIILKDLKLGI 176
+ +T++ + + L +A E N+ + K+ +S L+ N +E K+I+ I+L L+LGI
Sbjct: 97 MVQDITVERVYENLVTIAKLEGNKTQDRKMKYISGLLNDANPEESKFILKILLGTLRLGI 156
Query: 177 SEKSIF----------HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ-DIEVGKAVR 225
+E ++ E E +NV+ DL V E + + + + +I + +R
Sbjct: 157 AENTVMDALAIAFTGNKENRKALEHAYNVSSDLGKVAETIASKGLKGIEEFEINLFNPIR 216
Query: 226 PQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMS 285
P LA R+ A KL G + E K DG+R+Q+H G ++ FSRS + + Y +
Sbjct: 217 PMLADRVKSEEEAIEKL-GTQFAAEYKLDGERVQLHIEGDKVVLFSRSLENITSYYPDIV 275
Query: 286 KIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCY----FAF 341
+ I + + ++ IL+ E + + + F F QE+ R L Y F
Sbjct: 276 EKIPKAIQANKVILEAEAVAINENSGEFLPF---QELMHRRRKYQIEKAVLQYPITVNFF 332
Query: 342 DVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHN 401
DVLY D S + K+R ELL+K+VK D+ HV P + +N
Sbjct: 333 DVLYYNDKSCLEFPYKKRRELLEKIVKED---------DYA--KHV-----PMT--IINN 374
Query: 402 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 460
+++E+F + +I + EG++LK L ++ G R WLKLK EY G LD+++IG +
Sbjct: 375 QEDIEEFLENSINSGCEGVMLKMLDKPYQAGSRGSYWLKLKREYRNELGDSLDLVVIGAF 434
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
+G GRR G+ L+A + D F S C+VGTG +D++LD + L +
Sbjct: 435 FGKGRRTGKYGTLLLA-----SYDYDRDMFTSICKVGTGFTDDDLDQLYQILSDKVTIKK 489
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI------RTIRSEVFS-APYSL 573
P+ +S+ DVW E PE +I + S+I + R+E+ +L
Sbjct: 490 NPRI----------DSEMEADVWFE-PE-LVIEIVASEITLSPIHKAARNEIRKDTGLAL 537
Query: 574 RFPRID-RVRYDKPWHDC 590
RFP+ ++R +K D
Sbjct: 538 RFPKFTGKIRLEKDPEDA 555
>gi|149248698|ref|XP_001528736.1| ATP-dependent DNA ligase [Lodderomyces elongisporus NRRL YB-4239]
gi|146448690|gb|EDK43078.1| ATP-dependent DNA ligase [Lodderomyces elongisporus NRRL YB-4239]
Length = 990
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 172/709 (24%), Positives = 312/709 (44%), Gaps = 104/709 (14%)
Query: 13 VSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVL 70
VS N Q +K +F+D++ + D F + +LI P ++ Y +KE+VL
Sbjct: 60 VSRNNLGQAKTITERKAQIINEFIDSFKLFIGQDMFPSAKLIFP--EKAGRLYFIKETVL 117
Query: 71 ANCLIDALGMSKDSADAVRLINW--------RKGGAAPNAGNFPMVAAEVLQRRQGMISG 122
A +I + KD+ D L +W R + P+ A+ V+ +R+ +
Sbjct: 118 ARHIIKMYNIPKDTEDYNLLYHWGKQYHKSKRFAVDERKIRDLPLQASRVIAKRRPITET 177
Query: 123 --GLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
++ ++N +LD L ++ E+ +L L K +E++W+I I+LK L +K
Sbjct: 178 FEEYSVPKINSILDDLTLAKKSQEQRELLQPLFNKLRIEEIRWLIHILLKKAILTHMDKY 237
Query: 181 IFHEFHPDAEDLFNVTCDLKLVCEKLKDR-NQRHKRQDIEVGK--AVRPQLAMRIGDAH- 236
F+ +HP L+++ +L+ L N+ + D+ + +PQLA ++ +
Sbjct: 238 FFNSWHPQGYRLYSLCNNLETTFNILGTYPNKEFTKADLSIHPRFKFKPQLAEKLSTGYD 297
Query: 237 AAWRKLHGKE------------------VVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS 278
+KL KE IE K DGDR+ +HK G+ ++SR D+S
Sbjct: 298 TVVKKLQKKEPMDPQYEAKYTAMGLESKFYIEEKMDGDRMLLHKEGNNFKFYSRRLKDYS 357
Query: 279 -EYGH-----AMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIA--KAARD 328
YG +++K + + V+ ILDGEM+ +D FG+ + +A ++ R
Sbjct: 358 FLYGETFQFGSLTKYLRDAFVKNVNSVILDGEMIAYDYERQVILPFGTLKSLAIQESVRQ 417
Query: 329 GLSSDR------QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
+ D+ Y FD++Y+ + + L R +L++++ P R E V D
Sbjct: 418 FTTIDQYDQQTSYPYYVIFDIVYLNGKDLSNYPLFFRKSILERIINPVPHRFE--VHDVR 475
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWE-PGDRSGKWLKL 441
L S ++E+ +E + +R EG+VLK K+ G R+ W+K+
Sbjct: 476 LGS---------------TAQDIERAIREVVTSRSEGLVLKHTQLKYVIDGFRNPNWIKV 520
Query: 442 KPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 500
KPEY+ G +LD+++I G+ ++V L Y SF + G
Sbjct: 521 KPEYLETFGENLDLVVI------GKNPATKNSYMVGLCNADDGSYY-----SFAMIANGF 569
Query: 501 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIR 560
EE D + + + + + KR PP + K++P WI +P+ S++L + +
Sbjct: 570 EVEEYDKI--ERLTHNKWIDCQKRLPPE--SIIKFGKKKPVYWI-NPKDSVVLEVKARSI 624
Query: 561 TIR-SEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
+R E ++ SL R+R DK ++CL +Q + +L + + +
Sbjct: 625 DVRPEETYAVGSSLHGNFCRRIREDKAVNECLTLQEYKKLKAEYSKNLHRPQT------- 677
Query: 620 KPKQFRSSRKGEKKNVSIVPSH---FLQTDVSDIKGETSIFSDMVFCIL 665
++RK +K +VS + S F + IK E+ +F F I+
Sbjct: 678 ------AARKRDKWSVSALGSFDDPFALQKLKKIKLESDLFFPFEFLIM 720
>gi|93003248|tpd|FAA00207.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 859
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 229/473 (48%), Gaps = 43/473 (9%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI +++D L+ L+ +++ +L L K++ +++ +I +I DLK+ K I
Sbjct: 274 LTIHDVDDFLENLSKLTREEDQLELLKKLAKRSTGNDLRTVIRLIKCDLKITAGPKHILD 333
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKA----VRPQLAMRIGDAHAAW 239
+A + F + DLK V +++++ N++ + +EV + V P LA A
Sbjct: 334 ALDSNAHEAFKASRDLKDVLDRIEE-NKKSGSKKLEVRASLMTPVSPMLAEACKSVEQAM 392
Query: 240 RKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYG--HAMSKIIEQNVLVDRC 297
+K + E K+DG+R+Q+H G + ++SRS S++ H I +
Sbjct: 393 KKCPNG-MYSEIKYDGERVQLHMKGKDFQFYSRSLKPVSDHKIMHFEKYIPDAFPDGHSM 451
Query: 298 ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLK 357
ILD E+L+ D FG+ I K ++ D +C F FD+L +++ +S+K
Sbjct: 452 ILDSEVLLVDVKTGNPLPFGT-LGIHKKSK---FQDANVCLFIFDILQFNGENLMGKSMK 507
Query: 358 ERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRD 417
ER +L+ +K ++P+ + S ++ +P D+++ I+
Sbjct: 508 ERRTILETSMK--------VIPNRVMLSELKFVNKP---------DDLKHMIVRVIKEGL 550
Query: 418 EGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFL 474
EG+VLKD+ +EPG R WLK+K +Y+ G D++++G YYG+G +GG ++ FL
Sbjct: 551 EGLVLKDIKGVYEPGKRH--WLKVKKDYLMQGQMADTADLVVLGAYYGTGSKGGMMSVFL 608
Query: 475 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN 534
+ + D R+ + +VG G DE L+ + +LK K + P + +
Sbjct: 609 MGVY-----DEKRERWCTVTKVGNGHDDETLEKINKQLK--VEKISKDMKRVPKWLNLNK 661
Query: 535 NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 587
N PD+ + P+ + + IT T + S+RFPR+ ++R DK W
Sbjct: 662 N--HVPDLVVADPKNAPVWEITGTEFTQSESHTAEGISIRFPRVTKIRRDKNW 712
>gi|448112033|ref|XP_004201992.1| Piso0_001463 [Millerozyma farinosa CBS 7064]
gi|359464981|emb|CCE88686.1| Piso0_001463 [Millerozyma farinosa CBS 7064]
Length = 759
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 144/530 (27%), Positives = 256/530 (48%), Gaps = 91/530 (17%)
Query: 124 LTIKELNDLLDRLASS---ENRAEKISVLSTLIKKTNAQ--EMKWIIMIILKDLKLGISE 178
L + + D L ++A + +++A+KIS+++ ++ +++ E K+I+ + L++G++E
Sbjct: 260 LDVDSVFDSLTKIAKATGKDSQAKKISLINKMLTACDSKTNEAKFIVRSLEGKLRIGLAE 319
Query: 179 KSIF------------------HEFHPDAEDL----FNVTCDLKLVCEKLKDRNQRHKRQ 216
K++ E AED+ F+ + +++ K + + +
Sbjct: 320 KTVLIALAQAFINWDKSIPKVTTEILAKAEDVIREAFSQIPNYEIIIMKAYEFGILNLLE 379
Query: 217 DIEV--GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGS-EIHYFSRS 273
+ G ++P LA + +E E K+DG+R Q+H S E+ +SR+
Sbjct: 380 HCHLTPGIPLKPMLAKPTKSVTEVMDRFQNEEFTCEYKYDGERAQVHVLSSGEVRIYSRN 439
Query: 274 FLDHSE-YGHAMSKIIEQNVL-------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA 325
D S+ Y +S I +++L + ILD E + WD N+ F Q ++
Sbjct: 440 SEDMSQRYPDLVS--ITKDILKLQDGSQISSLILDCEAVAWDREQNKILPF---QVLSTR 494
Query: 326 ARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
R + +C FAFD+LY D +I +SL ER ++L G+ +
Sbjct: 495 KRKDVEEKDIKVHICLFAFDILYYNDAPLITKSLTERRQVLYDNFNSITGKFQ------- 547
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWL 439
+H ++++DE+++F +++++ EG+++K L S +EP RS WL
Sbjct: 548 FATHKD----------SNDLDEIQQFLDQSVKDSCEGLMIKMLNGVDSYYEPSKRSRNWL 597
Query: 440 KLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
KLK +Y+ G LD+++IG Y G G+R G FL+A + +T + + C++GT
Sbjct: 598 KLKKDYLSGVGDSLDLVVIGAYIGKGKRTGTYGGFLLA-----SYNTDTGEYETTCKIGT 652
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G SDE+L ++ KLKP + + PK P + T+NS +PDVW+E ++ +T+D
Sbjct: 653 GFSDEDLASLHAKLKP--TEIDTPK---PYYVYDTSNSNAQPDVWLEP--TTVFEVLTAD 705
Query: 559 IRTIRSEVFSAPY-------SLRFPRIDRVRYDKPWHDC---LDVQSFVE 598
+ S ++ A + SLRFPR RVR DK D DV F E
Sbjct: 706 LSL--SPIYKAAFQQYGKGISLRFPRFIRVRDDKGVEDATTSTDVSEFYE 753
>gi|345107342|ref|YP_004821507.1| ATP-dependent DNA ligase [Yoka poxvirus]
gi|344267416|gb|AEN03743.1| ATP-dependent DNA ligase [Yoka poxvirus]
Length = 551
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 233/482 (48%), Gaps = 43/482 (8%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LT+K++++ L L++ + +I +L+++ + + + ++K IIM+I KDLK+ + + +
Sbjct: 107 LTLKDVDEFLTYLSNETKESRQIKLLTSITRVSTSNDLKCIIMLISKDLKIKAGPRYVLN 166
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLH 243
++ D+F +L+ V + K + H I V + P LA A++K
Sbjct: 167 AISDNSYDIFRKKNNLQYVVDNAK---ELHNNITINVMTPINPMLAESCESVDKAFKKFP 223
Query: 244 GKEVVIECKFDGDRIQIHKNGSEIHYFSRSF--LDHSEYGHAMSKIIEQNVLVDRCILDG 301
+ E K+DG+R+Q+HKNG+ +FSR+ + + + I + V ILD
Sbjct: 224 NG-IFAEIKYDGERVQVHKNGNHFAFFSRNMKPVTKHKVDYLNEYIPKAFKNVSSLILDS 282
Query: 302 EMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHE 361
E+++ D + N+ FGS + +D LC F FD L+ + L +R
Sbjct: 283 EIVLVDKN-NKPLPFGS----LGIHKKKEYNDSSLCLFVFDCLFFDGFDMTDIPLNDRRS 337
Query: 362 LLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIV 421
+LQ+++ +P+ + S + V ++++ + + EG+V
Sbjct: 338 ILQEII--------VEIPNRIMLSEL---------YVVKEINQLSNILDNVLSQKLEGLV 380
Query: 422 LKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALA 478
+KD+ S + PG R KWLK+K +Y+ G+ +D++++G YYG G +GG +A FL+
Sbjct: 381 VKDINSSYLPGKR--KWLKIKKDYLNNGALADSIDLVVLGAYYGKGSKGGIMAVFLMGCY 438
Query: 479 ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKE 538
+ + + ++ C +G DE L+ + T L + + PK+ P + N
Sbjct: 439 D---DNDCKWKTVTKC---SGHDDETLNYLQTHLN-MIKINKDPKKIPD---WLIVNKIY 488
Query: 539 RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVE 598
PD I P++S + I T +A S+RFPR R+R+DK W ++ ++
Sbjct: 489 YPDFVINDPKESQVWEIIGSDFTSSKFHTAAGISIRFPRFSRIRHDKDWKTSTYLKDIIK 548
Query: 599 LV 600
++
Sbjct: 549 II 550
>gi|406601860|emb|CCH46521.1| DNA ligase 1 [Wickerhamomyces ciferrii]
Length = 768
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 153/599 (25%), Positives = 266/599 (44%), Gaps = 109/599 (18%)
Query: 57 DRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRR 116
D E GL E++L + ++ G + A +R+ G+ VA + +
Sbjct: 215 DYEGLELGLGETILIKTISESTGKNTQHVKA----KYRE------IGDLGTVALQARSVQ 264
Query: 117 QGMISGG-LTIKELNDLLDRLASS---ENRAEKISVLSTLIKKTNAQEMKWIIMIILKDL 172
M LT+ + D L +++ + +++ +KI+++ ++ + E K++I + L
Sbjct: 265 PTMFKPKPLTVDTVFDNLKQISKASGKDSQTKKINIIKRMLTASQGLEAKFLIRSLESKL 324
Query: 173 KLGISEKSI----------FHEFH---------------------------PDAEDLFNV 195
++G++EK++ F + + P+ E L N
Sbjct: 325 RIGLAEKTVLISLAKALATFEQLNQGKKQERISPDLFIKAEEAIRDAFCQVPNYEVLINT 384
Query: 196 TCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDG 255
+ ++ KL D ++ G ++P LA + +G+E E K+DG
Sbjct: 385 AIEHGVL--KLGDHCT------LKPGIPLKPMLAKPTKSVGEVLDRFNGEEFTCEYKYDG 436
Query: 256 DRIQIHK-NGSEIHYFSRSFLDHSE-YGHAMSKI---IEQNVLVDRCILDGEMLVWDTSL 310
+R Q+H N E+ +SR+ D S+ Y + + ++ + ILD E + WD
Sbjct: 437 ERAQVHLLNNGEVKVYSRNSEDMSQRYPDIIDSVKGFLKPDQDTKSLILDCEAVAWDRVD 496
Query: 311 NRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVV 367
+ F Q ++ R +S++ Q+C FAFD+L D +I + L+ER L KV+
Sbjct: 497 EKILPF---QVLSTRKRKDVSTEDIKVQVCLFAFDMLCYNDEPLISKPLRERRNQLYKVL 553
Query: 368 KPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGS 427
P G+ + S + +VDE++ F E++++ EG+++K L S
Sbjct: 554 NPIPGKFQF-----------------ATSKITSDVDELQTFLDESVKSACEGLMVKTLDS 596
Query: 428 -KWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDT 485
+ P RS WLKLK +Y+ G LD+++IG YYG G+R G FL+A + + +
Sbjct: 597 DPYRPSQRSNSWLKLKKDYLEGVGDSLDLVVIGAYYGRGKRTGTYGGFLLASYNQDSGE- 655
Query: 486 YPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE 545
+ + C++GTG SDE L + KL + E PK + T +S PDVW E
Sbjct: 656 ----YETCCKIGTGFSDEMLKTLYEKLSK--TEIEDPKS------EFTFDSSAEPDVWFE 703
Query: 546 SPEKSIILSITSD-----IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
++ +T+D + +EVF SLRFPR R+R DK D VE
Sbjct: 704 P--STLFEVLTADLSLSPVYKAGAEVFGRGVSLRFPRFLRIRDDKSPEDATSSDQVVEF 760
>gi|198417566|ref|XP_002129234.1| PREDICTED: Zn-finger (NAD(+) ADP-ribosyltransferase)-2 [Ciona
intestinalis]
Length = 854
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 229/473 (48%), Gaps = 43/473 (9%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI +++D L+ L+ +++ +L L K++ +++ +I +I DLK+ K I
Sbjct: 269 LTIHDVDDFLENLSKLTREEDQLELLKKLAKRSTGNDLRTVIRLIKCDLKITAGPKHILD 328
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKA----VRPQLAMRIGDAHAAW 239
+A + F + DLK V +++++ N++ + +EV + V P LA A
Sbjct: 329 ALDSNAHEAFKASRDLKDVLDRIEE-NKKSGSKKLEVRASLMTPVSPMLAEACKSVEQAM 387
Query: 240 RKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYG--HAMSKIIEQNVLVDRC 297
+K + E K+DG+R+Q+H G + ++SRS S++ H I +
Sbjct: 388 KKCPNG-MYSEIKYDGERVQLHMKGKDFQFYSRSLKPVSDHKIMHFEKYIPDAFPDGHSM 446
Query: 298 ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLK 357
ILD E+L+ D FG+ I K ++ D +C F FD+L +++ +S+K
Sbjct: 447 ILDSEVLLVDVKTGNPLPFGT-LGIHKKSK---FQDANVCLFIFDILQFNGENLMGKSMK 502
Query: 358 ERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRD 417
ER +L+ +K ++P+ + S ++ +P D+++ I+
Sbjct: 503 ERRTILETSMK--------VIPNRVMLSELKFVNKP---------DDLKHMIVRVIKEGL 545
Query: 418 EGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFL 474
EG+VLKD+ +EPG R WLK+K +Y+ G D++++G YYG+G +GG ++ FL
Sbjct: 546 EGLVLKDIKGVYEPGKRH--WLKVKKDYLMQGQMADTADLVVLGAYYGTGSKGGMMSVFL 603
Query: 475 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN 534
+ + D R+ + +VG G DE L+ + +LK K + P + +
Sbjct: 604 MGVY-----DEKRERWCTVTKVGNGHDDETLEKINKQLK--VEKISKDMKRVPKWLNLNK 656
Query: 535 NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 587
N PD+ + P+ + + IT T + S+RFPR+ ++R DK W
Sbjct: 657 N--HVPDLVVADPKNAPVWEITGTEFTQSESHTAEGISIRFPRVTKIRRDKNW 707
>gi|15920405|ref|NP_376074.1| ATP-dependent DNA ligase [Sulfolobus tokodaii str. 7]
gi|20137895|sp|Q976G4.1|DNLI_SULTO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|15621187|dbj|BAB65183.1| DNA ligase [Sulfolobus tokodaii str. 7]
Length = 600
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 147/518 (28%), Positives = 251/518 (48%), Gaps = 65/518 (12%)
Query: 109 AAEVLQRRQGMISGGLTIKELNDLLDR--LASSE-NRAEKISVLSTLIKKTNAQEMKWII 165
+A +L + GLT++E + L + LAS E +R KI L+ L+KK + E K+I+
Sbjct: 104 SASILSFLGAQSNEGLTVEETYESLTKIALASGEGSRDIKIRSLAGLLKKASPLEAKYIV 163
Query: 166 MIILKDLKLGISEKSIFH----------EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKR 215
+ L++GI + +I F P E +N+ DL + K+ +
Sbjct: 164 RFVDGRLRVGIGDATIMDALSTAFTGSTSFRPLIERAYNLRADLGNIA-KIIAQQGVEAL 222
Query: 216 QDI--EVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRS 273
+DI +VG +RP LA R+ D K+ G E +++ K+DG+R QIHK E++ FSR
Sbjct: 223 KDIKPQVGIPIRPMLAERMSDPAEILAKVGG-EALVDYKYDGERAQIHKKDKEVYIFSRR 281
Query: 274 FLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD 333
+ + + + + + + + I++GE++ D N F QE+ R ++
Sbjct: 282 LENITRMYPDVVEYVREYINANEVIIEGEIVAVDPESNEIRPF---QELMHRKRKNDINE 338
Query: 334 RQLCY----FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Y + FD++ D + L ER + L++V+KP+ H+
Sbjct: 339 AIKEYPVNVYLFDLMLYEDADYTMKPLPERRKKLEEVIKPND------------KLHI-- 384
Query: 390 QGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIR 447
+ +NVD++ +FF + I N EG+++K + S ++ G R W+KLK +Y
Sbjct: 385 ----AHHIYTNNVDKLMEFFYDAISNGAEGVMVKSVAKDSIYQAGSRGFLWIKLKRDYQS 440
Query: 448 AGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 506
+D +D++++G +YG G+RGG+++ L+A A P DT F + C+V +G SD ELD
Sbjct: 441 EMADSVDLVVVGAFYGRGKRGGKLSSLLMA-AYDPETDT----FKTVCKVASGFSDAELD 495
Query: 507 AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS--IT-SDIRTIR 563
+ KL + + K+ P +S+ PD+W+E + I+ IT S T
Sbjct: 496 ELQKKL----MEIKLDKKDP------RVDSQLEPDIWVEPKYVAEIIGAEITLSPEHTCC 545
Query: 564 SEVFS--APYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
++ S A S+RFPR R R DK D + E+
Sbjct: 546 KDMVSKGAGLSVRFPRFIRWRDDKSIEDATTPKEIYEM 583
>gi|444320241|ref|XP_004180777.1| hypothetical protein TBLA_0E02050 [Tetrapisispora blattae CBS 6284]
gi|387513820|emb|CCH61258.1| hypothetical protein TBLA_0E02050 [Tetrapisispora blattae CBS 6284]
Length = 720
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 147/551 (26%), Positives = 252/551 (45%), Gaps = 80/551 (14%)
Query: 91 INWRKGGAAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLASSE---NRAEKI 146
+ +RK G + G M + VLQ M LTI ++ D L ++A+S+ ++ +KI
Sbjct: 199 LQYRKLG---DLGQLAM-STRVLQPTITMFKLEPLTITKVFDTLAKIAASQGKDSQNQKI 254
Query: 147 SVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEF------------------HPD 188
+++ L+ E K++I + L++G++EK++ + +
Sbjct: 255 NMIKRLLTSCQGVEAKFLIRSLESKLRIGLAEKTVLTSLARALVIHEKGNDNIQDDDYSN 314
Query: 189 AEDLFNVT-CDLK----LVCEKLK-DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
AE + + C + ++ L+ +Q + G ++P LA
Sbjct: 315 AEQIIKDSFCQIPNYEIIITTSLQYGVSQLASHIKLTPGIPLKPMLAKPTKSISEVLDTF 374
Query: 243 HGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVD----- 295
+ E K+DG+R Q+H +GS + +SR+ D ++ ++ Q+ LVD
Sbjct: 375 QNIQFTSEYKYDGERAQVHLLPDGS-MRIYSRNGEDMTQRYPELNI---QDYLVDSTTTT 430
Query: 296 RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQS 355
+ ILD E + WD L + F + + D ++C FAFD+L + S+I+ +
Sbjct: 431 QLILDCEAVAWDVELQKILPFQVLSTRKRKSVDLKDIKVRVCLFAFDILRHNNDSLINNT 490
Query: 356 LKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN 415
L+ER ++L + KP G+ + L N+DE++ F + I++
Sbjct: 491 LRERRDILHSITKPCPGQFQFAT-----------------ELTTSNLDELQTFLDKAIKD 533
Query: 416 RDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVA 471
EG+++K L S +EP RS WLKLK +Y++ G LD+ ++G YYG G+R G
Sbjct: 534 SCEGLMVKSLDGTDSHYEPSKRSRNWLKLKKDYLQGMGDSLDLCVLGAYYGRGKRTGTYG 593
Query: 472 QFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQ 531
FL+A + DT F + C++GTG SDE L + LK E +P + +
Sbjct: 594 GFLLACYNQ---DT--EEFETCCKIGTGFSDEMLQTLYNGLK------ETAIESPRANF- 641
Query: 532 VTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWH 588
V ++S E PDVW +L+ S I S V+ SLRFPR R+R DK +
Sbjct: 642 VFDSSAE-PDVWFNPTMVFEVLTADLSLSPIYKAGSTVYGKGISLRFPRFIRIRTDKSVN 700
Query: 589 DCLDVQSFVEL 599
D + ++
Sbjct: 701 DATSSEQVIDF 711
>gi|156375378|ref|XP_001630058.1| predicted protein [Nematostella vectensis]
gi|156217071|gb|EDO37995.1| predicted protein [Nematostella vectensis]
Length = 894
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 240/500 (48%), Gaps = 59/500 (11%)
Query: 123 GLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
LT+++++ LDRL ++ L ++ ++ + ++K+II +I DL++ K +
Sbjct: 319 NLTLQQVDSFLDRLKLLTKEDDQQRELCSITQRCTSNDLKYIIRLIKHDLRMNAGAKHVL 378
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDR-----NQR----HKRQDIEVG--KAVRPQLAMR 231
PDA F + DL+ V ++ ++ N R K+ I V+P LA
Sbjct: 379 EAIDPDAYKAFQASNDLEDVVKRCLEKHASSGNDRVPGMSKKLSIRASLMTPVKPMLAEA 438
Query: 232 IGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDH--SEYGHAMSK 286
A +K K ++ E K+DG+R+Q+HK+GS+ +FSRS L H S + + K
Sbjct: 439 CKTFSYAIKKC-PKGMLAEIKYDGERVQVHKSGSKFEFFSRSLKPVLPHKVSAFRDFLPK 497
Query: 287 IIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYV 346
+ ILD E+L+ D + FG+ K+A D +C F FD L
Sbjct: 498 ACPHG---NNLILDCEVLLVDNKTSLPLPFGTLGIHKKSA----FKDANVCLFIFDCLQF 550
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
+ +V+ +S+ ER ++L++ V T++P+ + S + + ++
Sbjct: 551 NEENVMRKSMTERRKILEENV--------TVIPNRIMLSE---------TTFVKDEKKLS 593
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGS 463
+ + + EG+VLKD+ ++EPG R WLK+K +Y+ GS D++++G YYG+
Sbjct: 594 QLMARAMRDGLEGLVLKDVTGQYEPGKRH--WLKMKKDYLEEGSMADTADLVVLGAYYGT 651
Query: 464 GRRGGEVAQFLVALAERPAPDTYPR--RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 521
G +GG ++ FL+ + PR ++ + + G G D+ LD + +LK +K
Sbjct: 652 GNKGGLMSVFLMGVFN-------PRIKKWCTVAKCGNGHDDKTLDKLNRELK--VKKISK 702
Query: 522 PKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 581
P + +V + PD ++ P+K+ + IT + + + S+RFPR+ R+
Sbjct: 703 DPNRVPVWLEV--HRSLIPDFVVDDPKKAPVWEITGAEFSKSTTHTADGISIRFPRVTRI 760
Query: 582 RYDKPWHDCLDVQSFVELVH 601
R DK W D+ +VH
Sbjct: 761 RDDKDWETATDLDLLKPVVH 780
>gi|348531984|ref|XP_003453487.1| PREDICTED: DNA ligase 3 [Oreochromis niloticus]
Length = 1012
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 147/496 (29%), Positives = 234/496 (47%), Gaps = 59/496 (11%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E++ L RL+ E+ + L + KK + ++K I+ +I DLK+ K +
Sbjct: 376 LTIQEVDASLTRLSQLTKEDEQQNELEDIAKKCTSNDLKCIVRLIKHDLKMNAGAKHVLD 435
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRH--------KRQDIEVG--KAVRPQLAMRIG 233
P+A D F + +L V E++ RNQ+ K IE V+P LA
Sbjct: 436 AVDPNAYDAFKASRNLGDVIERVL-RNQQEASNGSGPKKLLTIEASLMTPVQPMLAEACK 494
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HKNG +YFSRS L H + H I +
Sbjct: 495 SIEYAMKKCPNG-MYSEIKYDGERVQVHKNGDNFNYFSRSLKPVLPH-KVAHFKEYIPQA 552
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ DT ++ FG+ KAA D +C F FD +Y S
Sbjct: 553 FPGGHSMILDAEVLLIDTKTSKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNGVS 608
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNS---HVRPQGEPCWSLVAHNVDEVEK 407
++ + L ER + L + VP+ L S HV G+ D + +
Sbjct: 609 LMERPLCERRKFLHDNM--------VEVPNRILFSEMKHVTRAGD--------LADMITR 652
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSG 464
+E + EG+VLKD+ S +EPG R WLK+K +Y+ G+ D++++G +YG G
Sbjct: 653 VIREGL----EGLVLKDVKSTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGKG 706
Query: 465 RRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 524
GG ++ FL+ + PD+ ++ C +G D+ + A + K + + P +
Sbjct: 707 SNGGIMSSFLMGCYD---PDSKKWCTVTKC---SGGYDDAMLARLQKELDMIKISKDPSK 760
Query: 525 APPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRY 583
PS+ ++ N PD I PE + + IT +SE+ +A S+RFPR+ R+R
Sbjct: 761 I-PSWLKIIKNY--YPDFIIRDPENAPVWEITG-AEFSKSEMHTADGISIRFPRMTRIRD 816
Query: 584 DKPWHDCLDVQSFVEL 599
DK W ++ EL
Sbjct: 817 DKDWKSATNLHQLKEL 832
>gi|156847073|ref|XP_001646422.1| hypothetical protein Kpol_2001p71 [Vanderwaltozyma polyspora DSM
70294]
gi|156117098|gb|EDO18564.1| hypothetical protein Kpol_2001p71 [Vanderwaltozyma polyspora DSM
70294]
Length = 726
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 139/529 (26%), Positives = 242/529 (45%), Gaps = 84/529 (15%)
Query: 124 LTIKELNDLLDRLASSENR---AEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ E+ L +A S+ + K+ ++ ++ E K++I + L++G++EK+
Sbjct: 230 LTVGEVFQNLKDIAQSQGKDSQQRKMRLIKRMLTACKGVEAKFLIRSLESKLRIGLAEKT 289
Query: 181 IF---------HEFH----PDAE----------DLFNVTCDLKLVCEKLKDRNQRHKRQD 217
+ +E+ P E D F + +++ + + +
Sbjct: 290 VLISLSKALLLNEYETSKDPSMELIETAEEKIRDAFCQVPNYEIIIQSCLNDGIMELDNN 349
Query: 218 IEV--GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRS 273
++ G ++P LA + G+E E K+DG+R Q+H NG E+ +SR+
Sbjct: 350 CKLRPGIPLKPMLAKPTKAINEVLDAFQGEEFTCEYKYDGERGQVHLLSNG-EMRIYSRN 408
Query: 274 FLDHSEYG---HAMSKIIEQNVLVDR---CILDGEMLVWDTSLNRFAEFGSNQEIAKAAR 327
+ +E H +++ D+ ILD E++ WD N+ F Q ++ R
Sbjct: 409 GENMTERYPELHIEDFLVKDESNTDKEVSLILDCEVVAWDNEQNKILPF---QVLSTRKR 465
Query: 328 DGLS---SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLN 384
G+ ++C FAFD+LY +I ++L+ER ++L +V K G +
Sbjct: 466 KGVELKDVKVRVCLFAFDILYYNGEGLITKTLRERRKILHEVTKCVPGEFQYAT------ 519
Query: 385 SHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKL 441
SL+ +DE++KF + I++ EG+++K L S++EP RS WLKL
Sbjct: 520 -----------SLITAELDEIQKFLDQAIKDSCEGLMVKILDGEESRYEPSKRSRNWLKL 568
Query: 442 KPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 500
K +Y+ G LD+ ++G YYG G+R G FL+ + + + + + C++GTG
Sbjct: 569 KKDYLAGVGDSLDLCVMGAYYGKGKRTGTYGGFLLGCYNQDSGE-----YETCCKIGTGF 623
Query: 501 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD-- 558
SDE ++TKL FR+ E P SFY +S PD+W E K + +T+D
Sbjct: 624 SDE----MLTKLYELFREEEI--EVPKSFYNF--DSSAEPDIWFEP--KVLFEVLTADLS 673
Query: 559 ---IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSN 604
I S + SLRFPR R+R DK D +E+ + +
Sbjct: 674 LSPIYKAGSATYDKGISLRFPRFLRIRDDKSVEDATSSDQIIEMYENQS 722
>gi|57525295|ref|NP_001006215.1| DNA ligase 3 [Gallus gallus]
gi|53128173|emb|CAG31277.1| hypothetical protein RCJMB04_4j11 [Gallus gallus]
Length = 902
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 227/497 (45%), Gaps = 53/497 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L +L+ ++ SVL + ++ ++K II +I DLK+ K +
Sbjct: 283 LTIQEVDEFLIQLSKLTKEDDQQSVLQDITRRCTGNDLKCIIRLIKHDLKMNAGAKHVLD 342
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKA----------VRPQLAMRIG 233
P+A + F + +L+ V E++ RNQ+ + V + V+P LA
Sbjct: 343 ALDPNAYEAFKASRNLQDVVERVL-RNQQDAEKTPGVKRTLSVQASLMTPVQPMLAEACK 401
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 402 SIEYAMKKCPNG-MYAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDFIPQA 459
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ D + FGS KAA D +C F FD +Y D S
Sbjct: 460 FPGGHSMILDSEVLLIDNKTGKPLPFGSLGVHKKAA----FQDANVCLFVFDCIYFNDIS 515
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L+ER + L + +E PD L R H ++
Sbjct: 516 LMDRPLRERRKFLHDNM------VEIPNPDPVLGDEAR-----------HKSFRSGRYDH 558
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRG 467
I EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +G
Sbjct: 559 RVIREGLEGLVLKDIKGNYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGKGSKG 616
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G ++ FL+ D ++ + + G D L + T+L + + P + P
Sbjct: 617 GMMSIFLMGCY-----DPTSEKWCTVTKCAGGHDDATLARLQTELD-MVKISKDPSKI-P 669
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKP 586
S+ ++ N PD + P+K+ + IT ++E +A S+RFPR R+R DK
Sbjct: 670 SWLKI--NKIYYPDFIVPDPKKAPVWEITG-AEFSKAEAHTADGISIRFPRCTRIRDDKD 726
Query: 587 WHDCLDVQSFVELVHSS 603
W ++ EL S
Sbjct: 727 WKTATNLPQLKELYQLS 743
>gi|281341925|gb|EFB17509.1| hypothetical protein PANDA_012829 [Ailuropoda melanoleuca]
Length = 1015
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 142/499 (28%), Positives = 235/499 (47%), Gaps = 57/499 (11%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 373 LTIQEVDEFLLRLSRLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNAGAKHVLD 432
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRH------KRQDIEVGKA----VRPQLAMRIG 233
P+A + F + +L+ V E++ RN++ +R+ + V + V+P LA
Sbjct: 433 ALDPNAYEAFKASRNLQDVVERVL-RNEQEVEKEPGRRRALSVQASLMTPVQPMLAEACK 491
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HKNG +YFSRS L H + H I +
Sbjct: 492 SIEHAMKKCPNG-MFSEIKYDGERVQVHKNGDRFNYFSRSLKPVLPH-KVAHFKDYIPQA 549
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ DT + FG+ KAA D +C F FD +Y D S
Sbjct: 550 FPGGHSMILDSEVLLIDTKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVS 605
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L ER + L + +P+ + S ++ + A D + + +
Sbjct: 606 LMDRPLCERRKFLHDNM--------VEIPNRIMFSEMKQVTK-----AADLADMINRVIR 652
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRG 467
E + EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +G
Sbjct: 653 EGL----EGLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 706
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP- 526
G ++ FL+ + PD+ +C V T S DA + +L+ + K
Sbjct: 707 GMMSIFLMGCYD---PDSQ-----KWCTV-TKCSGGHDDATLARLQKELDMVKISKDPSK 757
Query: 527 -PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYD 584
PS+ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R D
Sbjct: 758 IPSWLKI--NKTYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDD 814
Query: 585 KPWHDCLDVQSFVELVHSS 603
K W ++ EL S
Sbjct: 815 KDWKSATNLPQLKELYQLS 833
>gi|301776466|ref|XP_002923661.1| PREDICTED: DNA ligase 3-like [Ailuropoda melanoleuca]
Length = 996
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 142/499 (28%), Positives = 235/499 (47%), Gaps = 57/499 (11%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 373 LTIQEVDEFLLRLSRLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNAGAKHVLD 432
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRH------KRQDIEVGKA----VRPQLAMRIG 233
P+A + F + +L+ V E++ RN++ +R+ + V + V+P LA
Sbjct: 433 ALDPNAYEAFKASRNLQDVVERVL-RNEQEVEKEPGRRRALSVQASLMTPVQPMLAEACK 491
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HKNG +YFSRS L H + H I +
Sbjct: 492 SIEHAMKKCPNG-MFSEIKYDGERVQVHKNGDRFNYFSRSLKPVLPH-KVAHFKDYIPQA 549
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ DT + FG+ KAA D +C F FD +Y D S
Sbjct: 550 FPGGHSMILDSEVLLIDTKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVS 605
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L ER + L + +P+ + S ++ + A D + + +
Sbjct: 606 LMDRPLCERRKFLHDNM--------VEIPNRIMFSEMKQVTK-----AADLADMINRVIR 652
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRG 467
E + EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +G
Sbjct: 653 EGL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 706
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP- 526
G ++ FL+ + PD+ +C V T S DA + +L+ + K
Sbjct: 707 GMMSIFLMGCYD---PDSQ-----KWCTV-TKCSGGHDDATLARLQKELDMVKISKDPSK 757
Query: 527 -PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYD 584
PS+ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R D
Sbjct: 758 IPSWLKI--NKTYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDD 814
Query: 585 KPWHDCLDVQSFVELVHSS 603
K W ++ EL S
Sbjct: 815 KDWKSATNLPQLKELYQLS 833
>gi|307214733|gb|EFN89653.1| DNA ligase 3 [Harpegnathos saltator]
Length = 1035
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 135/494 (27%), Positives = 231/494 (46%), Gaps = 51/494 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI++++ L+RL+ E+I T+I K A ++K I+ ++ DL++ K I
Sbjct: 285 LTIQDVDLFLERLSHLTKEEEQIQHFRTVIDKCTANDLKMIVRLVKHDLRINAGPKHILE 344
Query: 184 EFHPDAEDLFNVTCDLKLVCEK----LKDRNQRHK---------RQDIEVGKAVRPQLAM 230
H DA F ++ DL+ V + LKD+++ + + + V P LA
Sbjct: 345 GIHEDAYKAFQMSRDLETVVRRFWPDLKDQDKSSISGSPSSSCDKVALSLMTPVLPMLAE 404
Query: 231 RIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSK--II 288
A RK ++ E K+DG+R+Q+HK+G+E YFSRS + + K I
Sbjct: 405 ACTSVEMAMRKCPNG-MLSEVKYDGERVQVHKSGNEFRYFSRSLKPVMPHKVNLFKDYIA 463
Query: 289 EQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGD 348
D ILD E+L+ D + FG+ I K A+ + +C F FD LY
Sbjct: 464 RAFPDGDDLILDSEILMVDNETGQPLPFGT-LGIHKKAK---FKNANVCLFVFDCLYYNG 519
Query: 349 TSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKF 408
++++++ ER +L+ + T +P+ + S V H+ ++ K
Sbjct: 520 EILMNKTMSERRRILRDRI--------TEIPNRIMLSEVHE---------VHDPQDLTKM 562
Query: 409 FKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGR 465
+ ++ EG+VLKD+ SK+EPG R WLK+K +Y+ G+ D++++G +YG+G
Sbjct: 563 IVKVLKQGLEGLVLKDINSKYEPGKRH--WLKVKKDYLCGGAMADSADLVVLGAWYGTGN 620
Query: 466 RGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA 525
+GG ++ FL+ D ++++ +V TG D L A+ +L K
Sbjct: 621 KGGMMSIFLMGCY-----DEKSDKWLTVTKVHTGHDDATLAALQNELD--MVKIGKDTEK 673
Query: 526 PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
P + + PD + P+K + IT T + + S+RFPR+ R+R+DK
Sbjct: 674 LPDW--LLAKKPMVPDFVAKDPKKQPVWEITGAEFTNQGVHTADGISIRFPRVTRIRHDK 731
Query: 586 PWHDCLDVQSFVEL 599
W + EL
Sbjct: 732 NWSTATTLNELREL 745
>gi|448114611|ref|XP_004202619.1| Piso0_001463 [Millerozyma farinosa CBS 7064]
gi|359383487|emb|CCE79403.1| Piso0_001463 [Millerozyma farinosa CBS 7064]
Length = 759
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 140/511 (27%), Positives = 247/511 (48%), Gaps = 88/511 (17%)
Query: 140 ENRAEKISVLSTLIKKTNAQ--EMKWIIMIILKDLKLGISEKSIF--------------- 182
+++A+KIS+++ ++ +++ E K+I+ + L++G++EK++
Sbjct: 279 DSQAKKISLINKMLTACDSKTNEAKFIVRSLEGKLRIGLAEKTVLIALAQAFINWDKSIP 338
Query: 183 ---HEFHPDAEDL----FNVTCDLKLVCEKLKDRNQRHKRQDIEV--GKAVRPQLAMRIG 233
E AED+ F+ + +++ K + + + + G ++P LA
Sbjct: 339 KVTTEILAKAEDVIREAFSQIPNYEIIIMKAYEFGILNLLEHCHLTPGIPLKPMLAKPTK 398
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGS-EIHYFSRSFLDHSE-YGHAMSKIIEQN 291
+ +E E K+DG+R Q+H S E+ +SR+ D S+ Y +S I ++
Sbjct: 399 SVTEVMDRFQNEEFTCEYKYDGERAQVHVLSSGEVRIYSRNSEDMSQRYPDLVS--ITKD 456
Query: 292 VL-------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAF 341
+L + ILD E + WD N+ F Q ++ R + +C FAF
Sbjct: 457 ILKLQDGSQISSMILDCEAVAWDREQNKILPF---QVLSTRKRKDVEEKDIKVHICLFAF 513
Query: 342 DVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHN 401
D+LY D +I +SL ER ++L G+ + +H +++
Sbjct: 514 DILYYNDAPLITKSLTERRKVLYDNFNSITGKFQ-------FATHKD----------SND 556
Query: 402 VDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 457
+DE+++F +++++ EG+++K L S +EP RS WLKLK +Y+ G LD+++I
Sbjct: 557 LDEIQQFLDQSMKDSCEGLMIKMLNGVDSYYEPSKRSRNWLKLKKDYLSGVGDSLDLVVI 616
Query: 458 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 517
G Y G G+R G FL+A + +T + + C++GTG SDE+L ++ KLKP
Sbjct: 617 GAYIGKGKRTGTYGGFLLA-----SYNTDTGEYETTCKIGTGFSDEDLASLHAKLKP--T 669
Query: 518 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY------ 571
+ + PK P + T+NS +PDVW+E ++ +T+D+ S ++ A +
Sbjct: 670 EIDTPK---PYYVYDTSNSNAQPDVWLEP--TTVFEVLTADLSL--SPIYKAAFQQYGKG 722
Query: 572 -SLRFPRIDRVRYDKPWHDC---LDVQSFVE 598
SLRFPR RVR DK D DV F E
Sbjct: 723 ISLRFPRFIRVRDDKGVEDATSSTDVSEFYE 753
>gi|227828207|ref|YP_002829987.1| ATP-dependent DNA ligase [Sulfolobus islandicus M.14.25]
gi|227830966|ref|YP_002832746.1| ATP-dependent DNA ligase [Sulfolobus islandicus L.S.2.15]
gi|229585436|ref|YP_002843938.1| ATP-dependent DNA ligase [Sulfolobus islandicus M.16.27]
gi|238620398|ref|YP_002915224.1| ATP-dependent DNA ligase [Sulfolobus islandicus M.16.4]
gi|259645311|sp|C3MZR1.1|DNLI_SULIA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|259645312|sp|C4KIZ2.1|DNLI_SULIK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|259645313|sp|C3MJ14.1|DNLI_SULIL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|259645314|sp|C3MYD2.1|DNLI_SULIM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|227457414|gb|ACP36101.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus L.S.2.15]
gi|227460003|gb|ACP38689.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus M.14.25]
gi|228020486|gb|ACP55893.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus M.16.27]
gi|238381468|gb|ACR42556.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus M.16.4]
Length = 601
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 136/504 (26%), Positives = 238/504 (47%), Gaps = 63/504 (12%)
Query: 124 LTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
L + E+ L ++A + +R KI +L+ L+KK + E K+++ + L++GI + +
Sbjct: 119 LKVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDAT 178
Query: 181 IFHEF----------HPDAEDLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQLA 229
+ E +N+ DL + + + ++ + K EVG +RP LA
Sbjct: 179 VLDAMAIAFGGGQSASEIVERAYNLRADLGNIAKIIVEKGIEALKTLKPEVGIPIRPMLA 238
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE 289
R+ + +K+ G +V + K+DG+R QIHK +I FSR + + + + I
Sbjct: 239 ERLSNPEEILKKVGGSALV-DYKYDGERAQIHKKDDKIFIFSRRLENITSQYPDVVEYIS 297
Query: 290 QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG----LSSDRQLCYFAFDVLY 345
+ I++GE++ D F QE+ R + + F FD++Y
Sbjct: 298 KYTEGKEFIIEGEIVAVDPESGEMRSF---QELMHRKRKSDIYEAIKEYPVNVFLFDLMY 354
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
D + L+ R +LL+ +VKP N +V+ + +NV+++
Sbjct: 355 YEDVDYTTKPLEVRRKLLESIVKP--------------NDYVKI----AHHIQVNNVEDL 396
Query: 406 EKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYG 462
+ FF I EG+++K +G + ++ G R W+KLK +Y +D +D++++GG+YG
Sbjct: 397 KSFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYG 456
Query: 463 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
G+RGG+++ L+A A P DT F S C+V +G SDE+LD + KL R ++P
Sbjct: 457 KGKRGGKISSLLMA-AYNPKTDT----FESVCKVASGFSDEQLDELQKKLMEIKRDIKHP 511
Query: 523 KRAPPSFYQVTNNSKERPDVWIESPEKSIILS---ITSDIRTIRSEVFS--APYSLRFPR 577
+ NSK PD+W+E + I+ S + T +V A S+RFPR
Sbjct: 512 R----------VNSKMEPDIWVEPVYVAEIIGAEITISPLHTCCQDVVEKDAGLSIRFPR 561
Query: 578 IDRVRYDKPWHDCLDVQSFVELVH 601
R R DK D +E+ +
Sbjct: 562 FIRWRDDKSPEDATTTDEILEMYN 585
>gi|165969038|ref|YP_001650938.1| DNA ligase [Orgyia leucostigma NPV]
gi|164663534|gb|ABY65754.1| DNA ligase [Orgyia leucostigma NPV]
Length = 608
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 147/628 (23%), Positives = 269/628 (42%), Gaps = 92/628 (14%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDY-FSALRLILPSLDRERGSYGLKESVL 70
V+L I A+K R L+ Y S F +++LP + S+ + L
Sbjct: 9 FVNLCASITAATKLAEKTEIIRNHLNVYAPSATLKFLYCQMLLP---KTMKSFNINNKTL 65
Query: 71 ANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELN 130
N G+ D + V I N+G+ +V A+V I+ +++ ++
Sbjct: 66 INAFARTYGVPSD--NIVEDIK--------NSGDMALVLAKVCGMADDEITQSISLNDVF 115
Query: 131 DLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAE 190
LL + + +KI +L+ + K A +++ I+ +I + L G + K + HP A
Sbjct: 116 TLLMAIVMIKKNEDKIVLLTNFLTKCVASDVEIIVRLINRKLTTGANVKQVMDALHPLAL 175
Query: 191 DLFNVT-C---------DLKLVCEKLKDRNQRHKRQDIEVGKA------------VRPQL 228
+ + T C D +CE + N ++E G + V P L
Sbjct: 176 NTYKTTSCMITVFRRHIDAAFLCEP-SENNCDDNADNVEAGPSQPRSAEISVFLPVEPML 234
Query: 229 AMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSR---------SFLDHSE 279
A A +K +++E K+DG+R+Q+H +E ++SR SF +S
Sbjct: 235 AEACKTVAMALKKCPDG-MLVETKYDGERVQVHYTNNEAKFYSRTLKPLASHKSFCMYSY 293
Query: 280 YGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGS-NQEIAKAARDGLSSDRQLCY 338
A + E ILD E+++ D + FG+ + + +G+ +C
Sbjct: 294 LLEAFGPVTEN------AILDAEIVLVDDDTDAVLPFGTLGVNMKRKHPNGI-----MCL 342
Query: 339 FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLV 398
+ FD L + + +IH L ER + LQ + P + R+ L H + +H
Sbjct: 343 YVFDCLLLDNEPLIHLPLAERKKKLQSRLTPVRNRV-MLAETHNVTTH------------ 389
Query: 399 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVL 455
+++ + + EG+++K L K+EPG R +WLK+K +Y+ G +D++
Sbjct: 390 ----EQLVCLLNDAVNRHLEGLMVKPLLGKYEPGKR--RWLKIKKDYLCNGEMADSIDLV 443
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
++G G+G++GG+++ FL+ DT+ ++ +V +G +D + + + KLKP
Sbjct: 444 VLGAQMGTGKKGGQLSIFLMG-CRNEEDDTW----VAITKVHSGFTDSDFNVLQNKLKPL 498
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 575
+ E PP++ + N + PD P++ + I T + S+RF
Sbjct: 499 MVRIE----TPPAWLKC--NKRILPDYVAVDPKRMPVWQIIGSQLTKSNSHTPDGVSVRF 552
Query: 576 PRIDRVRYDKPWHDCLDVQSFVELVHSS 603
PR+ VR DK W +Q L +S
Sbjct: 553 PRVSSVREDKNWRTASTLQQIRVLYETS 580
>gi|334324598|ref|XP_001373823.2| PREDICTED: DNA ligase 3 [Monodelphis domestica]
Length = 1217
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 231/496 (46%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E++ L +L+ ++ +VL + + A ++K II +I DLK+ K +
Sbjct: 374 LTIQEVDAFLLQLSKLTKEDDQQNVLQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 433
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKR---------QDIEVGKAVRPQLAMRIGD 234
P+A + F + +L+ V E++ Q ++ + V+P LA
Sbjct: 434 ALDPNAYEAFKASRNLQDVVERVLANQQESEKVPGMKRTLNVQASLMTPVQPMLAEACKS 493
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG + YFSRS L H + H I +
Sbjct: 494 IDYAMKKCPNG-MFSEIKYDGERVQVHKNGDQFSYFSRSLKPVLPH-KVAHFKDYIPQAF 551
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ DT + FG+ KAA D +C F FD +Y D S+
Sbjct: 552 PGGHSMILDAEVLLIDTKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 607
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ L S ++ + +H + + + +E
Sbjct: 608 MDRPLCERRKFLHDNM--------VQIPNRILFSEMKHVTK-----ASHLANMINRVIRE 654
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 655 GL----EGLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGNKGG 708
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L + +L + + P + PS
Sbjct: 709 MMSIFLMGCY-----DPSSKKWCTVTKCSGGHDDATLARLQNELD-MVKISKDPSKI-PS 761
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPW 587
+ ++ N PD + P+K+ + IT ++E +A S+RFPR R+R DK W
Sbjct: 762 WLKINKNY--YPDFIVPDPKKAPVWEITG-AEFSKAEAHTADGISIRFPRCTRIRDDKDW 818
Query: 588 HDCLDVQSFVELVHSS 603
++ EL H S
Sbjct: 819 KSATNLPQLKELYHLS 834
>gi|393795129|ref|ZP_10378493.1| ATP-dependent DNA ligase I [Candidatus Nitrosoarchaeum limnia BG20]
Length = 590
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 155/558 (27%), Positives = 263/558 (47%), Gaps = 76/558 (13%)
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLIN--WRKGGAAPNAGNFPMVAAEVLQRRQ--GM 119
G++ V I A+ S S +A + I +RK G +A A+++L++++
Sbjct: 55 GVELGVAEKLAIRAIAKSAGSDNAEKKIEDEYRKSGDLGHA------ASKILEQKEQTTF 108
Query: 120 ISGGLTIKELNDLLDRLASSE-NRAE--KISVLSTLIKKTNAQEMKWIIMIILKDLKLGI 176
+ +T++ + + L +A E N+ + K+ +S L+ N +E K+I+ I+L L+LGI
Sbjct: 109 MVQDITVERVYENLVTIAKLEGNKTQDRKMKYISGLLNDANPEESKFILKILLGTLRLGI 168
Query: 177 SEKSIF----------HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ-DIEVGKAVR 225
+E ++ E E +NV+ DL V E + + + + +I + +R
Sbjct: 169 AENTVMDALAIAFTGNKENRKALEHAYNVSSDLGKVAETIAIKGLKGIEEFEINLFNPIR 228
Query: 226 PQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMS 285
P LA R+ A KL G + E K DG+R+Q+H G ++ FSRS + + Y +
Sbjct: 229 PMLADRVKSEEEAIEKL-GAQFAAEYKLDGERVQLHIEGDKVVLFSRSLENITSYYPDIV 287
Query: 286 KIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCY----FAF 341
+ I + + ++ IL+ E + + + F F QE+ R L Y F
Sbjct: 288 EKIPKAIQANKVILEAEAVAINENSGEFLPF---QELMHRRRKYQIEKAVLQYPITVNFF 344
Query: 342 DVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHN 401
DVLY S + KER ELL+K+VK + HV P + +N
Sbjct: 345 DVLYYDGKSCLEFPYKERRELLEKIVKEDE-----------YAKHV-----PMT--IINN 386
Query: 402 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEY-IRAGSDLDVLIIGGY 460
+++E+F + +I + EG++LK L ++ G R WLKLK EY G LD+++IG +
Sbjct: 387 QEDIEEFLENSINSGCEGVMLKMLDKPYQAGSRGSYWLKLKREYRNELGDSLDLVVIGAF 446
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
+G GRR G+ L+A + D F S C+VGTG +D++LD + L +
Sbjct: 447 FGKGRRTGKYGTLLLA-----SYDYDRDMFTSICKVGTGFTDDDLDQLYQILSDKVTIKK 501
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI------RTIRSEVFS-APYSL 573
P+ +S+ DVW E PE +I + S+I + R+E+ +L
Sbjct: 502 NPRI----------DSEMEADVWFE-PE-LVIEIVASEITLSPIHKAARNEIRKDTGLAL 549
Query: 574 RFPRID-RVRYDKPWHDC 590
RFP+ ++R +K D
Sbjct: 550 RFPKFTGKIRLEKDPEDA 567
>gi|229579844|ref|YP_002838243.1| ATP-dependent DNA ligase [Sulfolobus islandicus Y.G.57.14]
gi|259645316|sp|C3N834.1|DNLI_SULIY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|228010559|gb|ACP46321.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus Y.G.57.14]
Length = 601
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 135/504 (26%), Positives = 238/504 (47%), Gaps = 63/504 (12%)
Query: 124 LTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
L + E+ L ++A + +R KI +L+ L+KK + E K+++ + L++GI + +
Sbjct: 119 LKVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDAT 178
Query: 181 IFHEF----------HPDAEDLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQLA 229
+ E +N+ DL + + + ++ + K EVG +RP LA
Sbjct: 179 VLDAMAIAFGGGQSASEIVERAYNLRADLGNIAKIIVEKGIEALKTLKPEVGIPIRPMLA 238
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE 289
R+ + +K+ G +V + K+DG+R QIHK +I FSR + + + + I
Sbjct: 239 ERLSNPEEILKKVGGSALV-DYKYDGERAQIHKKDDKIFIFSRRLENITSQYPDVVEYIS 297
Query: 290 QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG----LSSDRQLCYFAFDVLY 345
+ I++GE++ D F QE+ R + + F FD++Y
Sbjct: 298 KYTEGKEFIIEGEIVAVDPESGEMRSF---QELMHRKRKSDIYEAIKEYPVNVFLFDLMY 354
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
D + L+ R +LL+ +VKP N +V+ + +N++++
Sbjct: 355 YEDVDYTTKPLEVRRKLLESIVKP--------------NDYVKI----AHHIQVNNIEDL 396
Query: 406 EKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYG 462
+ FF I EG+++K +G + ++ G R W+KLK +Y +D +D++++GG+YG
Sbjct: 397 KSFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYG 456
Query: 463 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
G+RGG+++ L+A A P DT F S C+V +G SDE+LD + KL R ++P
Sbjct: 457 KGKRGGKISSLLMA-AYNPKTDT----FESVCKVASGFSDEQLDELQKKLMEIKRDIKHP 511
Query: 523 KRAPPSFYQVTNNSKERPDVWIESPEKSIILS---ITSDIRTIRSEVFS--APYSLRFPR 577
+ NSK PD+W+E + I+ S + T +V A S+RFPR
Sbjct: 512 R----------VNSKMEPDIWVEPVYVAEIIGAEITISPLHTCCQDVVEKDAGLSIRFPR 561
Query: 578 IDRVRYDKPWHDCLDVQSFVELVH 601
R R DK D +E+ +
Sbjct: 562 FIRWRDDKSPEDATTTDEILEMYN 585
>gi|383847368|ref|XP_003699326.1| PREDICTED: DNA ligase 3 [Megachile rotundata]
Length = 979
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 228/499 (45%), Gaps = 52/499 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LT++E++ L+RL+ ++I+ ++I + ++K II +I DL++ K +
Sbjct: 342 LTMQEVDQFLERLSFLTREEDQINHFKSIISRCTTNDLKMIIRLIKHDLRINAGPKHVLS 401
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHK------------RQDIEVGKAVRPQLAMR 231
H A + F V+ DL V E+ K + + + V P LA
Sbjct: 402 AIHEQAYEAFQVSRDLDSVVERFSQAPSGSKLGKVSSGSSGGGKVALSLMTPVLPMLAEA 461
Query: 232 IGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKII 288
A +K ++ E K+DG+R+Q+HK G+E YFSRS L H + H I
Sbjct: 462 CKSVEMAMKKCSSG-MLSEVKYDGERVQVHKRGNEFRYFSRSLKPVLPH-KVNHFKDYIP 519
Query: 289 EQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGD 348
+ D ILD E+L+ DT+ + FG+ KA D +C F FD +Y
Sbjct: 520 KAFPDGDDLILDAEVLMIDTNTGQPLPFGTLGIHKKAE----FKDANVCLFVFDCIYYNG 575
Query: 349 TSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKF 408
++H+S+ ER ++L++ + T +P+ + S V+ P ++ K
Sbjct: 576 DVLLHKSMMERRKILEERM--------TEIPNRIMLSEVQEVRRP---------QDLAKM 618
Query: 409 FKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGR 465
+ + EG+VLKD+ K+EPG R WLK+K +Y+ G+ D++++G +YG+G
Sbjct: 619 IAKVLSMGLEGLVLKDVTGKYEPGKRH--WLKVKKDYLFDGAMADTADLVVLGAWYGTGN 676
Query: 466 RGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA 525
RGG ++ FL+ D +++ +V TG D L + +L + + P +
Sbjct: 677 RGGMMSIFLMGCY-----DEDQGNWVTVTKVHTGHDDATLTMLQDELD-MIKIAKDPNKV 730
Query: 526 PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
P + N PD P+K + IT T + + S+RFPR+ ++R DK
Sbjct: 731 P---KWLRANKPMIPDFVARDPKKQPVWEITGAEFTNQGVHTADGISIRFPRVTKIRRDK 787
Query: 586 PWHDCLDVQSFVELVHSSN 604
W + L +S+
Sbjct: 788 DWSSATTLNELRRLFKTSS 806
>gi|238882098|gb|EEQ45736.1| hypothetical protein CAWG_04070 [Candida albicans WO-1]
Length = 928
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 153/625 (24%), Positives = 278/625 (44%), Gaps = 87/625 (13%)
Query: 27 KKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
KK + F++T+ + D + + +LI P ++ Y +KE LA LI + K+S
Sbjct: 48 KKAFIIKTFINTFRTHIGNDIYPSAKLIFP--EKSGRIYFIKEVALARLLIKMYKIPKES 105
Query: 85 ADAVRLINWRKGGA--------APNAGNFPMVAAEVLQRRQGMISG--GLTIKELNDLLD 134
D + L +W K + P+ A+ ++ +R+ ++ T+ ++N LD
Sbjct: 106 EDYITLHDWNKSYQRSRRFSIDEKKIRDLPLQASRIISKRRPIVDKLEEYTVPQINSSLD 165
Query: 135 RLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFN 194
+LA + +I +L L + E++W+I I+L L E+ F+ +HPD +F+
Sbjct: 166 QLALEKVSQGQIDILKPLFDNLSIPEVRWLIHILLNKSILTSMERFFFNTWHPDGYRVFS 225
Query: 195 VTCDLKLVCEKLKDRNQRHKRQDIEVGKA--VRPQLAMRIGDAHAAW-RKLHGK------ 245
+ DL+ + + + R + + +PQL+ R+ ++ +KL K
Sbjct: 226 ICNDLQKTLQFSTNPDLRLDPSQLAIHPCFKFKPQLSERLTTSYKTLVKKLQRKHEMDPP 285
Query: 246 ------------EVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKI 287
+ IE K DGDR+ +HK+G +FSR D+S YG A++K
Sbjct: 286 YEKKFQELGLENKFYIEEKMDGDRMLLHKDGDSFKFFSRRLKDYSYLYGESFQFGALTKF 345
Query: 288 IEQNVL--VDRCILDGEMLVWDTSLNRFAEFGS--NQEIAKAARDGLSSD---RQLCY-- 338
+ V ILDGEM+ +D N FG+ + I ++ R + D +Q Y
Sbjct: 346 LAHAFAGNVQSVILDGEMVAYDYERNVILPFGTLKSSAIQESVRQFTTIDQYEQQTAYPF 405
Query: 339 -FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSL 397
FD+L++ + + L R +L ++++P R E L G +S
Sbjct: 406 FLVFDILFLNGKDLTNYPLFFRKNILNRILRPIPNRFEVLDTRLGSSS------------ 453
Query: 398 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWE-PGDRSGKWLKLKPEYI-RAGSDLDVL 455
+++E+ +E + +R EG+VLK++ SK+E G R+ W+K+KPEY+ + G +LD++
Sbjct: 454 -----EDIERAIREVVSSRCEGLVLKNVQSKYEIDGFRNPDWIKVKPEYLEKFGENLDLV 508
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
+I G+ ++ L Y SFC G+ EE D +
Sbjct: 509 VI------GKSPAIKNSYMCGLKSVTDGVYY-----SFCTCANGIEIEEFDKIERLTHGK 557
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEV-FSAPYSLR 574
+ K + PP + + P WI P S++L I + IR+ ++ +L
Sbjct: 558 WIKTDV--SMPPE--SLIKFGTKIPTFWIH-PSDSLVLEIRARSIDIRAGTSYAVGSTLH 612
Query: 575 FPRIDRVRYDKPWHDCLDVQSFVEL 599
++R DK +C+ +Q + +
Sbjct: 613 NNHCRKIREDKSIDECVTLQEYTHI 637
>gi|46116624|ref|XP_384330.1| hypothetical protein FG04154.1 [Gibberella zeae PH-1]
Length = 438
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 175/338 (51%), Gaps = 39/338 (11%)
Query: 16 FNWIQKTKPAAKKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANC 73
F + K P ++R +F+ + V D++ ALRLILP DR+RG YGLKE+ +
Sbjct: 70 FRGVNKLSPHEQRRHIIDRFITRWRKEVGPDFYPALRLILPDKDRDRGVYGLKENAIGKL 129
Query: 74 LIDALGMSKDSADAVRLINWRKGG---AAPNAGNFPMVAAEVLQRRQGMIS-GGLTIKEL 129
L+ + + K+S D L++W+ G A+ AG+F EV+ +R G +TI E+
Sbjct: 130 LVKLMKIDKNSEDGYSLLHWKLPGQTMASRLAGDFAGRCFEVISKRPMRTQVGNMTIAEV 189
Query: 130 NDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDA 189
N+ LD+LASS E + V + N++E+ W+I I+LK +K+G +EK+ +HPD
Sbjct: 190 NEQLDKLASSSGEMENLRVFEIFYHRMNSEELMWLIRIVLKQMKVGATEKTFLDLWHPDG 249
Query: 190 EDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVG--KAVRPQLAMRIGDAHAAWRKL----- 242
+ LF+V+ LK VC +L + R ++ + V + +PQLA A+++K+
Sbjct: 250 DALFSVSSSLKRVCWELWNPEIRLEQDETGVALMQCFQPQLAQ--FQMPASFQKMIQLLR 307
Query: 243 ---HGKEVVIECKFDGDRIQI-------HKNGSEIHYFSRSFLDHSE-YGHAMSKIIEQN 291
E IE K DG+R+Q+ H G + ++SR D++ YG + E +
Sbjct: 308 PTEEDPEFWIEEKLDGERMQVHMVQDKSHPGGRKFCFWSRKAKDYTYLYGDGLQD--ETS 365
Query: 292 VL-----------VDRCILDGEMLVWDTSLNRFAEFGS 318
L V ILDGEM+ WD +++ FG+
Sbjct: 366 SLTRHLKDAFASGVKNLILDGEMITWDMGVDKIVPFGT 403
>gi|229581496|ref|YP_002839895.1| ATP-dependent DNA ligase [Sulfolobus islandicus Y.N.15.51]
gi|259645315|sp|C3NF77.1|DNLI_SULIN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|228012212|gb|ACP47973.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus Y.N.15.51]
Length = 601
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 229/484 (47%), Gaps = 60/484 (12%)
Query: 141 NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEF----------HPDAE 190
+R KI +L+ L+KK + E K+++ + L++GI + ++ E
Sbjct: 139 SRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDATVLDAMAIAFGGGQSASEIVE 198
Query: 191 DLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVI 249
+N+ DL + + + ++ + K EVG +RP LA R+ + +K+ G +V
Sbjct: 199 RAYNLRADLGNIAKIIVEKGIEALKTLKPEVGIPIRPMLAERLSNPEEILKKVGGSALV- 257
Query: 250 ECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTS 309
+ K+DG+R QIHK +I FSR + + + + I + I++GE++ D
Sbjct: 258 DYKYDGERAQIHKKDDKIFIFSRRLENITSQYPDVVEYISKYTEGKEFIIEGEIVAVDPE 317
Query: 310 LNRFAEFGSNQEIAKAARDG----LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQK 365
F QE+ R + + F FD++Y D + L+ R +LL+
Sbjct: 318 SGEIRSF---QELMHRKRKSDIYEAIKEYPVNVFLFDLMYYEDVDYTTKPLEVRRKLLES 374
Query: 366 VVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL 425
+VKP N +V+ + +NV++++ FF I EG+++K +
Sbjct: 375 IVKP--------------NDYVKI----AHHIQVNNVEDLKSFFYRAISEGGEGVMVKAI 416
Query: 426 G--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPA 482
G + ++ G R W+KLK +Y +D +D++++GG+YG G+RGG+++ L+A A P
Sbjct: 417 GKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGKRGGKISSLLMA-AYNPK 475
Query: 483 PDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDV 542
DT F S C+V +G SDE+LD + KL R ++P+ NSK PD+
Sbjct: 476 TDT----FESVCKVASGFSDEQLDELQKKLMEIKRDIKHPR----------VNSKMEPDI 521
Query: 543 WIESPEKSIILS---ITSDIRTIRSEVFS--APYSLRFPRIDRVRYDKPWHDCLDVQSFV 597
W+E + I+ S + T +V A S+RFPR R R DK D +
Sbjct: 522 WVEPVYVAEIIGAEITISPLHTCCQDVVEKDAGLSIRFPRFIRWRDDKSPEDATTTDEIL 581
Query: 598 ELVH 601
E+ +
Sbjct: 582 EMYN 585
>gi|344232319|gb|EGV64198.1| ATP-dependent DNA ligase [Candida tenuis ATCC 10573]
Length = 715
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 142/528 (26%), Positives = 248/528 (46%), Gaps = 87/528 (16%)
Query: 131 DLLDRLASS---ENRAEKISVLSTLIK--KTNAQEMKWIIMIILKDLKLGISEKSIF--- 182
D L ++A S +++ +K+ +++ L+ + E K++I + L++G++EK++
Sbjct: 224 DSLTKIAKSTGKDSQMKKVGLINKLLTACERKTTEAKFLIRSLEGKLRIGLAEKTVLIGL 283
Query: 183 ---------HEFHPD----AEDL----FNVTCDLKLVCEKLKDRNQRHKRQDIEV--GKA 223
H P+ AED+ F++ + +++ + + + I + G
Sbjct: 284 AQAFTNYENHAMTPENITKAEDIIRESFSLIPNYEIIIKTAYEHGIFNLLDHIHLTPGIP 343
Query: 224 VRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHSEYG 281
++P LA + G+E E K+DG+R Q+H +GS + +SR+ D S+
Sbjct: 344 LKPMLAKPTKSISEVLDRFQGEEFTCEYKYDGERAQVHLLSDGS-VRIYSRNSEDMSQRY 402
Query: 282 HAMSKIIEQNVLVDR---------CILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSS 332
+ II+ + V ILD E + WD LN+ F Q ++ R ++
Sbjct: 403 PDLIAIIKDFIKVQEDSDGTPIKSLILDCEAVAWDRQLNKILPF---QVLSTRKRKDVNE 459
Query: 333 DR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
+C FAFD+LY+ SV++++L ER EL+ + +KP +G+
Sbjct: 460 KDIKVHICLFAFDILYLNGESVVNKTLAERRELMYENLKPIEGKF--------------- 504
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK---WEPGDRSGKWLKLKPE 444
C+ S + N+DE++ F +++++ EG+++K L SK +EP RS WLKLK +
Sbjct: 505 ----CFATSRNSSNLDELQIFLDQSVKDSCEGLMVKMLNSKESYYEPSKRSRNWLKLKKD 560
Query: 445 YIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDE 503
Y+ G LD++++G Y G G+R G FL+A DT F + C++GTG SDE
Sbjct: 561 YLAGVGDSLDLVVVGAYNGRGKRTGNYGGFLLASYND---DT--GEFETTCKIGTGFSDE 615
Query: 504 ELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIR 560
+L ++ L P + PK + + PDVW E +L+ S I
Sbjct: 616 DLTSLYNSLHP--TEISQPKGS------YVYDPSAVPDVWFEPTTLFEVLTADLSLSPIY 667
Query: 561 TIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 608
+ F+ SLRFPR R+R DK D + +E +S + Q
Sbjct: 668 KAGHQEFTKGISLRFPRFLRIREDKGVEDATTSEQVIEF-YSKQASVQ 714
>gi|426238631|ref|XP_004013253.1| PREDICTED: DNA ligase 3 [Ovis aries]
Length = 885
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 150/550 (27%), Positives = 251/550 (45%), Gaps = 60/550 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 374 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 433
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRH------KRQDIEVGKA----VRPQLAMRIG 233
P+A + F + +L+ V E++ RN++ +R+ + V + V+P LA
Sbjct: 434 ALDPNAYEAFKASRNLQDVVERVL-RNEQEVEKEPGQRRALSVQASLMTPVQPMLAEACK 492
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HK G YFSRS L H + H I
Sbjct: 493 SIEYAMKKCPNG-MFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPH-KVAHFKDFIPRA 550
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ D R FG+ KAA D +C F FD +Y D S
Sbjct: 551 FPGGHSMILDSEVLLIDNRTGRPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVS 606
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L ER +LL + +P+ + S ++ + + VD + + +
Sbjct: 607 LMDRPLCERRKLLYDNM--------VEIPNRIMFSEMKQ-----VTKASDLVDMINRVIR 653
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRG 467
E + EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +G
Sbjct: 654 EGL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 707
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G ++ FL+ D +++ + + G D L + T+L + + P + P
Sbjct: 708 GMMSIFLMGCF-----DPSSQKWCTVTKCAGGHDDATLARLQTELD-MVKISKDPSKI-P 760
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKP 586
++ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R DK
Sbjct: 761 NWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKD 817
Query: 587 WHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
W ++ EL S K G L D KP R K +K + P +
Sbjct: 818 WKSATNLPQLKELYQLS-----KESRGGNLPDAKPSPVRVGVK--RKAPDVTPCQAKRRP 870
Query: 647 VSDIKGETSI 656
S +G ++
Sbjct: 871 ASKQRGRRAV 880
>gi|7594511|emb|CAA64457.2| ATP-dependent DNA ligase [Candida albicans]
Length = 928
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 152/625 (24%), Positives = 279/625 (44%), Gaps = 87/625 (13%)
Query: 27 KKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
KK + F++T+ + D + + +LI P ++ Y +KE LA LI + K+S
Sbjct: 48 KKAFIIKTFINTFRTHIGNDIYPSAKLIFP--EKSGRIYFIKEVALARLLIKMYKIPKES 105
Query: 85 ADAVRLINWRKGGA--------APNAGNFPMVAAEVLQRRQGMISG--GLTIKELNDLLD 134
D + L +W K + P+ A+ ++ +R+ ++ T+ ++N LD
Sbjct: 106 EDYITLHDWNKSYQRSRRFSIDEKKIRDLPLQASRIISKRRPIVDKLEEYTVPQINSSLD 165
Query: 135 RLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFN 194
+LA + +I +L L + E++W+I I+L L E+ F+ +HPD +F+
Sbjct: 166 QLALEKVSQGQIDILKPLFDNLSIPEVRWLIHILLNKSILTSMERFFFNTWHPDGYRVFS 225
Query: 195 VTCDLKLVCEKLKDRNQRHKRQDIEVGKA--VRPQLAMRIGDAHAAW-RKLHGK------ 245
+ DL+ + + + R + + +PQL+ R+ ++ +KL K
Sbjct: 226 ICNDLQKTLQFSTNPDLRLDPSQLAIHPCFKFKPQLSERLTTSYKTLVKKLQRKHEMDPP 285
Query: 246 ------------EVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKI 287
+ IE K DGDR+ +HK+G +FSR D+S YG A++K
Sbjct: 286 YEKKFQELGLENKFYIEEKMDGDRMLLHKDGDSFKFFSRRLKDYSYLYGESFQFGALTKF 345
Query: 288 IEQNVL--VDRCILDGEMLVWDTSLNRFAEFGS--NQEIAKAARDGLSSD---RQLCY-- 338
+ + ILDGEM+ +D N FG+ + I ++ R + D +Q Y
Sbjct: 346 LAHAFAGNIQSVILDGEMVAYDYERNVILPFGTLKSSAIQESVRQFTTIDQYEQQTAYPF 405
Query: 339 -FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSL 397
FD+L++ + + L R +L ++++P R E L G +S
Sbjct: 406 FLVFDILFLNGKDLTNYPLFFRKNILNRILRPIPNRFEVLDTRLGSSS------------ 453
Query: 398 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWE-PGDRSGKWLKLKPEYI-RAGSDLDVL 455
+++E+ +E + +R EG+VLK++ SK+E G R+ W+K+KPEY+ + G +LD++
Sbjct: 454 -----EDIERAIREVVSSRCEGLVLKNVQSKYEIDGFRNPDWIKVKPEYLEKFGENLDLV 508
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
+I G+ ++ L + D + I FC G+ EE D +
Sbjct: 509 VI------GKSPAIKNSYMCGL--KSVTDGF---IIVFCTCANGIEIEEFDKIERLTHGK 557
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS-DIRTIRSEVFSAPYSLR 574
+ K + PP + + P WI P S++L I + I T ++ +L
Sbjct: 558 WIKTDV--SMPPE--SLIKFGTKIPTFWIH-PSDSLVLEIRARSIDTRAGTSYAVGSTLH 612
Query: 575 FPRIDRVRYDKPWHDCLDVQSFVEL 599
++R DK +C+ +Q + +
Sbjct: 613 NNHCRKIREDKSIDECVTLQEYTHI 637
>gi|385773884|ref|YP_005646451.1| ATP-dependent DNA ligase I [Sulfolobus islandicus HVE10/4]
gi|385776526|ref|YP_005649094.1| ATP-dependent DNA ligase I [Sulfolobus islandicus REY15A]
gi|323475274|gb|ADX85880.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus REY15A]
gi|323477999|gb|ADX83237.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus HVE10/4]
Length = 601
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 136/504 (26%), Positives = 237/504 (47%), Gaps = 63/504 (12%)
Query: 124 LTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
L + E+ L ++A + +R KI +L+ L+KK + E K+++ + L++GI + +
Sbjct: 119 LKVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDAT 178
Query: 181 IFHEF----------HPDAEDLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQLA 229
+ E +N+ DL + + + ++ + K EVG +RP LA
Sbjct: 179 VLDAMAIAFGGGQSASEIVERAYNLRADLGNIAKIIVEKGIEALKTLKPEVGIPIRPMLA 238
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE 289
R+ + +K+ G +V + K+DG+R QIHK +I FSR + + + + I
Sbjct: 239 ERLSNPEEILKKVGGSALV-DYKYDGERAQIHKKDDKIFIFSRRLENITSQYPDVVEYIS 297
Query: 290 QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG----LSSDRQLCYFAFDVLY 345
+ I++GE++ D F QE+ R + + F FD++Y
Sbjct: 298 KYTEGKEFIIEGEIVAVDPESGEMRSF---QELMHRKRKSDIYEAIKEYPVNVFLFDLMY 354
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
D + L+ R +LL+ +VKP N +V+ + +NV+++
Sbjct: 355 YEDVDYTTKPLEVRRKLLESIVKP--------------NDYVKI----AHHIQVNNVEDL 396
Query: 406 EKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYG 462
+ FF I EG+++K +G + ++ G R W+KLK +Y +D +D++++GG+YG
Sbjct: 397 KSFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYG 456
Query: 463 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
G+RGG+++ L+A A P DT F S C+V +G SDE+LD + KL R ++P
Sbjct: 457 KGKRGGKISSLLMA-AYNPKTDT----FESVCKVASGFSDEQLDELQKKLMEIKRDIKHP 511
Query: 523 KRAPPSFYQVTNNSKERPDVWIESPEKSIILS---ITSDIRTIRSEVFS--APYSLRFPR 577
+ NSK PD+W+E + I+ S + T V A S+RFPR
Sbjct: 512 R----------VNSKMEPDIWVEPVYVAEIIGAEITISPLHTCCQGVVEKDAGLSIRFPR 561
Query: 578 IDRVRYDKPWHDCLDVQSFVELVH 601
R R DK D +E+ +
Sbjct: 562 FIRWRDDKSPEDATTTDEILEMYN 585
>gi|326498483|dbj|BAJ98669.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 937
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/524 (26%), Positives = 240/524 (45%), Gaps = 52/524 (9%)
Query: 96 GGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKK 155
G A F A V + ++S +++ L L ++I +L + +K
Sbjct: 280 GDVAETIAEFYSTTAHVKPPPKTILSN----YDVDHYLHELGKVTREQDQIQLLRKITEK 335
Query: 156 TNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEK-------LKD 208
+ +++ I ++ KDLK+ K I +A + F T DLK ++ +++
Sbjct: 336 STVNDLRMFIRLVQKDLKINAGPKHIIESLGSNAYESFQATNDLKSFIKRYLEHKTSVQN 395
Query: 209 RNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGS- 265
Q K+ IE+ V P LA A+++ K E K+DG+R+Q+HK+ +
Sbjct: 396 GTQLSKKLSIRIELMTPVHPMLAEPCKSVDFAFKRC-PKGFYAEIKYDGERLQLHKDKTN 454
Query: 266 EIHYFSRSFLDHSEYG-HAMSKIIEQNVLV-DRCILDGEMLVWDTSLNRFAEFGSNQEIA 323
+ +FSRS +E+ H +S+ + Q + ILDGE+L+ D + FG+
Sbjct: 455 QFKFFSRSLKPVTEHKIHQLSQYVVQAFPKGESMILDGEILLVDRKTKKPLPFGT----L 510
Query: 324 KAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGL 383
+ S+ +F FD LY S++H++LKER E+L + P + R+ L +
Sbjct: 511 GVHKKKEFSEANEAFFIFDCLYYNGESLLHKTLKERREILVHHMTPIENRI-VLSDLKTI 569
Query: 384 NSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKP 443
N ++++ TI EG+VLK+ +EP R WLK+K
Sbjct: 570 NKK----------------NDLKHLINFTIAEGLEGLVLKNPDGAYEPNKRH--WLKVKK 611
Query: 444 EYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 500
+Y+ G+ D++++G YYG+G++GG ++ FL+ + P D R+ + + G G
Sbjct: 612 DYLMEGTMADTADLVVLGAYYGTGKKGGLMSVFLLGCHD-PESD----RWYTVAKCGNGF 666
Query: 501 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKER-PDVWIESPEKSIILSITSDI 559
D L+ + KP K + P + N S+E PD + P+KS + IT
Sbjct: 667 DDATLEKLQDDFKPNMTKIS---KNPNQVPKWCNISRELVPDFIVIDPKKSPVWEITGAE 723
Query: 560 RTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSS 603
+ + + S+RFPR+ +VR DK W + ++Q EL S
Sbjct: 724 FSKSKQHTANGISIRFPRVTKVREDKTWKEATNLQYLTELFEKS 767
>gi|345489172|ref|XP_001601405.2| PREDICTED: DNA ligase 3 [Nasonia vitripennis]
Length = 1031
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 141/508 (27%), Positives = 239/508 (47%), Gaps = 67/508 (13%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LT++E+++ L++L+ E++ +++K+ A ++K II +I DL++ K I
Sbjct: 277 LTLQEVDEFLEQLSKLTKEDEQMDHFKSILKRCTADDLKMIIRLIKHDLRINAGPKHILG 336
Query: 184 EFHPDAEDLFNVTCDLKLVCEK-----------------LKDRNQRHKRQDIEVGKAVRP 226
H DA F V+ DL + + L + K + + V P
Sbjct: 337 AVHDDAYMAFQVSRDLPAIIRRCLGISPTASTSSAATSPLAKSPKAGKVATLSLMTPVLP 396
Query: 227 QLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDH-----S 278
LA A +K ++ E K+DG+R+Q+HK GS+ Y+SRS L H
Sbjct: 397 MLAEACKSVEMAMQKCPNG-MLSEVKYDGERLQVHKMGSDFRYYSRSLKPVLPHKVNFLK 455
Query: 279 EYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCY 338
EY + K Q D ILD E+L+ DT + FGS KA D +C
Sbjct: 456 EY---IPKAFPQG---DDLILDAEILLIDTRNGQPLPFGSLGVHKKAE----FKDANVCL 505
Query: 339 FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLV 398
F FD++Y ++ +++++R +LL++ + P +P+ + S ++ +P L
Sbjct: 506 FVFDIIYYNGEPLMDRTMQQRRKLLEEKMTP--------IPNRIMLSEIQVIKDP-KKLA 556
Query: 399 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVL 455
A + K FK R EG+VLKD+ SK+EPG R WLK+K +Y+ G+ + D++
Sbjct: 557 AM----IAKVFK----LRLEGLVLKDVDSKYEPGKRH--WLKIKKDYLLQGAMADNADLV 606
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
++G +YG+G++GG ++ FL+ + P D + ++ +V TG D L + T L
Sbjct: 607 VLGAWYGTGQKGGMMSVFLMGCYD-PDSDIW----VTVTKVHTGHDDATLAKLQTSLD-M 660
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 575
+ + P P + N PD + P+K + IT T + + S+RF
Sbjct: 661 IKIGKDPGLIP---RWLRANKPMIPDFVAKDPKKQPVWEITGAEFTNQGVHTADGISIRF 717
Query: 576 PRIDRVRYDKPWHDCLDVQSFVELVHSS 603
PR+ R+R DK W ++ L + S
Sbjct: 718 PRVTRIRDDKDWETATNLHELRALFNRS 745
>gi|9634713|ref|NP_039006.1| DNA ligase [Fowlpox virus]
gi|19864495|sp|Q67480.2|DNLI_FOWPN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|7271541|gb|AAF44387.1|AF198100_34 ORF FPV043 DNA ligase [Fowlpox virus]
gi|41023335|emb|CAE52589.1| A50R DNA ligase orthologue [Fowlpox virus isolate HP-438/Munich]
Length = 564
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 227/501 (45%), Gaps = 57/501 (11%)
Query: 101 NAGNFPMVAAEVLQRRQGMI----SGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKT 156
N G+ V L++ + ++ LT+ E++ L RL++ ++I + +I +
Sbjct: 85 NIGDVAYVIGSFLKKSKSVVDYATESTLTLHEVDCFLTRLSTVTRENDQIKEIKKIIPRC 144
Query: 157 NAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ 216
+++ II +I DL++ I K + H DA +F + +L+ V ++ + N +
Sbjct: 145 TPNDLRHIIRLIKHDLRMNIGPKHVLSGLHKDAYGIFKLCNNLEQVVQRSLEDNI---KP 201
Query: 217 DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLD 276
IE+ ++P LA A +K +++E K+DG+RIQIHK+ YFSRS
Sbjct: 202 LIELMVPLQPMLASACKTFSEAVKKCPNG-IIVEFKYDGERIQIHKHDKNFKYFSRSLKP 260
Query: 277 HSEYGHAMSKIIEQNVLVDRC-------ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
+ + K+ + L+DR ILDGE+++ DT N+ FG+ +
Sbjct: 261 ITPH-----KVTDFEELLDRAFPSAKNMILDGEIILIDTETNQPLPFGT----LGINKKS 311
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
+ + +C F FD LY DT +I + L ER ++ +K +P+ L S V+
Sbjct: 312 MYHNACVCIFIFDCLYFNDTVLIDKPLIERRNIIHANIKE--------IPNRILLSEVKN 363
Query: 390 QGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA- 448
+E+ K + EG VLKD +EPG R +WLK+K +Y+
Sbjct: 364 ISTD---------EELSKLLHIVLSKNIEGFVLKDAKGVYEPGMR--RWLKIKKDYLDGC 412
Query: 449 --GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 506
D++++G YYG G + G ++ FL+ DT ++ + + G +D EL
Sbjct: 413 VMADKADLVVLGAYYGKGNKSGILSSFLMGCY-----DTKSEKWCTVTKCSGGHTDLELQ 467
Query: 507 AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEV 566
+ L + + A P + + N PDV I + + I T S
Sbjct: 468 EINDNLSV----VPFDRNAIPDWLSI--NKIHYPDVIISDISLAPVWEIIGSEFTRSSTH 521
Query: 567 FSAPYSLRFPRIDRVRYDKPW 587
++ S+RFPR R+R DK +
Sbjct: 522 TASNISIRFPRCSRIREDKTY 542
>gi|68481400|ref|XP_715339.1| dsDNA break repair ligase [Candida albicans SC5314]
gi|68481531|ref|XP_715274.1| dsDNA break repair ligase [Candida albicans SC5314]
gi|205371792|sp|P52496.3|DNLI4_CANAL RecName: Full=DNA ligase 4; Short=CaLIG4; AltName: Full=DNA ligase
IV; AltName: Full=Polydeoxyribonucleotide synthase [ATP]
4
gi|46436890|gb|EAK96245.1| dsDNA break repair ligase [Candida albicans SC5314]
gi|46436958|gb|EAK96312.1| dsDNA break repair ligase [Candida albicans SC5314]
Length = 928
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 152/625 (24%), Positives = 277/625 (44%), Gaps = 87/625 (13%)
Query: 27 KKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
KK + F++T+ + D + + +LI P ++ Y +KE LA LI + K+S
Sbjct: 48 KKAFIIKTFINTFRTHIGNDIYPSAKLIFP--EKSGRIYFIKEVALARLLIKMYKIPKES 105
Query: 85 ADAVRLINWRKGGA--------APNAGNFPMVAAEVLQRRQGMISG--GLTIKELNDLLD 134
D + L +W K + P+ A+ ++ +R+ ++ T+ ++N LD
Sbjct: 106 EDYITLHDWNKSYQRSRRFSIDEKKIRDLPLQASRIISKRRPIVDKLEEYTVPQINSSLD 165
Query: 135 RLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFN 194
+LA + +I +L L + E++W+I I+L L E+ F+ +HPD +F+
Sbjct: 166 QLALEKVSQGQIDILKPLFDNLSIPEVRWLIHILLNKSILTSMERFFFNTWHPDGYRVFS 225
Query: 195 VTCDLKLVCEKLKDRNQRHKRQDIEVGKA--VRPQLAMRIGDAHAAW-RKLHGK------ 245
+ DL+ + + + R + + +PQL+ R+ ++ +KL K
Sbjct: 226 ICNDLQKTLQFSTNPDLRLDPSQLAIHPCFKFKPQLSERLTTSYKTLVKKLQRKHEMDPP 285
Query: 246 ------------EVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKI 287
+ IE K DGDR+ +HK+G +FSR D+S YG A++K
Sbjct: 286 YEKKFQELGLENKFYIEEKMDGDRMLLHKDGDSFKFFSRRLKDYSYLYGESFQFGALTKF 345
Query: 288 IEQNVL--VDRCILDGEMLVWDTSLNRFAEFGS--NQEIAKAARDGLSSD---RQLCY-- 338
+ + ILDGEM+ +D N FG+ + I ++ R + D +Q Y
Sbjct: 346 LAHAFAGNIQSVILDGEMVAYDYERNVILPFGTLKSSAIQESVRQFTTIDQYEQQTAYPF 405
Query: 339 -FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSL 397
FD+L++ + + L R +L ++++P R E L G +S
Sbjct: 406 FLVFDILFLNGKDLTNYPLFFRKNILNRILRPIPNRFEVLDTRLGSSS------------ 453
Query: 398 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWE-PGDRSGKWLKLKPEYI-RAGSDLDVL 455
+++E+ +E + +R EG+VLK++ SK+E G R+ W+K+KPEY+ + G +LD++
Sbjct: 454 -----EDIERAIREVVSSRCEGLVLKNVQSKYEIDGFRNPDWIKVKPEYLEKFGENLDLV 508
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
+I G+ ++ L Y SFC G+ EE D +
Sbjct: 509 VI------GKSPAIKNSYMCGLKSVTDGVYY-----SFCTCANGIEIEEFDKIERLTHGK 557
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS-DIRTIRSEVFSAPYSLR 574
+ K + PP + + P WI P S++L I + I T ++ +L
Sbjct: 558 WIKTDVA--MPPE--SLIKFGTKIPTFWIH-PSDSLVLEIRARSIDTRAGTSYAVGSTLH 612
Query: 575 FPRIDRVRYDKPWHDCLDVQSFVEL 599
++R DK +C+ +Q + +
Sbjct: 613 NNHCRKIREDKSIDECVTLQEYTHI 637
>gi|453602|emb|CAA82805.1| DNA ligase [Fowlpox virus]
Length = 564
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 227/501 (45%), Gaps = 57/501 (11%)
Query: 101 NAGNFPMVAAEVLQRRQGMI----SGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKT 156
N G+ V L++ + ++ LT+ E++ L RL++ ++I + +I +
Sbjct: 85 NIGDVAYVIGSFLKKSKSVVDYATESTLTLHEVDCFLTRLSTVTRENDQIKEIKKIIPRC 144
Query: 157 NAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ 216
+++ II +I DL++ I K + H DA +F + +L+ V ++ + N +
Sbjct: 145 TPNDLRHIIRLIKHDLRMNIGPKHVLSGLHKDAYGIFKLCNNLEQVVQRSLEDNI---KP 201
Query: 217 DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLD 276
IE+ ++P LA A +K +++E K+DG+RIQIHK+ YFSRS
Sbjct: 202 LIELMVPLQPMLASACKTFSEAVKKCPNG-IIVEFKYDGERIQIHKHDKNFKYFSRSLKP 260
Query: 277 HSEYGHAMSKIIEQNVLVDRC-------ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
+ + K+ + L+DR ILDGE+++ DT N+ FG+ +
Sbjct: 261 ITPH-----KVTDFEELLDRAFPSANNMILDGEIILIDTETNQPLPFGT----LGINKKS 311
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
+ + +C F FD LY DT +I + L ER ++ +K +P+ L S V+
Sbjct: 312 MYHNACVCIFIFDCLYFNDTVLIDKPLIERRNIIHANIKE--------IPNRILLSEVKN 363
Query: 390 QGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA- 448
+E+ K + EG VLKD +EPG R +WLK+K +Y+
Sbjct: 364 ISTD---------EELSKLLHIVLSKNIEGFVLKDAKGVYEPGMR--RWLKIKKDYLDGC 412
Query: 449 --GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 506
D++++G YYG G + G ++ FL+ DT ++ + + G +D EL
Sbjct: 413 VMADKADLVVLGAYYGKGNKSGILSSFLMGCY-----DTKSEKWCTVTKCSGGHTDLELQ 467
Query: 507 AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEV 566
+ L + + A P + + N PDV I + + I T S
Sbjct: 468 EINDNLSV----VPFDRNAIPDWLSI--NKIHYPDVIISDISLAPVWEIIGSEFTRSSTH 521
Query: 567 FSAPYSLRFPRIDRVRYDKPW 587
++ S+RFPR R+R DK +
Sbjct: 522 TASNISIRFPRCSRIREDKTY 542
>gi|340345096|ref|ZP_08668228.1| DNA ligase [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339520237|gb|EGP93960.1| DNA ligase [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 590
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 152/558 (27%), Positives = 256/558 (45%), Gaps = 76/558 (13%)
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLIN--WRKGGAAPNAGNFPMVAAEVLQRRQ--GM 119
G++ V I A+ S S A + I +RK G +A A+++L++++
Sbjct: 55 GVELGVAERLAIRAIAKSAGSDSAEKKIEEEYRKSGDLGHA------ASKILEQKEQTTF 108
Query: 120 ISGGLTIKELNDLL---DRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGI 176
+ +T++ + + L +L S+ + K+ +S L+ N E K+I+ I+L L+LG+
Sbjct: 109 MMQDITVERVYENLLTIAKLEGSKTQDRKMKYISGLLNDANPNEAKFILKILLGTLRLGV 168
Query: 177 SEKSIF----------HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ-DIEVGKAVR 225
+E ++ E E +NV+ DL V E + + + + +I + +R
Sbjct: 169 AENTVMDALAIAFTGNKENRKALEHAYNVSSDLGKVAETIASKGLKGIEEFEINLFNPIR 228
Query: 226 PQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMS 285
P LA R+ A KL G E K DG+R+Q+H G ++ FSRS + + Y +
Sbjct: 229 PMLADRVKSEEEAIEKL-GNVFAAEYKLDGERVQLHIEGEKVILFSRSLENITSYYPDIV 287
Query: 286 KIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR----DGLSSDRQLCYFAF 341
+ I + + + IL+ E + + + F F QE+ R + S + F
Sbjct: 288 EKIPKTIQAQKVILEAEAVAINENTGEFLPF---QELMHRRRKYQVEKAVSQYPITVNFF 344
Query: 342 DVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHN 401
DVLY S + +ER LL+K+VK E H S V+ Q
Sbjct: 345 DVLYYDGKSCLELPYEERRNLLEKIVK------EDDYAKHIPMSMVKSQ----------- 387
Query: 402 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEY-IRAGSDLDVLIIGGY 460
+++E+F + +I + EG++LK L ++ G R WLKLK EY G LD+++IG +
Sbjct: 388 -EDIEEFLENSINSGCEGVMLKMLDKPYQAGSRGSYWLKLKREYRNELGDSLDLVVIGAF 446
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
+G GRR G+ L+A + D F S C+VGTG +DE+LD + L +
Sbjct: 447 FGKGRRTGKYGTLLLA-----SYDYDTDVFTSICKVGTGFTDEDLDQLYQILSNKVTIKK 501
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI------RTIRSEVFS-APYSL 573
P+ +S DVW E PE +I + S+I + R+E+ +L
Sbjct: 502 NPRI----------DSDMEADVWFE-PE-LVIEVVASEITLSPIHKAARNEIRKDTGLAL 549
Query: 574 RFPRID-RVRYDKPWHDC 590
RFP+ ++R +K D
Sbjct: 550 RFPKFTGKIRLEKDAEDA 567
>gi|284998454|ref|YP_003420222.1| ATP-dependent DNA ligase I [Sulfolobus islandicus L.D.8.5]
gi|284446350|gb|ADB87852.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus L.D.8.5]
Length = 601
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 135/504 (26%), Positives = 237/504 (47%), Gaps = 63/504 (12%)
Query: 124 LTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
L + E+ L ++A + +R KI +L+ L+KK + E K+++ + L++GI + +
Sbjct: 119 LKVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDAT 178
Query: 181 IFHEF----------HPDAEDLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQLA 229
+ E +N+ DL + + + ++ + K EVG +RP LA
Sbjct: 179 VLDAMAIAFGGGQSASEIVERAYNLRADLGNIAKIIVEKGIEALKTLKPEVGIPIRPMLA 238
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE 289
R+ + +K+ G +V + K+DG+R QIHK +I FSR + + + + I
Sbjct: 239 ERLSNPEEILKKVGGSALV-DYKYDGERAQIHKKDDKIFIFSRRLENITSQYPDVVEYIS 297
Query: 290 QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG----LSSDRQLCYFAFDVLY 345
+ I++GE++ D F QE+ R + + F FD++Y
Sbjct: 298 KYTEGKEFIIEGEIVAVDPESGEMRSF---QELMHRKRKSDIYEAIKEYPVNVFLFDLMY 354
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
D + L+ R +LL+ +VKP N +V+ + +NV+++
Sbjct: 355 YEDVDYTTKPLEVRRKLLESIVKP--------------NEYVKI----AHHIQVNNVEDL 396
Query: 406 EKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYG 462
+ FF I EG+++K +G + ++ G R W+KLK +Y +D +D++++GG+YG
Sbjct: 397 KSFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYG 456
Query: 463 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
G+RGG+++ L+A A P DT F S C+ +G SDE+LD + KL R ++P
Sbjct: 457 KGKRGGKISSLLMA-AYNPKTDT----FESVCKAASGFSDEQLDELQKKLMEIKRDIKHP 511
Query: 523 KRAPPSFYQVTNNSKERPDVWIESPEKSIILS---ITSDIRTIRSEVFS--APYSLRFPR 577
+ NSK PD+W+E + I+ S + T +V A S+RFPR
Sbjct: 512 RV----------NSKMEPDIWVEPVYVAEIIGAEITISPLHTCCQDVVEKDAGLSIRFPR 561
Query: 578 IDRVRYDKPWHDCLDVQSFVELVH 601
R R DK D +E+ +
Sbjct: 562 FIRWRDDKSPEDATTTDEILEMYN 585
>gi|390961360|ref|YP_006425194.1| ATP-dependent DNA ligase [Thermococcus sp. CL1]
gi|390519668|gb|AFL95400.1| ATP-dependent DNA ligase [Thermococcus sp. CL1]
Length = 559
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 158/616 (25%), Positives = 268/616 (43%), Gaps = 101/616 (16%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFL----DTYCDSVDYFSALRLILPSLDRERGSYGLKE 67
L L+ ++KT K +FL D + V Y L + P D ER G+ E
Sbjct: 6 LTELYRRLEKTTLKTLKTRFVAEFLRKTPDDVLEVVPYL-ILGKVFPDWD-ER-ELGVGE 62
Query: 68 SVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQ--GMISGGLT 125
+L + A G+S+ + + + G+ A L++++ S LT
Sbjct: 63 KLLIKSVSIATGVSEREIE----------NSVKDTGDLGESVALALKKKKQRSFFSQPLT 112
Query: 126 IKELNDLLDRLASSENRA---EKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE---- 178
IK + D ++A ++ K+ L+ L +E K++ +L ++ G++E
Sbjct: 113 IKRVYDTFVKIAEAQGEGSQDRKMKYLANLFMDAKPEEGKYLARTVLGTMRTGVAEGILR 172
Query: 179 KSIFHEFH--PD-AEDLFNVTCDLKLVCEKLK-DRNQRHKRQDIEVGKAVRPQLAMRIGD 234
+I F P+ E + +T D V + K + N+ R I+VGK +RP LA
Sbjct: 173 DAIAEAFKVKPELVERAYMLTSDFGHVAKIAKLEGNEGLSRVRIQVGKPIRPMLAQNAAS 232
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLV 294
A ++ GK E K+DG R+Q+HK+G + +SR + + + + + +++
Sbjct: 233 VKEALAEMGGK-AAFEIKYDGARVQVHKDGDRVVIYSRRLENVTRSIPEIVRAVRESLKA 291
Query: 295 DRCILDGEMLV---------WDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLY 345
++ I++GE++ + L RF + +E+ + L FDVLY
Sbjct: 292 EKAIVEGELVAVGEGGKPRPFQYVLRRFRRKYNIEEMIEKI--------PLELNLFDVLY 343
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
V +I ER E L++++ P + +R LV + +E
Sbjct: 344 VDGEGLIDTPFSERREKLEEIISPGE--------------RIRL----AEQLVTKSAEEA 385
Query: 406 EKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGR 465
E F+K+ +E EG++ K L S +EPG+R KWLK+KP DLD++IIG +G GR
Sbjct: 386 EAFYKKALELGHEGLMAKRLDSVYEPGNRGKKWLKIKPTM----EDLDLVIIGAEWGEGR 441
Query: 466 RGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE--YPK 523
R + FLVA A D + F+ +VG+G +DE+L LKP + E Y +
Sbjct: 442 RAHLLGSFLVA-----AFDPHSGEFVPVGKVGSGFTDEDLAEFTKMLKPLIVREEGKYVE 496
Query: 524 RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 583
P QVT +R SP+ + + ++LRFPR +R
Sbjct: 497 IEPKVVIQVTYQEIQR------SPK------------------YESGFALRFPRYVALRE 532
Query: 584 DKPWHDCLDVQSFVEL 599
DK + ++ +L
Sbjct: 533 DKSPEEADTIERIAQL 548
>gi|366989161|ref|XP_003674348.1| hypothetical protein NCAS_0A14110 [Naumovozyma castellii CBS 4309]
gi|342300211|emb|CCC67969.1| hypothetical protein NCAS_0A14110 [Naumovozyma castellii CBS 4309]
Length = 753
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 142/525 (27%), Positives = 235/525 (44%), Gaps = 76/525 (14%)
Query: 124 LTIKELNDLLDRLASSENR---AEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ E+ + L +A SE + KI ++ ++ E K++I + L++G++EK+
Sbjct: 262 LTVGEVFENLRLIAKSEGKDSQTRKIKLIKRMLTACEGTEAKFLIRSLESKLRIGLAEKT 321
Query: 181 IF---------HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEV----------- 220
+ HE D +D F++ L+ +K++D + +I +
Sbjct: 322 VLISLSKALLVHECK-DNKD-FDMEL-LETAEQKIRDAFCQVPNYEIVINSCLKYGIMEL 378
Query: 221 --------GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYF 270
G ++P LA + + G+ E K+DG+R Q+H +G+ + +
Sbjct: 379 ETHCSLRPGIPLKPMLAKPTKAINEILDRFQGEIFTSEYKYDGERAQVHLLSDGT-MRIY 437
Query: 271 SRSFLDHSE-YGHA-MSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARD 328
SR+ + +E Y + I ++ ILD E + WD N+ F + D
Sbjct: 438 SRNGENMTERYPEIHIRDFIADPLVTSTLILDCEAVAWDNEQNKILPFQVLSTRKRKDVD 497
Query: 329 GLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVR 388
++C FAFD+L D +I++SL+ER ++LQ+V K G +
Sbjct: 498 LKDVKVKVCLFAFDILCHNDEKLINKSLRERRQILQEVTKSVTGEFQYAT---------- 547
Query: 389 PQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEY 445
+ + N+DE++KF +++ + EG+++K L S +EP RS WLKLK +Y
Sbjct: 548 -------EMTSSNLDELQKFLDQSVHDSCEGLMVKMLDGIESHYEPSKRSRNWLKLKKDY 600
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+ +IG YYG G+R G FL+ + DT F + C++GTG SDE
Sbjct: 601 LEGIGDSLDLCVIGAYYGRGKRTGMYGGFLLGCYNQ---DT--GEFETCCKIGTGFSDEM 655
Query: 505 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRT 561
L + T+L P + PK +S PDVW E +L+ S I
Sbjct: 656 LQQLYTRLTPTV--LDGPKAT------FVYDSSAEPDVWFEPTLLFEVLTADLSLSPIYK 707
Query: 562 IRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGT 606
S + SLRFPR R R DK D + +EL + T
Sbjct: 708 AGSSTYDKGISLRFPRFIRTREDKGVEDATSSEQIIELYENQAHT 752
>gi|389852928|ref|YP_006355162.1| ATP-dependent DNA ligase [Pyrococcus sp. ST04]
gi|388250234|gb|AFK23087.1| ATP-dependent DNA ligase [Pyrococcus sp. ST04]
Length = 559
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 158/613 (25%), Positives = 277/613 (45%), Gaps = 95/613 (15%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDS-VDYFSALRL--ILPSLDRERGSYGLKES 68
L L+ ++KT K FL D +++ L L + P D G K
Sbjct: 6 LAQLYQKLEKTTMKLIKTRLVADFLKKVPDDHLEFIPYLILGDVFPEWDERELGVGEK-- 63
Query: 69 VLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNF-PMVAAEVLQRRQ-GMISGGLTI 126
LI A+ M+ DA + N + + G+ +A V +R+Q S LTI
Sbjct: 64 ----LLIKAVAMA-TGIDANEIEN-----SVKDTGDLGESIALAVKKRKQKSFFSQPLTI 113
Query: 127 KELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE----K 179
K + L ++A + ++ +K+ L+ L E K+I +L ++ G++E
Sbjct: 114 KRVYQTLVKVAETTGEGSQEKKMKYLANLFMDAEPIEAKYIARTVLGTMRTGVAEGLLRD 173
Query: 180 SIFHEFHPDAEDL---FNVTCDLKLVCEKLK-DRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+I FH E + + +T D V + K + N+ + +++GK ++P LA + +
Sbjct: 174 AIALAFHVKVELVERAYMLTSDFGFVAKVAKLEGNEGLAKVQVQIGKPIKPMLAQQAANI 233
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVD 295
A ++ G E E K+DG R+Q+HK+G +I +SR + + + + ++Q+V +
Sbjct: 234 KEALLEMGG-EAEFEIKYDGARVQVHKDGDKIIVYSRRLENVTRAIPEIVEALKQSVKPN 292
Query: 296 RCILDGEM---------LVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYV 346
+ I++GE+ L + L RF + QE+ K L+ FDVLYV
Sbjct: 293 KAIVEGELVAIGEDGRPLPFQYVLRRFRRKHNIQEMMKKIPLELN--------LFDVLYV 344
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
S+I +R + L+++++P+ G+++ +L+ V+E E
Sbjct: 345 DGESMIDVKFIDRRKKLEEIIEPN-GKIKV-----------------AENLITKKVEEAE 386
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRR 466
F+K+ +E EG++ K L + +EPG+R KWLK+KP +LD++IIG +G GRR
Sbjct: 387 AFYKKALEMGHEGLMAKRLDATYEPGNRGKKWLKIKPTM----ENLDLVIIGAEWGEGRR 442
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
+ F++ A D F+ +VG+G +DE+L LKP K E +
Sbjct: 443 AHLLGSFILG-----AYDPETGEFLEVGKVGSGFTDEDLVEFTKMLKPLIIKEEGKR--- 494
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
VWIE I++ +T +S + + ++LRFPR +R DK
Sbjct: 495 ---------------VWIEP---KIVIEVTYQ-EIQKSPKYKSGFALRFPRYVALRDDKG 535
Query: 587 WHDCLDVQSFVEL 599
D ++ +L
Sbjct: 536 PEDADTIERIAQL 548
>gi|350645177|emb|CCD60119.1| DNA ligase I, putative [Schistosoma mansoni]
Length = 749
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 178/679 (26%), Positives = 291/679 (42%), Gaps = 108/679 (15%)
Query: 5 EETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRL---ILPSLDRERG 61
E + L F I+ A R K + L + SV S+ L + L+R
Sbjct: 113 ESVPYLSLARTFECIE----ATSGRIKITEILCNFFRSVGLLSSFDLTSCVYLCLNRLGP 168
Query: 62 SY-GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMI 120
+Y G++ V L+ AL + V + + R + G+ VA E ++ RQ ++
Sbjct: 169 AYEGMELGVGETILLKALA----ATTGVGIEHMR--SSLKQHGDLGAVA-ETIRSRQKIL 221
Query: 121 SGG--LTIKELNDLLDRLAS-SENRAE--KISVLSTLIKKTNAQEMKWIIMIILKDLKLG 175
S LTI + L +AS S N A+ K+ ++ +L+ E K+II + L++G
Sbjct: 222 SAPKPLTISSVFSKLKDIASMSGNSAQNKKMEIIRSLLVACRESETKYIIRSLSGKLRIG 281
Query: 176 ISEKSIFHE---------FHPDAED---------------LFNVTCDLKL--------VC 203
++E+++ FH D + VT D+ + VC
Sbjct: 282 LAEQTVLTALGQAVAMTPFHFKVSDKSTRIINASNGMSSEQWKVTMDIAVANVKRAYCVC 341
Query: 204 EKLKDR-----NQRHKRQD----IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFD 254
+ H+ D I G ++P LA + ++ + E K+D
Sbjct: 342 PDYSRLIKALLTKSHESLDQICTITPGIPLKPMLASPTHGIYEILKRFEECDFTCEYKYD 401
Query: 255 GDRIQIH--KNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNR 312
G+R QIH +G+ H +SR+ D++ + + VL D CI+D E++ WD
Sbjct: 402 GERAQIHILPSGAS-HVYSRNQEDNTTKYPDIVNNLMSRVLPD-CIIDSEVVAWDRLAGH 459
Query: 313 FAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKG 372
F + D + Q+C + FD+L++ S+I Q L+ R E+L++V G
Sbjct: 460 ILPFQVLSTRKRKDVDESTLKVQICIYVFDILFINGISLIEQPLRIRREILREVFPRISG 519
Query: 373 RLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWE 430
SL + + DE+ F E I+ EG+++K L S +E
Sbjct: 520 EFMMAT-----------------SLDSSDTDEIATFLDEAIKGNCEGLMIKTLDRNSTYE 562
Query: 431 PGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRR 489
RS WLKLK +Y+ G LD+++IGG+YG+G+R G +L+A + PDT
Sbjct: 563 IAKRSHSWLKLKKDYLEGVGDTLDLVVIGGFYGTGKRAGRYGGYLLACYD---PDT--EE 617
Query: 490 FISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE- 548
+ + C++GTG+ D+EL +F+ + K P +YQ T + PD W E +
Sbjct: 618 YQTICKIGTGMKDDEL----ASFSEFFKNHATDKAKP--YYQYTISLI--PDQWFEPVQV 669
Query: 549 ---KSIILSITSDIRTIRSEVFSAP---YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
K+ LSI+ + + + P SLRFPR R+R DK D Q EL +
Sbjct: 670 WEVKAADLSISPGHKA--AAGLADPQKGISLRFPRFVRIRDDKKPEDATTAQQVYELYQN 727
Query: 603 SNGT-TQKGKEYGGLQDDK 620
Q G + G DD+
Sbjct: 728 QEQIKNQHGNKQTGNNDDE 746
>gi|412987999|emb|CCO19395.1| predicted protein [Bathycoccus prasinos]
Length = 954
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 150/300 (50%), Gaps = 32/300 (10%)
Query: 56 LDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPN----AGNFPMVAAE 111
LD+ER +Y LKE L++ + AL + K S R+ NW+ + GN VA E
Sbjct: 8 LDKERAAYNLKEGALSDVICLALNLDKHSEMRTRIKNWKMSSKGLDFAVICGN---VAGE 64
Query: 112 VLQRRQGMISGG---LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMII 168
+ RR SGG +TI E+N++LD + +R K L I + +E+ WI+ II
Sbjct: 65 FIGRRNKKKSGGETGMTIDEVNEMLDNMCMGNDREAKARELRKFIMRATEKEVVWIVSII 124
Query: 169 LKDLKL-GISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAV-RP 226
LKDLKL G+SEK +HP A + + DL+ CE L DRN K+ DIE G+ V
Sbjct: 125 LKDLKLGGVSEKDFLMHYHPQAYEAYTCKADLRKACEALSDRNAVLKKHDIECGEGVIIA 184
Query: 227 QLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKN----GSEIHYFSRSFLDHSEYGH 282
QLA R + K +E KFDG+R+QIH+N G + Y++R+ D G+
Sbjct: 185 QLAGRKNTPKEVAKWARSKAFAVETKFDGERVQIHRNKESLGEKCQYWTRNMNDFGPRGY 244
Query: 283 AMSKII----------------EQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAA 326
+ ++ + L +CILDGE+LV++ + F FG+ + AA
Sbjct: 245 GIMDVLFCDAAEEEGTRDTVDEHRRGLPPKCILDGEILVYNKRIKEFVPFGTIKRAFNAA 304
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 185/374 (49%), Gaps = 48/374 (12%)
Query: 333 DRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGE 392
D ++ Y FD+LY DTSVIH+ L++R++LL+ ++ + V D G+ V
Sbjct: 377 DFEIVYVPFDILYNEDTSVIHEPLRKRYDLLKGAIRGCLNKGAVKVGDTGITCAVV---S 433
Query: 393 PCWSLVAHNVDEVE--KFFKETIENRD-------------------EGIVLKDLGSKWEP 431
P +A N + E + F+ +E D EGIV+K L S W P
Sbjct: 434 PFQDDIADNESQAEIARKFRTVVEQNDPNAIAKISDCLREAQDHGEEGIVVKLLDSPWVP 493
Query: 432 GDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRR-GGEVAQFLVALAERPAPDTYPRRF 490
G+R W+KLKP+Y SD D +IIGGYYG GR G+++Q+L+ + +
Sbjct: 494 GERGHNWVKLKPDYCET-SDYDCVIIGGYYGEGRGRAGKISQWLLGVIKDGTQRDKNPTI 552
Query: 491 ISFCRVGTGLSDEELDAVVTKLKPY--FRKYEYPKRAPPSF--YQVTNNSKERPDVWIES 546
++FC+VGTG + E+ + KLK F + K ++ Y+ + E PDVWI +
Sbjct: 553 MTFCKVGTGFNREDQHYLRDKLKDLMRFNRKNVDKNYTKTYERYECSGMLGETPDVWITN 612
Query: 547 PEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHD-CLD------VQSFVEL 599
PEKS+++++ D+R + S F+APY LRFPR +R +KPW++ C D + +V
Sbjct: 613 PEKSVVMTVKGDVRLVPSHTFNAPYGLRFPRCSAIRPEKPWNEICTDKDIAETAERYVTK 672
Query: 600 VHSSNGTTQKGKEYGGLQDDKPKQF----RSSRKG----EKKNVSIVP---SHFLQTDVS 648
V G G DD+ + R + KG +K+++++ +H DV
Sbjct: 673 VTHKGSRGGDGVGNGEQGDDERTAYKEYDRKNAKGLKRKQKRSLAVQEKYVAHMQPVDVR 732
Query: 649 DIKGETSIFSDMVF 662
++ + IF F
Sbjct: 733 NVVTISKIFEGTTF 746
>gi|386875694|ref|ZP_10117853.1| ATP-dependent DNA ligase domain protein [Candidatus Nitrosopumilus
salaria BD31]
gi|386806450|gb|EIJ65910.1| ATP-dependent DNA ligase domain protein [Candidatus Nitrosopumilus
salaria BD31]
Length = 588
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 142/518 (27%), Positives = 242/518 (46%), Gaps = 68/518 (13%)
Query: 102 AGNFPMVAAEVLQRRQ--GMISGGLTIKELNDLLDRLAS---SENRAEKISVLSTLIKKT 156
+G+ A+ +L+++ + +TI+ + + L ++A+ S ++ K+ +S+L+
Sbjct: 87 SGDLGHAASTILEQKTQTTFLVEDITIERVYETLFKIANLEGSHSQDMKMKYISSLLNDA 146
Query: 157 NAQEMKWIIMIILKDLKLGISEKSIFH----EFHPDAED------LFNVTCDLKLVCEKL 206
E +I+ I+L L+LGI+E ++ F + ++ +NV+ DL V E +
Sbjct: 147 TPLEASYILKILLGTLRLGIAENTVMDALAITFSGNKDNRKILQHAYNVSSDLGKVAETI 206
Query: 207 KDRN-QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGS 265
+ + ++ +I + +RP LA R+ A K+ G E E K DG+R+Q+H G
Sbjct: 207 ATKGLEGVEKFEIILFNPIRPMLADRVKSEKEAIEKM-GNEFAAEYKLDGERVQLHIEGE 265
Query: 266 EIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA 325
++ FSRS + S Y + + I + + D IL+ E++ + + F F QE+
Sbjct: 266 KVVLFSRSLENISSYYPDIIEKIPKVIQGDNIILEAEIVAINENTGEFLPF---QELMHR 322
Query: 326 AR----DGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
R + + + FD+LY S + KER E L+K + ++ +P
Sbjct: 323 RRKYKIEKAVTKYPITVNFFDILYHNGRSCLELRYKERREKLEKNI--TENEFVKYIP-- 378
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
C + N +E+ +F + +I EG++LK L ++ G R WLKL
Sbjct: 379 -----------MC---IVRNENEITEFMENSINAGSEGLMLKMLDKPYQAGSRGSHWLKL 424
Query: 442 KPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 500
K EY G LD+++IGGY+G GRR G L+A D F S C+VGTG
Sbjct: 425 KREYQNELGDSLDLVVIGGYFGKGRRTGNYGTLLLA-----TYDEDDDEFTSICKVGTGF 479
Query: 501 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI- 559
SDE+LD + L P + P+ NS+ DVW E PE +I + SDI
Sbjct: 480 SDEDLDQLFQILHPKVTIKKNPRI----------NSEMEADVWFE-PE-LVIEVVASDIT 527
Query: 560 -----RTIRSEVFS-APYSLRFPRID-RVRYDKPWHDC 590
+ R ++ +LRFP+ ++R +K D
Sbjct: 528 LSPIHKAARDKIRKDTGLALRFPKFTGKIRVEKAAEDA 565
>gi|50289929|ref|XP_447396.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526706|emb|CAG60333.1| unnamed protein product [Candida glabrata]
Length = 724
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/524 (26%), Positives = 235/524 (44%), Gaps = 77/524 (14%)
Query: 124 LTIKELNDLLDRLASSENR---AEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
L + E+ + L +A S+ + +K+ ++ ++ E K++I + L++G++EK+
Sbjct: 231 LVVGEVFENLKTIAKSQGKDSQTKKMKLIKRMLTACQGTEAKFLIRSLESKLRIGLAEKT 290
Query: 181 IF----------HEFHPDAE--------------DLFNVTCDLKLVCEKLKDRN--QRHK 214
+ E + + E D F + +LV D + +
Sbjct: 291 VLIALSKALLIHDEKYSNKEPSMDVVEQAEQKIRDAFCQVPNYELVINACLDYGIMKLDE 350
Query: 215 RQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSR 272
I+ G ++P LA + + G+ E K+DG+R Q+H K+G+ + +SR
Sbjct: 351 HCTIQPGIPLKPMLAKPTKAINEVLDRFQGQTFTSEYKYDGERAQVHLLKDGT-MRIYSR 409
Query: 273 SFLDHSE-YGHAMSK-IIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGL 330
+ + +E Y K + ILD E + WD N+ F Q + R +
Sbjct: 410 NGENMTERYPEIQIKDFLADPASTTSLILDCEAVAWDKEQNKILPF---QVLTTRKRKDV 466
Query: 331 SSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHV 387
+ + ++C FAFD+L D +I++ L +R E+L +V KP +G +
Sbjct: 467 NINEVKVRVCLFAFDILLHNDMRLINEPLSKRREVLHEVTKPVEGEFQYAT--------- 517
Query: 388 RPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPE 444
+ N+DE++KF E+++N EG+++K + S +EP RS WLKLK +
Sbjct: 518 --------QMTTSNLDELQKFLDESVKNSCEGLMVKMMDGVESYYEPSKRSRNWLKLKKD 569
Query: 445 YIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDE 503
Y+ G LD+ ++G Y+G G+R G FL+ + D F + C++GTG S+E
Sbjct: 570 YLEGVGDSLDLCVLGAYFGRGKRTGTYGGFLLGCYNADSED-----FETCCKIGTGFSEE 624
Query: 504 ELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIR 560
L + KL P P Y V ++S E PDVW E +L+ S I
Sbjct: 625 MLQTLYEKLSPTVID------GPKGTY-VFDSSAE-PDVWFEPTMLFEVLTADLSLSPIY 676
Query: 561 TIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSN 604
S V+ SLRFPR R+R DK D + +E+ + +
Sbjct: 677 KAGSSVYDKGISLRFPRFLRIRDDKSVEDATSSEQIIEMYQNQS 720
>gi|269926505|ref|YP_003323128.1| ATP-dependent DNA ligase I [Thermobaculum terrenum ATCC BAA-798]
gi|269790165|gb|ACZ42306.1| DNA ligase I, ATP-dependent Dnl1 [Thermobaculum terrenum ATCC
BAA-798]
Length = 583
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/477 (28%), Positives = 222/477 (46%), Gaps = 59/477 (12%)
Query: 144 EKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF----------HEFHPDAEDLF 193
+KI + + +++K + + + +I I + L+LG+ + +I E +
Sbjct: 134 KKIGMFADILQKLDPRSVTYICRIPVGTLRLGVGDPTILDALSFAKSGDKSLRKPLERAY 193
Query: 194 NVTCDLKLVCEKL-KDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECK 252
N T DL L+ E L KD + ++ I G VRP LA R+ A ++ + +E K
Sbjct: 194 NETSDLGLIAETLWKDGIEGVEKLSIMPGNPVRPALAERLPTPEAIINRMG--QCAVEKK 251
Query: 253 FDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNR 312
+DG R Q+HK G+E+ FSR+ D + ++ V + I +GE L +
Sbjct: 252 YDGFRCQVHKIGNEVKIFSRNLEDMTGMFPEITSGTLAMVDAETAIFEGEALAYHPLSGE 311
Query: 313 FAEFG-SNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSK 371
F F + + K + + + L FAFD+LY +++ +R E+L +K
Sbjct: 312 FLPFQVTTKRRRKHKIEEAAQELPLKLFAFDILYKNGENLMGMKYVDRREILANTIK--- 368
Query: 372 GRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEP 431
G +V D W ++A NV+++ + F E IE+ EGIV K L S ++
Sbjct: 369 GEDSLIVSD--------------W-VIADNVEKLMEVFNEAIESGLEGIVAKRLDSPYQA 413
Query: 432 GDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRF 490
G R+ W+KLK + D +D +I+G YG G+R A L+ P DT F
Sbjct: 414 GARNFNWVKLKRTHAGQLQDTVDCVIVGYIYGRGKRAQLGAGALLVAVYNPDKDT----F 469
Query: 491 ISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKS 550
+ ++GTGL+DEE VV + KPY + E P R S +P VW+E +
Sbjct: 470 QTITKIGTGLTDEEWKEVVERCKPYVTE-EKPARV---------ESIIQPSVWVEP---A 516
Query: 551 IILSITSDIRTIRSEVFSA-------PYSLRFPRIDRVR-YDKPWHDCLDVQSFVEL 599
+++ + +D RS V +A Y+LRFPR+ R DK D VQ +E+
Sbjct: 517 VVIEVLAD-EITRSPVHTAGMNGEKQGYALRFPRLVSFRESDKRPEDATTVQEIIEM 572
>gi|110761354|ref|XP_396537.3| PREDICTED: DNA ligase 3 [Apis mellifera]
Length = 1009
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 134/498 (26%), Positives = 233/498 (46%), Gaps = 49/498 (9%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+++++ L L+ E+IS +++ + ++K II +I DL++ K +
Sbjct: 287 LTIQQVDEFLQELSLLTKEEEQISHFCSIVSRCTLDDLKMIIRLIKHDLRINAGPKHVLA 346
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ---------DIEVGKAVRPQLAMRIGD 234
H DA + F + DL V E+ R+++ K + +I + V P LA
Sbjct: 347 AVHEDAYEAFQTSRDLNSVIERCLQRSKKSKSKKQESNSSNVEITLMTPVLPMLAEACKS 406
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K ++ E K+DG+R+Q+HK G+E YFSRS L H + + I +
Sbjct: 407 VEMAMKKCPNG-MLAEVKYDGERVQVHKKGNEFRYFSRSLKPVLSH-KVNLFKNYIPQAF 464
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
D ILD E+L+ DT+ + FGS KA D C F FD +Y +
Sbjct: 465 PDGDDLILDSEILMIDTNTGKPLPFGSLGIHKKAE----FKDANACLFVFDCIYYNGHVL 520
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+H+S+ ER ++L + + + +P+ + S +N ++ K +
Sbjct: 521 LHKSMIERRQILTERM--------SEIPNRIMLSETEE---------IYNSQDLAKMIAK 563
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ SK+EPG R WLK+K +Y+ G+ D++++G +YG+G +GG
Sbjct: 564 ILNMGLEGLVLKDIHSKYEPGKRH--WLKVKKDYLYDGAMADSADLVVLGAWYGTGNKGG 621
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ +V TG D L ++ +L + + P + P
Sbjct: 622 MMSVFLMGCY-----DEDRDNWVTVTKVHTGHDDATLASLQDELD-MIKIGKNPTKVP-- 673
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWH 588
+ N PD + P+K + IT T + + S+RFPR+ R+R DK W
Sbjct: 674 -RWLRANKPMIPDFVAKDPKKQPVWEITGAEFTNQGVHTADGISIRFPRVTRIRRDKDWS 732
Query: 589 DCLDVQSFVELVHSSNGT 606
+ + L S+ +
Sbjct: 733 LAITLNELRNLFKKSSQS 750
>gi|296241957|ref|YP_003649444.1| ATP-dependent DNA ligase I [Thermosphaera aggregans DSM 11486]
gi|296094541|gb|ADG90492.1| DNA ligase I, ATP-dependent Dnl1 [Thermosphaera aggregans DSM
11486]
Length = 611
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 159/576 (27%), Positives = 267/576 (46%), Gaps = 85/576 (14%)
Query: 64 GLKESVLA-NCLIDALGMSKDSAD-AVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMIS 121
GL E +A LI A+ +S +S++ V I KG A +A E L+ R S
Sbjct: 62 GLPELGIAEKLLIKAISLSTNSSEKVVEEILKSKGDAG--------LAVEALKTRSLEKS 113
Query: 122 GG------------LTIKELNDLLDRLASSENRAEK---ISVLSTLIKKTNAQEMKWIIM 166
G LT+ ++ ++L R+A ++ K I +L+ L+ N +E K+I+
Sbjct: 114 KGVTLFTFAEKKQELTVNKVYEVLTRIALAQGEGSKDLKIRLLAGLLSDANPEEAKYIVR 173
Query: 167 IILKDLKLGISEKSIF----------HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ 216
+ L+LGI + +I P E +N+ DL V + L + +Q
Sbjct: 174 FVEGKLRLGIGDATIMDALSIVYAGGAHLRPLIERAYNLRADLGEVAKILASQGVEAIKQ 233
Query: 217 DIE-VGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFL 275
VG +RP LA R+ D K+ G E +E K+DG+R QIHK+G++I +SR
Sbjct: 234 ITPMVGIPIRPMLAERLSDPKEILEKVEG-EAFVEFKYDGERAQIHKDGNKIVIYSRRLE 292
Query: 276 DHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARD----GLS 331
+ + + ++ +N+ ++ IL+GE++ +D S F QE+ R
Sbjct: 293 NITHQYPDVVEMALKNIKAEKAILEGEIVAYDPSTGELKPF---QELMHRKRKYDIHVAV 349
Query: 332 SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
+ + F FD+LY + L ER + L++++ ++ + + ++R
Sbjct: 350 KENPVKVFLFDLLYEEGVDYTVKRLIERRKRLEEIIVQTE--------EFRVAEYIR--- 398
Query: 392 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAG 449
+ E+EKFF + I EG+++K L GS ++ G R W+K K +Y
Sbjct: 399 -------TSDPGELEKFFLQAISEGAEGVMVKALHEGSVYQAGTRGWLWIKFKRDYRSEM 451
Query: 450 SD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAV 508
D +D++++G +YG GRRGG+ L+A + P+ DT F + C+VG+G +DE+LD +
Sbjct: 452 VDTVDLVVVGAFYGRGRRGGKFGTLLMA-SYNPSNDT----FETVCKVGSGFTDEDLDKI 506
Query: 509 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS 568
LKP+ R R P + ++ PDVW+E + I+ + I + +
Sbjct: 507 PELLKPFIR-----DRKP-----LRVVAEMEPDVWVEPALVAEIIGAELTLSPIHTCAYG 556
Query: 569 -----APYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
A S+RFPR R R DK D VE+
Sbjct: 557 KIKPEAGISIRFPRFIRWRDDKKPEDATTSDELVEM 592
>gi|7493776|pir||S71741 DNA ligase (ATP) (EC 6.5.1.1) - yeast (Candida albicans)
Length = 864
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 152/625 (24%), Positives = 282/625 (45%), Gaps = 87/625 (13%)
Query: 27 KKRSKFRKFLDTYCDSV--DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
KK + F++T+ + D + + +LI P ++ Y +KE LA LI + K+S
Sbjct: 48 KKAFIIKTFINTFRTHIGNDIYPSAKLIFP--EKSGRIYFIKEVALARLLIKMYKIPKES 105
Query: 85 ADAVRLINWRK--------GGAAPNAGNFPMVAAEVLQRRQGMISG--GLTIKELNDLLD 134
D + L +W K + P+ A+ ++ +R+ ++ T+ ++N LD
Sbjct: 106 EDYITLHDWNKLYQRSRRFSIDEKKIRDLPLQASRIISKRRPIVDKLEEYTVPQINSSLD 165
Query: 135 RLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFN 194
+LA + +I +L L + E++W+I I+L L E+ F+ +HPD +F+
Sbjct: 166 QLALEKVSQGQIDILKPLFDNLSIPEVRWLIHILLNKSILTSMERFFFNTWHPDGYRVFS 225
Query: 195 VTCDLKLVCEKLKDRNQRHKRQDIEVGKA--VRPQLAMRIGDAHAAW-RKLHGK------ 245
+ DL+ + + + R + + +PQL+ R+ ++ +KL K
Sbjct: 226 ICNDLQKTLQFSTNPDLRLDPLQLAIHPCFKFKPQLSERLTTSYKTLVKKLQRKHEMDPP 285
Query: 246 ------------EVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGH-----AMSKI 287
+ IE K DGDR+ +HK+G +FSR D+S YG A++K
Sbjct: 286 YEKKFQELGLENKFYIEEKMDGDRMLLHKDGDSFKFFSRRLKDYSYLYGESFQFGALTKF 345
Query: 288 IEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIA--KAARDGLSSD---RQLCY-- 338
+ + ILDGEM+ +D N FG+ + +A ++ R + D +Q Y
Sbjct: 346 LAHAFAGNIQSVILDGEMVAYDYERNVILPFGTLKSLAIQESVRQFTTIDQYEQQTAYPF 405
Query: 339 -FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSL 397
FD+L++ + + L R +L ++++P R E L D L S
Sbjct: 406 FLVFDILFLNGKDLTNYPLFFRKNILNRILRPIPNRFEVL--DTRLGS------------ 451
Query: 398 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWE-PGDRSGKWLKLKPEYI-RAGSDLDVL 455
+++++E+ +E + +R EG+VLK++ K+E G R+ W+K+KPEY+ + G +LD++
Sbjct: 452 ---SLEDIERAIREVVSSRCEGLVLKNVQLKYEIDGFRNPDWIKVKPEYLEKFGENLDLV 508
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
+I G+ ++ L + D + I FC G+ EE D +
Sbjct: 509 VI------GKSPAIKNSYMCGL--KSVTDGF---IIVFCTCANGIEIEEFDKIERLTHGK 557
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS-DIRTIRSEVFSAPYSLR 574
+ K + PP + + P WI P S++L I + I T +++ +L
Sbjct: 558 WIKTDV--SMPPEL--LIKFGTKIPTFWIH-PSDSLVLEIRARSIDTRAGTLYAVGSTLH 612
Query: 575 FPRIDRVRYDKPWHDCLDVQSFVEL 599
++R DK +C+ +Q + +
Sbjct: 613 NNHCRKIREDKSIDECVTLQEYTHI 637
>gi|395849244|ref|XP_003797241.1| PREDICTED: DNA ligase 3 [Otolemur garnettii]
Length = 1008
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 234/497 (47%), Gaps = 53/497 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 372 LTIQEVDEFLLRLSRLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 431
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRH------KRQDIEVGKA----VRPQLAMRIG 233
P+A + F + +L+ V E++ RN++ +R+ + V + V+P LA
Sbjct: 432 ALDPNAYEAFKASRNLQDVVERIL-RNEQEVEKEPGQRRALSVQASLMTPVQPMLAEACK 490
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 491 SIEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQA 548
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ D + FG+ KAA D +C F FD +Y D S
Sbjct: 549 FPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVS 604
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L ER + L + +P+ + S ++ + + VD + + +
Sbjct: 605 LMDRPLCERRKFLHDNM--------IEIPNRIMFSEMKQVTK-----ASDLVDMINRVIR 651
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRG 467
E + EG+VLKD+ S +EPG R WLK+K +Y+ G+ D++++G +YG G +G
Sbjct: 652 EGL----EGLVLKDVKSTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGNKG 705
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G ++ FL+ D +++ + + G D L + +L + + P + P
Sbjct: 706 GMMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATLARLQKELD-MVKISKDPSKI-P 758
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKP 586
S+ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R DK
Sbjct: 759 SWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKD 815
Query: 587 WHDCLDVQSFVELVHSS 603
W ++ EL S
Sbjct: 816 WKSATNLPQLKELYQLS 832
>gi|332157848|ref|YP_004423127.1| ATP-dependent DNA ligase [Pyrococcus sp. NA2]
gi|331033311|gb|AEC51123.1| ATP-dependent DNA ligase [Pyrococcus sp. NA2]
Length = 559
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 156/613 (25%), Positives = 275/613 (44%), Gaps = 95/613 (15%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYC-DSVDYFSALRL--ILPSLDRERGSYGLKES 68
L L+ ++KT K FL D +D+ L L + P D ER G+ E
Sbjct: 6 LAQLYQKLEKTTMKLIKTRLVADFLKKVPEDHLDFIPYLILGDVFPEWD-ER-ELGVGEK 63
Query: 69 VLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNF-PMVAAEVLQRRQ-GMISGGLTI 126
+L + A G+ + + + G+ +A V +R+Q S LTI
Sbjct: 64 LLIRAVSMATGVDPQEIE----------NSVKDTGDLGESIALAVKKRKQRSFFSQPLTI 113
Query: 127 KELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE----K 179
K + L ++A + ++ +K+ L+ L E K+I +L ++ G++E
Sbjct: 114 KRVYQTLVKVAETTGEGSQEKKMKYLANLFMDAEPIEAKYIARTVLGTMRTGVAEGLLRD 173
Query: 180 SIFHEFHPDAEDL---FNVTCDLKLVCEKLK-DRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+I FH E + + +T D V + K + N+ + I++GK ++P LA + +
Sbjct: 174 AIALAFHVKVELVERAYMLTSDFGFVAKIAKAEGNEGLSKVTIQLGKPIKPMLAQQAANI 233
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVD 295
A ++ G E E K+DG R+Q+HK+G+++ +SR + + + + I + +
Sbjct: 234 KEALLEMGG-EAEFEIKYDGARVQVHKDGNKVIVYSRRLENVTRAIPEIVEAIRSAIKAE 292
Query: 296 RCILDGEM---------LVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYV 346
R I++GE+ L + L RF + +E+ K L+ FDVLYV
Sbjct: 293 RAIVEGELVAIGENGRPLPFQYVLRRFRRKHNIEEMMKKIPLELN--------LFDVLYV 344
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
TS I +R E L+++V+P+ G+++ +L+ V+E E
Sbjct: 345 DGTSYIDTEFIKRRETLERIVEPN-GKIKI-----------------AENLITRKVEEAE 386
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRR 466
+F+K +E EG++ K L + +EPG+R KWLK+KP +LD++IIG +G GRR
Sbjct: 387 EFYKRALEMGHEGLMAKRLDAVYEPGNRGKKWLKIKPTM----ENLDLVIIGAEWGEGRR 442
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
+ F++ A D F+ +VG+G +D++L LKP K E +
Sbjct: 443 AHLLGSFILG-----AYDPETGEFVEVGKVGSGFTDDDLLEFTKMLKPLIIKEEGKR--- 494
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
VW++ I++ +T +S + + ++LRFPR +R DK
Sbjct: 495 ---------------VWVQP---KIVIEVTYQ-EIQKSPKYKSGFALRFPRYVALRDDKS 535
Query: 587 WHDCLDVQSFVEL 599
D ++ +L
Sbjct: 536 PEDADTIERIAQL 548
>gi|254584268|ref|XP_002497702.1| ZYRO0F11572p [Zygosaccharomyces rouxii]
gi|238940595|emb|CAR28769.1| ZYRO0F11572p [Zygosaccharomyces rouxii]
Length = 731
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 136/517 (26%), Positives = 234/517 (45%), Gaps = 69/517 (13%)
Query: 124 LTIKELNDLLDRLASSENR---AEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ E+ L +A+++ + +KI ++ ++ E K++I + L++G++EK+
Sbjct: 241 LTVGEVFVNLRNIANAQGKDSQNKKIKLIKRMLTACQGVEAKFLIRSLESKLRIGLAEKT 300
Query: 181 IF---------HEFHPDAE--------------DLFNVTCDLKLVCEKLKDR--NQRHKR 215
+ HE D E D F + ++V + +Q HK
Sbjct: 301 VLISLSNALLRHEQGLDVEPSDEAVDKAEQSIRDAFCQVPNYEIVINTCLEHGISQLHKH 360
Query: 216 QDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRS 273
+ G ++P LA + G+ V E K+DG+R Q+H +G+ + +SR+
Sbjct: 361 CQLTPGIPLKPMLAKPTKAITEVLDRFQGQLFVSEYKYDGERAQLHLLPDGT-MRIYSRN 419
Query: 274 FLDHSE-YGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSS 332
+ +E Y + + + ILD E + WD + F + D
Sbjct: 420 GENMTERYPEIDIRDFLSDPSTESLILDCEAVAWDKEQGKILPFQVLSTRKRKDVDAKDV 479
Query: 333 DRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGE 392
++C FAFD+L +I++SL+ER + LQKV KP G
Sbjct: 480 KVRVCLFAFDLLCHNGEPLINKSLRERQDDLQKVTKPVDGEFRY---------------- 523
Query: 393 PCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA- 448
L+ N++E++ F +++++ EG+++K L S +EP RS WLKLK +Y+
Sbjct: 524 -ANKLITANIEELQHFLDQSVKDSCEGLMVKMLDGPESHYEPSKRSRNWLKLKKDYLNGV 582
Query: 449 GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAV 508
G LD+ ++G YYG G+R G FL+ + DT + + C++GTG S+E L +
Sbjct: 583 GDSLDLCVLGAYYGRGKRTGTYGGFLLGCYNQ---DT--GEYETCCKIGTGFSEELLQQL 637
Query: 509 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSE 565
+LKP + AP +FY +S ++PDVW E +L+ S + S
Sbjct: 638 YDRLKPTAME------APAAFY--VYDSAQQPDVWFEPTLLFEVLAADLSLSPVYKAGSA 689
Query: 566 VFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
+ SLRFPR R+R DK + + V+L +
Sbjct: 690 QYDKGISLRFPRFLRIRDDKSVEEATSSEQVVDLYEA 726
>gi|300708465|ref|XP_002996411.1| hypothetical protein NCER_100511 [Nosema ceranae BRL01]
gi|239605711|gb|EEQ82740.1| hypothetical protein NCER_100511 [Nosema ceranae BRL01]
Length = 592
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 141/536 (26%), Positives = 257/536 (47%), Gaps = 72/536 (13%)
Query: 103 GNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASS---ENRAEKISVLSTLIKKTNAQ 159
G+F + R+ + L+ K++ L +A ++R KI + LI
Sbjct: 98 GDFGTIGMTYRTRQLFISKKTLSAKDVVYALREIAEISGIKSRIYKIRKMLDLISSCTPI 157
Query: 160 EMKWIIMIILKDLKLGISEKSIFHEFHP--------DAEDLFNVTCDL-KLVCEKLKDR- 209
E+K++ + ++LK+ + K++ F ++ +N D+ +LV E L +
Sbjct: 158 EIKFLFRLFEENLKVKFALKTVLAAFAKLYDSAYIDKIKEAYNRRPDIEQLVIEILTNGI 217
Query: 210 NQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHY 269
+ +IE G ++P LA + A++++ K+ E K+DG+RIQIH++ +++
Sbjct: 218 STVDTNFNIEPGIPLKPMLAQPTKNISTAFKRVENKKFTCENKYDGERIQIHRHNNQMTL 277
Query: 270 FSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
+SR+ + ++ II+ N D ++DGE++ +D + F Q+++ R
Sbjct: 278 YSRNLENTTD--KYFDIIIKSNTDKD-FVIDGEVVAYDPEQKKILTF---QKLSTRKRKD 331
Query: 330 LSSDR--QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHV 387
S +C F FD+LY +I++SL++R +L K +G+
Sbjct: 332 FSKKETVNVCVFVFDILYFDGLELINKSLEDRRAILHKEFTEVEGKF------------F 379
Query: 388 RPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEY 445
+ + C N++EV++FF+++I ++ EGI++K L GS + P R W+KLK +Y
Sbjct: 380 FSEFKDC-----ENIEEVDEFFRQSINSQYEGIMIKLLGDGSNYIPSQRCNSWIKLKKDY 434
Query: 446 IRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
I +GSD D++++G YYG G+R G FL+A + + F + C++GTG D
Sbjct: 435 IESGSDSFDLVVVGAYYGKGKRTGWYGGFLLA-----SYNENDEMFETVCKIGTGFDDSL 489
Query: 505 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDI 559
L + ++ Y + PS +V + +PDVWI +P+ K+ +S S I
Sbjct: 490 LSKLYEEVNNYV-------VSIPS--RVKYKEQTKPDVWI-TPKFVWEIKAAAVS-ASPI 538
Query: 560 RTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGG 615
++ +SLRFPR R DK D D + +++V + KEY G
Sbjct: 539 YCCGIDIEEKGFSLRFPRFLNEREDK---DVTDATTSLQIVMNY-------KEYEG 584
>gi|367001580|ref|XP_003685525.1| hypothetical protein TPHA_0D04570 [Tetrapisispora phaffii CBS 4417]
gi|357523823|emb|CCE63091.1| hypothetical protein TPHA_0D04570 [Tetrapisispora phaffii CBS 4417]
Length = 736
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 149/547 (27%), Positives = 251/547 (45%), Gaps = 102/547 (18%)
Query: 124 LTIKELNDLLDRLASS---ENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LTI ++ + L ++AS+ +++ KI ++ ++ + E K++I + L++G++EK+
Sbjct: 222 LTISDVFNNLKKIASATGKDSQLRKIKLIKQMLSASKGLEAKFLIRSLESKLRIGLAEKT 281
Query: 181 IF---------HEFHP-------DAEDLFNVTCDLKLVCE-KLKDRNQRHKRQDIEV--- 220
+ HE D ED+ ++ DL E KL++ + + +I +
Sbjct: 282 VLISLSKALLLHEHWKEKGESKFDEEDVESM--DLIEQAEAKLREAHCQVPNYEIVINLC 339
Query: 221 ----------------GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-N 263
G ++P LA GKE + E K+DG+R Q+H
Sbjct: 340 LQDGILNIDKTCTLRPGIPLKPMLAKPTKAITEVLNAFQGKEFISEYKYDGERAQVHLLE 399
Query: 264 GSEIHYFSRSF---------LDHSEYGHAMSKIIE----QNVL--VDRCILDGEMLVWDT 308
G E+ +SR+ LD ++ + I +N + V ILD E++ WD
Sbjct: 400 GGEMRIYSRNGENMTERYPELDVKDFLCVVKAITNDQEGENAIQPVKDIILDCEVVAWDV 459
Query: 309 SLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVK 368
+ F + D ++C FAFD+LY+ + +I++SL+ER E+L+KV
Sbjct: 460 EQKKILPFQVLTTRKRKNVDLKDVKVRVCLFAFDLLYLNNEGMINKSLRERQEILRKVT- 518
Query: 369 PSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG-- 426
LVP + + SL+ ++DE++ F + ++N EG+++K L
Sbjct: 519 -------VLVPG---------EFQYATSLITSDMDELQTFLDQAVKNSCEGLMVKMLDGE 562
Query: 427 -SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPD 484
S +EP RS WLKLK +Y+ G LD++++G Y+G G+R G FL+ D
Sbjct: 563 ESHYEPSKRSRNWLKLKKDYLDGVGDSLDLVVMGAYFGKGKRTGSYGGFLLGCYNE---D 619
Query: 485 TYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWI 544
T + F + C++GTG SDE L + T L+P PP Y +S PDVW
Sbjct: 620 T--QEFETCCKIGTGFSDEMLGNLHTLLQP------TEIDNPPMTY--IYDSSAEPDVWF 669
Query: 545 ESPEKSIILSITSDIRTIRSEVFSA-------PYSLRFPRIDRVRYDKPWHDCLDVQSFV 597
++ K + +T+D+ S V+ A SLRFPR R+R DK D + +
Sbjct: 670 QA--KVLFEVLTADLSL--SPVYKAGNSRYDKGISLRFPRFLRIREDKDVTDGTTSEDII 725
Query: 598 ELVHSSN 604
E S +
Sbjct: 726 EFYESQS 732
>gi|291405585|ref|XP_002719279.1| PREDICTED: DNA ligase (ATP) 3 isoform 3 [Oryctolagus cuniculus]
Length = 952
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 232/497 (46%), Gaps = 53/497 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 374 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 433
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKA----------VRPQLAMRIG 233
P+A + F + +L+ V E++ RN++ ++ +A V+P LA
Sbjct: 434 ALDPNAYEAFKASRNLQDVVERVL-RNEQEVEKEPGCKRALSVQASLMTPVQPMLAEACK 492
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 493 SIEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQA 550
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ D + + FG+ KAA D +C F FD +Y D S
Sbjct: 551 FPGGHSMILDSEVLLIDNNTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVS 606
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L ER +LL + +P+ + S ++ + + D + + +
Sbjct: 607 LMDRPLCERRKLLHDNM--------VEIPNRIMFSEMKR-----VTKASDLADMINRVIR 653
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRG 467
E + EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +G
Sbjct: 654 EGL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 707
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G ++ FL+ D +++ + + G D L + +L + + P + P
Sbjct: 708 GMMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATLARLQKELD-MVKISKDPSKI-P 760
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKP 586
S+ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R DK
Sbjct: 761 SWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKD 817
Query: 587 WHDCLDVQSFVELVHSS 603
W ++ EL S
Sbjct: 818 WKSATNLPQLKELYQLS 834
>gi|291405581|ref|XP_002719277.1| PREDICTED: DNA ligase (ATP) 3 isoform 1 [Oryctolagus cuniculus]
Length = 1012
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 232/497 (46%), Gaps = 53/497 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 375 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 434
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKA----------VRPQLAMRIG 233
P+A + F + +L+ V E++ RN++ ++ +A V+P LA
Sbjct: 435 ALDPNAYEAFKASRNLQDVVERVL-RNEQEVEKEPGCKRALSVQASLMTPVQPMLAEACK 493
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 494 SIEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQA 551
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ D + + FG+ KAA D +C F FD +Y D S
Sbjct: 552 FPGGHSMILDSEVLLIDNNTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVS 607
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L ER +LL + +P+ + S ++ + + D + + +
Sbjct: 608 LMDRPLCERRKLLHDNM--------VEIPNRIMFSEMKRVTK-----ASDLADMINRVIR 654
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRG 467
E + EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +G
Sbjct: 655 EGL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 708
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G ++ FL+ D +++ + + G D L + +L + + P + P
Sbjct: 709 GMMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATLARLQKELD-MVKISKDPSKI-P 761
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKP 586
S+ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R DK
Sbjct: 762 SWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKD 818
Query: 587 WHDCLDVQSFVELVHSS 603
W ++ EL S
Sbjct: 819 WKSATNLPQLKELYQLS 835
>gi|254572497|ref|XP_002493358.1| DNA ligase found in the nucleus and mitochondria [Komagataella
pastoris GS115]
gi|238033156|emb|CAY71179.1| DNA ligase found in the nucleus and mitochondria [Komagataella
pastoris GS115]
Length = 744
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 147/544 (27%), Positives = 242/544 (44%), Gaps = 82/544 (15%)
Query: 103 GNFPMVAAEVLQRRQGMI-SGGLTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNA 158
G+ +VA R+ M S LTI + + L ++A S ++A KI +++ ++
Sbjct: 229 GDIGLVAQNSRSRQPTMFKSKPLTIHSVFENLTKIAKSSGNASQARKIGLINQMLTTCEG 288
Query: 159 QEMKWIIMIILKDLKLGISEKSIF-----------HEF-----HPDAEDLFNVTCDLK-- 200
E K+++ + L++ EKS+ HE H ++L + +K
Sbjct: 289 SEAKFLMRSLEGKLRINFGEKSVLVALSKAFSEYEHELSSKKGHVSPQELVDAEEAIKKA 348
Query: 201 ---------LVCEKLK-DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIE 250
+V E LK + ++ G ++P LA HG+E E
Sbjct: 349 FSQIPNYEIIVDEALKYGISNLATHCTLKPGIPLKPMLAKPTKSITEVLDHFHGQEFTCE 408
Query: 251 CKFDGDRIQIH-KNGSEIHYFSRSFLDHSE----YGHAMSKIIEQNVLVDRCILDGEMLV 305
K+DG+R Q+H + + +SR+ D S+ +S+I Q V ILD E +
Sbjct: 409 YKYDGERAQLHVQEDGTVKIYSRNSEDMSQRYPDLIDVVSQIKTQCNGVITLILDCECVA 468
Query: 306 WDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHEL 362
WD + F Q ++ R +++ Q+C FAFD+L++ S++ LKER ++
Sbjct: 469 WDGEKGKILPF---QVLSTRKRKDVNAKDIKVQVCLFAFDILFLNGKSLLELPLKERRKI 525
Query: 363 LQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVL 422
L + VKP +G+ + ++ A NV E++ F +++++ EG+++
Sbjct: 526 LHENVKPIEGKFQF-----------------AEAMDADNVAEIQHFLDQSVKDSCEGLMV 568
Query: 423 KDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALA 478
K L S +EP RS WLKLK +Y+ G LD+ ++GGY G G+R G FL+A
Sbjct: 569 KMLDGDKSHYEPSKRSVNWLKLKKDYLEGVGDSLDLAVVGGYIGKGKRTGWYGGFLLACY 628
Query: 479 ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKE 538
+ + + + C++GTG S+E L + LKP + P FY V + S
Sbjct: 629 NEDSGE-----YETCCKIGTGFSEEMLQTLSGTLKPTVI------QQPKPFY-VYDAS-- 674
Query: 539 RPDVWIESPEKSIILSITSDIRTIRS---EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQS 595
PDVW E +L+ + + F SLRFPR RVR DK
Sbjct: 675 -PDVWFEPTLVFEVLTADLSLSPVYKAGINFFGKGVSLRFPRFIRVRDDKSPEQATSSDQ 733
Query: 596 FVEL 599
VEL
Sbjct: 734 IVEL 737
>gi|291405583|ref|XP_002719278.1| PREDICTED: DNA ligase (ATP) 3 isoform 2 [Oryctolagus cuniculus]
Length = 1011
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 232/497 (46%), Gaps = 53/497 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 374 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 433
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKA----------VRPQLAMRIG 233
P+A + F + +L+ V E++ RN++ ++ +A V+P LA
Sbjct: 434 ALDPNAYEAFKASRNLQDVVERVL-RNEQEVEKEPGCKRALSVQASLMTPVQPMLAEACK 492
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 493 SIEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQA 550
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ D + + FG+ KAA D +C F FD +Y D S
Sbjct: 551 FPGGHSMILDSEVLLIDNNTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVS 606
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L ER +LL + +P+ + S ++ + + D + + +
Sbjct: 607 LMDRPLCERRKLLHDNM--------VEIPNRIMFSEMKRVTK-----ASDLADMINRVIR 653
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRG 467
E + EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +G
Sbjct: 654 EGL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 707
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G ++ FL+ D +++ + + G D L + +L + + P + P
Sbjct: 708 GMMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATLARLQKELD-MVKISKDPSKI-P 760
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKP 586
S+ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R DK
Sbjct: 761 SWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKD 817
Query: 587 WHDCLDVQSFVELVHSS 603
W ++ EL S
Sbjct: 818 WKSATNLPQLKELYQLS 834
>gi|21227997|ref|NP_633919.1| ATP-dependent DNA ligase [Methanosarcina mazei Go1]
gi|74524266|sp|Q8PVR7.1|DNLI1_METMA RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 1
gi|20906425|gb|AAM31591.1| ATP-dependent DNA ligase [Methanosarcina mazei Go1]
Length = 579
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 146/578 (25%), Positives = 269/578 (46%), Gaps = 93/578 (16%)
Query: 59 ERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQG 118
E + G+K+ + + A G++++ + RK A G+ VA E+ ++R+
Sbjct: 54 ENTTLGIKDMLAIRAIAGAYGVTRE--------DVRKRYA--RTGDLGDVAFELSKKRES 103
Query: 119 MISGGLTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNAQEMKWIIMIILKDLKLG 175
LTI+++ L ++ + + EK ++ S +++K +E K+I+ ++L L+LG
Sbjct: 104 ----SLTIEDVFQRLLQIRETSGKGSQEEKTALFSDILQKATPEEGKYIVRLVLGRLRLG 159
Query: 176 ISEKSIFHEFH----------PDAEDLFNVTCDLKLVCEKLKDRNQRHKR-QDIEVGKAV 224
++ + F ++ ++V D+ + + L + R I+ G+ V
Sbjct: 160 FGDQFLLEAFAIAFTGDKKHAAKIKESYSVCTDIGELAKILAENGARATGFISIKPGRPV 219
Query: 225 RPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAM 284
+ L+ R+ +++ GK+ E K+DG+R+Q+HK G I FSR D + +
Sbjct: 220 KSMLSQRVESFEELEKRVKGKKAA-EEKYDGERVQVHKTGEGIKAFSRRLEDITSQYPEI 278
Query: 285 SKIIEQNVLVDRCILDGEMLVW---DTSLNRFAEFGSNQEIAKAARD-GLSSDRQLC--- 337
+ + + V + +LDGE++ + + + NR EF Q + + R + + R+ C
Sbjct: 279 IEDVRKTVPANEIVLDGEIVAYAELERNGNRIEEFYPFQNLMQRRRKYEIENYRKKCPVA 338
Query: 338 YFAFDVLYVGDTSVIHQSLKERHELLQ-KVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
F FD+LY+ ++ + ER LL+ VV+ RL
Sbjct: 339 VFFFDILYLNGEPLLKRPYPERRALLEMNVVESGIIRL-------------------SKR 379
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIRAGSD-LD 453
+V +V+E+E FF ETIE EGIV+K + S +E G RS W K K EY + D
Sbjct: 380 IVTESVEEIEDFFNETIEKGLEGIVVKSMSSNSYYEAGKRSWFWFKWKQEYSEGMRETFD 439
Query: 454 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 513
++++G YYG GRR G L A+ + +RF + +VGTG ++ + + + L
Sbjct: 440 LVVVGSYYGRGRRKGSFGALLCAVLNKEG-----QRFETLTKVGTGFTEADAEEINRLLS 494
Query: 514 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP--- 570
+ E PK V+ PD++IE ++++ + + SE+ ++P
Sbjct: 495 DHIVS-EIPK-------GVSIKKGMLPDIFIEP---AVVIEV------LGSEITNSPGHT 537
Query: 571 ---------YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+LRFPR R+R+DK +D + V+ +L
Sbjct: 538 AGEGEEETGLALRFPRFLRIRHDKTPYDAMTVKEVRDL 575
>gi|269986752|gb|EEZ93032.1| DNA ligase I, ATP-dependent Dnl1 [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 577
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 140/493 (28%), Positives = 232/493 (47%), Gaps = 69/493 (13%)
Query: 144 EKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH----------EFHPDAEDLF 193
EKI LS LI T+ E K+II ++ L+LG+ E +I +F + E F
Sbjct: 129 EKIKGLSDLIASTSPIESKFIIRFVMGKLRLGVGEATIMEALSKARTGSRQFKANIERAF 188
Query: 194 NVTCDLKLVCEKLKDRNQRH-KRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECK 252
N+ DL V E L + + + +I K +RP LA R+G + K+ GK I+ K
Sbjct: 189 NLCSDLGYVAEVLYSKGEEGINKFEIAAMKPIRPALAERLGSSKEILEKM-GK-CAIDQK 246
Query: 253 FDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVD--RCILDGEMLVWDTSL 310
DG R Q+HK E+ FSR+ D + H M +++E+ +D I+DGE L +D +
Sbjct: 247 LDGFRAQVHKKDKEVRVFSRNLEDIT---HFMPEVVEEVKKIDCEDLIIDGEALTYDENT 303
Query: 311 NRFAEFG-SNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKP 369
N F + Q K + +S + L F FD++ ++I++ +R ELL K+
Sbjct: 304 NVLYPFQITIQRKRKHNVEEISQELPLRLFVFDIMLFNKKNMINEPYTKRRELLDKLFSN 363
Query: 370 SKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKW 429
+ +T + ++ N +++KFF TIE EGIV K L S +
Sbjct: 364 TNTISKTKM------------------IITDNEKDIDKFFDLTIEQGLEGIVAKRLDSTY 405
Query: 430 EPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPR 488
G R+ W+K+K Y +D +D++I+G + G G+R A F + D+
Sbjct: 406 SAGARNFNWIKMKRSYKSKLNDTIDLVILGYFKGRGQR----ASFGLGAVLAGVYDSKED 461
Query: 489 RFISFCRVGTGLSDE---ELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE 545
+F S +VG+G S+E +L ++ ++K + P R +S +PDVW+
Sbjct: 462 KFKSITKVGSGFSEEQFKQLFKILNEIKVDIK----PARV---------DSIMQPDVWV- 507
Query: 546 SPEKSIILSITSDIRTIRSEVFSA------PYSLRFPR-IDRVRYDKPWHDCLDVQSFVE 598
P+ ++++ +D RS +A Y+LRFPR + +R DK D V +E
Sbjct: 508 VPK--YVIAVKAD-EITRSPTHTAGMKDGIGYALRFPRAVSFIRTDKKAEDANSVNDIIE 564
Query: 599 LVHSSNGTTQKGK 611
+ + + K +
Sbjct: 565 MYNEQKNISVKNQ 577
>gi|294495751|ref|YP_003542244.1| DNA ligase I, ATP-dependent Dnl1 [Methanohalophilus mahii DSM 5219]
gi|292666750|gb|ADE36599.1| DNA ligase I, ATP-dependent Dnl1 [Methanohalophilus mahii DSM 5219]
Length = 569
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 137/527 (25%), Positives = 239/527 (45%), Gaps = 77/527 (14%)
Query: 98 AAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTN 157
A N G+ VA+ + +R++ ++ + + D ++ ++ KI++L+ ++ K
Sbjct: 84 AFGNQGDLGDVASALNERQRSSLTLNYVFQHFVQIRD-ISGKGSQKRKINLLAEVLSKAR 142
Query: 158 AQEMKWIIMIILKDLKLGISEKSIFHEFH----------PDAEDLFNVTCDLKLVCEKLK 207
E ++I+ I +L+LG EK + ED +N+ D+ + E L
Sbjct: 143 PLESRYIMRIAQGNLRLGFGEKFLLEALALAFTGSRDNTSKVEDTYNICTDIGQLGESLA 202
Query: 208 DRNQRH-KRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSE 266
+ + I++G+ V+ LA R+ K G + E K+DG+R+Q+H +G
Sbjct: 203 NHGMDSLGKFSIKIGRPVQMMLASRVDTMEELNEKFSGT-MAAEEKYDGERVQVHVDGDN 261
Query: 267 IHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAA 326
I FSR S + + ++V ++ +LDGE++ + R EF QE+ +
Sbjct: 262 IKAFSRRLTYISAQFPDVIEAARESVKAEKIVLDGEIVAY-----RQGEFRPFQELMQRR 316
Query: 327 R----DGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
R + + F FDVLY+ S++ S ER ++L+ E LV
Sbjct: 317 RKYHVEEYVKKIPVTVFFFDVLYLNGKSLMKWSYPERRQVLE----------ENLVETEK 366
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLK 440
+ R +V+ + ++ FF + +E EGI++K + +K + PG R W+K
Sbjct: 367 VKLAGR--------VVSADFSRIQHFFDDCVEKGMEGIIIKSVKAKSTYRPGKRGWLWVK 418
Query: 441 LKPEYIR-AGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 499
K EYI D++I+G YYG GRR G L A+ +R+ + +VGTG
Sbjct: 419 WKKEYIEDVRETFDLVIVGSYYGKGRRKGSFGALLCAVLNES-----EKRYETLAKVGTG 473
Query: 500 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI 559
DE+ + + LK KY K+ + +S +PD +IE ++++ +
Sbjct: 474 FKDEDFEEINDLLK----KYSIEKKP----VNILIDSNMQPDNYIEP---AVVIEV---- 518
Query: 560 RTIRSEVFSAP------------YSLRFPRIDRVRYDKPWHDCLDVQ 594
I SE+ S+P Y+LRFPR R+RYDK D V+
Sbjct: 519 --IGSEITSSPSHTSGQENSGNGYALRFPRFLRIRYDKGPGDATTVE 563
>gi|452210460|ref|YP_007490574.1| ATP-dependent DNA ligase [Methanosarcina mazei Tuc01]
gi|452100362|gb|AGF97302.1| ATP-dependent DNA ligase [Methanosarcina mazei Tuc01]
Length = 579
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 143/578 (24%), Positives = 265/578 (45%), Gaps = 93/578 (16%)
Query: 59 ERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQG 118
E + G+K+ + + A G++++ G+ VA E+ ++R+
Sbjct: 54 ENTTLGIKDMLAIRAIAGAYGVTREDVSK----------RYARTGDLGDVAFELSKKRES 103
Query: 119 MISGGLTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNAQEMKWIIMIILKDLKLG 175
LTI+++ L ++ + + EK ++ S +++K +E K+I+ ++L L+LG
Sbjct: 104 ----SLTIEDVFQRLLQIRETSGKGSQEEKTALFSDILQKATPEEGKYIVRLVLGRLRLG 159
Query: 176 ISEKSIFHEFH----------PDAEDLFNVTCDLKLVCEKLKDRNQRHKR-QDIEVGKAV 224
++ + F ++ ++V D+ + + L + R I+ G+ V
Sbjct: 160 FGDQFLLEAFAIAFTGDKKHAAKIKESYSVCTDIGELAKILAENGARATGFISIKPGRPV 219
Query: 225 RPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAM 284
+ L+ R+ +++ GK+ E K+DG+R+Q+HK G I FSR D + +
Sbjct: 220 KSMLSQRVESFEELEKRVKGKKAA-EEKYDGERVQVHKTGEGIKAFSRRLEDITSQYPEI 278
Query: 285 SKIIEQNVLVDRCILDGEMLVW---DTSLNRFAEFGSNQEIAKAARD-GLSSDRQLC--- 337
+ + + V + +LDGE++ + + + NR EF Q + + R + + R+ C
Sbjct: 279 IEDVRKTVPANEIVLDGEIVAYAELERNGNRIEEFYPFQNLMQRRRKYEIENYRKKCPVA 338
Query: 338 YFAFDVLYVGDTSVIHQSLKERHELLQ-KVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
F FD+LY+ ++ + ER LL+ VV+ RL
Sbjct: 339 VFFFDILYLNGEPLLKRPYPERRALLEMNVVESGIIRL-------------------SKR 379
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIRAGSD-LD 453
+V +V+E+E FF ETIE EGIV+K + S +E G RS W K K EY + D
Sbjct: 380 IVTESVEEIEDFFNETIEKGLEGIVVKSMSSNSYYEAGKRSWFWFKWKQEYSEGMRETFD 439
Query: 454 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 513
++++G YYG GRR G L A+ + +RF + +VGTG ++ + + + L
Sbjct: 440 LVVVGSYYGRGRRKGSFGALLCAVLNKEG-----QRFETLTKVGTGFTEADAEEINRLLS 494
Query: 514 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP--- 570
+ E PK V+ PD++IE ++++ + + SE+ ++P
Sbjct: 495 DHIVS-EIPK-------DVSIKKGMLPDIFIEP---AVVIEV------LGSEITNSPGHT 537
Query: 571 ---------YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+LRFPR R+R+DK +D + V+ +L
Sbjct: 538 AGEGEEETGLALRFPRFLRIRHDKTPYDAMTVKEVRDL 575
>gi|328352626|emb|CCA39024.1| DNA ligase 1 [Komagataella pastoris CBS 7435]
Length = 1087
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 147/544 (27%), Positives = 242/544 (44%), Gaps = 82/544 (15%)
Query: 103 GNFPMVAAEVLQRRQGMI-SGGLTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNA 158
G+ +VA R+ M S LTI + + L ++A S ++A KI +++ ++
Sbjct: 572 GDIGLVAQNSRSRQPTMFKSKPLTIHSVFENLTKIAKSSGNASQARKIGLINQMLTTCEG 631
Query: 159 QEMKWIIMIILKDLKLGISEKSIF-----------HEF-----HPDAEDLFNVTCDLK-- 200
E K+++ + L++ EKS+ HE H ++L + +K
Sbjct: 632 SEAKFLMRSLEGKLRINFGEKSVLVALSKAFSEYEHELSSKKGHVSPQELVDAEEAIKKA 691
Query: 201 ---------LVCEKLK-DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIE 250
+V E LK + ++ G ++P LA HG+E E
Sbjct: 692 FSQIPNYEIIVDEALKYGISNLATHCTLKPGIPLKPMLAKPTKSITEVLDHFHGQEFTCE 751
Query: 251 CKFDGDRIQIH-KNGSEIHYFSRSFLDHSE----YGHAMSKIIEQNVLVDRCILDGEMLV 305
K+DG+R Q+H + + +SR+ D S+ +S+I Q V ILD E +
Sbjct: 752 YKYDGERAQLHVQEDGTVKIYSRNSEDMSQRYPDLIDVVSQIKTQCNGVITLILDCECVA 811
Query: 306 WDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHEL 362
WD + F Q ++ R +++ Q+C FAFD+L++ S++ LKER ++
Sbjct: 812 WDGEKGKILPF---QVLSTRKRKDVNAKDIKVQVCLFAFDILFLNGKSLLELPLKERRKI 868
Query: 363 LQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVL 422
L + VKP +G+ + ++ A NV E++ F +++++ EG+++
Sbjct: 869 LHENVKPIEGKFQF-----------------AEAMDADNVAEIQHFLDQSVKDSCEGLMV 911
Query: 423 KDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALA 478
K L S +EP RS WLKLK +Y+ G LD+ ++GGY G G+R G FL+A
Sbjct: 912 KMLDGDKSHYEPSKRSVNWLKLKKDYLEGVGDSLDLAVVGGYIGKGKRTGWYGGFLLACY 971
Query: 479 ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKE 538
+ + + + C++GTG S+E L + LKP + P FY V + S
Sbjct: 972 NEDSGE-----YETCCKIGTGFSEEMLQTLSGTLKPTV------IQQPKPFY-VYDAS-- 1017
Query: 539 RPDVWIESPEKSIILSITSDIRTIRS---EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQS 595
PDVW E +L+ + + F SLRFPR RVR DK
Sbjct: 1018 -PDVWFEPTLVFEVLTADLSLSPVYKAGINFFGKGVSLRFPRFIRVRDDKSPEQATSSDQ 1076
Query: 596 FVEL 599
VEL
Sbjct: 1077 IVEL 1080
>gi|433286843|pdb|4HTO|A Chain A, Crystal Structure Of The Dbd Domain Of Human Dna Ligase Iv
Apo Form
gi|433286844|pdb|4HTP|A Chain A, Crystal Structure Of The Dbd Domain Of Human Dna Ligase Iv
Bound To Artemis Peptide
gi|433286845|pdb|4HTP|B Chain B, Crystal Structure Of The Dbd Domain Of Human Dna Ligase Iv
Bound To Artemis Peptide
Length = 240
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 137/213 (64%), Gaps = 17/213 (7%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDT-----------YCDSVD-YFSALRLILPSLDRE 59
L S IQK+K A+K FR+FLD+ + D D ++ A+RLILP L+RE
Sbjct: 19 LCSTLERIQKSKGRAEKIRHFREFLDSWRKFHDALHKNHKDVTDSFYPAMRLILPQLERE 78
Query: 60 RGSYGLKESVLANCLIDALGMSKDSADAVRLINWRK-GGAAPNAGNFPMVAAEVLQRRQG 118
R +YG+KE++LA I+ L + +D DA++L+N+R G +AG+F M+A VL+ R
Sbjct: 79 RMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHGDAGDFAMIAYFVLKPR-C 137
Query: 119 MISGGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G LTI+++NDLLD +AS+ + K + L LI +++A E KW+I +I+KDLKLG
Sbjct: 138 LQKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLITQSSALEQKWLIRMIIKDLKLG 197
Query: 176 ISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKD 208
+S+++IF FH DA +L NVT DL+ VC +L D
Sbjct: 198 VSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHD 230
>gi|345805757|ref|XP_548265.3| PREDICTED: DNA ligase 3 [Canis lupus familiaris]
Length = 1001
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 141/499 (28%), Positives = 233/499 (46%), Gaps = 57/499 (11%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E++ L +L+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 373 LTIQEVDKFLLQLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 432
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRH------KRQDIEVGKA----VRPQLAMRIG 233
P+A + F + +L+ V E++ RN++ +R+ + V + V+P LA
Sbjct: 433 ALDPNAYEAFKASRNLQDVVERVL-RNEQEVEKEPGQRRALSVQASLMTPVQPMLAEACK 491
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 492 SIEHAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQA 549
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ DT + FG+ KAA D +C F FD +Y D S
Sbjct: 550 FPGGHSMILDSEVLLIDTKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVS 605
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L ER + L + +P+ + S ++ + + VD + + +
Sbjct: 606 LMDRPLSERRKFLHDNM--------VEIPNRIMFSEMKQVTK-----ASDLVDMINRVIR 652
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAG--SDL-DVLIIGGYYGSGRRG 467
E + EG+VLKD+ +EPG R WLK+K +Y+ G +D+ D++++G +YG G +G
Sbjct: 653 EGL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADMADLVVLGAFYGQGSKG 706
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP- 526
G ++ FL+ Y +C V T S DA + +L+ + K
Sbjct: 707 GMMSIFLMG--------CYDPSSQKWCTV-TKCSGGHDDATLARLQKELDMVKISKDPSK 757
Query: 527 -PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYD 584
P++ ++ N PD + P+K+ + IT RSE +A S+RFPR R+R D
Sbjct: 758 IPNWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRFPRCTRIRDD 814
Query: 585 KPWHDCLDVQSFVELVHSS 603
K W ++ EL S
Sbjct: 815 KDWKSATNLPQLKELYQLS 833
>gi|70606581|ref|YP_255451.1| ATP-dependent DNA ligase [Sulfolobus acidocaldarius DSM 639]
gi|449066802|ref|YP_007433884.1| ATP-dependent DNA ligase [Sulfolobus acidocaldarius N8]
gi|449069075|ref|YP_007436156.1| ATP-dependent DNA ligase [Sulfolobus acidocaldarius Ron12/I]
gi|76364175|sp|Q4JAM1.1|DNLI_SULAC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|68567229|gb|AAY80158.1| thermostable DNA ligase [Sulfolobus acidocaldarius DSM 639]
gi|449035310|gb|AGE70736.1| ATP-dependent DNA ligase [Sulfolobus acidocaldarius N8]
gi|449037583|gb|AGE73008.1| ATP-dependent DNA ligase [Sulfolobus acidocaldarius Ron12/I]
Length = 598
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 243/507 (47%), Gaps = 67/507 (13%)
Query: 124 LTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT++E+ + L ++A SE +R KI L+ L+KK + E K+II I L++GI + +
Sbjct: 119 LTVEEVYESLSKIALSEGEGSRDMKIRSLAGLLKKADPLEAKYIIRFIDGRLRVGIGDAT 178
Query: 181 IFHEF----------HPDAEDLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQLA 229
I P E +N+ DL + + L + + K EVG +RP LA
Sbjct: 179 IMDALANVFGGGTAARPLIERAYNLRADLGNIAKLLAENGIETIKSIKPEVGIPIRPMLA 238
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE 289
R+ D K+ GK +V + K+DG+R QIHK G +++ FSR + + + + I+
Sbjct: 239 ERLTDPSEILAKVGGKGIV-DYKYDGERAQIHKKGEKVYIFSRRLENITRQYPDVVEYIK 297
Query: 290 QNVLVDRCILDGEMLVWDTSLNRFAEFGS------NQEIAKAARDGLSSDRQLCYFAFDV 343
++ + IL+GE++ D F + +I +A + + + + FD+
Sbjct: 298 NSIKSNEVILEGEIVAIDKESGEILPFQNLMHRKRKNDIGEAIK-----EYPVNVYLFDL 352
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
+Y + L +R E L+++V + V DH V+
Sbjct: 353 MYNDGEDYTQKPLPDRREKLEEIVTQND---IVKVADHKY---------------IDKVN 394
Query: 404 EVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGY 460
E+ ++F + I + EG+++K +G S ++ G R W+KLK +Y +D +D++I+G +
Sbjct: 395 ELVEYFHQAISDGTEGVIVKSIGKDSIYQAGARGFLWIKLKKDYQSEMADSVDLVIVGAF 454
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
YG G+RGG+++ L+A A P DT F + C+V +G SD EL+ V + + +
Sbjct: 455 YGRGKRGGKLSSLLMA-AYDPDKDT----FYTVCKVASGFSDAELEEV----QKMLSEAK 505
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS--IT-SDIRTIRSEVFS--APYSLRF 575
K+ P S+ +PD+W++ + I+ IT S + T V S A S+RF
Sbjct: 506 LDKKDPRV------ESEIQPDIWVKPKYVAEIIGAEITLSPLHTCCKGVVSEEAGLSIRF 559
Query: 576 PRIDRVRYDKPWHDCLDVQSFVELVHS 602
PR R R DK + +E+ S
Sbjct: 560 PRFIRWRDDKSVEEATTPNEILEMYQS 586
>gi|365990417|ref|XP_003672038.1| hypothetical protein NDAI_0I02260 [Naumovozyma dairenensis CBS 421]
gi|343770812|emb|CCD26795.1| hypothetical protein NDAI_0I02260 [Naumovozyma dairenensis CBS 421]
Length = 967
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 165/668 (24%), Positives = 292/668 (43%), Gaps = 92/668 (13%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWR-KGGAAPNA 102
D + AL LILP R+R Y +++ L + L + K+S RL++W+ + G +
Sbjct: 80 DIYPALILILPY--RDRRIYNVRDYTLIKAICSYLKLPKNSFTEKRLLSWKQRAGRSVRL 137
Query: 103 GNFPMVAAEVLQRRQGMISGG---LTIKELNDLLDRLASSENRAEKIS--------VLST 151
+F + +E+ +R+ G +TI +LN LD L+ N +
Sbjct: 138 SSF--IVSEIKKRKSEPQVGTREEITIDKLNQCLDSLSEERNSKGSMGYRGLSDSPTFVF 195
Query: 152 LIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQ 211
++ E+++ IILK +G E + +HPDA+D +V DLK V KL D
Sbjct: 196 CLENMTFVELQFFFDIILKSRVIGGHEHKFLNVWHPDAQDYLSVVSDLKTVANKLWDPAV 255
Query: 212 RHKRQD--IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKN--GSEI 267
K D I VG PQ A ++ ++ + IE K DG+RIQ+H G+++
Sbjct: 256 HLKNDDLTINVGSPFAPQSAKKLSISYEKICAKLKHDFFIEEKMDGERIQLHYQDYGNKL 315
Query: 268 HYFSRSFLDHSE-YGHAM-----SKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+ SR D++ YG ++ SK + + V C+LDGEM+ +D N FG +
Sbjct: 316 SFLSRRGTDYTYLYGESIKDGTVSKYLHLDNNVQNCVLDGEMVTFDKERNALLPFGLVKS 375
Query: 322 IAKA--ARDGLSSD--RQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETL 377
A++ ++G++++ R L FD++Y+ S+++ L +R L+K+ P + +E L
Sbjct: 376 SARSIITQEGVANEGYRPLL-MVFDLVYLNGVSLVNIPLYQRKLYLEKIFTPERHIVELL 434
Query: 378 VPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK 437
+ + C + ++ + I EG+VLK S++ R+
Sbjct: 435 ------------RSKRC-----SDERSIKNALEHAISIGSEGVVLKHYNSRYTVASRNDD 477
Query: 438 WLKLKPEYI-RAGSDLDVLIIGGYYG------------------SGRRGGEV----AQFL 474
W+K+KPEY+ + G ++D+++IG G G E+ +Q
Sbjct: 478 WIKVKPEYLEQFGENMDLIVIGKDPGKKDSLMCGLAVVEEDEPEIDEDGNEIVNLDSQDS 537
Query: 475 VALAERPAPDTYPR-----RFISFCRVGTGLSDEELDAVVTKLKPYFRKY-EYPKRAPPS 528
+ E + R RF+SFC + G+S EE + K ++K E P PPS
Sbjct: 538 IGEGEDKEGNEIEREKTIKRFVSFCSIANGISQEEFKYIGRITKGCWKKSDEIP---PPS 594
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSE-----VFSAPYSLRFPRIDRVRY 583
+ P WI+ P+ SI++ + + R++ ++ F +L ++R
Sbjct: 595 --DLLEFGSRVPAEWID-PKDSIVIEVKA--RSLNNDEEATKKFKTGITLYGGYCRQIRE 649
Query: 584 DKPWHDCLDVQSFVELVHSSNGTTQKGKEYG--GLQDDKPKQFRSSRKGEKKNVSIVPSH 641
DK W C + + G+ ++ L K ++ R G +K P+
Sbjct: 650 DKDWKTCYTLSELRRMKRFKLGSNKRANNDATHALDSSKRRKARRIDYGFEKYFEQTPTT 709
Query: 642 FLQTDVSD 649
Q+ + D
Sbjct: 710 LDQSRIFD 717
>gi|15606583|ref|NP_213963.1| ATP-dependent DNA ligase [Aquifex aeolicus VF5]
gi|2983805|gb|AAC07362.1| DNA ligase (ATP dependent) [Aquifex aeolicus VF5]
Length = 585
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 144/514 (28%), Positives = 240/514 (46%), Gaps = 83/514 (16%)
Query: 122 GGLTIKELNDLLDRLASS---ENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE 178
G LT++E+ + L +A + ++ KIS+ ++L+KK E K+++ I + L+LGI +
Sbjct: 108 GTLTVEEVYNGLLNIAKAVGIGSQERKISIFASLLKKATPLEAKYLLRTITERLRLGIGD 167
Query: 179 KSIFHEF----------HPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ-DIEVGKAVRPQ 227
+I E +N+T DL V + L ++ +Q I+VG+ VRP
Sbjct: 168 NTILEALSIAFTGSSVNREVVERAYNLTSDLGYVAKILAEKGLEGVKQVKIQVGRPVRPM 227
Query: 228 LAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLD----HSEYGHA 283
LA R+ RKL GK E K+DG+RIQ H+ G E + FSR + + +
Sbjct: 228 LAERMSSPILILRKLGGK-CGAEYKYDGERIQAHRKGDEFYLFSRRLENITHQYPDLIEF 286
Query: 284 MSKIIEQNVLV--DRCILD---GEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCY 338
+ + I + +V + ++D GE+ + ++R ++ + I K G
Sbjct: 287 LKEAIPHDFIVELEAVVIDPASGEIRPFQELMHRKVKYVTKYHITKYPVAG--------- 337
Query: 339 FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLV 398
F FD++Y+ + + ER E+L+KVVK + R+ LVP +
Sbjct: 338 FLFDIIYLDGEDLTLKPYPERREILEKVVKRTD-RI-GLVPRK----------------I 379
Query: 399 AHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVL 455
NV+++E FF + IE EG+V K L S ++ G R W+K K +Y +D LD++
Sbjct: 380 VDNVEDLENFFYQAIEEGCEGLVCKSLAPNSIYQAGKRGFLWIKYKRDYKSVLADTLDLV 439
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
++GG+YG G+R G L+A + P D F + +VGTG ++++ + L P
Sbjct: 440 VVGGFYGKGQRKGTFGSLLMACYD-PESDM----FKTVTKVGTGFTEDDFKKLEEILMPR 494
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY---- 571
+ +P+ NS D+W E ++L IT T+ S V + +
Sbjct: 495 KLNHRHPR----------VNSILEADMWFEP---YLVLEITGAELTL-SPVHTCGWGKVS 540
Query: 572 -----SLRFPRID-RVRYDKPWHDCLDVQSFVEL 599
LRFPR R R+DK D Q +E+
Sbjct: 541 PNRGIGLRFPRFTGRYRFDKRPEDATTEQEIIEM 574
>gi|348567743|ref|XP_003469658.1| PREDICTED: DNA ligase 3-like isoform 3 [Cavia porcellus]
Length = 951
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 229/496 (46%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 371 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 430
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 431 ALDPNAYEAFKASRNLQDVVERVLQNEQEVEKGPGQRRALSVQASLMTPVQPMLAEACKS 490
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 491 IEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 548
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 549 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 604
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ + + D + + +E
Sbjct: 605 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMKQ-----VTKASDLADMINRVIRE 651
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 652 GL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 705
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L + +L + + P + PS
Sbjct: 706 MMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATLARLQKELD-MVKISKDPSKI-PS 758
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 759 WLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 815
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 816 KSATNLPQLKELYQLS 831
>gi|860963|emb|CAA59230.1| DNA ligase III [Homo sapiens]
Length = 922
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 227/496 (45%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 285 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 344
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 345 ALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKS 404
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 405 VEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 462
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 463 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 518
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ V +D +
Sbjct: 519 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMK--------RVTKALD-LADMITR 561
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 562 VIQEGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 619
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L + +L + + P + PS
Sbjct: 620 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATLARLQNELD-MVKISKDPSKI-PS 672
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 673 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 729
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 730 KSATNLPQLKELYQLS 745
>gi|342318887|gb|EGU10843.1| DNA ligase [Rhodotorula glutinis ATCC 204091]
Length = 872
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 146/538 (27%), Positives = 253/538 (47%), Gaps = 95/538 (17%)
Query: 103 GNFPMVAAEVLQRRQGMI-SGGLTIKELNDLLDRLASS---ENRAEKISVLSTLIKKTNA 158
G+ VA R++ + S LT+K + D L ++A + +++ K+ ++ +L+ K
Sbjct: 336 GDLGEVAFNSRTRQKTLFKSKPLTVKGVFDELKKVAKTSGKDSQGRKVGLIKSLLAKCEG 395
Query: 159 QEMKWIIMIILKDLKLGISEKSIF-------------------------HEFHPDAEDLF 193
+E K++I + L++G++EK++ + AE L
Sbjct: 396 EETKFLIRSLEGKLRIGLAEKTVLVSLAHAAVTAEHNKSGKKWSRERLSAQLEEGAEILK 455
Query: 194 NVTCDLK---LVCEKLKDRNQRHKRQ--DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVV 248
+V ++ LV L D+ H ++ + G ++P LA + GK+
Sbjct: 456 SVFSEIPSYDLVVPALLDKGMSHLQEACSLTPGIPLKPMLAKPTKAITEVLDRFEGKQFT 515
Query: 249 IECKFDGDRIQIH--KNGSEIHYFSRSFLD----HSEYGHAMSKIIEQNVLVDRCILDGE 302
E K+DG+R QIH ++GS I FSR+ D + E+ + K I+ N ++D E
Sbjct: 516 CEYKYDGERAQIHYLEDGS-IKVFSRNSEDMTVKYPEFVTQLPKCIKPNT--KSFVIDAE 572
Query: 303 MLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKER 359
+ WDT R EF Q+++ R + ++ ++ FAFD+LY+ S++ ++L+ER
Sbjct: 573 AVAWDTEEKRLLEF---QKLSTRKRKDVKAEDIKVKVHLFAFDLLYLNGESLLEKNLRER 629
Query: 360 HELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEG 419
ELL+ ++P +G D A V+E++ F ++I++ EG
Sbjct: 630 RELLRDHLQPVEGEFAFAQSDD-----------------ASTVEEIQTFLDQSIKDGCEG 672
Query: 420 IVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLV 475
+++K L G+ +EP RS WLKLK +Y++ G D+++IGG YG G+R F +
Sbjct: 673 LMVKMLEGEGASYEPSRRSIHWLKLKKDYLQGVGDSFDLVVIGGDYGKGKRTNVYGAFHL 732
Query: 476 ALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNN 535
A D + C++GTG SDE L LKP E ++ ++Y +
Sbjct: 733 ACF-----DAESGTYQMICKIGTGFSDEALKQHHETLKP----LELAQKK--AYYDI--G 779
Query: 536 SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP--------YSLRFPRIDRVRYDK 585
+ + PDV+ E K + + +D+ S ++SA SLRFPR RVR DK
Sbjct: 780 TAKGPDVYFEP--KVVWEVLAADLSL--SPIYSAAKGLCGDRGISLRFPRFIRVRDDK 833
>gi|348567741|ref|XP_003469657.1| PREDICTED: DNA ligase 3-like isoform 2 [Cavia porcellus]
Length = 939
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 229/496 (46%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 371 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 430
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 431 ALDPNAYEAFKASRNLQDVVERVLQNEQEVEKGPGQRRALSVQASLMTPVQPMLAEACKS 490
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 491 IEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 548
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 549 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 604
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ + + D + + +E
Sbjct: 605 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMKQ-----VTKASDLADMINRVIRE 651
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 652 GL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 705
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L A + K + + P + PS
Sbjct: 706 MMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKI-PS 758
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 759 WLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 815
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 816 KSATNLPQLKELYQLS 831
>gi|388452388|ref|NP_001252899.1| DNA ligase 3 [Macaca mulatta]
gi|355568415|gb|EHH24696.1| DNA ligase 3 [Macaca mulatta]
gi|380812704|gb|AFE78226.1| DNA ligase 3 isoform alpha precursor [Macaca mulatta]
gi|383418321|gb|AFH32374.1| DNA ligase 3 isoform alpha precursor [Macaca mulatta]
Length = 1009
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 229/496 (46%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 372 LTIQEVDEFLLRLSRLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 431
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 432 ALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKS 491
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 492 IEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 549
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D R FG+ KAA D +C F FD +Y D S+
Sbjct: 550 PGGHSMILDSEVLLIDNKTGRPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 605
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ + + D + + +E
Sbjct: 606 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMKRVTK-----ASDLADMITRVIRE 652
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 653 GL----EGLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L + +L + + P + PS
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATLARLQNELD-MVKISKDPSKI-PS 759
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 817 KSATNLPQLKELYQLS 832
>gi|19550955|gb|AAL91592.1|AF491645_1 ligase III, DNA, ATP-dependent [Homo sapiens]
gi|1113939|gb|AAA85022.1| DNA ligase III [Homo sapiens]
Length = 862
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 227/496 (45%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 285 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 344
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 345 ALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKS 404
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 405 VEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 462
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 463 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 518
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ V +D +
Sbjct: 519 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMK--------RVTKALD-LADMITR 561
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 562 VIQEGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 619
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L + +L + + P + PS
Sbjct: 620 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATLARLQNELD-MVKISKDPSKI-PS 672
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 673 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 729
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 730 KSATNLPQLKELYQLS 745
>gi|351702200|gb|EHB05119.1| DNA ligase 3 [Heterocephalus glaber]
Length = 1013
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 223/498 (44%), Gaps = 55/498 (11%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L +L+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 373 LTIQEVDEFLLQLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 432
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ---------DIEVGKAVRPQLAMRIGD 234
P+A + F + +L+ V E++ Q K++ + V+P LA
Sbjct: 433 ALDPNAYEAFKASRNLQDVVERILQNEQEVKKEPGRKRALSVQASLMTPVQPMLAEACKS 492
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 493 IEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 550
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 551 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCVYFNDVSL 606
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ ++ +
Sbjct: 607 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMK---------QVTKASDLADMINQ 649
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
I EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 650 VIREGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 707
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP-- 526
++ FL+ D +++ + + G DA +T+L+ + K
Sbjct: 708 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHD----DATLTRLQKELDMVKISKDPSKI 758
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDK 585
PS+ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R DK
Sbjct: 759 PSWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDK 815
Query: 586 PWHDCLDVQSFVELVHSS 603
W ++ EL S
Sbjct: 816 DWKSATNLPQLKELYQLS 833
>gi|348567739|ref|XP_003469656.1| PREDICTED: DNA ligase 3-like isoform 1 [Cavia porcellus]
Length = 1010
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 229/496 (46%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 371 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 430
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 431 ALDPNAYEAFKASRNLQDVVERVLQNEQEVEKGPGQRRALSVQASLMTPVQPMLAEACKS 490
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 491 IEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 548
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 549 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 604
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ + + D + + +E
Sbjct: 605 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMKQVTK-----ASDLADMINRVIRE 651
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 652 GL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 705
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L + +L + + P + PS
Sbjct: 706 MMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATLARLQKELD-MVKISKDPSKI-PS 758
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 759 WLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 815
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 816 KSATNLPQLKELYQLS 831
>gi|14423667|sp|O67398.2|DNLI_AQUAE RecName: Full=Probable DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
Length = 584
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 144/514 (28%), Positives = 240/514 (46%), Gaps = 83/514 (16%)
Query: 122 GGLTIKELNDLLDRLASS---ENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE 178
G LT++E+ + L +A + ++ KIS+ ++L+KK E K+++ I + L+LGI +
Sbjct: 107 GTLTVEEVYNGLLNIAKAVGIGSQERKISIFASLLKKATPLEAKYLLRTITERLRLGIGD 166
Query: 179 KSIFHEF----------HPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ-DIEVGKAVRPQ 227
+I E +N+T DL V + L ++ +Q I+VG+ VRP
Sbjct: 167 NTILEALSIAFTGSSVNREVVERAYNLTSDLGYVAKILAEKGLEGVKQVKIQVGRPVRPM 226
Query: 228 LAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLD----HSEYGHA 283
LA R+ RKL GK E K+DG+RIQ H+ G E + FSR + + +
Sbjct: 227 LAERMSSPILILRKLGGK-CGAEYKYDGERIQAHRKGDEFYLFSRRLENITHQYPDLIEF 285
Query: 284 MSKIIEQNVLV--DRCILD---GEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCY 338
+ + I + +V + ++D GE+ + ++R ++ + I K G
Sbjct: 286 LKEAIPHDFIVELEAVVIDPASGEIRPFQELMHRKVKYVTKYHITKYPVAG--------- 336
Query: 339 FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLV 398
F FD++Y+ + + ER E+L+KVVK + R+ LVP +
Sbjct: 337 FLFDIIYLDGEDLTLKPYPERREILEKVVKRTD-RI-GLVPRK----------------I 378
Query: 399 AHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVL 455
NV+++E FF + IE EG+V K L S ++ G R W+K K +Y +D LD++
Sbjct: 379 VDNVEDLENFFYQAIEEGCEGLVCKSLAPNSIYQAGKRGFLWIKYKRDYKSVLADTLDLV 438
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
++GG+YG G+R G L+A + P D F + +VGTG ++++ + L P
Sbjct: 439 VVGGFYGKGQRKGTFGSLLMACYD-PESDM----FKTVTKVGTGFTEDDFKKLEEILMPR 493
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY---- 571
+ +P+ NS D+W E ++L IT T+ S V + +
Sbjct: 494 KLNHRHPR----------VNSILEADMWFEP---YLVLEITGAELTL-SPVHTCGWGKVS 539
Query: 572 -----SLRFPRID-RVRYDKPWHDCLDVQSFVEL 599
LRFPR R R+DK D Q +E+
Sbjct: 540 PNRGIGLRFPRFTGRYRFDKRPEDATTEQEIIEM 573
>gi|73747829|ref|NP_039269.2| DNA ligase 3 isoform alpha precursor [Homo sapiens]
gi|251757259|sp|P49916.2|DNLI3_HUMAN RecName: Full=DNA ligase 3; AltName: Full=DNA ligase III; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 3
gi|45751619|gb|AAH68005.1| Ligase III, DNA, ATP-dependent [Homo sapiens]
gi|119600605|gb|EAW80199.1| ligase III, DNA, ATP-dependent, isoform CRA_c [Homo sapiens]
gi|311346378|gb|ADP89974.1| DNA ligase 3 [Homo sapiens]
gi|311346381|gb|ADP89976.1| DNA ligase 3 [Homo sapiens]
gi|311346384|gb|ADP89978.1| DNA ligase 3 [Homo sapiens]
gi|311346387|gb|ADP89980.1| DNA ligase 3 [Homo sapiens]
gi|311346390|gb|ADP89982.1| DNA ligase 3 [Homo sapiens]
gi|311346393|gb|ADP89984.1| DNA ligase 3 [Homo sapiens]
gi|311346396|gb|ADP89986.1| DNA ligase 3 [Homo sapiens]
gi|311346399|gb|ADP89988.1| DNA ligase 3 [Homo sapiens]
gi|311346402|gb|ADP89990.1| DNA ligase 3 [Homo sapiens]
gi|311346405|gb|ADP89992.1| DNA ligase 3 [Homo sapiens]
gi|311346408|gb|ADP89994.1| DNA ligase 3 [Homo sapiens]
gi|311346411|gb|ADP89996.1| DNA ligase 3 [Homo sapiens]
gi|311346414|gb|ADP89998.1| DNA ligase 3 [Homo sapiens]
gi|311346417|gb|ADP90000.1| DNA ligase 3 [Homo sapiens]
gi|311346420|gb|ADP90002.1| DNA ligase 3 [Homo sapiens]
gi|311346423|gb|ADP90004.1| DNA ligase 3 [Homo sapiens]
gi|311346426|gb|ADP90006.1| DNA ligase 3 [Homo sapiens]
gi|311346429|gb|ADP90008.1| DNA ligase 3 [Homo sapiens]
gi|311346432|gb|ADP90010.1| DNA ligase 3 [Homo sapiens]
gi|311346435|gb|ADP90012.1| DNA ligase 3 [Homo sapiens]
gi|311346438|gb|ADP90014.1| DNA ligase 3 [Homo sapiens]
gi|311346441|gb|ADP90016.1| DNA ligase 3 [Homo sapiens]
gi|311346444|gb|ADP90018.1| DNA ligase 3 [Homo sapiens]
gi|311346447|gb|ADP90020.1| DNA ligase 3 [Homo sapiens]
gi|311346450|gb|ADP90022.1| DNA ligase 3 [Homo sapiens]
gi|311346453|gb|ADP90024.1| DNA ligase 3 [Homo sapiens]
gi|311346456|gb|ADP90026.1| DNA ligase 3 [Homo sapiens]
gi|311346459|gb|ADP90028.1| DNA ligase 3 [Homo sapiens]
gi|311346462|gb|ADP90030.1| DNA ligase 3 [Homo sapiens]
gi|311346465|gb|ADP90032.1| DNA ligase 3 [Homo sapiens]
gi|311346468|gb|ADP90034.1| DNA ligase 3 [Homo sapiens]
gi|311346471|gb|ADP90036.1| DNA ligase 3 [Homo sapiens]
gi|311346474|gb|ADP90038.1| DNA ligase 3 [Homo sapiens]
gi|311346477|gb|ADP90040.1| DNA ligase 3 [Homo sapiens]
gi|311346480|gb|ADP90042.1| DNA ligase 3 [Homo sapiens]
gi|311346483|gb|ADP90044.1| DNA ligase 3 [Homo sapiens]
gi|311346486|gb|ADP90046.1| DNA ligase 3 [Homo sapiens]
gi|311346489|gb|ADP90048.1| DNA ligase 3 [Homo sapiens]
gi|311346492|gb|ADP90050.1| DNA ligase 3 [Homo sapiens]
gi|311346495|gb|ADP90052.1| DNA ligase 3 [Homo sapiens]
Length = 1009
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 227/496 (45%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 431
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 432 ALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKS 491
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 492 VEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 549
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 550 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 605
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ V +D +
Sbjct: 606 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMK--------RVTKALD-LADMITR 648
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 649 VIQEGLEGLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L + +L + + P + PS
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATLARLQNELD-MVKISKDPSKI-PS 759
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 817 KSATNLPQLKELYQLS 832
>gi|73747844|ref|NP_002302.2| DNA ligase 3 isoform beta precursor [Homo sapiens]
gi|119600603|gb|EAW80197.1| ligase III, DNA, ATP-dependent, isoform CRA_a [Homo sapiens]
gi|311346379|gb|ADP89975.1| DNA ligase 3 [Homo sapiens]
gi|311346382|gb|ADP89977.1| DNA ligase 3 [Homo sapiens]
gi|311346385|gb|ADP89979.1| DNA ligase 3 [Homo sapiens]
gi|311346388|gb|ADP89981.1| DNA ligase 3 [Homo sapiens]
gi|311346391|gb|ADP89983.1| DNA ligase 3 [Homo sapiens]
gi|311346394|gb|ADP89985.1| DNA ligase 3 [Homo sapiens]
gi|311346397|gb|ADP89987.1| DNA ligase 3 [Homo sapiens]
gi|311346400|gb|ADP89989.1| DNA ligase 3 [Homo sapiens]
gi|311346403|gb|ADP89991.1| DNA ligase 3 [Homo sapiens]
gi|311346406|gb|ADP89993.1| DNA ligase 3 [Homo sapiens]
gi|311346409|gb|ADP89995.1| DNA ligase 3 [Homo sapiens]
gi|311346412|gb|ADP89997.1| DNA ligase 3 [Homo sapiens]
gi|311346415|gb|ADP89999.1| DNA ligase 3 [Homo sapiens]
gi|311346418|gb|ADP90001.1| DNA ligase 3 [Homo sapiens]
gi|311346421|gb|ADP90003.1| DNA ligase 3 [Homo sapiens]
gi|311346424|gb|ADP90005.1| DNA ligase 3 [Homo sapiens]
gi|311346427|gb|ADP90007.1| DNA ligase 3 [Homo sapiens]
gi|311346430|gb|ADP90009.1| DNA ligase 3 [Homo sapiens]
gi|311346433|gb|ADP90011.1| DNA ligase 3 [Homo sapiens]
gi|311346436|gb|ADP90013.1| DNA ligase 3 [Homo sapiens]
gi|311346439|gb|ADP90015.1| DNA ligase 3 [Homo sapiens]
gi|311346442|gb|ADP90017.1| DNA ligase 3 [Homo sapiens]
gi|311346445|gb|ADP90019.1| DNA ligase 3 [Homo sapiens]
gi|311346448|gb|ADP90021.1| DNA ligase 3 [Homo sapiens]
gi|311346451|gb|ADP90023.1| DNA ligase 3 [Homo sapiens]
gi|311346454|gb|ADP90025.1| DNA ligase 3 [Homo sapiens]
gi|311346457|gb|ADP90027.1| DNA ligase 3 [Homo sapiens]
gi|311346460|gb|ADP90029.1| DNA ligase 3 [Homo sapiens]
gi|311346463|gb|ADP90031.1| DNA ligase 3 [Homo sapiens]
gi|311346466|gb|ADP90033.1| DNA ligase 3 [Homo sapiens]
gi|311346469|gb|ADP90035.1| DNA ligase 3 [Homo sapiens]
gi|311346472|gb|ADP90037.1| DNA ligase 3 [Homo sapiens]
gi|311346475|gb|ADP90039.1| DNA ligase 3 [Homo sapiens]
gi|311346478|gb|ADP90041.1| DNA ligase 3 [Homo sapiens]
gi|311346481|gb|ADP90043.1| DNA ligase 3 [Homo sapiens]
gi|311346484|gb|ADP90045.1| DNA ligase 3 [Homo sapiens]
gi|311346487|gb|ADP90047.1| DNA ligase 3 [Homo sapiens]
gi|311346490|gb|ADP90049.1| DNA ligase 3 [Homo sapiens]
gi|311346493|gb|ADP90051.1| DNA ligase 3 [Homo sapiens]
gi|311346496|gb|ADP90053.1| DNA ligase 3 [Homo sapiens]
Length = 949
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 227/496 (45%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 431
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 432 ALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKS 491
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 492 VEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 549
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 550 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 605
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ V +D +
Sbjct: 606 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMK--------RVTKALD-LADMITR 648
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 649 VIQEGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L + +L + + P + PS
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATLARLQNELD-MVKISKDPSKI-PS 759
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 817 KSATNLPQLKELYQLS 832
>gi|395536076|ref|XP_003770046.1| PREDICTED: DNA ligase 3 [Sarcophilus harrisii]
Length = 1003
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 233/496 (46%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L +L+ ++ SVL + + A ++K II +I DLK+ K +
Sbjct: 370 LTIQEVDEFLLQLSKLTKEDDQQSVLQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 429
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHK-----RQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q + ++ + V A V+P LA
Sbjct: 430 ALDPNAYEAFKASRNLQDVVERVLANQQESEKAPGMKRALSVQAALMTPVQPMLAEACKS 489
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HK G + YFSRS L H + H I +
Sbjct: 490 IEYAMKKCPNG-MFSEIKYDGERVQVHKKGDQFSYFSRSLKPVLPH-KVAHFKDYIPQAF 547
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ DT ++ FG+ KAA D +C F FD +Y D S+
Sbjct: 548 PGGQSMILDSEVLLIDTKTSKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDISL 603
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ L S ++ + + D + + +E
Sbjct: 604 MDRPLCERRKFLHDNM--------VEIPNRILFSEMKHVTK-----ASDLADMINRVIRE 650
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 651 GL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGNKGG 704
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L + +L + + P + PS
Sbjct: 705 MMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATLARLQNELD-MVKISKDPSKI-PS 757
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ ++ N PD + P+K+ + IT ++E +A S+RFPR R+R DK W
Sbjct: 758 WLKINKNY--YPDFIVPDPKKAPVWEITG-AEFSKAEAHTADGISIRFPRCTRIRDDKDW 814
Query: 588 HDCLDVQSFVELVHSS 603
++ +L S
Sbjct: 815 KSATNLPQLKKLYQLS 830
>gi|221043184|dbj|BAH13269.1| unnamed protein product [Homo sapiens]
Length = 738
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 227/496 (45%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 101 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 160
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 161 ALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKS 220
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 221 VEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 278
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 279 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 334
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ V +D +
Sbjct: 335 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMK--------RVTKALD-LADMITR 377
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 378 VIQEGLEGLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 435
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L + +L + + P + PS
Sbjct: 436 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATLARLQNELD-MVKISKDPSKI-PS 488
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 489 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 545
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 546 KSATNLPQLKELYQLS 561
>gi|426348731|ref|XP_004041981.1| PREDICTED: DNA ligase 3 isoform 2 [Gorilla gorilla gorilla]
Length = 949
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 227/496 (45%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 431
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 432 ALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKS 491
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 492 VEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 549
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 550 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 605
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ V +D +
Sbjct: 606 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMK--------RVTKALD-LADMITR 648
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 649 VIQEGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L A + K + + P + PS
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKI-PS 759
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 817 KSATNLPQLKELYQLS 832
>gi|441677235|ref|XP_003278419.2| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 3 [Nomascus leucogenys]
Length = 1007
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 137/498 (27%), Positives = 229/498 (45%), Gaps = 55/498 (11%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 370 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 429
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 430 ALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKS 489
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 490 IEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 547
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 548 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 603
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ + + D + + +E
Sbjct: 604 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMKRVTK-----ASDLADMITRVIRE 650
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 651 GL----EGLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 704
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP-- 526
++ FL+ D +++ + + G DA +T+L+ + K
Sbjct: 705 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHD----DATLTRLQKELDMVKISKDPSKI 755
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDK 585
PS+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK
Sbjct: 756 PSWLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDK 812
Query: 586 PWHDCLDVQSFVELVHSS 603
W ++ EL S
Sbjct: 813 DWKSATNLPQLKELYQLS 830
>gi|426348729|ref|XP_004041980.1| PREDICTED: DNA ligase 3 isoform 1 [Gorilla gorilla gorilla]
Length = 1009
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 227/496 (45%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 431
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 432 ALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKS 491
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 492 VEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 549
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 550 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 605
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ V +D +
Sbjct: 606 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMK--------RVTKALD-LADMITR 648
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 649 VIQEGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L A + K + + P + PS
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKI-PS 759
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 817 KSATNLPQLKELYQLS 832
>gi|256074242|ref|XP_002573435.1| DNA ligase I [Schistosoma mansoni]
Length = 752
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 177/684 (25%), Positives = 290/684 (42%), Gaps = 115/684 (16%)
Query: 5 EETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRL---ILPSLDRERG 61
E + L F I+ A R K + L + SV S+ L + L+R
Sbjct: 113 ESVPYLSLARTFECIE----ATSGRIKITEILCNFFRSVGLLSSFDLTSCVYLCLNRLGP 168
Query: 62 SY-GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMI 120
+Y G++ V L+ AL + V + + R + G+ VA E ++ RQ ++
Sbjct: 169 AYEGMELGVGETILLKALA----ATTGVGIEHMR--SSLKQHGDLGAVA-ETIRSRQKIL 221
Query: 121 SGG--LTIKELNDLLDRLAS-SENRAE--KISVLSTLIKKTNAQEMKWIIMIILKDLKLG 175
S LTI + L +AS S N A+ K+ ++ +L+ E K+II + L++G
Sbjct: 222 SAPKPLTISSVFSKLKDIASMSGNSAQNKKMEIIRSLLVACRESETKYIIRSLSGKLRIG 281
Query: 176 ISEKSIFHE---------FHPDAED---------------LFNVTCDLKL--------VC 203
++E+++ FH D + VT D+ + VC
Sbjct: 282 LAEQTVLTALGQAVAMTPFHFKVSDKSTRIINASNGMSSEQWKVTMDIAVANVKRAYCVC 341
Query: 204 EKLKDR-----NQRHKRQD----IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFD 254
+ H+ D I G ++P LA + ++ + E K+D
Sbjct: 342 PDYSRLIKALLTKSHESLDQICTITPGIPLKPMLASPTHGIYEILKRFEECDFTCEYKYD 401
Query: 255 GDRIQIH--KNGSEIHYFSRSFLDHSE-----YGHAMSKIIEQNVLVDRCILDGEMLVWD 307
G+R QIH +G+ H +SR+ D++ + MS + + CI+D E++ WD
Sbjct: 402 GERAQIHILPSGAS-HVYSRNQEDNTTKYPDIVNNLMSXXXXKTLC---CIIDSEVVAWD 457
Query: 308 TSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVV 367
F + D + Q+C + FD+L++ S+I Q L+ R E+L++V
Sbjct: 458 RLAGHILPFQVLSTRKRKDVDESTLKVQICIYVFDILFINGISLIEQPLRIRREILREVF 517
Query: 368 KPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL-- 425
G SL + + DE+ F E I+ EG+++K L
Sbjct: 518 PRISGEFMMAT-----------------SLDSSDTDEIATFLDEAIKGNCEGLMIKTLDR 560
Query: 426 GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPD 484
S +E RS WLKLK +Y+ G LD+++IGG+YG+G+R G +L+A + PD
Sbjct: 561 NSTYEIAKRSHSWLKLKKDYLEGVGDTLDLVVIGGFYGTGKRAGRYGGYLLACYD---PD 617
Query: 485 TYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWI 544
T + + C++GTG+ D+EL +F+ + K P +YQ T + PD W
Sbjct: 618 T--EEYQTICKIGTGMKDDEL----ASFSEFFKNHATDKAKP--YYQYTISLI--PDQWF 667
Query: 545 ESPE----KSIILSITSDIRTIRSEVFSAP---YSLRFPRIDRVRYDKPWHDCLDVQSFV 597
E + K+ LSI+ + + P SLRFPR R+R DK D Q
Sbjct: 668 EPVQVWEVKAADLSISPGHKAAAG--LADPQKGISLRFPRFVRIRDDKKPEDATTAQQVY 725
Query: 598 ELVHSSNGT-TQKGKEYGGLQDDK 620
EL + Q G + G DD+
Sbjct: 726 ELYQNQEQIKNQHGNKQTGNNDDE 749
>gi|410339187|gb|JAA38540.1| ligase III, DNA, ATP-dependent [Pan troglodytes]
Length = 1009
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 227/496 (45%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 431
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 432 ALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKS 491
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 492 VEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 549
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 550 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 605
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ V +D +
Sbjct: 606 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMK--------RVTKALD-LADMITR 648
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 649 VIQEGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L A + K + + P + PS
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKI-PS 759
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 817 KSATNLPQLKELYQLS 832
>gi|332848016|ref|XP_003315567.1| PREDICTED: DNA ligase 3 isoform 1 [Pan troglodytes]
Length = 949
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 227/496 (45%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 431
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 432 ALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKS 491
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 492 VEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 549
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 550 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 605
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ V +D +
Sbjct: 606 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMK--------RVTKALD-LADMITR 648
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 649 VIQEGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L A + K + + P + PS
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKI-PS 759
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 817 KSATNLPQLKELYQLS 832
>gi|332848014|ref|XP_511409.3| PREDICTED: DNA ligase 3 isoform 2 [Pan troglodytes]
gi|410212976|gb|JAA03707.1| ligase III, DNA, ATP-dependent [Pan troglodytes]
gi|410306904|gb|JAA32052.1| ligase III, DNA, ATP-dependent [Pan troglodytes]
Length = 1009
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 227/496 (45%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 431
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 432 ALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKS 491
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 492 VEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 549
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 550 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 605
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ V +D +
Sbjct: 606 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMK--------RVTKALD-LADMITR 648
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 649 VIQEGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L A + K + + P + PS
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKI-PS 759
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 817 KSATNLPQLKELYQLS 832
>gi|397494352|ref|XP_003818045.1| PREDICTED: DNA ligase 3 [Pan paniscus]
Length = 738
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 227/496 (45%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 101 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 160
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 161 ALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKS 220
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 221 VEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 278
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 279 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 334
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ V +D +
Sbjct: 335 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMK--------RVTKALD-LADMITR 377
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 378 VIQEGLEGLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 435
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L A + K + + P + PS
Sbjct: 436 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKI-PS 488
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 489 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 545
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 546 KSATNLPQLKELYQLS 561
>gi|410259056|gb|JAA17494.1| ligase III, DNA, ATP-dependent [Pan troglodytes]
Length = 949
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 227/496 (45%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 431
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 432 ALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKS 491
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 492 VEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 549
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 550 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 605
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ V +D +
Sbjct: 606 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMK--------RVTKALD-LADMITR 648
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 649 VIQEGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L A + K + + P + PS
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKI-PS 759
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 817 KSATNLPQLKELYQLS 832
>gi|410259054|gb|JAA17493.1| ligase III, DNA, ATP-dependent [Pan troglodytes]
Length = 1009
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 227/496 (45%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 431
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 432 ALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKS 491
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 492 VEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 549
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 550 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 605
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ V +D +
Sbjct: 606 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMK--------RVTKALD-LADMITR 648
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 649 VIQEGLEGLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L A + K + + P + PS
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKI-PS 759
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 817 KSATNLPQLKELYQLS 832
>gi|340721941|ref|XP_003399371.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 3-like [Bombus
terrestris]
Length = 1013
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 224/484 (46%), Gaps = 56/484 (11%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L +L+ E+I +++ + A+++K II +I DL++ K I
Sbjct: 291 LTIQEVDEFLQQLSFLTKEDEQIRHFRSIVSRCTARDLKMIIRLIKHDLRINAGPKHILA 350
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ------------DIEVGKAVRPQLAMR 231
H DA F + DL V E+ + + + + + V P LA
Sbjct: 351 AVHDDAYKAFQTSRDLDSVVERCWQGSSKFDKPSSSPGPSSNVKITLSLMTPVLPMLAEA 410
Query: 232 IGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDH--SEYGHAMSK 286
A +K ++ E K+DG+R+Q+HK G+E YFSRS L H + + + + K
Sbjct: 411 CKSVEMAMKKCPNG-MLAEVKYDGERVQVHKKGNEFRYFSRSLKPVLPHKVNLFKNYIPK 469
Query: 287 IIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYV 346
D ILD E+L+ DT + FG+ KA D C F FD +Y
Sbjct: 470 AFPDG---DDLILDSEILMIDTKTGQPLPFGTLGIHKKAE----FKDANACLFIFDCIYY 522
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
++H+S+ ER +L++ + T +P+ + S ++ + ++
Sbjct: 523 NGAVLLHKSMMERRRILRESM--------TEIPNRIMLSEIKE---------VYKSQDLA 565
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGS 463
+ ++ EG+VLKD+ SK+EPG R WLK+K +Y+ G+ D++++G +YG+
Sbjct: 566 EMIARVLKMGLEGLVLKDIHSKYEPGKRH--WLKVKKDYLYDGAMADSADLVVLGAWYGT 623
Query: 464 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
G +GG ++ FL+ D +++ +V TG D L + +L + + P
Sbjct: 624 GNKGGMMSVFLMGCY-----DEDRGNWVTVTKVHTGHDDATLAMLQDELD-MIKIGKDPA 677
Query: 524 RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 583
+ P + N PD + P+K + IT T + + S+RFPR+ R+R
Sbjct: 678 KVP---TWLRANKPMIPDFVAKDPKKQPVWEITGAEFTNQGVHTADGISIRFPRVTRIRS 734
Query: 584 DKPW 587
DK W
Sbjct: 735 DKDW 738
>gi|297700536|ref|XP_002827303.1| PREDICTED: DNA ligase 3 isoform 3 [Pongo abelii]
Length = 949
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 229/496 (46%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 431
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 432 ALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASPMTPVQPMLAEACKS 491
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 492 VEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 549
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 550 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 605
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ + + D + + +E
Sbjct: 606 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMKR-----VTKASDLADMITRVIRE 652
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 653 GL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L + +L + + P + PS
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATLARLQKELD-MVKISKDPSKI-PS 759
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 817 KSATNLPQLKELYQLS 832
>gi|20178549|ref|NP_619970.1| CPXV188 protein [Cowpox virus]
gi|20153167|gb|AAM13628.1|AF482758_179 CPXV188 protein [Cowpox virus]
Length = 554
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 145/582 (24%), Positives = 260/582 (44%), Gaps = 54/582 (9%)
Query: 27 KKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSAD 86
K++SK + T D+ D + ++L+LP LD + K+ + +I + D
Sbjct: 21 KEKSKLIRDFITDRDATDTYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQED 76
Query: 87 AVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKI 146
++ + + G F E+ + + + LT++E++ L L+S + +I
Sbjct: 77 MLQDLGY--GYIGDTISTFFKENTEIRPKDKSI----LTLEEVDSFLTTLSSVTKESHQI 130
Query: 147 SVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKL 206
+L+ + ++K ++M+I KDLK+ + + + P+A D+F + +LK + E
Sbjct: 131 KLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPNAYDVFRKSNNLKEIIENA 190
Query: 207 KDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSE 266
+N I V + P LA + A++K + E K+DG+R+Q+HKN +E
Sbjct: 191 SKQNL--DSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNNNE 247
Query: 267 IHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIA 323
+FSR+ L H + + I + ILD E+++ D N FGS
Sbjct: 248 FAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIILDSEIVLVDEH-NVPLPFGS----L 301
Query: 324 KAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGL 383
+ + +C F FD LY + L ER L+ V+ +P+ +
Sbjct: 302 GIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNRIV 353
Query: 384 NSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKP 443
S + N ++ + + + EG+VLKD+ +EPG R +WLK+K
Sbjct: 354 FSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKR 402
Query: 444 EYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 500
+Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +G
Sbjct: 403 DYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGH 456
Query: 501 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIR 560
D L + +LK + + PK+ P + N PD +E P++S I I+
Sbjct: 457 DDNTLRVLQDQLK-MIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEF 512
Query: 561 TIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 513 TSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 554
>gi|297700534|ref|XP_002827302.1| PREDICTED: DNA ligase 3 isoform 2 [Pongo abelii]
Length = 1009
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 229/496 (46%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 431
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 432 ALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASPMTPVQPMLAEACKS 491
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 492 VEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 549
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 550 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 605
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ + + D + + +E
Sbjct: 606 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMKRVTK-----ASDLADMITRVIRE 652
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 653 GL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L A + K + + P + PS
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKI-PS 759
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 817 KSATNLPQLKELYQLS 832
>gi|193700124|ref|XP_001943689.1| PREDICTED: DNA ligase 3-like [Acyrthosiphon pisum]
Length = 875
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 128/500 (25%), Positives = 234/500 (46%), Gaps = 52/500 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LT+ ++N LD+L+ + ++ ++ K ++K II +++ DL++ K I
Sbjct: 254 LTLAKVNSFLDKLSIETTEVAQTALFKSIAKLCTGNDLKMIIRLVMHDLRINCGPKFILG 313
Query: 184 EFHPDAEDLFNVTCDLKLV------CEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHA 237
H DA + + + DLK V C+ K + + + + P LA +
Sbjct: 314 ALHSDAYEAYQTSHDLKSVVQNACSCDSSKIASNGKMNIKLSLLTPILPMLAEPCKNLDD 373
Query: 238 AWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSE--YGHAMSKIIEQNV 292
++K + E K+DG+R+Q+HK+ ++ +FSRS L H + + K +
Sbjct: 374 FFKKCPNG-IYSEIKYDGERVQLHKSETQFKFFSRSLKPVLGHKVDLFKQYIPKAFQHG- 431
Query: 293 LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVI 352
ILD E+L++D N+ FG+ I K ++ D C F FD +Y S++
Sbjct: 432 --KEIILDCEVLMYDHKTNKPLPFGT-LGIHKKSK---FEDANPCLFVFDCMYYNGVSLL 485
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
+++ ER ++L + + P KG H + S V+ HN E++ +
Sbjct: 486 DRTIVERRKILMQNMTPIKG--------HIMFSEVKE---------LHNTKELKLMVEHV 528
Query: 413 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGE 469
++ EG+VLKDL +EPG R W K+K +Y+ GS D++++G ++G+G +GG
Sbjct: 529 LKQGLEGLVLKDLTGVYEPGKRH--WQKIKKDYLFDGSMADSADLVVLGAWFGTGNKGGM 586
Query: 470 VAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSF 529
++ FL+ +++ + +V G D+ L+ + +LK + + P++ P +
Sbjct: 587 MSIFLMGCYNEAK-----KKWCTVTKVHGGHDDKTLERLQGELK-MIKISKDPEKV-PEW 639
Query: 530 YQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPWH 588
+ T PD E P+K + I S ++EV +A S+RFPR+ ++R DK W
Sbjct: 640 LKCTKTM--IPDFVAEDPKKMPVWEI-SGAEFSQAEVHTANGISIRFPRVTKIRNDKDWK 696
Query: 589 DCLDVQSFVELVHSSNGTTQ 608
+ L +S T
Sbjct: 697 TATSLTELQNLYEASKETNN 716
>gi|444720955|gb|ELW61715.1| DNA ligase 3 [Tupaia chinensis]
Length = 926
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 226/496 (45%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 285 LTIQEVDEFLLRLSKLTKEDEQQQALHDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 344
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ---------DIEVGKAVRPQLAMRIGD 234
P+A + F + +L+ V E++ Q ++Q + V+P LA
Sbjct: 345 ALDPNAYEAFKASRNLQDVVERVLRNEQEVEKQPGRRRTLSVQASLMTPVQPMLAEACKS 404
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 405 IEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 462
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 463 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 518
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ + + D + + +E
Sbjct: 519 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMKQ-----VTKASDLADMINRVIRE 565
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 566 GL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 619
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L A + K + + P + P
Sbjct: 620 MMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKI-PG 672
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 673 WLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 729
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 730 KSATNLPQLKELYQLS 745
>gi|350407883|ref|XP_003488227.1| PREDICTED: DNA ligase 3-like [Bombus impatiens]
Length = 1012
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 228/484 (47%), Gaps = 56/484 (11%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L +L+ E+I +++ + A ++K II +I DL++ K I
Sbjct: 290 LTIQEVDEFLQQLSLLTKEDEQIRHFRSIVSRCTAGDLKMIIRLIKHDLRINAGPKHILA 349
Query: 184 EFHPDAEDLFNVTCDLKLVCEKL--------KDRNQRHKRQDIEVG----KAVRPQLAMR 231
H DA F + DL V E+ K + ++++ V P LA
Sbjct: 350 AVHDDAYKAFQTSRDLDSVIERCWRGSPKFDKPSSSPGPSSNVKITLSLMTPVLPMLAEA 409
Query: 232 IGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDH--SEYGHAMSK 286
A +K ++ E K+DG+R+Q+HK G+E YFSRS L H + + + + K
Sbjct: 410 CKSVEMAMKKCPNG-MLAEVKYDGERVQVHKKGNEFRYFSRSLKPVLPHKVNLFKNYIPK 468
Query: 287 IIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYV 346
D ILD E+L+ DT + FG+ I K A D C F FD +Y
Sbjct: 469 AFPDG---DDLILDSEILMIDTKTGQPLPFGT-LGIHKKAE---FKDANACLFVFDCIYY 521
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
++H+S+ ER ++L++ + T +P+ + S ++ + ++
Sbjct: 522 NGVVLLHKSMMERRQILRESM--------TEIPNRIMLSEIKE---------VYKSQDLA 564
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGS 463
+ ++ EG+VLKD+ SK+EPG R WLK+K +Y+ G+ D++++G +YG+
Sbjct: 565 EMIARVLKMGLEGLVLKDIHSKYEPGKRH--WLKVKKDYLYDGAMADSADLVVLGAWYGT 622
Query: 464 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
G +GG ++ FL+ D +++ +V TG D L + +L + + P
Sbjct: 623 GNKGGMMSVFLMGCY-----DEDRGNWVTVTKVHTGHDDATLVMLQDELD-MIKISKDPA 676
Query: 524 RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 583
+ PS+ + N PD + P+K + IT T + + S+RFPR+ R+R
Sbjct: 677 KV-PSWLRA--NKPMIPDFVAKDPKKQPVWEITGAEFTNQGVHTADGISIRFPRVTRIRS 733
Query: 584 DKPW 587
DK W
Sbjct: 734 DKDW 737
>gi|355753913|gb|EHH57878.1| DNA ligase 3 [Macaca fascicularis]
Length = 1009
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 136/498 (27%), Positives = 229/498 (45%), Gaps = 51/498 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 372 LTIQEVDEFLLRLSRLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 431
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 432 ALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKS 491
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 492 IEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 549
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 550 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 605
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ + + D + + +E
Sbjct: 606 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMKRVTK-----ASDLADMITRVIRE 652
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 653 GL----EGLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L + +L + + P + PS
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATLARLQNELD-MVKISKDPSKI-PS 759
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 588 HDCLDVQSFVELVHSSNG 605
++ EL S
Sbjct: 817 KSATNLPQLKELYQLSKA 834
>gi|408440830|ref|NP_001025345.2| DNA ligase 3 [Danio rerio]
Length = 1011
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 141/493 (28%), Positives = 223/493 (45%), Gaps = 53/493 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E++ L RL+ ++ + L ++ KK ++K I ++ DLK+ K I
Sbjct: 371 LTIQEVDASLSRLSQLTKEDDQQAELQSIAKKCTGNDLKCYIRLVKHDLKINSGAKHILD 430
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR--------HKRQDIEVG--KAVRPQLAMRIG 233
P+A D F + +L V +++ RNQ+ K IE V+P LA
Sbjct: 431 AVDPNAYDAFKASRNLGDVIDRVL-RNQQDASNGTGPRKILSIEASLMTPVQPMLAEACK 489
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HKNG+ YFSRS L H + H I +
Sbjct: 490 SIEYAMKKCPNG-MYSEIKYDGERVQVHKNGNHFSYFSRSLKPVLPH-KVAHFKDFIPQA 547
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ DT ++ FG+ KAA D Q+ F FD +Y S
Sbjct: 548 FAGGHSMILDAEVLLIDTKTSKPLPFGTLGVHKKAA----FQDAQVGLFVFDCIYFNGVS 603
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L ER + L + VP+ L S ++ ++ +
Sbjct: 604 LMDKPLCERRKFLHDNM--------VEVPNRILFSEMKH---------VTRAPDLAEMIT 646
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRG 467
I EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G G
Sbjct: 647 RVIREGLEGLVLKDIKGLYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGKGSNG 704
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G ++ FL+ D R++ + + G D LD + L + + P + P
Sbjct: 705 GIMSSFLMGCY-----DPESRKWCTVTKCSGGFDDAMLDRLQKDLD-VIKIGKDPSKIPG 758
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKP 586
V N PD I P+K+ + IT +SE+ +A S+RFPR R+R DK
Sbjct: 759 WLKIVKNY---YPDFIIRDPQKAPVWEITG-AEFSKSEMHTADGISIRFPRCTRMRDDKD 814
Query: 587 WHDCLDVQSFVEL 599
W ++Q EL
Sbjct: 815 WKTATNLQQLKEL 827
>gi|15384023|gb|AAK96101.1|AF393466_39 ATP-dependent DNA ligase [uncultured crenarchaeote 74A4]
Length = 589
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 143/496 (28%), Positives = 227/496 (45%), Gaps = 63/496 (12%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S ++ KI +S+L+ N E +I+ I+L L+LG++E ++
Sbjct: 124 IARLEGSRSQDMKIKYISSLLNDANPLEATYILKILLGTLRLGVAENTVMDALAIAYSGN 183
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ-DIEVGKAVRPQLAMRIGDAHAAWRK 241
E E +NV+ DL V E + + + IE+ +RP LA R+ + K
Sbjct: 184 KENRKMLEHAYNVSSDLGKVAEIIAIEGIKGIEEFKIELFNPIRPMLADRVKSENEVIEK 243
Query: 242 LHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDG 301
+ G E IE K DG+R+QIH G +I FSRS S Y + + I + + IL+
Sbjct: 244 M-GNEFAIEYKLDGERVQIHIEGDKIELFSRSLEKISNYYPDIIEKIPKIFQAENAILEA 302
Query: 302 EMLVWDTSLNRFAEFGSNQEIAKAAR----DGLSSDRQLCYFAFDVLYVGDTSVIHQSLK 357
E++ + + F F QE+ R + + + FDVLY + S
Sbjct: 303 EIVAINENTGDFLPF---QELMHRRRKYKIEKAVKEYPITVNFFDVLYCNGKNCTELSYH 359
Query: 358 ERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRD 417
ER + L+ +VK ++ +P +A +E+E+FF+ +I
Sbjct: 360 ERRKKLENIVKENE--FAKYIP----------------MTIAKTENEIEEFFENSINAGS 401
Query: 418 EGIVLKDLGSKWEPGDRSGKWLKLKPEY-IRAGSDLDVLIIGGYYGSGRRGGEVAQFLVA 476
EG++LK L ++ G R WLKLK EY G LD+++IGG++G GRR G L+A
Sbjct: 402 EGLMLKMLDKPYQAGARGSHWLKLKREYRNELGDSLDLVVIGGFFGKGRRTGSYGTLLLA 461
Query: 477 LAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNS 536
++ DT+P S C+VGTG +DE LD + L P + P+ NS
Sbjct: 462 TYDQNT-DTFP----SICKVGTGFTDESLDQLYQILNPKITIKKNPRV----------NS 506
Query: 537 KERPDVWIESPEKSIILSITSDI------RTIRSEVFS-APYSLRFPRID-RVRYDKPWH 588
+ DVW E PE +I + S+I +T E+ +LRFP+ ++R +K
Sbjct: 507 EMEADVWFE-PE-LVIEVVASEITLSPIHKTAIXEIRKDTGLALRFPKFTGKIRVEKTVE 564
Query: 589 DCLDVQSFVELVHSSN 604
D + + L N
Sbjct: 565 DASTDEEVMSLYKGQN 580
>gi|403283359|ref|XP_003933090.1| PREDICTED: DNA ligase 3 isoform 2 [Saimiri boliviensis boliviensis]
Length = 954
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 233/497 (46%), Gaps = 53/497 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 431
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRH------KRQDIEVGKA----VRPQLAMRIG 233
P+A + F + +L+ V E++ RN++ +R+ + V + V+P LA
Sbjct: 432 ALDPNAYEAFKASRNLQDVVERVL-RNEQEVEKKPGQRRALSVQASLMTPVQPMLAEACK 490
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 491 SIEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVVHFKDYIPQA 548
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ D + FG+ KAA D +C F FD +Y D S
Sbjct: 549 FPGGQSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVS 604
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L ER + L + + +P+ + S ++ + + D + + +
Sbjct: 605 LMDRPLCERRKFLHENM--------VEIPNRIMFSEMKR-----VTKASDLADMITRVIR 651
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRG 467
E + EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +G
Sbjct: 652 EGL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 705
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G ++ FL+ D +++ + + G D L A + K + + P + P
Sbjct: 706 GMMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKI-P 758
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKP 586
S+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK
Sbjct: 759 SWLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKD 815
Query: 587 WHDCLDVQSFVELVHSS 603
W ++ EL S
Sbjct: 816 WKSATNLPQLKELYQLS 832
>gi|146302935|ref|YP_001190251.1| ATP-dependent DNA ligase [Metallosphaera sedula DSM 5348]
gi|172046897|sp|A4YD25.1|DNLI_METS5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|145701185|gb|ABP94327.1| DNA ligase I, ATP-dependent Dnl1 [Metallosphaera sedula DSM 5348]
Length = 598
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 134/511 (26%), Positives = 245/511 (47%), Gaps = 78/511 (15%)
Query: 121 SGGLTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGIS 177
+G L + E+ + L ++A+S +R KI + + LIKK E K+++ + L+LGI
Sbjct: 117 AGELDVMEVYNELVKIATSTGEGSRDIKIRIFAGLIKKATPIEAKYLVRFVEGRLRLGIG 176
Query: 178 EKSIFH----------EFHPDAEDLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVRP 226
+ ++ ++ P E +N+ DL + + ++ K G +RP
Sbjct: 177 DATVLDALAITFGGSADYRPIVERAYNLRADLGDIARVIATEGIEKLKNISPTPGIPIRP 236
Query: 227 QLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSK 286
LA R+ D K++GK +V + K+DG+R QIH+ G ++ FSR + ++ +++
Sbjct: 237 MLAERLPDPEEIMEKMNGKALV-DYKYDGERAQIHRKGDKVTIFSRRMENITDQYIDVTE 295
Query: 287 IIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCY----FAFD 342
++Q V D I++GE++ D F QE+ R ++ Y F FD
Sbjct: 296 YVKQFVKGDNFIVEGEIVPVDPESGEMRPF---QELMHRRRKNNIAEAIKEYPVNLFLFD 352
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
+++ + L ER L++++ S ++ + SH+ +A V
Sbjct: 353 LMFFEGEDYTTKPLPERRAKLEEIL-ASNDKVH-------IASHI----------IADRV 394
Query: 403 DEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGG 459
D++ ++F + I EG+++K +G S ++ G R W+KLK +Y +D +D++++G
Sbjct: 395 DKLREYFYQAISEGAEGVMVKSIGPDSIYQAGSRGWLWIKLKRDYQSEMADTVDLVVVGA 454
Query: 460 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
+YG G+RGG+ + L+A A P D F + C+V +G SD+ELD + K+ R+
Sbjct: 455 FYGKGKRGGKFSSLLMA-AYNPEKDV----FETVCKVASGFSDQELDEMQKKINELKREQ 509
Query: 520 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP--------- 570
++P+ S PDVW+ SP ++ +++ I +E+ +P
Sbjct: 510 KHPRVV----------SDMIPDVWV-SP------TLVAEV--IGAEITISPLHTCCRGEK 550
Query: 571 --YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
S+RFPR R R DK D Q +E+
Sbjct: 551 GGLSIRFPRFIRWRDDKSPEDATTNQEIMEM 581
>gi|402899337|ref|XP_003912656.1| PREDICTED: DNA ligase 3 [Papio anubis]
Length = 1009
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 229/496 (46%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 372 LTIQEVDEFLLRLSRLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 431
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 432 ALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKS 491
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 492 IEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 549
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 550 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 605
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ + + D + + +E
Sbjct: 606 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMKRVTK-----ASDLADMITRVIRE 652
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 653 GL----EGLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 706
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L + +L + + P + PS
Sbjct: 707 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATLARLQNELD-MVKISKDPSKI-PS 759
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 760 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 816
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 817 KSATNLPQLKELYQLS 832
>gi|226478780|emb|CAX72885.1| ligase I, DNA, ATP-dependent [Schistosoma japonicum]
Length = 840
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 154/602 (25%), Positives = 257/602 (42%), Gaps = 121/602 (20%)
Query: 108 VAAEVLQRRQGMISGG--LTIKELNDLLDRLAS-SENRAE--KISVLSTLIKKTNAQEMK 162
V AE ++ RQ ++S LTI + L +AS S N A+ K+ ++ +L+ E K
Sbjct: 268 VVAETIRSRQKILSAPKPLTISLVFSKLKNIASMSGNSAQNKKLEIVRSLLVACRESETK 327
Query: 163 WIIMIILKDLKLGISEKSIFHE---------FHPDAED--------------------LF 193
++I + L++G++E+++ FH A+D L
Sbjct: 328 YLIRSLSGKLRIGLAEQTVLTALGQAVAMTPFHFKADDESPRIVDASNGISSEQWKTVLD 387
Query: 194 NVTCDLK-----------LVCEKLKDRNQRHKRQ-DIEVGKAVRPQLAMRIGDAHAAWRK 241
++K L+ L D ++ ++ I G ++P LA ++
Sbjct: 388 TAVANVKRAYCVCPDYSRLIKSLLTDSHEALEQMCTITPGIPLKPMLASPTHGISEILKR 447
Query: 242 LHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHSE-----YGHAMSKIIEQNVLV 294
+ E K+DG+R QIH +G+ H +SR+ D++ + MS+++ ++ L
Sbjct: 448 FEECDFTCEYKYDGERAQIHILPSGAS-HVYSRNQEDNTTKYPDIVNNLMSRVLPESKLT 506
Query: 295 DR----------------------------CILDGEMLVWDTSLNRFAEFGSNQEIAKAA 326
CI+D E++ WD F +
Sbjct: 507 PHAVELLSEIVKNSKKQDQSIGVIGNKLVSCIIDSEVVAWDRVAGHILPFQILSTRKRKD 566
Query: 327 RDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSH 386
D + Q+C + FD+L++ S+I Q+L+ R E+L++V G
Sbjct: 567 VDESTVKVQICVYVFDILFINGVSLIEQTLRIRREILREVFPRIFGEFMIAT-------- 618
Query: 387 VRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPE 444
SL + ++DE+ F E I+ EG+++K L S +E RS WLKLK +
Sbjct: 619 ---------SLDSSDIDEIATFLDEAIKGNCEGLMIKTLDHNSTYEIAKRSHSWLKLKKD 669
Query: 445 YIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDE 503
Y+ G LD+++IGG++G+G+R G +L+A + P+T + + C++GTG+ D+
Sbjct: 670 YLEGVGDTLDLVVIGGFHGTGKRAGRYGGYLLACYD---PET--EEYQTICKIGTGMKDD 724
Query: 504 ELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDI 559
+L YF+ + K P +YQ T S PD W E + K+ LSI+
Sbjct: 725 DL----ASFSEYFKSHAVDKAKP--YYQYT--SSLIPDQWFEPVQVWEVKAADLSISPAH 776
Query: 560 RTIRSEVFSAP-YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGT-TQKGKEYGGLQ 617
+ V SLRFPR R+R DK D + EL S Q G YGG
Sbjct: 777 KAAAGLVDPLKGVSLRFPRFIRIRDDKKPEDATTAKQVYELYQSQEQIKNQHGNAYGGND 836
Query: 618 DD 619
DD
Sbjct: 837 DD 838
>gi|63054532|ref|NP_593318.2| ATP-dependent DNA ligase Cdc17 [Schizosaccharomyces pombe 972h-]
gi|118774|sp|P12000.1|DNLI1_SCHPO RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|4925|emb|CAA28754.1| DNA ligase [Schizosaccharomyces pombe]
gi|159883924|emb|CAB08176.2| ATP-dependent DNA ligase Cdc17 [Schizosaccharomyces pombe]
Length = 768
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 153/561 (27%), Positives = 241/561 (42%), Gaps = 88/561 (15%)
Query: 103 GNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLAS-----SENRAEKISVLSTLIKKT 156
G+ +VA Q + M LTI L D L ++A S+NR KI V+ L+
Sbjct: 237 GDLGLVAQTSRQNQPTMFKPAALTIPFLFDSLKKIAQMSGNQSQNR--KIGVIKRLLSSC 294
Query: 157 NAQEMKWIIMIILKDLKLGISEKSIF-------HEFHPDAED--------------LFNV 195
E K++I + L+L ++EK+I ++H D L +V
Sbjct: 295 EGAEPKYLIRALEGKLRLQLAEKTILVALANATAQYHADKNGEKLSQQDRIEGEQILRDV 354
Query: 196 TCDLK---LVCEKLKDRNQRHKRQDIEV--GKAVRPQLAMRIGDAHAAWRKLHGKEVVIE 250
C L L+ L + R+ ++ G +P LA E
Sbjct: 355 YCQLPSYDLIVPHLIEHGLGTLRETCKLTPGIPTKPMLAKPTKQISEVLNTFDQAAFTCE 414
Query: 251 CKFDGDRIQIH-KNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVD--RCILDGEMLVWD 307
K+DG+R Q+H + + FSR+ + S +S + + D ILD E + WD
Sbjct: 415 YKYDGERAQVHFTEDGKFYVFSRNSENMSVRYPDISVSVSKWKKPDARSFILDCEAVGWD 474
Query: 308 TSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQ 364
N+ F Q++A R + + C FAFD+LY+ ++ L ER +LL
Sbjct: 475 RDENKILPF---QKLATRKRKDVKIGDIKVRACLFAFDILYLNGQPLLETPLNERRKLLY 531
Query: 365 KVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKD 424
+ +PS G D H + +++ +E+F +E++++ EG+++K
Sbjct: 532 SMFQPSTG-------DFTFAKHSDQK----------SIESIEEFLEESVKDSCEGLMVKM 574
Query: 425 L---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAER 480
L S +EP RS WLK+K +Y+ G LD+++IG YYG G+R FL+ +
Sbjct: 575 LEGPDSHYEPSKRSRHWLKVKKDYLSGVGDSLDLIVIGAYYGKGKRTSVYGAFLLGCYD- 633
Query: 481 PAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERP 540
PDT S C++GTG S+E L+ +LK + FY ++ +P
Sbjct: 634 --PDT--ETVQSICKLGTGFSEEHLETFYNQLK------DIVISKKKDFYAHSDVPAHQP 683
Query: 541 DVWIESPEKSIILSITSDIRTIRSEVFSAPY---------SLRFPRIDRVRYDKPWHDCL 591
DVW E K + + +D+ S V+ A SLRFPR R+R DK W D
Sbjct: 684 DVWFEP--KYLWEVLAADLSL--SPVYKAAIGYVQEDKGISLRFPRFIRIREDKSWEDAT 739
Query: 592 DVQSFVELVHSSNGTTQKGKE 612
+ E S +QK KE
Sbjct: 740 TSEQVSEFYRSQVAYSQKEKE 760
>gi|403283357|ref|XP_003933089.1| PREDICTED: DNA ligase 3 isoform 1 [Saimiri boliviensis boliviensis]
Length = 1013
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 137/497 (27%), Positives = 233/497 (46%), Gaps = 53/497 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 431
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRH------KRQDIEVGKA----VRPQLAMRIG 233
P+A + F + +L+ V E++ RN++ +R+ + V + V+P LA
Sbjct: 432 ALDPNAYEAFKASRNLQDVVERVL-RNEQEVEKKPGQRRALSVQASLMTPVQPMLAEACK 490
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 491 SIEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVVHFKDYIPQA 548
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ D + FG+ KAA D +C F FD +Y D S
Sbjct: 549 FPGGQSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVS 604
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L ER + L + + +P+ + S ++ + + D + + +
Sbjct: 605 LMDRPLCERRKFLHENM--------VEIPNRIMFSEMKRVTK-----ASDLADMITRVIR 651
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRG 467
E + EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +G
Sbjct: 652 EGL----EGLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 705
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G ++ FL+ D +++ + + G D L + +L + + P + P
Sbjct: 706 GMMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATLARLQKELD-MVKISKDPSKI-P 758
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKP 586
S+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK
Sbjct: 759 SWLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKD 815
Query: 587 WHDCLDVQSFVELVHSS 603
W ++ EL S
Sbjct: 816 WKSATNLPQLKELYQLS 832
>gi|40555999|ref|NP_955084.1| CNPV061 DNA ligase [Canarypox virus]
gi|40233824|gb|AAR83407.1| CNPV061 DNA ligase [Canarypox virus]
Length = 565
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 145/585 (24%), Positives = 249/585 (42%), Gaps = 85/585 (14%)
Query: 45 YFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAP---- 100
YF R + S+ RE SY K ++ N + D + S D ++ G +
Sbjct: 4 YFKDFRSLCLSVSRET-SYNAKTELIHNFIYDEYKKNTSSTDVYIIVKLLLPGVSKLIYN 62
Query: 101 --------------------------NAGNFPMVAAEVLQRRQGM---ISGGLTIKELND 131
+ G+ V L++ + L +++++
Sbjct: 63 VNDKQIIKFFSKILKFEVEEINKYVVDTGDVAYVIGSFLKKSTSVYYATQSTLKLQDIDC 122
Query: 132 LLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAED 191
L RL+ ++I +I K ++++II ++ DL++ I K + H A D
Sbjct: 123 FLTRLSKVTKEHDQIKEFKKIIPKCTPNDLRYIIRLVKHDLRMNIGPKHVLAALHEKAYD 182
Query: 192 LFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIEC 251
+F ++ DL+ V K + N + ++ + P LA A K G +++E
Sbjct: 183 IFKLSNDLEYVVNKSLEGNL---KPVVKPMIPIHPMLASICKTFSEAKEKCKGG-IIVEF 238
Query: 252 KFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVL----VDRCILDGEMLVWD 307
K+DG+RIQ+HK+G +FSRS + H +S E V + ILDGE+++ D
Sbjct: 239 KYDGERIQVHKDGDNFKFFSRSLKPVTP--HKISSFEELLVQAFPSANNMILDGEIILVD 296
Query: 308 TSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVV 367
N+ FG+ + + ++ +C+F FD LY D S+I + L R +++ +
Sbjct: 297 KETNKPLPFGT----LGINKKAMYNNACICFFIFDCLYFNDISLIDKPLSYRRDIISSNI 352
Query: 368 KPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGS 427
R+ L S VR E E+ + K + EG VLKD
Sbjct: 353 IEISNRV--------LLSEVRLIEED---------KELIRLLKIVLSKGIEGFVLKDEKG 395
Query: 428 KWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPD 484
+EPG R +WLK+K +Y+ GS D+L++G YYG G + G ++ FL+ + +
Sbjct: 396 VYEPGMR--RWLKIKKDYLDNGSMADKADLLVLGAYYGKGNKSGLLSSFLMGCYDEES-- 451
Query: 485 TYPRRFISFCRVGTGLSDEELDAV--VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDV 542
+++ + + G SD EL + ++P + K P + + N PDV
Sbjct: 452 ---KKWCTVTKCSGGHSDSELKEIQKSISIEP------FDKNNIPDWLCI--NKAHYPDV 500
Query: 543 WIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 587
I + E + + I T +A S+RFPR RVR DK +
Sbjct: 501 IITNVETAPVWEIAGAEFTTSPSHTAANISIRFPRCVRVREDKDF 545
>gi|440902828|gb|ELR53569.1| DNA ligase 3 [Bos grunniens mutus]
Length = 1002
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 137/497 (27%), Positives = 232/497 (46%), Gaps = 53/497 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 374 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 433
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRH------KRQDIEVGKA----VRPQLAMRIG 233
P+A + F + +L+ V E++ RN++ +R+ + V + V+P LA
Sbjct: 434 ALDPNAYEAFKASRNLQDVVERVL-RNEQEVEKEPGQRRALSVQASLMTPVQPMLAEACK 492
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HK G YFSRS L H + H I
Sbjct: 493 SIEYAMKKCPNG-MFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPH-KVAHFKDFIPRA 550
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ D + FG+ KAA D +C F FD +Y D S
Sbjct: 551 FPGGHSMILDSEVLLIDNRTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVS 606
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L ER +LL + +P+ + S ++ + + VD + + +
Sbjct: 607 LMDRPLCERRKLLHDNM--------VEIPNRIMFSEMKQ-----VTKASDLVDMINRVIQ 653
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRG 467
E + EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +G
Sbjct: 654 EGL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 707
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G ++ FL+ D +++ + + G D L + T+L + + P + P
Sbjct: 708 GMMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATLARLQTELD-MVKISKDPSKI-P 760
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKP 586
++ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R DK
Sbjct: 761 NWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKD 817
Query: 587 WHDCLDVQSFVELVHSS 603
W + EL S
Sbjct: 818 WKSATTLPQLKELYQLS 834
>gi|402470842|gb|EJW04879.1| DNA ligase I, ATP-dependent (dnl1) [Edhazardia aedis USNM 41457]
Length = 598
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 238/490 (48%), Gaps = 62/490 (12%)
Query: 125 TIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF-- 182
+K L ++ D + + + K + + +I K++ E K++I + +K G++ K++
Sbjct: 121 VLKNLREIADDIGAQSLKG-KTNKMLKMISKSSNLEAKYLIRLYEGRMKTGLAFKTVLIC 179
Query: 183 --------HEFHPDAEDLFNVTCDL--KLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRI 232
+ D + +N C + K++ +K ++ + IE G V+P LA
Sbjct: 180 LGLVFGNEKDLVDDVKYAYN-QCPIFEKIIIALIKFKSNILEHVKIEPGIPVKPMLAQPS 238
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLD----HSEYGHAMSKII 288
+ AA+ +++G++ V E K+DG+R QIHK ++ FSR+ D + + + ++KI
Sbjct: 239 KNLTAAFNRVNGEDFVCEFKYDGERAQIHKFDNKYMIFSRNSEDLTPKYPDLQNTITKIC 298
Query: 289 EQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLY 345
+ +LD E++ +D + +R F Q + R + + ++C +AFD L+
Sbjct: 299 RDD---GNFVLDCEIVAYDVTEDRILPF---QILTTRKRKDVKLEHIKVKVCIYAFDCLF 352
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
G+ S++ + LK R +++ G+ + + S+V + +E+
Sbjct: 353 FGEKSLLDEPLKSRKQVIANNFTEINGQFKLI-----------------DSVVCASSEEI 395
Query: 406 EKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSG 464
E F ++I EG+++K L S ++P RS W+KLK +Y+ +D LD+++IG YYG G
Sbjct: 396 ETIFNDSISKNCEGLMIKSLNSLYKPSMRSTSWVKLKKDYLDGMADSLDLVVIGAYYGKG 455
Query: 465 RRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 524
+R G +L+A ++ + C++GTG +DE L + K Y + ++
Sbjct: 456 KRTGAYGGYLLACYNEEED-----KYEAICKIGTGFNDETLAKIFNDFKEYV--VDNSEK 508
Query: 525 APPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSAPYSLRFPRID 579
P F Q++ N K PDVW+ P+ K+ S+ S I + + SLRFPR
Sbjct: 509 MPQDF-QISENIK--PDVWL-LPKFVWEVKAAGFSL-SPIYSAAKNLNKQGISLRFPRFI 563
Query: 580 RVRYDKPWHD 589
R R DK D
Sbjct: 564 RHRDDKEPKD 573
>gi|296202009|ref|XP_002748408.1| PREDICTED: DNA ligase 3 isoform 2 [Callithrix jacchus]
Length = 954
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 233/497 (46%), Gaps = 53/497 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 431
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRH------KRQDIEVGKA----VRPQLAMRIG 233
P+A + F + +L+ V E++ RN++ +R+ + V + V+P LA
Sbjct: 432 ALDPNAYEAFKASRNLQDVVERVL-RNEQEVEKKPGQRRALSVQASLMTPVQPMLAEACK 490
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 491 SIEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVVHFKDYIPQA 548
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ D + FG+ KAA D +C F FD +Y D S
Sbjct: 549 FPGGQSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVS 604
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L ER + L + + +P+ + S ++ + + D + + +
Sbjct: 605 LMDRPLCERRKFLHENM--------VEIPNRIMFSEMKR-----VTKASDLADMITRVIR 651
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRG 467
E + EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +G
Sbjct: 652 EGL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 705
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G ++ FL+ D +++ + + G D L A + K + + P + P
Sbjct: 706 GMMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKI-P 758
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKP 586
S+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK
Sbjct: 759 SWLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKD 815
Query: 587 WHDCLDVQSFVELVHSS 603
W ++ EL S
Sbjct: 816 WKSATNLPQLKELYQLS 832
>gi|346644723|ref|NP_001231032.1| DNA ligase 3 [Sus scrofa]
Length = 995
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 137/497 (27%), Positives = 231/497 (46%), Gaps = 53/497 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 372 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 431
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRH------KRQDIEVGKA----VRPQLAMRIG 233
P+A + F + +L+ V E++ RN++ +R+ + V + V+P LA
Sbjct: 432 ALDPNAYEAFKASRNLQDVVERVL-RNEQEVEKEPGQRRALSVQASLMTPVQPMLAEACK 490
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HK G YFSRS L H + H I +
Sbjct: 491 SIEYAMKKCPNG-MFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPH-KVAHFKDFIPQA 548
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ D + FG+ KAA D +C F FD +Y D S
Sbjct: 549 FPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVS 604
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L R + L + +P+ + S ++ S + VD + + +
Sbjct: 605 LMDRPLCGRRKFLHDNM--------VEIPNRIMFSEMKQ-----VSKASDLVDMINRVIR 651
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRG 467
E + EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +G
Sbjct: 652 EGL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 705
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G ++ FL+ D +++ + + G D L + T+L + + P + P
Sbjct: 706 GMMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATLARLQTELD-MVKISKDPSKI-P 758
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKP 586
+ ++ N PD + P+K+ + IT RSE +A S+RFPR R+R DK
Sbjct: 759 GWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRFPRCTRIRDDKD 815
Query: 587 WHDCLDVQSFVELVHSS 603
W ++ EL S
Sbjct: 816 WKSATNLPQLKELYQLS 832
>gi|296477017|tpg|DAA19132.1| TPA: DNA ligase (ATP) 3 [Bos taurus]
Length = 943
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 137/497 (27%), Positives = 232/497 (46%), Gaps = 53/497 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 374 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 433
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRH------KRQDIEVGKA----VRPQLAMRIG 233
P+A + F + +L+ V E++ RN++ +R+ + V + V+P LA
Sbjct: 434 ALDPNAYEAFKASRNLQDVVERVL-RNEQEVEKEPGQRRALSVQASLMTPVQPMLAEACK 492
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HK G YFSRS L H + H I
Sbjct: 493 SIEYAMKKCPNG-MFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPH-KVAHFKDFIPRA 550
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ D + FG+ KAA D +C F FD +Y D S
Sbjct: 551 FPGGHSMILDSEVLLIDNRTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVS 606
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L ER +LL + +P+ + S ++ + + VD + + +
Sbjct: 607 LMDRPLCERRKLLHDNM--------VEIPNRIMFSEMKQ-----VTKASDLVDMINRVIQ 653
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRG 467
E + EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +G
Sbjct: 654 EGL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 707
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G ++ FL+ D +++ + + G D L + T+L + + P + P
Sbjct: 708 GMMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATLARLQTELD-MVKISKDPSKI-P 760
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKP 586
++ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R DK
Sbjct: 761 NWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKD 817
Query: 587 WHDCLDVQSFVELVHSS 603
W + EL S
Sbjct: 818 WKSATTLPQLKELYQLS 834
>gi|84000185|ref|NP_001033196.1| DNA ligase 3 [Bos taurus]
gi|83406113|gb|AAI11208.1| Ligase III, DNA, ATP-dependent [Bos taurus]
Length = 943
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 137/497 (27%), Positives = 232/497 (46%), Gaps = 53/497 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 374 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 433
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRH------KRQDIEVGKA----VRPQLAMRIG 233
P+A + F + +L+ V E++ RN++ +R+ + V + V+P LA
Sbjct: 434 ALDPNAYEAFKASRNLQDVVERVL-RNEQEVEKEPGQRRALSVQASLMTPVQPMLAEACK 492
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HK G YFSRS L H + H I
Sbjct: 493 SIEYAMKKCPNG-MFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPH-KVAHFKDFIPRA 550
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ D + FG+ KAA D +C F FD +Y D S
Sbjct: 551 FPGGHSMILDSEVLLVDNRTGKPLPFGTLGVHKKAA----FQDANVCQFVFDCIYFNDVS 606
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L ER +LL + +P+ + S ++ + + VD + + +
Sbjct: 607 LMDRPLCERRKLLHDNM--------VEIPNRIMFSEMKQ-----VTKASDLVDMINRVIQ 653
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRG 467
E + EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +G
Sbjct: 654 EGL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 707
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G ++ FL+ D +++ + + G D L + T+L + + P + P
Sbjct: 708 GMMSIFLMGCY-----DPSSQKWCTVTKCAGGHDDATLARLQTELD-MVKISKDPSKI-P 760
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKP 586
++ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R DK
Sbjct: 761 NWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKD 817
Query: 587 WHDCLDVQSFVELVHSS 603
W + EL S
Sbjct: 818 WKSATTLPQLKELYQLS 834
>gi|354466767|ref|XP_003495844.1| PREDICTED: DNA ligase 3 isoform 1 [Cricetulus griseus]
Length = 942
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 226/497 (45%), Gaps = 54/497 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E++ L L+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 374 LTIQEVDAFLLHLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 433
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ--------DIEVGKAVRPQLAMRIGDA 235
P+A + F + +L+ V E++ Q K Q + V+P LA
Sbjct: 434 ALDPNAYEAFKASRNLQDVVERVLHNEQEVKYQGQRRTLSVQASLMTPVQPMLAEACKSI 493
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQNV 292
A +K + + E K+DG+R+Q+HK G YFSRS L H + H I +
Sbjct: 494 EYAMKK-YPNGMFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPH-KVAHFKDYIPKAFP 551
Query: 293 LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVI 352
ILD E+L+ D + + FG+ KAA D +C F FD +Y D S++
Sbjct: 552 GGQSMILDSEVLLIDNNTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSLM 607
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
+ L ER +LL + + R+ + S ++ + + D + + +E
Sbjct: 608 DRPLCERRKLLHDNMVEIQNRI--------MFSEMKQ-----VTKASDLADMINRVIREG 654
Query: 413 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGE 469
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 655 L----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGM 708
Query: 470 VAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP--P 527
++ FL+ + PD+ ++ C G DA + +L+ + K P
Sbjct: 709 MSIFLMGCYD---PDSQKWCTVTKCAGGHD------DATLARLQKELDMVKISKDPSKIP 759
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKP 586
S+ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R DK
Sbjct: 760 SWLKI--NKIYYPDFIVSDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKD 816
Query: 587 WHDCLDVQSFVELVHSS 603
W ++ EL S
Sbjct: 817 WKSATNLPQLKELYQLS 833
>gi|300508449|pdb|3L2P|A Chain A, Human Dna Ligase Iii Recognizes Dna Ends By Dynamic
Switching Between Two Dna Bound States
Length = 579
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 224/496 (45%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 118 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 177
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 178 ALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTPVQPMLAEACKS 237
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 238 VEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 295
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 296 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 351
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ V +D +
Sbjct: 352 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMK--------RVTKALD-LADMITR 394
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
I+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 395 VIQEGLEGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 452
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D +++ + + G D L + +L K PS
Sbjct: 453 MMSIFLMGCY-----DPGSQKWCTVTKCAGGHDDATLARLQNELD--MVKISKDPSKIPS 505
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ +V N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 506 WLKV--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDW 562
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 563 KSATNLPQLKELYQLS 578
>gi|190405162|gb|EDV08429.1| DNA ligase [Saccharomyces cerevisiae RM11-1a]
Length = 755
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 138/524 (26%), Positives = 229/524 (43%), Gaps = 84/524 (16%)
Query: 124 LTIKELNDLLDRLASSENR---AEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ E+ L +A ++ + +K+ ++ ++ E K++I + L++G++EK+
Sbjct: 259 LTVGEVFKNLRAIAKTQGKDSQLKKMKLIKRMLTACKGIEAKFLIRSLESKLRIGLAEKT 318
Query: 181 IF-------------HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEV------- 220
+ E PD + +V L+ +K++D + +I +
Sbjct: 319 VLISLSKALLLHDENREDSPDKDVPMDV---LESAQQKIRDAFCQVPNYEIVINSCLEHG 375
Query: 221 ------------GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEI 267
G ++P LA + + G+ E K+DG+R Q+H N +
Sbjct: 376 IMNLDKYCTLRPGIPLKPMLAKPTKAINEVLDRFQGETFTSEYKYDGERAQVHLLNDGTM 435
Query: 268 HYFSRSFLDHSE-YGHA-MSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA 325
+SR+ + +E Y ++ I+ ILD E + WD + F Q ++
Sbjct: 436 RIYSRNGENMTERYPEINITDFIQDLDTTKNLILDCEAVAWDKDQGKILPF---QVLSTR 492
Query: 326 ARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
R + + ++C FAFD+L D +I++SLKER E L KV K G +
Sbjct: 493 KRKDVELNDVKVKVCLFAFDILCYNDERLINKSLKERREYLTKVTKVVPGEFQYAT---- 548
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWL 439
+ +N+DE++KF E++ + EG+++K L S +EP RS WL
Sbjct: 549 -------------QITTNNLDELQKFLDESVNHSCEGLMVKMLEGPESHYEPSKRSRNWL 595
Query: 440 KLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
KLK +Y+ G LD+ ++G YYG G+R G FL+ + + F + C++GT
Sbjct: 596 KLKKDYLEGVGDSLDLCVLGAYYGRGKRTGTYGGFLLGCYNQDTGE-----FETCCKIGT 650
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI--- 555
G SDE L + +L P + PK +S PDVW E +L+
Sbjct: 651 GFSDEMLQLLHDRLTPTI--IDGPKAT------FVFDSSAEPDVWFEPTTLFEVLTADLS 702
Query: 556 TSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
S I S F SLRFPR R+R DK D + VEL
Sbjct: 703 LSPIYKAGSATFDKGVSLRFPRFLRIREDKGVEDATSSEQIVEL 746
>gi|261329005|emb|CBH11983.1| DNA ligase I, putative [Trypanosoma brucei gambiense DAL972]
Length = 746
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 197/427 (46%), Gaps = 51/427 (11%)
Query: 199 LKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRI 258
L+++ + N + + G V+PQLA + +GK E K+DG+R
Sbjct: 351 LEVIVPTSAEANMHARALSVRPGIPVKPQLAHPTSGVSVILDRFNGKAFTSEYKYDGERA 410
Query: 259 QIH-KNGSEIHYFSR-SFLDHSEYGHAMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFA 314
QIH GS + FSR S + S+Y +S + E + VD I+D E++ D
Sbjct: 411 QIHYTRGSGVQIFSRNSETNTSKYPDIISMLPEAFSVDTVDSFIIDAEVVAVDKVTGALQ 470
Query: 315 EFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSK 371
F Q + R +S D +C FAFD+LY + ++L +R E+L KP
Sbjct: 471 AF---QVLQHRGRKNVSFDNVKVPVCVFAFDILYFNGEPQMSKTLSQRREVLHTHFKPVS 527
Query: 372 GRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKW 429
+ L +++VD+++ F I + EG+++K L S +
Sbjct: 528 TKFRF-----------------AEYLDSNDVDDIQAFLDRAIRDGTEGLMVKTLEEESTY 570
Query: 430 EPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPR 488
P RS WLKLK +Y+ +D LD++ IG YYG G+R G FL+A D
Sbjct: 571 VPAKRSHYWLKLKKDYMDGVTDTLDLVPIGAYYGKGKRTGVFGGFLLACY-----DGEGD 625
Query: 489 RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE 548
+ S C++GTG D++L+A+ L+P + P +Y+ ++++PDVW ++ +
Sbjct: 626 EYQSICKIGTGFQDDQLEAITKSLQPSILDEQ------PRYYR----TEDKPDVWFQASQ 675
Query: 549 ----KSIILSITSDIRTIRSEV-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSS 603
K+ LSI+ V S +LRFPR RVR DK H+ E+ H+
Sbjct: 676 VWEVKAADLSISPAHFAAYGLVDASKGIALRFPRFIRVREDKKVHEATSAAQVAEMYHNQ 735
Query: 604 NGTTQKG 610
+ Q+G
Sbjct: 736 S-LAQRG 741
>gi|354466771|ref|XP_003495846.1| PREDICTED: DNA ligase 3 isoform 3 [Cricetulus griseus]
Length = 955
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 136/495 (27%), Positives = 229/495 (46%), Gaps = 50/495 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E++ L L+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 374 LTIQEVDAFLLHLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 433
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ--------DIEVGKAVRPQLAMRIGDA 235
P+A + F + +L+ V E++ Q K Q + V+P LA
Sbjct: 434 ALDPNAYEAFKASRNLQDVVERVLHNEQEVKYQGQRRTLSVQASLMTPVQPMLAEACKSI 493
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQNV 292
A +K + + E K+DG+R+Q+HK G YFSRS L H + H I +
Sbjct: 494 EYAMKK-YPNGMFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPH-KVAHFKDYIPKAFP 551
Query: 293 LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVI 352
ILD E+L+ D + + FG+ KAA D +C F FD +Y D S++
Sbjct: 552 GGQSMILDSEVLLIDNNTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSLM 607
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
+ L ER +LL + + R+ + S ++ + + D + + +E
Sbjct: 608 DRPLCERRKLLHDNMVEIQNRI--------MFSEMKQ-----VTKASDLADMINRVIREG 654
Query: 413 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGE 469
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 655 L----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGM 708
Query: 470 VAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSF 529
++ FL+ + PD+ +++ + + G D L A + K + + P + PS+
Sbjct: 709 MSIFLMGCYD---PDS--QKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKI-PSW 761
Query: 530 YQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPWH 588
++ N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 762 LKI--NKIYYPDFIVSDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDWK 818
Query: 589 DCLDVQSFVELVHSS 603
++ EL S
Sbjct: 819 SATNLPQLKELYQLS 833
>gi|260841228|ref|XP_002613830.1| hypothetical protein BRAFLDRAFT_119901 [Branchiostoma floridae]
gi|229299220|gb|EEN69839.1| hypothetical protein BRAFLDRAFT_119901 [Branchiostoma floridae]
Length = 928
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 231/496 (46%), Gaps = 47/496 (9%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L+ LA +++ L+ + KK A ++K ++ +I DL++ K I
Sbjct: 285 LTIQEVDESLEILAQMTKEDDQMRELNKIAKKCTANDLKVVVRLIKHDLRINAGAKHILE 344
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRN-----QRHKRQDIEVGKAVRPQLAMRIGDAHAA 238
P+A F + +L V E++ ++ + V P LA A
Sbjct: 345 GLDPNAYPAFQASRNLADVVERVVANGCAPGMKKSLSIKANLMTPVLPMLAEACKSVEMA 404
Query: 239 WRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVD 295
RK + E K+DG+R+Q+HK G++ YFSRS L H + H I +
Sbjct: 405 MRKCPNG-MYAEIKYDGERVQVHKQGNKFEYFSRSLKPVLPH-KVAHFKDYIPKAFPHGS 462
Query: 296 RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQS 355
ILD E+L+ DT+ FG+ I K + SD Q+ F FD +Y +++ +
Sbjct: 463 NMILDSEVLLVDTNTGNPLPFGT-LGIHKKQQ---FSDAQVALFVFDCIYFNGETLMDRP 518
Query: 356 LKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN 415
+ ER + L+ + T++P+ + S R EP ++ I +
Sbjct: 519 ISERRKFLEDNM--------TVIPNRVVLSEYRYITEP---------GDLSDMIGRVIRD 561
Query: 416 RDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQ 472
EG+VLKD S +EPG R WLK+K +Y+ G+ D++++G +YG+G +GG +
Sbjct: 562 GLEGLVLKDTKSIYEPGKRH--WLKVKKDYLEQGAMADTADLVVLGAFYGTGNKGGLKSV 619
Query: 473 FLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV 532
FL+ + + PD+ ++ + + G G D + + +L K P + ++
Sbjct: 620 FLMGVYD---PDS--DKWCTVTKCGNGHDDNTIAKLNKELA--MVKISKDMSKVPKWLKI 672
Query: 533 TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPWHDCL 591
T N PD P+K+ + IT +SE +A S+RFPR+ ++R DK W
Sbjct: 673 TKNL--VPDFVCADPKKAPVWEITG-AEFSKSEAHTADGISIRFPRVTKIRDDKDWKSAT 729
Query: 592 DVQSFVELVHSSNGTT 607
+++ L +S T+
Sbjct: 730 NLKQLKHLFKTSKETS 745
>gi|354466769|ref|XP_003495845.1| PREDICTED: DNA ligase 3 isoform 2 [Cricetulus griseus]
gi|344238283|gb|EGV94386.1| DNA ligase 3 [Cricetulus griseus]
Length = 1014
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 136/495 (27%), Positives = 229/495 (46%), Gaps = 50/495 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E++ L L+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 374 LTIQEVDAFLLHLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 433
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ--------DIEVGKAVRPQLAMRIGDA 235
P+A + F + +L+ V E++ Q K Q + V+P LA
Sbjct: 434 ALDPNAYEAFKASRNLQDVVERVLHNEQEVKYQGQRRTLSVQASLMTPVQPMLAEACKSI 493
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQNV 292
A +K + + E K+DG+R+Q+HK G YFSRS L H + H I +
Sbjct: 494 EYAMKK-YPNGMFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPH-KVAHFKDYIPKAFP 551
Query: 293 LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVI 352
ILD E+L+ D + + FG+ KAA D +C F FD +Y D S++
Sbjct: 552 GGQSMILDSEVLLIDNNTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSLM 607
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
+ L ER +LL + + R+ + S ++ + + D + + +E
Sbjct: 608 DRPLCERRKLLHDNMVEIQNRI--------MFSEMKQVTK-----ASDLADMINRVIREG 654
Query: 413 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGE 469
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 655 L----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGM 708
Query: 470 VAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSF 529
++ FL+ + PD+ +++ + + G D L A + K + + P + PS+
Sbjct: 709 MSIFLMGCYD---PDS--QKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKI-PSW 761
Query: 530 YQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPWH 588
++ N PD + P+K+ + IT +SE +A S+RFPR R+R DK W
Sbjct: 762 LKI--NKIYYPDFIVSDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKDWK 818
Query: 589 DCLDVQSFVELVHSS 603
++ EL S
Sbjct: 819 SATNLPQLKELYQLS 833
>gi|410980490|ref|XP_003996610.1| PREDICTED: DNA ligase 3 isoform 1 [Felis catus]
Length = 996
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 140/499 (28%), Positives = 229/499 (45%), Gaps = 57/499 (11%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E++ L L+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 373 LTIQEVDAFLLCLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 432
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRH------KRQDIEVGKA----VRPQLAMRIG 233
P+A + F + +L+ V E++ RN++ +R+ + V + V+P LA
Sbjct: 433 ALDPNAYEAFKASRNLQDVVERVL-RNEQEVEKEPGRRRALSVQASLMTPVQPMLAEACK 491
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 492 SIEHAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQA 549
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ DT + FG+ KAA D +C F FD +Y D S
Sbjct: 550 FPGGHSMILDSEVLLIDTKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDIS 605
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L ER + L + +P+ + S ++ + + D + + +
Sbjct: 606 LMDRPLCERRKFLHDNM--------VEIPNRIMFSEMKQVTK-----ASDLADMINRVIR 652
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRG 467
E + EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +G
Sbjct: 653 EGL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 706
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP- 526
G ++ FL+ Y +C V T S DA + +L+ + K
Sbjct: 707 GMMSIFLMG--------CYDPGSQKWCTV-TKCSGGHDDATLARLQKELDMVKISKDPSK 757
Query: 527 -PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYD 584
PS+ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R D
Sbjct: 758 IPSWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDD 814
Query: 585 KPWHDCLDVQSFVELVHSS 603
K W D+ EL S
Sbjct: 815 KDWKSATDLPKLKELYQLS 833
>gi|410980494|ref|XP_003996612.1| PREDICTED: DNA ligase 3 isoform 3 [Felis catus]
Length = 1022
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 137/497 (27%), Positives = 231/497 (46%), Gaps = 53/497 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E++ L L+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 380 LTIQEVDAFLLCLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 439
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRH------KRQDIEVGKA----VRPQLAMRIG 233
P+A + F + +L+ V E++ RN++ +R+ + V + V+P LA
Sbjct: 440 ALDPNAYEAFKASRNLQDVVERVL-RNEQEVEKEPGRRRALSVQASLMTPVQPMLAEACK 498
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 499 SIEHAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQA 556
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ DT + FG+ KAA D +C F FD +Y D S
Sbjct: 557 FPGGHSMILDSEVLLIDTKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDIS 612
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L ER + L + +P+ + S ++ + + D + + +
Sbjct: 613 LMDRPLCERRKFLHDNM--------VEIPNRIMFSEMKQVTK-----ASDLADMINRVIR 659
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRG 467
E + EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +G
Sbjct: 660 EGL----EGLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 713
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G ++ FL+ D +++ + + G D L + +L + + P + P
Sbjct: 714 GMMSIFLMGCY-----DPGSQKWCTVTKCSGGHDDATLARLQKELD-MVKISKDPSKI-P 766
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKP 586
S+ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R DK
Sbjct: 767 SWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKD 823
Query: 587 WHDCLDVQSFVELVHSS 603
W D+ EL S
Sbjct: 824 WKSATDLPKLKELYQLS 840
>gi|320100861|ref|YP_004176453.1| ATP-dependent DNA ligase I [Desulfurococcus mucosus DSM 2162]
gi|319753213|gb|ADV64971.1| DNA ligase I, ATP-dependent Dnl1 [Desulfurococcus mucosus DSM 2162]
Length = 610
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 152/573 (26%), Positives = 261/573 (45%), Gaps = 84/573 (14%)
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISG- 122
G+ E +L + A G+++ S + G + + G+ A ++ + G G
Sbjct: 67 GVGEKLLVKAIALATGVTEASVE----------GLSKSLGDLGKAAEQLKSKSTGRSQGV 116
Query: 123 ----------GLTIKELNDLLDRLASSENRAEK---ISVLSTLIKKTNAQEMKWIIMIIL 169
LT+ + + L R+A ++ K I +L+ L+K+ + +E K+I+ +
Sbjct: 117 TLLSYTQQRTELTVNRVYETLVRVAMAQGEGSKDIKIRLLAGLLKEASPKEAKFIVRFVE 176
Query: 170 KDLKLGISEKSIFHEF----------HPDAEDLFNVTCDLKLVCEKLKDRN-QRHKRQDI 218
L++GI E +I P E +N+ DL V + L + + K
Sbjct: 177 GRLRVGIGEATIMDALATIYGGGVAARPLIERAYNLRADLGEVAKILASKGLEAVKEVRP 236
Query: 219 EVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS 278
EVG +RP LA R+ D K+ G + IE K+DG+R QIHK G ++ FSR + +
Sbjct: 237 EVGTPIRPMLAERLSDPGEILEKVGG-DAFIEYKYDGERAQIHKKGDKVWIFSRRLENIT 295
Query: 279 EYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR--DGLSSDRQ- 335
+ + ++ ++ D I++GE++ +D F QE+ R D S+ ++
Sbjct: 296 QQYPDVVELARNHLKADEAIVEGEIVAYDPETGELKPF---QELMHRKRKHDIHSAIKEY 352
Query: 336 -LCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPC 394
+ F FD+LY+ ++L R L++VV V + + ++R
Sbjct: 353 PVKVFLFDLLYLNGHDYTVETLPVRRSKLEEVVDK--------VEEFTIAEYIR------ 398
Query: 395 WSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD- 451
+ VDE+EKFF + I EG+++K L S ++ G R W+K K +Y D
Sbjct: 399 ----TNKVDELEKFFLKAISEGAEGVMVKALHGDSIYQAGTRGWLWIKFKRDYRSEMVDT 454
Query: 452 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 511
+D++++G ++G GRRGG+ L+A A + F + C+VG+G DE+LD +
Sbjct: 455 VDLVVVGAFHGKGRRGGKYGALLMA-----AYNDEKDVFETVCKVGSGFKDEDLDKLPEI 509
Query: 512 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS--- 568
LKPY R +P+ V N + PDVW+E + I+ + + + +
Sbjct: 510 LKPYMRDRRHPR--------VVANME--PDVWVEPALVAEIIGAELTLSPVHTCAYGKVK 559
Query: 569 --APYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
A S+RFPR R R DK D VE+
Sbjct: 560 SDAGISIRFPRFIRWRPDKSPEDATTSNELVEM 592
>gi|242008936|ref|XP_002425250.1| DNA ligase, putative [Pediculus humanus corporis]
gi|212508998|gb|EEB12512.1| DNA ligase, putative [Pediculus humanus corporis]
Length = 927
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 162/624 (25%), Positives = 272/624 (43%), Gaps = 77/624 (12%)
Query: 11 VLVSLFN---WIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILP-SLDRERGSYGLK 66
+ V L N ++ KTK A F K D DY RL+LP ++ R Y L+
Sbjct: 149 ICVDLANDSSYLTKTKIVA---DFFNKGSDGESFKSDYELWCRLLLPGAVIR---VYNLQ 202
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTI 126
L LG+ D+ L + KG A +F + ++ + + LT+
Sbjct: 203 SKQLIKLFSKILGVDHDAM----LEDLEKGDVAETISSFFKTSTKIKEANKST----LTL 254
Query: 127 KELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFH 186
+E+++ L++L+ E+ + KK A ++K II +I DL++ K I H
Sbjct: 255 QEVDEFLEKLSKMTKEDEQNYHFKGITKKCTANDLKMIIRLIKHDLRINAGPKHILEALH 314
Query: 187 PDAEDLFNVTCDLK-LVCEKLKDRN----------QRHKRQDIEVG--KAVRPQLAMRIG 233
DA F + D+K +V +K R K DI + V P LA
Sbjct: 315 KDAYKAFQTSRDIKSVVYNAIKAREKNNNKKNEKLNSEKGMDISINMMTPVLPMLAQPCK 374
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A K + E K+DG+R+Q+HK G YFSRS L H + H I +
Sbjct: 375 SVEMALEKCPNG-MFSEIKYDGERVQLHKLGDTFKYFSRSLKPVLAH-KVSHFKEYIPQA 432
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ D + + FG+ + + +C F FD +Y S
Sbjct: 433 FPYGKDLILDAEILMVDNNTGKPLPFGT----LGIHKKSEFKNANVCLFVFDCMYYNGQS 488
Query: 351 VIHQSLKERHELL-QKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE-VEKF 408
++ L ER +L Q +V+ + +H + S + A +++E + K
Sbjct: 489 LLTTCLSERKSILRQNMVE---------INNHIMFSEMEEINR------AEDLEEMITKV 533
Query: 409 FKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGR 465
FK+ + EG+VLKD S +EPG R WLK+K +Y+ G+ D++++G ++G+G
Sbjct: 534 FKQGL----EGLVLKDKKSVYEPGKRH--WLKVKKDYLCDGAMADSADLVVLGAWFGTGH 587
Query: 466 RGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA 525
+GG ++ FL+ D +++++ +V +G ++ LD + +L + + P +
Sbjct: 588 KGGIMSSFLMGCY-----DAKSKKWVTVTKVSSGHDEQTLDRIQKEL-SVVKISKDPSKV 641
Query: 526 PPSFYQVTNNSKER-PDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYD 584
P N +K PD P+K + IT T + S+RFPR+ ++R D
Sbjct: 642 P----NWLNCTKTMIPDFVANDPKKMPVWEITGAEFTCNQVHTANGISIRFPRVTKIRSD 697
Query: 585 KPWHDCLDVQSFVELVHSSNGTTQ 608
K W ++ +L S T+
Sbjct: 698 KDWASATNLSELKKLFKKSKDTSN 721
>gi|410980492|ref|XP_003996611.1| PREDICTED: DNA ligase 3 isoform 2 [Felis catus]
Length = 1015
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 137/497 (27%), Positives = 231/497 (46%), Gaps = 53/497 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E++ L L+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 373 LTIQEVDAFLLCLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 432
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRH------KRQDIEVGKA----VRPQLAMRIG 233
P+A + F + +L+ V E++ RN++ +R+ + V + V+P LA
Sbjct: 433 ALDPNAYEAFKASRNLQDVVERVL-RNEQEVEKEPGRRRALSVQASLMTPVQPMLAEACK 491
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 492 SIEHAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQA 549
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ DT + FG+ KAA D +C F FD +Y D S
Sbjct: 550 FPGGHSMILDSEVLLIDTKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDIS 605
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L ER + L + +P+ + S ++ + + D + + +
Sbjct: 606 LMDRPLCERRKFLHDNM--------VEIPNRIMFSEMKQVTK-----ASDLADMINRVIR 652
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRG 467
E + EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +G
Sbjct: 653 EGL----EGLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 706
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G ++ FL+ D +++ + + G D L + +L + + P + P
Sbjct: 707 GMMSIFLMGCY-----DPGSQKWCTVTKCSGGHDDATLARLQKELD-MVKISKDPSKI-P 759
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKP 586
S+ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R DK
Sbjct: 760 SWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRDDKD 816
Query: 587 WHDCLDVQSFVELVHSS 603
W D+ EL S
Sbjct: 817 WKSATDLPKLKELYQLS 833
>gi|238880520|gb|EEQ44158.1| DNA ligase I, mitochondrial precursor [Candida albicans WO-1]
Length = 772
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 138/495 (27%), Positives = 228/495 (46%), Gaps = 76/495 (15%)
Query: 140 ENRAEKISVLSTLIK--KTNAQEMKWIIMIILKDLKLGISEKSI---FHEFHPDAEDLFN 194
E++++KIS++ ++ K + E K++I + L++G +EKSI + + E+ N
Sbjct: 292 ESQSKKISIIKQMLTACKMKSSEAKFLIRSLQGKLRIGSAEKSIIVGLAQAFVNYENKSN 351
Query: 195 VTCDLKLVCEK---LKDRNQRHKRQDIEV-------------------GKAVRPQLAMRI 232
D + E +K+ R ++ + G ++P LA
Sbjct: 352 KKIDPSKLAEAEEIMKEAFSRVPNYEVVLKTAYQYGIFNLLEHCFVTPGIPLKPMLANPT 411
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHSEYGHAMSKIIEQ 290
+ +E E K+DG R Q+H +GS I FSR+ D ++ + I +Q
Sbjct: 412 KSIGEVLDRFQNEEFTCEYKYDGVRAQVHILSDGS-IKVFSRNLEDMTQTYPDLISIGKQ 470
Query: 291 NVLVDRCI---LDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVL 344
+ I LD E + WD ++ F Q++ R ++ + Q+C FAFD+L
Sbjct: 471 FAVGGNAISMILDCEAVAWDREDHKILPF---QKLTTRKRKDVNEEDIKVQICLFAFDLL 527
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
Y + S++ +SL ER +++Q+ + P + R + + + N++
Sbjct: 528 YYDNESLLPKSLAERRKIMQENLSPIEDRFQFATATNS----------------SSNLEV 571
Query: 405 VEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 460
+++F ++I++ EG+++K L S +EP RS WLKLK +Y+ G LD+++IG Y
Sbjct: 572 LQQFLDQSIKDSCEGLMVKMLNGSESFYEPSKRSRNWLKLKKDYLEGVGDSLDLVVIGAY 631
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
G G+R G FL+A + D + C++GTG SDE+L + KL P
Sbjct: 632 NGKGKRTGTYGGFLLASYNEDSGD-----LETCCKIGTGFSDEDLLNLYNKLHP------ 680
Query: 521 YPKRAPPSFYQV--TNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSAPYSLRF 575
+ A P Y V TNNS PDVW E +L+ S I + F SLRF
Sbjct: 681 -TEIASPKNYFVYDTNNSNAVPDVWFEPSMLFEVLTADLSLSPIYKTGHQEFGKGVSLRF 739
Query: 576 PRIDRVRYDKPWHDC 590
PR RVR DK D
Sbjct: 740 PRFIRVRDDKGIEDA 754
>gi|338711026|ref|XP_001501551.3| PREDICTED: DNA ligase 3 [Equus caballus]
Length = 965
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 138/499 (27%), Positives = 230/499 (46%), Gaps = 57/499 (11%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L +L+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 383 LTIQEVDEFLLQLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 442
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRH------KRQDIEVGKA----VRPQLAMRIG 233
P+A + F + +L+ V E++ RN++ +R+ + V + V+P LA
Sbjct: 443 ALDPNAYEAFKASRNLQDVVERVL-RNEQEVEKEPGQRRALSVQASLMTPVQPMLAEACK 501
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 502 SIEYAMKKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQA 559
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ D + FG+ KAA D +C F FD +Y + S
Sbjct: 560 FPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNEVS 615
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L ER + L + +P+ + S ++ + A D + + +
Sbjct: 616 LMDRPLCERRKFLHDNM--------VEIPNRIMFSEMKR-----VTKAADLADMINRVIR 662
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRG 467
E + EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +G
Sbjct: 663 EGL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKG 716
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP- 526
G ++ FL+ Y +C V T S DA + +L+ + K
Sbjct: 717 GMMSIFLMG--------CYDPSSQKWCTV-TKCSGGHDDATLARLQKELDMVKISKDPSK 767
Query: 527 -PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYD 584
PS+ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R D
Sbjct: 768 IPSWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRED 824
Query: 585 KPWHDCLDVQSFVELVHSS 603
K W ++ EL S
Sbjct: 825 KDWKSATNLPQLKELYQLS 843
>gi|294654642|ref|XP_456702.2| DEHA2A08602p [Debaryomyces hansenii CBS767]
gi|199429037|emb|CAG84658.2| DEHA2A08602p [Debaryomyces hansenii CBS767]
Length = 749
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 192/402 (47%), Gaps = 58/402 (14%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHSE 279
G ++P LA + G+E E K+DG+R Q+H E+ +SR+ D S+
Sbjct: 376 GIPLKPMLAKPTKSVSEILDRFQGEEFTCEYKYDGERAQVHLLPTGEVRIYSRNSEDMSQ 435
Query: 280 YGHAMSKIIEQNVLVDRC------ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD 333
+ II+ + +LD E + WD N+ F Q ++ R +
Sbjct: 436 RYPDLISIIKDFLKTQEISGKHSMVLDCEAVAWDRETNKILPF---QVLSTRKRKDVEEK 492
Query: 334 R---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQ 390
+C FAFD+LY D +I SL ER +++ + ++P +G+ + +
Sbjct: 493 DIKVHICLFAFDLLYYNDKPLITTSLAERRKVMFENLRPIEGKFQFATFKN--------- 543
Query: 391 GEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIR 447
N+DE++ F +++++ EG+++K + S +EP RS WLKLK +Y+
Sbjct: 544 --------TTNLDELQHFLDQSVKDSCEGLMVKMMNGTDSYYEPSKRSRNWLKLKKDYLA 595
Query: 448 A-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 506
G LD+++IG Y G G+R G FL+A + + + + + C++GTG SDE+L
Sbjct: 596 GVGDSLDLVVIGAYIGKGKRTGSYGGFLLASYNQDSGE-----YETTCKIGTGFSDEDLV 650
Query: 507 AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEV 566
++ +LKP + + PK P + T NS PDVW E +I +T+D+ S +
Sbjct: 651 SIHARLKP--TEIQRPK---PYYVYDTTNSNAVPDVWFEP--TTIFEVLTADLSL--SPI 701
Query: 567 FSAPY-------SLRFPRIDRVRYDKPWHDC---LDVQSFVE 598
+ A + SLRFPR R+R DK D +V F E
Sbjct: 702 YKAAHQQYGKGISLRFPRFLRIRDDKGTEDATSSTEVSEFYE 743
>gi|50554875|ref|XP_504846.1| YALI0F01034p [Yarrowia lipolytica]
gi|49650716|emb|CAG77648.1| YALI0F01034p [Yarrowia lipolytica CLIB122]
Length = 738
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 137/500 (27%), Positives = 226/500 (45%), Gaps = 77/500 (15%)
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF----------------HEFHPD 188
KI+++ ++ E K+II + L++G++EKS+ + +PD
Sbjct: 268 KINMIKRMMGACQGNEAKFIIRSLEGKLRIGLAEKSVLVSLSQAFVTFEAENKGKKVNPD 327
Query: 189 -----AEDLFNVTCDL---KLVCEKLKDRN--QRHKRQDIEVGKAVRPQLAMRIGDAHAA 238
E + +V C L L+ + + + + + I G ++P LA
Sbjct: 328 DITAGEEMIRDVFCQLPNYALIIDAILENGIMRLSETCKISTGVPLKPMLAKPTKSISEV 387
Query: 239 WRKLHGKEVVIECKFDGDRIQIHKNGS-EIHYFSRSFLDHS-EYGHAMSKIIEQNVLVDR 296
+ E E K+DG+R QIHK S E+ +SR+ D + Y +S I +
Sbjct: 388 LDRFQDTEFTCEYKYDGERAQIHKTESGEMFVYSRNSEDMTVRYPDLVSIIPKFAGEAKS 447
Query: 297 CILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIH 353
ILD E + WD N+ F Q ++ R ++ + ++C FAFD+LY+ S++
Sbjct: 448 FILDCEAVAWDRKQNKILPF---QVLSTRKRKNVNEEEITVRVCIFAFDILYLNGESLLT 504
Query: 354 QSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETI 413
L ER + L++ T VP L + S+ NV+E++ F ++I
Sbjct: 505 LPLAERRQKLKEAF--------TEVPGEFLFAK---------SMDTSNVEEIQTFLDQSI 547
Query: 414 ENRDEGIVLKDLGSK---WEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGE 469
++ EG+++K L K +EP RS WLK+K +YI G LD++I+GGY+G G+R
Sbjct: 548 KDSCEGLMVKLLEGKESGYEPSKRSRNWLKVKKDYIDGIGDSLDLVILGGYFGKGKRSQW 607
Query: 470 VAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSF 529
FL+ + + + + F + C+ TG S+E L + KLKP + P S
Sbjct: 608 YGAFLLGVYNQDSEE-----FETVCKTATGFSEEMLQKMYDKLKPTVIE------TPHSD 656
Query: 530 YQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-------PYSLRFPRIDRVR 582
+ PDVW + ++I + +D+ S V+ A SLRFPR RVR
Sbjct: 657 VSYDSTPANLPDVWFDP--STVIEILAADLSL--SPVYKAGIDQMDRGISLRFPRFIRVR 712
Query: 583 YDKPWHDCLDVQSFVELVHS 602
DK HD VE+ +
Sbjct: 713 DDKGIHDATSSDQIVEMYQN 732
>gi|118431328|ref|NP_147713.2| ATP-dependent DNA ligase [Aeropyrum pernix K1]
gi|14423680|sp|Q9YD18.2|DNLI_AERPE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|116062651|dbj|BAA80079.2| ADP-dependent DNA ligase [Aeropyrum pernix K1]
Length = 602
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 140/523 (26%), Positives = 235/523 (44%), Gaps = 73/523 (13%)
Query: 109 AAEVLQRRQGMISGG--LTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKW 163
AA + M GG LT++ + + L R+A ++ +R K+ +L+ L+ E K+
Sbjct: 106 AARAVTLEAFMAGGGEALTVRRVYNTLYRIAMAQGEGSRDIKLRLLAGLLADAEPVEAKY 165
Query: 164 IIMIILKDLKLGISEKSIFHEF----------HPDAEDLFNVTCDLKLVCEKLKDRNQRH 213
I+ + L++G+ + ++ P E +N+ DL + E +
Sbjct: 166 IVRFVEGRLRVGVGDATVLDALAMAFGGGAHARPVIERAYNLRADLGYIAEVVAREGVDA 225
Query: 214 KRQ-DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSR 272
R +VG +RP LA R D RK+ G+ VV E K+DG+R QIHK E++ +SR
Sbjct: 226 LRGVKPQVGVPIRPMLAERGRDPAEILRKVGGRAVV-EYKYDGERAQIHKKDGEVYIYSR 284
Query: 273 SFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGS-NQEIAKAARDGLS 331
+ + + ++ + + I++GE++ D F Q K +
Sbjct: 285 RLENITRMFPDVVEMARKGLKAGEAIVEGEIVAVDPDNYEIQPFQVLMQRKRKHDIHRVM 344
Query: 332 SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
+ + F FD LYV + + L ER L+++V +ET
Sbjct: 345 REVPVAVFLFDALYVDGEDLTSKPLPERRRRLKEIV------VET--------------- 383
Query: 392 EPCWSLV----AHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEY 445
P W L + +E+ FF + IE EG+++K + S + G R W+KLK +Y
Sbjct: 384 -PLWRLAESIETSDPEELWTFFLKAIEEGAEGVMVKAVHRDSVYTAGVRGWLWVKLKRDY 442
Query: 446 IRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
D +D++++G +YG G+RGG+++ L+A A P D +P + C+V TG +DEE
Sbjct: 443 KSEMMDTVDLVVVGAFYGRGKRGGKLSSLLMA-AYDPDRDVFP----TVCKVATGFTDEE 497
Query: 505 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI--------T 556
LD ++ +K+ P++ P S+ PDVW+E + IL T
Sbjct: 498 LD----RMNEMLKKHIIPRKHP------RVESRIEPDVWVEPALVAEILGAELTLSPMHT 547
Query: 557 SDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+ T+R V S+RFPR R R DK D +E+
Sbjct: 548 CCLNTVRPGV---GISIRFPRFIRWRDDKSPEDATTTHELLEM 587
>gi|6320038|ref|NP_010117.1| DNA ligase (ATP) CDC9 [Saccharomyces cerevisiae S288c]
gi|2506361|sp|P04819.2|DNLI1_YEAST RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1; Flags:
Precursor
gi|1061275|emb|CAA91582.1| DNA ligase [Saccharomyces cerevisiae]
gi|1431259|emb|CAA98737.1| CDC9 [Saccharomyces cerevisiae]
gi|51830214|gb|AAU09681.1| YDL164C [Saccharomyces cerevisiae]
gi|151941840|gb|EDN60196.1| DNA ligase [Saccharomyces cerevisiae YJM789]
gi|256273587|gb|EEU08520.1| Cdc9p [Saccharomyces cerevisiae JAY291]
gi|259145080|emb|CAY78344.1| Cdc9p [Saccharomyces cerevisiae EC1118]
gi|285810873|tpg|DAA11697.1| TPA: DNA ligase (ATP) CDC9 [Saccharomyces cerevisiae S288c]
gi|349576917|dbj|GAA22086.1| K7_Cdc9p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 755
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 138/524 (26%), Positives = 228/524 (43%), Gaps = 84/524 (16%)
Query: 124 LTIKELNDLLDRLASSENR---AEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ E+ L +A ++ + +K+ ++ ++ E K++I + L++G++EK+
Sbjct: 259 LTVGEVFKNLRAIAKTQGKDSQLKKMKLIKRMLTACKGIEAKFLIRSLESKLRIGLAEKT 318
Query: 181 IF-------------HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEV------- 220
+ E PD + +V L+ +K++D + +I +
Sbjct: 319 VLISLSKALLLHDENREDSPDKDVPMDV---LESAQQKIRDAFCQVPNYEIVINSCLEHG 375
Query: 221 ------------GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEI 267
G ++P LA + + G+ E K+DG+R Q+H N +
Sbjct: 376 IMNLDKYCTLRPGIPLKPMLAKPTKAINEVLDRFQGETFTSEYKYDGERAQVHLLNDGTM 435
Query: 268 HYFSRSFLDHSE-YGHA-MSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA 325
+SR+ + +E Y ++ I+ ILD E + WD + F Q ++
Sbjct: 436 RIYSRNGENMTERYPEINITDFIQDLDTTKNLILDCEAVAWDKDQGKILPF---QVLSTR 492
Query: 326 ARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
R + + ++C FAFD+L D +I++SLKER E L KV K G +
Sbjct: 493 KRKDVELNDVKVKVCLFAFDILCYNDERLINKSLKERREYLTKVTKVVPGEFQYAT---- 548
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWL 439
+ +N+DE++KF E++ + EG+++K L S +EP RS WL
Sbjct: 549 -------------QITTNNLDELQKFLDESVNHSCEGLMVKMLEGPESHYEPSKRSRNWL 595
Query: 440 KLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
KLK +Y+ G LD+ ++G YYG G+R G FL+ + + F + C++GT
Sbjct: 596 KLKKDYLEGVGDSLDLCVLGAYYGRGKRTGTYGGFLLGCYNQDTGE-----FETCCKIGT 650
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI--- 555
G SDE L + +L P + PK +S PDVW E +L+
Sbjct: 651 GFSDEMLQLLHDRLTPTI--IDGPKAT------FVFDSSAEPDVWFEPTTLFEVLTADLS 702
Query: 556 TSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
S I S F SLRFPR R+R DK D VEL
Sbjct: 703 LSPIYKAGSATFDKGVSLRFPRFLRIREDKGVEDATSSDQIVEL 746
>gi|401843019|gb|EJT44979.1| CDC9-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 755
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 138/522 (26%), Positives = 225/522 (43%), Gaps = 78/522 (14%)
Query: 123 GLTIKELNDLLDRLASSENR---AEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEK 179
LT+ E+ L +A ++ + K+ ++ ++ E K++I + L++G++EK
Sbjct: 258 ALTVGEVFKNLRTIAKTQGKDSQLRKMKLIKRMLTACQGVEAKFLIRSLESKLRIGLAEK 317
Query: 180 SIF-------------HEFHPDAE--------------DLFNVTCDLKLVCEKLKDRNQR 212
++ E PD E D F + ++V +
Sbjct: 318 TVLISLSKALLLHDENKENSPDKEIPMDVLESAQQRIRDAFCQVPNYEIVINSCLNHGIM 377
Query: 213 H--KRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHY 269
+ K + G ++P LA + + G+ E K+DG+R Q+H N +
Sbjct: 378 NLDKYCTLRPGIPLKPMLAKPTKAINEVLDRFQGETFTSEYKYDGERAQVHLLNDGTMRI 437
Query: 270 FSRSFLDHSE-YGH-AMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR 327
+SR+ + +E Y ++ I+ ILD E + WD + F Q ++ R
Sbjct: 438 YSRNGENMTERYPEIKITDFIQDLNSTKNLILDCEAVAWDKEQKKILPF---QILSTRKR 494
Query: 328 DGLS---SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLN 384
+ ++C FAFD+L D +I++SL+ER E L KV K G +
Sbjct: 495 KDVELHDVKVKVCLFAFDILCYNDERLINKSLRERREHLAKVTKVVPGEFQYAT------ 548
Query: 385 SHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKL 441
++ +N+DE++KF E++ N EG+++K L S +EP RS WLKL
Sbjct: 549 -----------QIITNNLDELQKFLDESVNNSCEGLMVKMLDGPESHYEPSKRSRNWLKL 597
Query: 442 KPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 500
K +Y+ G LD+ ++G YYG G+R G FL+ + DT F + C++GTG
Sbjct: 598 KKDYLEGVGDSLDLCVLGAYYGRGKRTGTYGGFLLGCYNQ---DT--GEFETCCKIGTGF 652
Query: 501 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TS 557
SDE L + +L P + PK ++ PDVW E +L+ S
Sbjct: 653 SDEMLQLLHERLTPTI--IDGPKAT------FVFDASAEPDVWFEPTTLFEVLTADLSLS 704
Query: 558 DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
I S F SLRFPR R+R DK D +EL
Sbjct: 705 PIYKAGSATFDKGVSLRFPRFLRIREDKGVEDATSSDQIIEL 746
>gi|3515|emb|CAA27005.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 755
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 138/524 (26%), Positives = 228/524 (43%), Gaps = 84/524 (16%)
Query: 124 LTIKELNDLLDRLASSENR---AEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ E+ L +A ++ + +K+ ++ ++ E K++I + L++G++EK+
Sbjct: 259 LTVGEVFKNLRAIAKTQGKDSQLKKMKLIKRMLTACKGIEAKFLIRSLESKLRIGLAEKT 318
Query: 181 IF-------------HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEV------- 220
+ E PD + +V L+ +K++D + +I +
Sbjct: 319 VLISLSKALLLHDENREDSPDKDVPMDV---LESAQQKIRDAFCQVPNYEIVINSCLEHG 375
Query: 221 ------------GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEI 267
G ++P LA + + G+ E K+DG+R Q+H N +
Sbjct: 376 IMNLDKYCTLRPGIPLKPMLAKPTKAINEVLDRFQGETFTSEYKYDGERAQVHLLNDGTM 435
Query: 268 HYFSRSFLDHSE-YGHA-MSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA 325
+SR+ + +E Y ++ I+ ILD E + WD + F Q ++
Sbjct: 436 RIYSRNGENMTERYPEINITDFIQDLDTTKNLILDCEAVAWDKDQGKILPF---QVLSTR 492
Query: 326 ARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
R + + ++C FAFD+L D +I++SLKER E L KV K G +
Sbjct: 493 KRKDVELNDVKVKVCLFAFDILCYNDERLINKSLKERREYLTKVTKVVPGEFQYAT---- 548
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWL 439
+ +N+DE++KF E++ + EG+++K L S +EP RS WL
Sbjct: 549 -------------QITTNNLDELQKFLDESVNHSCEGLMVKMLEGPESHYEPSKRSRNWL 595
Query: 440 KLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
KLK +Y+ G LD+ ++G YYG G+R G FL+ + + F + C++GT
Sbjct: 596 KLKKDYLEGVGDSLDLCVLGAYYGRGKRTGTYGGFLLGCYNQDTGE-----FETCCKIGT 650
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI--- 555
G SDE L + +L P + PK +S PDVW E +L+
Sbjct: 651 GFSDEMLQLLHDRLTPTI--IDGPKAT------FVFDSSAEPDVWFEPTTLFEVLTADLS 702
Query: 556 TSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
S I S F SLRFPR R+R DK D VEL
Sbjct: 703 LSPIYKAGSATFDKGVSLRFPRFLRIREDKGVEDATSSDQIVEL 746
>gi|14423675|sp|Q9HH07.1|DNLI_THEFM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|12056098|emb|CAC21199.1| DNA ligase [Thermococcus fumicolans]
Length = 559
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 223/490 (45%), Gaps = 66/490 (13%)
Query: 124 LTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE-- 178
LTIK + D ++A S+ K+ L+ L +E K+I +L ++ G++E
Sbjct: 111 LTIKRVYDTFVKVAESQGEGSQDRKMKYLANLFMDAQPEEAKYIARTVLGTMRTGVAEGI 170
Query: 179 --KSIFHEFHPDAEDL---FNVTCDLKLVCEKLK-DRNQRHKRQDIEVGKAVRPQLAMRI 232
+I F AE + + +T D V + K + N+ + I+VGK VRP LA
Sbjct: 171 LRDAIAEAFKVKAELVERAYMLTSDFGYVTKVAKLEGNEGLSKVRIQVGKPVRPMLAQNA 230
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNV 292
A ++ G E E K+DG R+Q+HK+G + +SR + + + + + +
Sbjct: 231 ASVKDALLEMGG-EAAFEIKYDGARVQVHKDGDRVVIYSRRLENVTRSIPEIVEAVRSQL 289
Query: 293 LVDRCILDGEML-VWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
++ I++GE++ V D R ++ + K + + L FDVLYV S+
Sbjct: 290 RPEKAIVEGELVAVGDGGKPRPFQYVLRRFRRKYNIEEMIERIPLELNLFDVLYVDGESL 349
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ ER + L++ V+ S+ R++ LV +E E+F++
Sbjct: 350 VDTPFMERRKRLEEAVEESE-RIKL-----------------AQQLVTKKAEEAEEFYRR 391
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVA 471
+E EG++ K L S +EPG+R KWLK+KP DLD++IIG +G GRR +
Sbjct: 392 ALELGHEGLMAKRLDSVYEPGNRGKKWLKIKPTM----EDLDLVIIGAEWGEGRRAHLLG 447
Query: 472 QFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE--YPKRAPPSF 529
FLVA A D + F+ +VG+G +DE+L LKP + E Y + P
Sbjct: 448 SFLVA-----AYDQHRGEFVPVGKVGSGFTDEDLAEFTKMLKPLIVREEGKYVEIEPRVV 502
Query: 530 YQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHD 589
QVT ++ SP+ + + ++LRFPR +R DK +
Sbjct: 503 IQVTYQEIQK------SPK------------------YESGFALRFPRYVALREDKSPEE 538
Query: 590 CLDVQSFVEL 599
++ EL
Sbjct: 539 ADTIERISEL 548
>gi|449479669|ref|XP_004177044.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 3 [Taeniopygia guttata]
Length = 896
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 221/496 (44%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L +L+ ++ SVL + ++ ++K II +I DLK+ K +
Sbjct: 276 LTIQEVDEFLIQLSKLTKEDDQQSVLQQISRRCTGNDLKCIIRLIKHDLKMNAGAKHVLD 335
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKR---------QDIEVGKAVRPQLAMRIGD 234
P+A + F + +L+ V E++ Q ++ + V+P LA
Sbjct: 336 ALDPNAYEAFKASRNLQDVVERVLQNQQEAEKVPGLKRTLSVQASLMTPVQPMLAEACKS 395
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 396 IEYAMKKCPNG-MYAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDFIPQAF 453
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 454 PGGQSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDISL 509
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +V + +R E C H +
Sbjct: 510 MDRPLCERRKFLH----------DNMVEIPNXDPVLR--DETC-----HKSCRSGRHDHR 552
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
I EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 553 VIREGLEGLVLKDIKGNYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 610
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D ++ + + G D L + T+L + + P + P
Sbjct: 611 MMSIFLMGCY-----DPKTEKWCTVTKCAGGHDDATLARLQTELD-MVKISKDPSKIP-- 662
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ N PD + P+K+ + IT ++E +A S+RFPR R+R DK W
Sbjct: 663 -RWLKINKIYYPDFIVPDPKKAPVWEITG-AEFSKAEAHTADGISIRFPRCTRIRDDKDW 720
Query: 588 HDCLDVQSFVELVHSS 603
++Q EL S
Sbjct: 721 QTATNLQQLKELYQLS 736
>gi|148683723|gb|EDL15670.1| ligase III, DNA, ATP-dependent, isoform CRA_b [Mus musculus]
Length = 953
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 226/496 (45%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E++ L L+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 374 LTIQEVDAFLLHLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 433
Query: 184 EFHPDAEDLFNVTCDLKLVCEKL--------KDRNQRHK-RQDIEVGKAVRPQLAMRIGD 234
P+A + F + +L+ V E++ KD +R R + V+P LA
Sbjct: 434 ALDPNAYEAFKASRNLQDVVERVLHNEQEVEKDPGRRRALRVQASLMTPVQPMLAEACKS 493
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HK G YFSRS L H + H I +
Sbjct: 494 IEYAMKKCPNG-MFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPH-KVAHFKDYIPKAF 551
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + + FG+ KAA D +C F FD +Y D S+
Sbjct: 552 PGGQSMILDSEVLLIDNNTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 607
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + + R+ + S ++ + + D + + +E
Sbjct: 608 MDRPLCERRKFLHDNMVEIRNRI--------MFSEMKQ-----VTKASDLADMINRVIRE 654
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 655 GL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 708
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ + PD+ +++ + + G D L + +L K PS
Sbjct: 709 MMSIFLMGCYD---PDS--QKWCTVTKCAGGHDDATLARLQKEL--VMVKISKDPSKIPS 761
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ ++ N PD + P+K+ + IT RSE +A S+RFPR R+R DK W
Sbjct: 762 WLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRFPRCTRIRDDKDW 818
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 819 KSATNLPQLKELYQLS 834
>gi|71061470|ref|NP_034846.2| DNA ligase 3 [Mus musculus]
gi|29165722|gb|AAH49240.1| Ligase III, DNA, ATP-dependent [Mus musculus]
gi|53733359|gb|AAH83500.1| Ligase III, DNA, ATP-dependent [Mus musculus]
gi|74138035|dbj|BAE25421.1| unnamed protein product [Mus musculus]
gi|148683722|gb|EDL15669.1| ligase III, DNA, ATP-dependent, isoform CRA_a [Mus musculus]
Length = 1012
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 224/496 (45%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E++ L L+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 374 LTIQEVDAFLLHLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 433
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQ---------RHKRQDIEVGKAVRPQLAMRIGD 234
P+A + F + +L+ V E++ Q R R + V+P LA
Sbjct: 434 ALDPNAYEAFKASRNLQDVVERVLHNEQEVEKDPGRRRALRVQASLMTPVQPMLAEACKS 493
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HK G YFSRS L H + H I +
Sbjct: 494 IEYAMKKCPNG-MFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPH-KVAHFKDYIPKAF 551
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + + FG+ KAA D +C F FD +Y D S+
Sbjct: 552 PGGQSMILDSEVLLIDNNTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 607
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + + R+ + S ++ + + D + + +E
Sbjct: 608 MDRPLCERRKFLHDNMVEIRNRI--------MFSEMKQVTK-----ASDLADMINRVIRE 654
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 655 GL----EGLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 708
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ + PD+ +++ + + G D L + +L K PS
Sbjct: 709 MMSIFLMGCYD---PDS--QKWCTVTKCAGGHDDATLARLQKEL--VMVKISKDPSKIPS 761
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ ++ N PD + P+K+ + IT RSE +A S+RFPR R+R DK W
Sbjct: 762 WLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRFPRCTRIRDDKDW 818
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 819 KSATNLPQLKELYQLS 834
>gi|74151892|dbj|BAE29732.1| unnamed protein product [Mus musculus]
Length = 1011
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 224/496 (45%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E++ L L+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 373 LTIQEVDAFLLHLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 432
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQ---------RHKRQDIEVGKAVRPQLAMRIGD 234
P+A + F + +L+ V E++ Q R R + V+P LA
Sbjct: 433 ALDPNAYEAFKASRNLQDVVERVLHNEQEVEKDPGRRRALRVQASLMTPVQPMLAEACKS 492
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HK G YFSRS L H + H I +
Sbjct: 493 IEYAMKKCPNG-MFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPH-KVAHFKDYIPKAF 550
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + + FG+ KAA D +C F FD +Y D S+
Sbjct: 551 PGGQSMILDSEVLLIDNNTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 606
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + + R+ + S ++ + + D + + +E
Sbjct: 607 MDRPLCERRKFLHDNMVEIRNRI--------MFSEMKQVTK-----ASDLADMINRVIRE 653
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 654 GL----EGLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 707
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ + PD+ +++ + + G D L + +L K PS
Sbjct: 708 MMSIFLMGCYD---PDS--QKWCTVTKCAGGHDDATLARLQKEL--VMVKISKDPSKIPS 760
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ ++ N PD + P+K+ + IT RSE +A S+RFPR R+R DK W
Sbjct: 761 WLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRFPRCTRIRDDKDW 817
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 818 KSATNLPQLKELYQLS 833
>gi|14591397|ref|NP_143476.1| ATP-dependent DNA ligase [Pyrococcus horikoshii OT3]
gi|6225280|sp|O59288.1|DNLI_PYRHO RecName: Full=Probable thermostable DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
gi|3258051|dbj|BAA30734.1| 559aa long hypothetical DNA ligase [Pyrococcus horikoshii OT3]
Length = 559
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 156/616 (25%), Positives = 277/616 (44%), Gaps = 97/616 (15%)
Query: 10 IVLVSLFNWIQKTKPAAKKRSKFRKFLDTYC-DSVDYFSALRL--ILPSLDRERGSYGLK 66
I L L+ ++KT K FL D +D+ L L + P D ER G+
Sbjct: 4 IELAQLYQKLEKTTMKLIKTRLVADFLKRVPEDHLDFIPYLILGDVFPEWD-ER-ELGVG 61
Query: 67 ESVLANCLIDALGMS-KDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQ--GMISGG 123
E +L + A G+ K+ ++V+ + G+ A ++RR+ S
Sbjct: 62 EKLLIKAVSMATGVDPKEIENSVK-----------DTGDLGESIALAIKRRKQKSFFSQP 110
Query: 124 LTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE-- 178
LTIK + L ++A + ++ +K+ L+ L E K++ +L ++ G++E
Sbjct: 111 LTIKRVYQTLVKIAETTGEGSQEKKMKYLANLFMDAEPLEAKYLARTVLGTMRTGVAEGL 170
Query: 179 --KSIFHEFHPDAEDL---FNVTCDLKLVCEKLK-DRNQRHKRQDIEVGKAVRPQLAMRI 232
+I FH E + + +T D V + K + N+ ++ I++GK ++P LA +
Sbjct: 171 LRDAIALAFHVKVELVERAYMLTSDFGFVAKIAKAEGNEGLEKVTIQLGKPIKPMLAQQA 230
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNV 292
+ A ++ G E E K+DG R+Q+HK+G ++ +SR + + + + I++ +
Sbjct: 231 ANIKEALLEMGG-EAEFEIKYDGARVQVHKDGEKVIIYSRRLENVTRAIPEIVEAIKEAI 289
Query: 293 LVDRCILDGEM---------LVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDV 343
++ I++GE+ L + L RF + +E+ K L+ FDV
Sbjct: 290 EPEKVIVEGELVAIGEEGRPLPFQYVLRRFRRKHNIEEMMKKIPLELN--------LFDV 341
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
LYV S + ER + L+++VKP+ G+++ +L+ N +
Sbjct: 342 LYVDGKSFVDTKFIERRKKLEEIVKPN-GKIKV-----------------AENLITKNAE 383
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGS 463
E EKF+K +E EG++ K L + +EPG+R KWLK+KP +LD++IIG +G
Sbjct: 384 EAEKFYKRALEMGHEGLMAKRLDAVYEPGNRGKKWLKIKPTM----ENLDLVIIGAEWGE 439
Query: 464 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
GRR F++ A D F+ +VG+G +D++L LKP K E +
Sbjct: 440 GRRAHLFGSFILG-----AYDPETGEFLEVGKVGSGFTDDDLVEFTKMLKPLIVKEEGKR 494
Query: 524 RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 583
+P + IE + I +S + + ++LRFPR +R
Sbjct: 495 VVI------------QPKIVIEVTYQEIQ----------KSPKYRSGFALRFPRYVALRD 532
Query: 584 DKPWHDCLDVQSFVEL 599
DK D ++ +L
Sbjct: 533 DKGPEDADTIERIAQL 548
>gi|341940451|sp|P97386.2|DNLI3_MOUSE RecName: Full=DNA ligase 3; AltName: Full=DNA ligase III; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 3
Length = 1015
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 224/496 (45%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E++ L L+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 377 LTIQEVDAFLLHLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 436
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQ---------RHKRQDIEVGKAVRPQLAMRIGD 234
P+A + F + +L+ V E++ Q R R + V+P LA
Sbjct: 437 ALDPNAYEAFKASRNLQDVVERVLHNEQEVEKDPGRRRALRVQASLMTPVQPMLAEACKS 496
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HK G YFSRS L H + H I +
Sbjct: 497 IEYAMKKCPNG-MFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPH-KVAHFKDYIPKAF 554
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + + FG+ KAA D +C F FD +Y D S+
Sbjct: 555 PGGQSMILDSEVLLIDNNTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 610
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + + R+ + S ++ + + D + + +E
Sbjct: 611 MDRPLCERRKFLHDNMVEIRNRI--------MFSEMKQVTK-----ASDLADMINRVIRE 657
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 658 GL----EGLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 711
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ + PD+ +++ + + G D L + +L K PS
Sbjct: 712 MMSIFLMGCYD---PDS--QKWCTVTKCAGGHDDATLARLQKEL--VMVKISKDPSKIPS 764
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ ++ N PD + P+K+ + IT RSE +A S+RFPR R+R DK W
Sbjct: 765 WLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRFPRCTRIRDDKDW 821
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 822 KSATNLPQLKELYQLS 837
>gi|325559413|gb|ADZ30788.1| DNA ligase [Cowpox virus]
Length = 554
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 144/582 (24%), Positives = 259/582 (44%), Gaps = 54/582 (9%)
Query: 27 KKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSAD 86
K++SK + T D+ D + ++L+LP LD + K+ + +I + D
Sbjct: 21 KEKSKLIRDFITDRDATDTYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQED 76
Query: 87 AVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKI 146
++ + + G F E+ + + + LT++E++ L L+S + +I
Sbjct: 77 MLQDLGY--GYIGDTISTFFKENTEIRPKDKSI----LTLEEVDSFLTTLSSVTKESHQI 130
Query: 147 SVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKL 206
+L+ + ++K ++M+I KDLK+ + + + P+A D+F + +LK + E
Sbjct: 131 KLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPNAYDVFRKSNNLKEIIENA 190
Query: 207 KDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSE 266
+N I V + P LA + A++K + E K+DG+R+Q+HK +E
Sbjct: 191 SKQNL--DSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKKNNE 247
Query: 267 IHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIA 323
+FSR+ L H + + I + ILD E+++ D N FGS
Sbjct: 248 FAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIILDSEIVLVDEH-NVPLPFGS----L 301
Query: 324 KAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGL 383
+ + +C F FD LY + L ER L+ V+ +P+ +
Sbjct: 302 GIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNRIV 353
Query: 384 NSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKP 443
S + N ++ + + + EG+VLKD+ +EPG R +WLK+K
Sbjct: 354 FSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKR 402
Query: 444 EYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 500
+Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +G
Sbjct: 403 DYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGH 456
Query: 501 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIR 560
D L + +LK + + PK+ P + N PD +E P++S I I+
Sbjct: 457 DDNTLRVLQDQLK-MIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEF 512
Query: 561 TIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 513 TSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 554
>gi|332020242|gb|EGI60678.1| DNA ligase 3 [Acromyrmex echinatior]
Length = 775
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 147/535 (27%), Positives = 234/535 (43%), Gaps = 63/535 (11%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI++++ L+ L+ E+I +++ K A ++K II I DL++ K I
Sbjct: 58 LTIQDVDLFLENLSRLTKEEEQIQHFRSILDKCTANDLKMIIRQIKHDLRINAGPKHILE 117
Query: 184 EFHPDAEDLFNVTCDLKLVC--------EKLKDRNQRHKRQDIEVG--KAVRPQLAMRIG 233
H DA F ++ DL+ V EKL R + + V P LA
Sbjct: 118 AVHADAYKAFQMSRDLETVVRRFLSNLEEKLSASGSSLSRNKVAISLMTPVLPMLAEACT 177
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSK--IIEQN 291
A RK ++ E K+DG+R+Q+HK+G++ YFSRS + + K I++
Sbjct: 178 SVEMAMRKCPNG-MLSEVKYDGERVQVHKSGNDFRYFSRSLKPVLPHKVNLFKDYIVQAF 236
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
D ILD E+L+ D + FG+ KA + +C F FD LY +
Sbjct: 237 PDGDDLILDSEVLMVDNETGQPLPFGTLGIHKKAE----FKNANVCLFVFDCLYYNGDIL 292
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
I +S+ ER +L K R+ T +P+ + S V +P LV V ++
Sbjct: 293 IDKSMLERRNIL-------KDRM-TEIPNRIMLSEVHEVHDP-RDLVGRIVHVLKLGL-- 341
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
EG+VLKD+ SK+EPG R WLK+K +Y+ G+ D++++G +YG+G +GG
Sbjct: 342 ------EGLVLKDIDSKYEPGKRH--WLKVKKDYLCGGAMADSADLVVLGAWYGTGNKGG 393
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ D ++++ +V TG DA +T L+ + K
Sbjct: 394 MLSVFLMGCY-----DERRDKWLTVTKVHTGHD----DATLTMLQDQLDMVKIGKDVEKL 444
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWH 588
+ PD + P+K + IT T + + S+RFPR+ R+R+DK W
Sbjct: 445 PNWLHAKKPMVPDFVAKDPKKQPVWEITGAEFTNQGMHTADGISIRFPRVTRIRHDKDWS 504
Query: 589 DCLDVQSFVELVHSSNGTTQKGKEYGGLQDDK---------------PKQFRSSR 628
+ L T G+ L D K PK+ SSR
Sbjct: 505 TATTLDELRVLFKRKPETVDFGRLLDTLTDVKTSPRKKPFDPIRNTSPKKIESSR 559
>gi|68491090|ref|XP_710637.1| hypothetical protein CaO19.6155 [Candida albicans SC5314]
gi|46431866|gb|EAK91388.1| hypothetical protein CaO19.6155 [Candida albicans SC5314]
Length = 770
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 137/495 (27%), Positives = 228/495 (46%), Gaps = 76/495 (15%)
Query: 140 ENRAEKISVLSTLIK--KTNAQEMKWIIMIILKDLKLGISEKSI---FHEFHPDAEDLFN 194
E++++KIS++ ++ + + E K++I + L++G +EKSI + + E+ N
Sbjct: 290 ESQSKKISIIKQMLTACQMKSSEAKFLIRSLQGKLRIGSAEKSIIVGLAQAFVNYENKSN 349
Query: 195 VTCDLKLVCEK---LKDRNQRHKRQDIEV-------------------GKAVRPQLAMRI 232
D + E +K+ R ++ + G ++P LA
Sbjct: 350 KKIDPSKLAEAEEIMKEAFSRVPNYEVVLKTAYQYGIFNLLEHCFVTPGIPLKPMLANPT 409
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHSEYGHAMSKIIEQ 290
+ +E E K+DG R Q+H +GS I FSR+ D ++ + I +Q
Sbjct: 410 KSIGEVLDRFQNEEFTCEYKYDGVRAQVHILSDGS-IKVFSRNLEDMTQTYPDLISIGKQ 468
Query: 291 NVLVDRCI---LDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVL 344
+ I LD E + WD ++ F Q++ R ++ + Q+C FAFD+L
Sbjct: 469 FAVSGNTISMILDCEAVAWDREDHKILPF---QKLTTRKRKDVNEEDIKVQICLFAFDLL 525
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
Y + S++ +SL ER +++Q+ + P + R + + + N++
Sbjct: 526 YYDNESLLPKSLAERRKIMQENLSPIEDRFQFATATNS----------------SSNLEV 569
Query: 405 VEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 460
+++F ++I++ EG+++K L S +EP RS WLKLK +Y+ G LD+++IG Y
Sbjct: 570 LQQFLDQSIKDSCEGLMVKMLNGSESFYEPSKRSRNWLKLKKDYLEGVGDSLDLVVIGAY 629
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
G G+R G FL+A + D + C++GTG SDE+L + KL P
Sbjct: 630 NGKGKRTGTYGGFLLASYNEDSGD-----LETCCKIGTGFSDEDLLNLYNKLHP------ 678
Query: 521 YPKRAPPSFYQV--TNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSAPYSLRF 575
+ A P Y V TNNS PDVW E +L+ S I + F SLRF
Sbjct: 679 -TEIASPKNYFVYDTNNSNAVPDVWFEPSMLFEVLTADLSLSPIYKTGHQEFGKGVSLRF 737
Query: 576 PRIDRVRYDKPWHDC 590
PR RVR DK D
Sbjct: 738 PRFIRVRDDKGIEDA 752
>gi|289548048|ref|YP_003473036.1| DNA ligase I, ATP-dependent Dnl1 [Thermocrinis albus DSM 14484]
gi|289181665|gb|ADC88909.1| DNA ligase I, ATP-dependent Dnl1 [Thermocrinis albus DSM 14484]
Length = 577
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 132/509 (25%), Positives = 237/509 (46%), Gaps = 56/509 (11%)
Query: 123 GLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
GL++ ++ D L ++A + +K+ L +L++ + K+++ I++ L+LG+ E ++
Sbjct: 104 GLSVVQVYDELLKIAKTRGTLDKLMALISLLRGLSPLCAKYVMRIVVGRLRLGVGEATLL 163
Query: 183 ---------HEFHPDAEDLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQLAMRI 232
+ D E +N+ DL LV L ++ + K ++VG VR LA R+
Sbjct: 164 DALAMLAGNRNWRQDIERAYNLCSDLGLVARTLLEKGIEGVKGMKLQVGYPVRMALAERV 223
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGHAMSKIIEQN 291
A ++L GK +E K+DG R+QIHK+ + +SR+ +E + S ++
Sbjct: 224 SSAEEIIKRL-GK-CAVEAKYDGLRLQIHKSKDRVEIYSRNLERMTEMFPDITSAVLSAL 281
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFG-SNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
V+ I +GE + +D F F + Q K S + L F+FD+LYV
Sbjct: 282 AHVEDIIFEGEAISYDEETGEFHPFQITIQRKRKYGVYQYSKEYPLKLFSFDLLYVNGND 341
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
+ + ER L+ ++ G+ +T+ L S +R + E+E+FF+
Sbjct: 342 MTEEPFIERRRTLENLLS---GKQDTI-----LLSEMR---------IVETAKEIEEFFQ 384
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGE 469
+ + EGI+ K L + + G R+ W+KLK Y A +D +DV+I+G +YG G R
Sbjct: 385 DAVSRGLEGIMAKRLDAPYTAGSRNFNWIKLKRSYRGALTDTVDVVIVGYFYGKGARAKL 444
Query: 470 VAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSF 529
L+ P+ DT F + +VG+G +++E +LK + + P R
Sbjct: 445 GIGALLTAVYDPSTDT----FKTISKVGSGFTEDEW----IRLKNLLDEIKLPHR----- 491
Query: 530 YQVTNNSKERPDVWIESPEKSIILSITSD------IRTIRSEVFSAPYSLRFPR-IDRVR 582
+S DVW+E ++++T+D + T + Y+LRFPR + +R
Sbjct: 492 -HARVDSILEADVWVEP---KYVVTVTADEITRSPLHTAGRTITEPGYALRFPRAVGFIR 547
Query: 583 YDKPWHDCLDVQSFVELVHSSNGTTQKGK 611
DK D V+ + L + +G+
Sbjct: 548 IDKKPEDATTVEEILRLYQLQRKVSTEGE 576
>gi|149053630|gb|EDM05447.1| rCG33581, isoform CRA_b [Rattus norvegicus]
Length = 1015
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 230/496 (46%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E++ L L+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 374 LTIQEVDAFLLHLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 433
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 434 ALDPNAYEAFKASRNLQDVVERVLHNEQEVEKDPGRRRALSVQASLMTPVQPMLAEACKS 493
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HK G YFSRS L H + H I +
Sbjct: 494 IEYAMKKCPNG-MFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPH-KVAHFKDYIPKAF 551
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + + FG+ KAA D +C F FD +Y D S+
Sbjct: 552 PGGQSMILDSEVLLIDNNTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 607
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + + R+ + S ++ + + D + + +E
Sbjct: 608 MDRPLCERRKFLHDNMVEIRNRI--------MFSEMKQVTK-----ASDLADMINRVIRE 654
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 655 GL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 708
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ + PD+ +++ + + G D L A + K + + P + PS
Sbjct: 709 MMSIFLMGCYD---PDS--QKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKI-PS 761
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ ++ N PD + P+K+ + IT RSE +A S+RFPR R+R DK W
Sbjct: 762 WLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRFPRCTRIRDDKDW 818
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 819 KSATNLPQLKELYQLS 834
>gi|325558988|gb|ADZ30365.1| DNA ligase [Cowpox virus]
Length = 554
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 143/582 (24%), Positives = 257/582 (44%), Gaps = 54/582 (9%)
Query: 27 KKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSAD 86
K++SK + T D D + ++L+LP LD + K+ + +I + D
Sbjct: 21 KEKSKLIRDFITDRDDTDTYLIIKLLLPGLDNRMYNMNDKQIIKLYSII----FKQSQED 76
Query: 87 AVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKI 146
++ + + G F E+ R + + LT++E++ L L+S + +I
Sbjct: 77 MLQDLGY--GYIGDTIRTFFKENTEIRPRDKSI----LTLEEVDSFLTTLSSVTKESHQI 130
Query: 147 SVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKL 206
+L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 131 KLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE-- 188
Query: 207 KDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSE 266
+ Q + V + P LA + A++K + E K+DG+R+Q+HKN +E
Sbjct: 189 NESKQNLDSISVSVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNNNE 247
Query: 267 IHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIA 323
+FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 248 FAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS----L 301
Query: 324 KAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGL 383
+ + +C F FD LY + L ER L+ V+ +P+ +
Sbjct: 302 GIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNRIV 353
Query: 384 NSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKP 443
S + N ++ + + + EG+VLKD+ +EPG R +WLK+K
Sbjct: 354 FSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKR 402
Query: 444 EYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 500
+Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +G
Sbjct: 403 DYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGH 456
Query: 501 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIR 560
D L + +L + + PK+ P + N PD +E P++S I I+
Sbjct: 457 DDNTLRVLQDQL-TMVKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEF 512
Query: 561 TIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 513 TSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 554
>gi|58865590|ref|NP_001012011.1| DNA ligase 3 [Rattus norvegicus]
gi|55249814|gb|AAH85959.1| Ligase III, DNA, ATP-dependent [Rattus norvegicus]
Length = 943
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 136/498 (27%), Positives = 227/498 (45%), Gaps = 55/498 (11%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E++ L L+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 374 LTIQEVDAFLLHLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 433
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 434 ALDPNAYEAFKASRNLQDVVERVLHNEQEVEKDPGRRRALSVQASLMTPVQPMLAEACKS 493
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HK G YFSRS L H + H I +
Sbjct: 494 IEYAMKKCPNG-MFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPH-KVAHFKDYIPKAF 551
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + + FG+ KAA D +C F FD +Y D S+
Sbjct: 552 PGGQSMILDSEVLLIDNNTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 607
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + + R+ + S ++ + + D + + +E
Sbjct: 608 MDRPLCERRKFLHDNMVEIRNRI--------MFSEMKQ-----VTKASDLADMINRVIRE 654
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 655 GL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 708
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP-- 526
++ FL+ + PD+ ++ C G DA + +L+ + K
Sbjct: 709 MMSIFLMGCYD---PDSQKWCTVTKCAGGHD------DATLARLQKELDMVKISKDPSKI 759
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDK 585
PS+ ++ N PD + P+K+ + IT RSE +A S+RFPR R+R DK
Sbjct: 760 PSWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRFPRCTRIRDDK 816
Query: 586 PWHDCLDVQSFVELVHSS 603
W ++ EL S
Sbjct: 817 DWKSATNLPQLKELYQLS 834
>gi|241952605|ref|XP_002419024.1| DNA ligase I, mitochondrial precursor, putative;
polydeoxyribonucleotide synthase [ATP] [Candida
dubliniensis CD36]
gi|223642364|emb|CAX42606.1| DNA ligase I, mitochondrial precursor, putative [Candida
dubliniensis CD36]
Length = 848
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 229/496 (46%), Gaps = 80/496 (16%)
Query: 140 ENRAEKISVLSTLIKKTNAQ--EMKWIIMIILKDLKLGISEKSI---FHEFHPDAEDLFN 194
E++++KIS++ ++ + E K++I + L++G +EKSI + + E+ N
Sbjct: 368 ESQSKKISIIKQMLTACQMKSCEAKFLIRSLQGKLRIGSAEKSIIIGLAQAFVNYENKSN 427
Query: 195 VTCDLKLVCEK---LKDRNQRHKRQDIEV-------------------GKAVRPQLAMRI 232
D + E +K+ R ++ + G ++P LA
Sbjct: 428 KKIDASKLTEAEEIMKEAFSRVPNYEVVLKTAYQYGIFNLLEHCFVTPGIPLKPMLANPT 487
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHSE-YGHAMSKIIE 289
+ +E E K+DG R Q+H +GS + FSR+ D ++ Y +S I
Sbjct: 488 KSIGEVLDRFQNEEFTCEYKYDGVRAQVHILSDGS-VKVFSRNLEDMTQTYPDLIS--IG 544
Query: 290 QNVLVD----RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFD 342
+ VD ILD E + WD ++ F Q++ R ++ + Q+C FAFD
Sbjct: 545 KQFAVDGNTISMILDCEAVAWDREAHKILPF---QKLTTRKRKDVNEEDIKVQICLFAFD 601
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
+LY + S++ +SL +R +++Q+ + P + R + + + N+
Sbjct: 602 LLYYNNESLLPKSLADRRKIMQENLSPIEDRFQFATATNS----------------SSNL 645
Query: 403 DEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIG 458
+ +++F ++I++ EG+++K L S +EP RS WLKLK +Y+ G LD+++IG
Sbjct: 646 EVLQQFLDQSIKDSCEGLMVKMLNGSDSFYEPSKRSRNWLKLKKDYLEGVGDSLDLVVIG 705
Query: 459 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 518
Y G G+R G FL+A + D + C++GTG SDE+L + KL P
Sbjct: 706 AYNGKGKRTGTYGGFLLASYNEDSGD-----LETCCKIGTGFSDEDLLNLYNKLHP---- 756
Query: 519 YEYPKRAPPSFYQV--TNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSAPYSL 573
+ A P Y V TNNS PDVW E +L+ S I + F SL
Sbjct: 757 ---TEIASPKNYFVYDTNNSNAVPDVWFEPSMLFEVLTADLSLSPIYKTGHQEFGKGVSL 813
Query: 574 RFPRIDRVRYDKPWHD 589
RFPR RVR DK D
Sbjct: 814 RFPRFIRVRDDKGVED 829
>gi|298248791|ref|ZP_06972596.1| DNA ligase I, ATP-dependent Dnl1 [Ktedonobacter racemifer DSM
44963]
gi|297551450|gb|EFH85316.1| DNA ligase I, ATP-dependent Dnl1 [Ktedonobacter racemifer DSM
44963]
Length = 583
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 143/531 (26%), Positives = 247/531 (46%), Gaps = 77/531 (14%)
Query: 103 GNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNAQ 159
G+ +VAA++ + I +++ E+ +L +A + + +K +L L+ + +
Sbjct: 89 GDLGLVAAQIQGETEQPIQK-VSVNEVFTVLQTIAQTAGKGAIEKKRVLLVGLLDHVDGE 147
Query: 160 EMKWIIMIILKDLKLGISEKSIFHEFH----PDA------EDLFNVTCDLKLVCEKLKDR 209
K+ + I+L L+LGI + +I DA E +++VT DL L+ L +
Sbjct: 148 SAKYSVRIVLGKLRLGIGDATILDALAITKWNDAKKRKLLEGVYHVTSDLGLIARTLWEH 207
Query: 210 NQRHKRQ------DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKN 263
+ + Q DI VG+ + QLA R+ A A K+ VV + K+DG R+QIHKN
Sbjct: 208 PEAEEAQRAIASLDIAVGRPIHSQLAERLPTAEAIIEKM--GSVVAQYKYDGFRVQIHKN 265
Query: 264 GSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIA 323
G +I FSR+ + ++ + + V ++ ILDGE L ++ + F F QE
Sbjct: 266 GQQIAIFSRNLENLTDMFPEILEATRTQVQAEQAILDGEALAYNATSEEFLPF---QETT 322
Query: 324 KAARDG----LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVP 379
+ R ++ + L F FD+LY S++ L+ER ++L++ + ++ L
Sbjct: 323 RRRRKHGVALMAQELPLKAFVFDILYKDGASLLEYPLEERLKVLEETIPQTRNTLMV--- 379
Query: 380 DHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWL 439
SH + + + F E I EG+V+K GS +E G R+ W+
Sbjct: 380 ---TRSH-----------LVDDAKSLTLLFDEAISKGLEGLVVKRWGSHYEAGARNYNWV 425
Query: 440 KLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K+K A D +D +++G +G G+R A L+ D RF++ ++GT
Sbjct: 426 KIKRHAAGALDDTIDGVLLGYLFGRGKRAALGAGALLV----GVYDARQDRFVTVTKIGT 481
Query: 499 GLSDEELDAVVTKLK--PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSIT 556
GLSDE+ ++ + K P R+ P R F +T P VW++ +I++ +
Sbjct: 482 GLSDEQWGSIRERTKGLPTDRQ---PARV---FSLIT------PSVWLKP---AIVIEVL 526
Query: 557 SDIRTIRSEVFSA-------PYSLRFPRIDRVR-YDKPWHDCLDVQSFVEL 599
+D RS +A Y+LRFPR+ R DK D V+ +E+
Sbjct: 527 AD-EITRSPNHTAGKVGDEPGYALRFPRLIAFRDRDKQPEDATTVEEVIEM 576
>gi|365766695|gb|EHN08190.1| Cdc9p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 732
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 138/524 (26%), Positives = 227/524 (43%), Gaps = 84/524 (16%)
Query: 124 LTIKELNDLLDRLASSENR---AEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ E+ L +A ++ + +K+ ++ ++ E K++I + L++G++EK+
Sbjct: 236 LTVGEVFKNLRXIAKTQGKDSQLKKMKLIKRMLTACKGIEAKFLIRSLESKLRIGLAEKT 295
Query: 181 IF-------------HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEV------- 220
+ E PD + +V L+ +K++D + +I +
Sbjct: 296 VLISLSKALLLHDENREDSPDKDVPMDV---LESAQQKIRDAFCQVPNYEIVINSCLEHG 352
Query: 221 ------------GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEI 267
G ++P LA + + G+ E K+DG+R Q H N +
Sbjct: 353 IMNLDKYCTLRPGIPLKPMLAKPTKAINEVLDRFQGETFTSEYKYDGERAQXHLLNDGTM 412
Query: 268 HYFSRSFLDHSE-YGHA-MSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA 325
+SR+ + +E Y ++ I+ ILD E + WD + F Q ++
Sbjct: 413 RIYSRNGENMTERYPEINITDFIQDLDTTKNLILDCEAVAWDKDQGKILPF---QVLSTR 469
Query: 326 ARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
R + + ++C FAFD+L D +I++SLKER E L KV K G +
Sbjct: 470 KRKDVELNDVKVKVCLFAFDILCYNDERLINKSLKERREYLTKVTKVVPGEFQYAT---- 525
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWL 439
+ +N+DE++KF E++ + EG+++K L S +EP RS WL
Sbjct: 526 -------------QITTNNLDELQKFLDESVNHSCEGLMVKMLEGPESHYEPSKRSRNWL 572
Query: 440 KLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
KLK +Y+ G LD+ ++G YYG G+R G FL+ + + F + C++GT
Sbjct: 573 KLKKDYLEGVGDSLDLCVLGAYYGRGKRTGTYGGFLLGCYNQDTGE-----FETCCKIGT 627
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI--- 555
G SDE L + +L P + PK +S PDVW E +L+
Sbjct: 628 GFSDEMLQLLHDRLTPTI--IDGPKAT------FVFDSSAEPDVWFEPTTLFEVLTADLS 679
Query: 556 TSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
S I S F SLRFPR R+R DK D VEL
Sbjct: 680 LSPIYKAGSATFDKGVSLRFPRFLRIREDKGVEDATSSDQIVEL 723
>gi|167043262|gb|ABZ07968.1| putative DNA ligase N-terminal domain [uncultured marine
crenarchaeote HF4000_ANIW141M12]
Length = 585
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 148/580 (25%), Positives = 256/580 (44%), Gaps = 112/580 (19%)
Query: 79 GMSKDSADAVRLI--NWRKGGAAPNAGNFPMVAAEVLQRRQ--GMISGGLTIKELNDLLD 134
+SK S +++ I ++RK G+ + A+ +L+ + + +T++ + + L
Sbjct: 68 AISKSSGLSIKKIEDDYRK------VGDLGLTASNILKLKTQTTFTAEKITLERVYETLF 121
Query: 135 RLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF--------- 182
++A E + K+ +S+L+ E K+++ I+L L+LG++E ++
Sbjct: 122 KIAKLEGKGSQDLKMKHISSLLNDATPLEAKFVLKILLGTLRLGVAENTVMDALAIAFTG 181
Query: 183 -HEFHPDAEDLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQLAMRIGDAHAAWR 240
E E+ +NV+ DL V + + K+ I + +RP LA R+ A +
Sbjct: 182 KKENKERIENAYNVSSDLGKVSQMVATNGIDGIKKFKISLFSPIRPMLADRVKSEKEAIK 241
Query: 241 KLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILD 300
K+ + E K DG+R+QIHK ++I FSR + ++Y + + I +++ V I +
Sbjct: 242 KMP-ELFSAEYKLDGERVQIHKQANKIILFSRRLENITQYYPDIVENIGKSLNVHEGIFE 300
Query: 301 GEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFA----FDVLYVGDTSVIHQSL 356
E++ + + F F QE+ R L Y FDVLY + ++
Sbjct: 301 AEIVPINENTGEFLPF---QELMHRRRKYKLEQAVLQYPITVNFFDVLYFDNKDCLNLEY 357
Query: 357 KERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENR 416
ER ++L+K+V ++ LVP L+ N +EV F + +I
Sbjct: 358 SERRKILEKLV--NEDNFSKLVP----------------MLLVKNENEVGDFLENSINAG 399
Query: 417 DEGIVLKDLGSKWEPGDRSGKWLKLKPEY-IRAGSDLDVLIIGGYYGSGRRGGEVAQFLV 475
EG++LK + + G R WLKLK EY G LD+++IG Y+G GRR G L+
Sbjct: 400 CEGLMLKTPSAPYRAGSRGSNWLKLKREYRNELGDSLDLIVIGAYFGRGRRTGLYGTLLL 459
Query: 476 ALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNN 535
P D +P S C+VGTG +DE LD YQ+ +N
Sbjct: 460 G-TYNPEQDNFP----SICKVGTGFTDESLD---------------------QLYQILSN 493
Query: 536 -----------SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-------------- 570
S+ DVW+E PE ++L I + SE+ +P
Sbjct: 494 NVTLKKNSRIISEMEADVWLE-PE--LVLEIVA------SEITLSPIHKTGLDLIRKNSG 544
Query: 571 YSLRFPRID-RVRYDKPWHDCLDVQSFVELVHSSNGTTQK 609
++LRFP+ ++RY+K D V+ + L + Q+
Sbjct: 545 FALRFPKFTGKIRYEKAVEDASTVEEVLTLYKRQSKINQE 584
>gi|149053629|gb|EDM05446.1| rCG33581, isoform CRA_a [Rattus norvegicus]
Length = 956
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 230/496 (46%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E++ L L+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 374 LTIQEVDAFLLHLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 433
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 434 ALDPNAYEAFKASRNLQDVVERVLHNEQEVEKDPGRRRALSVQASLMTPVQPMLAEACKS 493
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HK G YFSRS L H + H I +
Sbjct: 494 IEYAMKKCPNG-MFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPH-KVAHFKDYIPKAF 551
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + + FG+ KAA D +C F FD +Y D S+
Sbjct: 552 PGGQSMILDSEVLLIDNNTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 607
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + + R+ + S ++ + + D + + +E
Sbjct: 608 MDRPLCERRKFLHDNMVEIRNRI--------MFSEMKQ-----VTKASDLADMINRVIRE 654
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 655 GL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 708
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ + PD+ +++ + + G D L A + K + + P + PS
Sbjct: 709 MMSIFLMGCYD---PDS--QKWCTVTKCAGGHDDATL-ARLQKELDMVKISKDPSKI-PS 761
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ ++ N PD + P+K+ + IT RSE +A S+RFPR R+R DK W
Sbjct: 762 WLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRFPRCTRIRDDKDW 818
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 819 KSATNLPQLKELYQLS 834
>gi|305662687|ref|YP_003858975.1| ATP-dependent DNA ligase I [Ignisphaera aggregans DSM 17230]
gi|304377256|gb|ADM27095.1| DNA ligase I, ATP-dependent Dnl1 [Ignisphaera aggregans DSM 17230]
Length = 604
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 144/531 (27%), Positives = 242/531 (45%), Gaps = 71/531 (13%)
Query: 113 LQRRQGMISGGLTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIIL 169
++ +G + LT+ E+ L ++A + +R K+ +LS+L+ + +E K+I+ I
Sbjct: 113 IKSAKGEVYKKLTVDEVYSQLVKIAMLQGEGSRDMKLRLLSSLLAVADPKEAKYIVRFIE 172
Query: 170 KDLKLGISEKSI-------FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRH-KRQDIEVG 221
L+LG+ E +I F E +N+ DL + + L ++ K G
Sbjct: 173 GRLRLGVGEATIMDGLASAFGAPRDLIERAYNIYPDLGAIAKLLAEKGVVELKNIKPTPG 232
Query: 222 KAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYG 281
+RP LA R D K G + E K+DG+R QIHK G I FSR + +
Sbjct: 233 IPLRPMLAERASDPTEILNK-AGIPALAEFKYDGERAQIHKKGDRIWIFSRRLEEITNQY 291
Query: 282 HAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG----LSSDRQLC 337
+ ++ + + + I++GE++ D F F QE+ R + +
Sbjct: 292 PDVVEMALKRIKAEEAIVEGEIIAIDPETGEFRPF---QELMHRKRKKDIHEALKEYPVV 348
Query: 338 YFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSL 397
FD LYV + + L ER E+L+K++ S+ + + +
Sbjct: 349 VRLFDCLYVDGIDMTLKILPERREMLRKIIDESE------------------EFKLAEGM 390
Query: 398 VAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDV 454
+ +N E+E FF + +E EG+V+K LG S ++ G R W+K K +Y +D +D+
Sbjct: 391 IVNNTAELETFFLKAVEAGCEGLVVKSLGRDSVYQAGVRGWLWIKYKRDYKSEMTDTVDL 450
Query: 455 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 514
+++G ++G G+R G L+A A P DT F + C+VGTG +DEEL + KL+P
Sbjct: 451 VVVGAFHGRGKRAGTYGALLLA-AYDPESDT----FKTVCKVGTGFTDEELAELPKKLEP 505
Query: 515 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTI-------RSEVF 567
Y R P ++V +S DVW E ++++ +T T+ R V
Sbjct: 506 Y--------RLPHKHHRV--DSDIEADVWFEP---AVVMEVTGAELTLSPLHTCCRGMVK 552
Query: 568 SA-PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS-----SNGTTQKGKE 612
S+RFPR R R DK + + +E+ + S TT G+E
Sbjct: 553 QGVGISIRFPRFVRWRPDKSPKEITTTKEILEMYYRQLRKVSQTTTGVGEE 603
>gi|145552160|ref|XP_001461756.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429592|emb|CAK94383.1| unnamed protein product [Paramecium tetraurelia]
Length = 564
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 146/538 (27%), Positives = 252/538 (46%), Gaps = 89/538 (16%)
Query: 124 LTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ ++ + L +L E EK +L+ L++ E K+II I K+LK+G +EK+
Sbjct: 67 LTMIQVFNTLQQLQKQEGTGSSLEKERILTNLLRMAKPIEAKYIIRFIEKNLKIGAAEKT 126
Query: 181 I-------FHEFHP-----DAEDLFNVTCDLKLVCE------------KLKDRNQRHKRQ 216
+ F +H D E + N + +CE ++ + +
Sbjct: 127 MQAALARAFQLYHKGNVEGDYESIIN-----QALCECPNYKKIIDTLFSIQSLKEVPEVC 181
Query: 217 DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLD 276
I G +P LA + +++ + E K+DG R QIH ++ FSR+ +
Sbjct: 182 HIIPGVPCKPMLAKPMKSIQMIFQRFENMKFTCEYKYDGLRGQIHFENGQVSIFSRNLEN 241
Query: 277 HSE-YGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQ 335
++ Y ++ I +D I+D E++ +D + NR F + AK D + Q
Sbjct: 242 MTQTYPDIVTYIHTHYKHLDGFIIDSEIVAYDVANNRILPFQTLTSRAKKNVDQNQIEIQ 301
Query: 336 LCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW 395
+C + FD+LY+ S + ++L++R + L++ K +G+L+
Sbjct: 302 VCLYIFDLLYLNRQSFLKETLEKRRQTLRETFKEEEGKLKFAT----------------- 344
Query: 396 SLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAG-SD- 451
S + N +E+E+F +I+ EG+++K L S++EP RS WLKLK +Y+ G SD
Sbjct: 345 SRDSENFEEIEEFLLNSIKMGCEGLMIKTLEVNSQYEPAKRSFNWLKLKKDYLDNGLSDT 404
Query: 452 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 511
D++ IG YG+G+R G +L+A D Y + C++GTG SDE L+ K
Sbjct: 405 FDLVPIGACYGTGKRKGFYGSYLLACYNEDM-DQYE----TTCKIGTGFSDENLE----K 455
Query: 512 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS-DIRTIRSEVFSAP 570
+F++Y P P S Y+ + DVW SP ++ I S DI+ S ++SA
Sbjct: 456 FFQFFQEYLIPH--PLSEYKCDGVNM---DVWF-SP--VVVWEIKSADIQI--SPIYSAC 505
Query: 571 YS----------LRFPRIDRVRYDKPWHDCLDVQSFVEL-----VHSSNGTTQKGKEY 613
+ LRFPR+ +VR DK ++ Q ++ V +SN T ++ ++
Sbjct: 506 STILQLNNKGVGLRFPRLIKVREDKKPNEATSSQFLYDVYKQQAVVASNNTFEQDDDF 563
>gi|392300662|gb|EIW11753.1| Cdc9p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 732
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 140/524 (26%), Positives = 228/524 (43%), Gaps = 84/524 (16%)
Query: 124 LTIKELNDLLDRLASSENR---AEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ E+ L +A ++ + +K+ ++ ++ E K++I + L++G++EK+
Sbjct: 236 LTVGEVFKNLRAIAKTQGKDSQLKKMKLIKRMLTACKGIEAKFLIRSLESKLRIGLAEKT 295
Query: 181 IF-------------HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEV------- 220
+ E PD + +V L+ +K++D + +I +
Sbjct: 296 VLISLSKALLLHDENREDSPDKDVPMDV---LESAQQKIRDAFCQVPNYEIVINSCLEHG 352
Query: 221 ------------GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEI 267
G ++P LA + + G+ E K+DG+R Q H N +
Sbjct: 353 IMNLDKYCTLRPGIPLKPMLAKPTKAINEVLDRFQGETFTSEYKYDGERAQAHLLNDGTM 412
Query: 268 HYFSRSFLDHSE-YGHA-MSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA 325
+SR+ + +E Y ++ I+ ILD E + WD + F Q ++
Sbjct: 413 RIYSRNGENMTERYPEINITDFIQDLDTTKNLILDCEAVAWDKDQGKILPF---QVLSTR 469
Query: 326 ARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
R + + ++C FAFD+L D +I++SLKER E L KV K G +
Sbjct: 470 KRKDVELNDVKVKVCLFAFDILCYNDERLINKSLKERREYLTKVTKVVPGEFQYAT---- 525
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWL 439
+ +N+DE++KF E++ + EG+++K L S +EP RS WL
Sbjct: 526 -------------QITTNNLDELQKFLDESVNHSCEGLMVKMLEGPESHYEPSKRSRNWL 572
Query: 440 KLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
KLK +Y+ G LD+ ++G YYG G+R G FL+ + DT F + C++GT
Sbjct: 573 KLKKDYLEGVGDSLDLCVLGAYYGRGKRTGTYGGFLLGCYNQ---DT--GEFETCCKIGT 627
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI--- 555
G SDE L + +L P + PK +S PDVW E +L+
Sbjct: 628 GFSDEMLQLLHDRLTPTI--IDGPKAT------FVFDSSAEPDVWFEPTTLFEVLTADLS 679
Query: 556 TSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
S I S F SLRFPR R+R DK D VEL
Sbjct: 680 LSPIYKAGSATFDKGVSLRFPRFLRIREDKGVEDATSSDQIVEL 723
>gi|429962074|gb|ELA41618.1| DNA ligase I, ATP-dependent (dnl1) [Vittaforma corneae ATCC 50505]
Length = 588
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 154/604 (25%), Positives = 269/604 (44%), Gaps = 90/604 (14%)
Query: 41 DSVDYFSALRLILPSL--DRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGA 98
DS S L L S+ D G+ E ++ + + G++ V+ I R
Sbjct: 45 DSQSLSSVLYLCHASIYPDYHNTELGIGEHMIQMVVAEGTGLT------VKTIKQR---- 94
Query: 99 APNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE---KISVLSTLIKK 155
G+ +A E + + LT+ E+ D L R++ R K +++ +LI
Sbjct: 95 YIKTGDLGEIAMESRVNQLFISKRQLTVVEVVDQLRRISRETGRNSMNSKKNIMLSLISA 154
Query: 156 TNAQEMKWIIMIILKDLKLGISEKSI-------FHEFHPDA-EDLFNVTCDLKLVCEKLK 207
++ E K++I + LK+G++ +++ F E DA ++ +N D + + + L
Sbjct: 155 SSPLEAKYMIRLFECQLKIGLALQTVLISLSLAFGEHEHDAIKEAYNKHPDFEHLSKMLL 214
Query: 208 DRN--QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGS 265
+ + H+ I G V+P LA + A+ K+ +E + E K+DG+R+QIH
Sbjct: 215 EHGVERLHEMCSIVPGIPVKPMLAQPSKNLTTAFAKVENEEFLSEFKYDGERVQIHHFDG 274
Query: 266 EIHYFSRSFLDHSEYGHAMS--KIIEQNVLVDRCILDGEMLVW-DTSLNRFAEFGSNQEI 322
+ FSR+ D +E +S KI E++ +LDGE + + D ++ F Q +
Sbjct: 275 KTKVFSRNSEDLTEKYPDISSLKINEKSF-----VLDGEAVAYEDGAILPF------QTL 323
Query: 323 AKAARDGLSS-DRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ R + + +C F FD+L+ ++H K R ++L+ K +L+
Sbjct: 324 STRKRKNIDKIEVNVCVFVFDLLFYDSQELVHYPFKTRRDILKSNFKEIDDKLQM----- 378
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
G C S +++V+ FK ++ EG++LK L S ++P RS KW+KL
Sbjct: 379 -------ANGVECTS-----IEDVDSHFKVALQANCEGVMLKLLQSIYKPSHRSNKWVKL 426
Query: 442 KPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 500
K +Y+ G LD+++IG +YG G+R G FL+A+ +F + C++GTG
Sbjct: 427 KKDYLDNLGDSLDLVVIGAFYGKGKRTGNFGGFLLAVYNDETD-----KFEACCKIGTGF 481
Query: 501 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKE-RPDVWIESPE----KSIILSI 555
+DE L +L P + +V N + +PDVWIE K+ LS
Sbjct: 482 NDEALQLYYDQLSPLI---------TANLSRVVYNERSVKPDVWIEPKYVWEVKAASLS- 531
Query: 556 TSDIRTIRSEVFSA-----PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG 610
S ++SA SLRFPR + R DK D V + + + +
Sbjct: 532 -------HSPIYSAGSSEKGISLRFPRFIKERPDKKPEDATTSNQIVRMYNENKNAEESE 584
Query: 611 KEYG 614
++
Sbjct: 585 DDFN 588
>gi|401626455|gb|EJS44401.1| cdc9p [Saccharomyces arboricola H-6]
Length = 757
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 175/389 (44%), Gaps = 40/389 (10%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHSE 279
G ++P LA + + G+ E K+DG+R Q+H N + +SR+ + +E
Sbjct: 390 GIPLKPMLAKPTKAINEVLDRFQGETFTSEYKYDGERAQVHLLNDGTMRIYSRNGENMTE 449
Query: 280 -YGH-AMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLC 337
Y ++ IE ILD E + WD + F + + ++C
Sbjct: 450 RYPEIKITDFIEDLDATKNLILDCEAVAWDKEQGKILPFQVLSTRKRKDVELTDVKVKVC 509
Query: 338 YFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSL 397
FAFD+L D +I+QSL+ER + L KV K G E +
Sbjct: 510 LFAFDILCHNDERLINQSLRERRDYLAKVTKVVPGEFEYAT-----------------QI 552
Query: 398 VAHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLD 453
+ +N+DE++KF +++ + EG+++K L S +EP RS WLKLK +Y+ G LD
Sbjct: 553 ITNNLDELQKFLDDSVNHSCEGLMVKMLEGPESHYEPSKRSRNWLKLKKDYLDGVGDSLD 612
Query: 454 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 513
+ ++G YYG G+R G FL+ + DT F + C++GTG SDE L + +L
Sbjct: 613 LCVLGAYYGRGKRTGTYGGFLLGCYNQ---DT--GEFETCCKIGTGFSDEMLQQLHERLT 667
Query: 514 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSAP 570
P + PK +S PDVW E +L+ S I S F
Sbjct: 668 PTI--IDGPKAT------FVFDSSAEPDVWFEPTTLFEVLTADLSLSPIYKAGSATFDKG 719
Query: 571 YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
SLRFPR R+R DK D VEL
Sbjct: 720 VSLRFPRFLRIREDKGVEDATSSDQIVEL 748
>gi|207347088|gb|EDZ73389.1| YDL164Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 755
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 137/524 (26%), Positives = 228/524 (43%), Gaps = 84/524 (16%)
Query: 124 LTIKELNDLLDRLASSENR---AEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ E+ L +A ++ + +K+ ++ ++ E K++I + L++G++EK+
Sbjct: 259 LTVGEVFKNLRAIAKTQGKDSQLKKMKLIKRMLTACKGIEAKFLIRSLESKLRIGLAEKT 318
Query: 181 IF-------------HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEV------- 220
+ E PD + +V L+ +K++D + +I +
Sbjct: 319 VLISLSKALLLHDENREDSPDKDVPMDV---LESAQQKIRDAFCQVPNYEIVINSCLEHG 375
Query: 221 ------------GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEI 267
G ++P LA + + G+ E K+DG+R Q+H N +
Sbjct: 376 IMNLDKYCTLRPGIPLKPMLAKPTKAINEVLDRFQGETFTSEYKYDGERAQVHLLNDGTM 435
Query: 268 HYFSRSFLDHSE-YGHA-MSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA 325
+SR+ + +E Y ++ I+ ILD E + WD + F Q ++
Sbjct: 436 RIYSRNGENMTERYPEINITDFIQDLDTTKNLILDCEAVAWDKDQGKILPF---QVLSTR 492
Query: 326 ARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
R + + ++C FAFD+L + +I++SLKER E L KV K G +
Sbjct: 493 KRKDVELNDVKVKVCLFAFDILCYNNERLINKSLKERREYLTKVTKVVPGEFQYAT---- 548
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWL 439
+ +N+DE++KF E++ + EG+++K L S +EP RS WL
Sbjct: 549 -------------QITTNNLDELQKFLDESVNHSCEGLMVKMLEGPESHYEPSKRSRNWL 595
Query: 440 KLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
KLK +Y+ G LD+ ++G YYG G+R G FL+ + + F + C++GT
Sbjct: 596 KLKKDYLEGVGDSLDLCVLGAYYGRGKRTGTYGGFLLGCYNQDTGE-----FETCCKIGT 650
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI--- 555
G SDE L + +L P + PK +S PDVW E +L+
Sbjct: 651 GFSDEMLQLLHDRLTPTI--IDGPKAT------FVFDSSAEPDVWFEPTTLFEVLTADLS 702
Query: 556 TSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
S I S F SLRFPR R+R DK D VEL
Sbjct: 703 LSPIYKAGSATFDKGVSLRFPRFLRIREDKGVEDATSSDQIVEL 746
>gi|193084345|gb|ACF10002.1| ATP-dependent DNA ligase [uncultured marine crenarchaeote
SAT1000-49-D2]
Length = 585
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 139/551 (25%), Positives = 241/551 (43%), Gaps = 96/551 (17%)
Query: 102 AGNFPMVAAEVLQ--RRQGMISGGLTIKELNDLLDRLASSENRAE---KISVLSTLIKKT 156
+G+ + A+ +L+ + + +T++ + + L ++A E + K+ +S+L+
Sbjct: 87 SGDLGLTASNILKIKTQTTFTAEKITVERVYETLFKIAKLEGKGSQDLKMKYISSLLNDA 146
Query: 157 NAQEMKWIIMIILKDLKLGISEKSIF----------HEFHPDAEDLFNVTCDL-KLVCEK 205
E K+++ I+L L+LGI+E ++ E E+ +NV+ DL K+
Sbjct: 147 TPLEAKFVLKILLGTLRLGIAENTVMDALAIAFTGKKENREQIENAYNVSSDLGKVSLIV 206
Query: 206 LKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGS 265
D K+ I + +RP LA R+ +K+ ++ E K DG+R+QIHK
Sbjct: 207 ATDGIDEIKKFKISLFSPIRPMLADRVQSEKDVIKKMP-EQFAAEYKLDGERVQIHKQSD 265
Query: 266 EIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA 325
+I FSR + ++Y + + I +++ V+ I + E++ + + F F QE+
Sbjct: 266 KIILFSRRLENITQYYPDIVENIGKSLNVNEGIFEAEIVPINENTGDFLPF---QELMHR 322
Query: 326 AR----DGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
R D S + FDVLY ++ ER ++L++++ + LVP
Sbjct: 323 RRKYKLDEAVSQYPITVNFFDVLYFDKKDCLNLEYSERRKILEQII--HEDNFSKLVP-- 378
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
L N +E+E F + +I EG++LK + + G R WLKL
Sbjct: 379 --------------MLFVKNENEIEDFLENSINAGCEGLMLKTPSAPYRAGTRGSNWLKL 424
Query: 442 KPEY-IRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 500
K EY G D+++IG Y+G GRR G L+A P D +P S C+VGTG
Sbjct: 425 KREYRNELGDSFDLIVIGAYFGRGRRTGLYGTLLLA-TYNPEKDNFP----SICKVGTGF 479
Query: 501 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNN-----------SKERPDVWIESPEK 549
+DE LD YQ+ +N S+ DVW E K
Sbjct: 480 TDESLD---------------------QLYQILSNNVTLKKNSRIVSEMEADVWFEP--K 516
Query: 550 SIILSITSDIR----------TIRSEVFSAPYSLRFPRID-RVRYDKPWHDCLDVQSFVE 598
++ + S+I IR S+ ++LRFP+ ++RY+K D + +
Sbjct: 517 LVLEIVGSEITLSPIHKTGLDLIRK---SSGFALRFPKFTGKIRYEKAVEDASTAEEVLA 573
Query: 599 LVHSSNGTTQK 609
L + Q+
Sbjct: 574 LYKGQSKINQE 584
>gi|303388481|ref|XP_003072475.1| DNA ligase [Encephalitozoon intestinalis ATCC 50506]
gi|303301615|gb|ADM11115.1| DNA ligase [Encephalitozoon intestinalis ATCC 50506]
Length = 589
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 216/464 (46%), Gaps = 59/464 (12%)
Query: 143 AEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF----HEFHPDAED----LFN 194
A K ++ ++ K + E K++I +I LK+G++ K++ + F D D FN
Sbjct: 137 ASKKRIILGMMVKCSPLESKYLIRLIEGRLKVGLALKTVLISLANAFSSDKADEVKAAFN 196
Query: 195 VTCDLKLVCEKLKDRNQRHKRQDIEV--GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECK 252
D+ + E + + +V G ++P LA D +A++K+ K E K
Sbjct: 197 RQPDIGRLAECILEYGVEGLPTKFQVSPGVPLKPMLANPSKDLTSAFKKVENKNFTCEYK 256
Query: 253 FDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDR-CILDGEMLVWDTSLN 311
+DG+RIQIHK G+ I FSR+ +E +++ + DR I+DGE++ +D
Sbjct: 257 YDGERIQIHKFGNRIETFSRNSEKTTE---KYPDLMDLYNISDRDFIIDGEIVAYDRKER 313
Query: 312 RFAEFGSNQEIAKAARDGLSS---DRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVK 368
+ F Q + R + S D Q+C F FD++Y + I + +ER ++L K
Sbjct: 314 KILPF---QILTTRKRKRVESSKIDVQVCVFGFDLIYFDGKTYIDEPFEERRKILHSSFK 370
Query: 369 PSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGS- 427
G+ + + + C +E E FF E++E EG+++K LGS
Sbjct: 371 EMDGKFQF------------TEFKDC-----ETPEESEMFFNESVEKGFEGMMIKILGSD 413
Query: 428 -KWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDT 485
+ P RS KW+K+K +Y+ SD LD++++G YYG G+R G FL+ + +
Sbjct: 414 ATYLPSQRSNKWIKIKKDYLEGMSDSLDLVVMGAYYGKGKRAGFYGGFLLGVY-----ND 468
Query: 486 YPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE 545
+F + C++GTG D L + +L + P Y + K PDVW+E
Sbjct: 469 EEEKFEALCKIGTGFDDNILSRLYEQLSSNL-------CSAPKNYSYKESVK--PDVWVE 519
Query: 546 SPE----KSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
+ K+ LS+ S I SLRFPR R R DK
Sbjct: 520 AKYVWEVKAAGLSL-SPIYNAGGNRNEKGISLRFPRFLREREDK 562
>gi|72390601|ref|XP_845595.1| DNA ligase I [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62358780|gb|AAX79233.1| DNA ligase I, putative [Trypanosoma brucei]
gi|70802130|gb|AAZ12036.1| DNA ligase I, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 699
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 196/427 (45%), Gaps = 51/427 (11%)
Query: 199 LKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRI 258
L+++ + N + + G V+PQLA + +GK E K+DG+R
Sbjct: 304 LEVIVPTSAEANMHARALSVRPGIPVKPQLAHPTSGVSVILDRFNGKAFTSEYKYDGERA 363
Query: 259 QIH-KNGSEIHYFSR-SFLDHSEYGHAMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFA 314
QIH S + FSR S + S+Y +S + E + VD I+D E++ D
Sbjct: 364 QIHYTRSSGVQIFSRNSETNTSKYPDIISMLPEAFSVDTVDSFIIDAEVVAVDKVTGALQ 423
Query: 315 EFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSK 371
F Q + R +S D +C FAFD+LY + ++L +R E+L KP
Sbjct: 424 AF---QVLQHRGRKNVSFDNVKVPVCVFAFDILYFNGEPQMSKTLSQRREVLHTHFKPVS 480
Query: 372 GRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKW 429
+ L +++VD+++ F I + EG+++K L S +
Sbjct: 481 TKFRF-----------------AEYLDSNDVDDIQAFLDRAIRDGTEGLMVKTLEEESTY 523
Query: 430 EPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPR 488
P RS WLKLK +Y+ +D LD++ IG YYG G+R G FL+A D
Sbjct: 524 VPAKRSHYWLKLKKDYMDGVTDTLDLVPIGAYYGKGKRTGVFGGFLLACY-----DGEGD 578
Query: 489 RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE 548
+ S C++GTG D++L+A+ L+P + P +Y+ ++++PDVW ++ +
Sbjct: 579 EYQSICKIGTGFQDDQLEAITKSLQPSILDEQ------PRYYR----TEDKPDVWFQASQ 628
Query: 549 ----KSIILSITSDIRTIRSEV-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSS 603
K+ LSI+ V S +LRFPR RVR DK H+ E+ H+
Sbjct: 629 VWEVKAADLSISPAHFAAYGLVDASKGIALRFPRFIRVREDKKVHEATSAAQVAEMYHNQ 688
Query: 604 NGTTQKG 610
+ Q+G
Sbjct: 689 S-LAQRG 694
>gi|409095358|ref|ZP_11215382.1| ATP-dependent DNA ligase [Thermococcus zilligii AN1]
Length = 559
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 162/613 (26%), Positives = 266/613 (43%), Gaps = 95/613 (15%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLD-TYCDSVDYFSALRL--ILPSLDRERGSYGLKES 68
L L+ ++KT K FL T D ++ L L + P D G K
Sbjct: 6 LSELYRGLEKTTLKTLKTRLVGDFLKKTPGDLIEVVPYLILGKVFPDWDERELGVGEK-- 63
Query: 69 VLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQ--GMISGGLTI 126
LIDA+ M+ + R I + + G+ A L+RR+ S LTI
Sbjct: 64 ----LLIDAVAMATGVPE--REIE----NSIKDTGDLGESVALALKRRKQKSFFSQPLTI 113
Query: 127 KELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE----K 179
K + D ++A ++ K+ L+ L +E K+I IL ++ G++E
Sbjct: 114 KRVYDTFVKIAEAQGEGSQDRKMKYLANLFMDAEPEEGKYIARTILGTMRTGVAEGILRD 173
Query: 180 SIFHEF--HPD-AEDLFNVTCDLKLVCEKLK-DRNQRHKRQDIEVGKAVRPQLAMRIGDA 235
+I F P+ E + +T D V + K + N+ + +I++GK +RP LA
Sbjct: 174 AIAEAFKVEPELVERAYMLTSDFGYVAKIAKLEGNEGLLKVEIQIGKPIRPMLAQNAASV 233
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVD 295
A ++ G E E K+DG R+QIHKNG ++ +SR + + + + I ++
Sbjct: 234 KEALLEMGG-EAAFEIKYDGARVQIHKNGDKVIVYSRRLENVTRSIPEVVEAIRNSLKPG 292
Query: 296 RCILDGEMLV---------WDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYV 346
R I++GE++ + L RF + +E+ + L FD+LY
Sbjct: 293 RAIVEGELVAVGNGGKPRPFQYVLRRFRRKYNIEEMMEKI--------PLELNLFDILYA 344
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
S+I ++R + RLE+ + N V+ LV +E E
Sbjct: 345 EGESLIDAPFRDRRK-----------RLESSAEE---NEKVKL----AQQLVTKKAEEAE 386
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRR 466
+F+K+ +E EG++ K L S +EPG+R KWLK+KP +LD++IIG +G G+R
Sbjct: 387 EFYKKALELGHEGLMAKRLDSVYEPGNRGKKWLKIKPTM----ENLDLVIIGAEWGEGKR 442
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
+ FLVA A D F+ +VG+G +DE+L+ LKP + E
Sbjct: 443 AHLLGSFLVA-----AYDPNRGEFVPVGKVGSGFTDEDLEEFTEMLKPLIVREE------ 491
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
F ++ P V IE + I +S + + ++LRFPR +R DK
Sbjct: 492 GKFVEI------EPRVVIEVTYQEI----------QKSPKYESGFALRFPRYVALREDKS 535
Query: 587 WHDCLDVQSFVEL 599
+ ++ EL
Sbjct: 536 PEEADTIERISEL 548
>gi|323355897|gb|EGA87709.1| Cdc9p [Saccharomyces cerevisiae VL3]
Length = 690
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 138/524 (26%), Positives = 227/524 (43%), Gaps = 84/524 (16%)
Query: 124 LTIKELNDLLDRLASSENR---AEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ E+ L +A ++ + +K+ ++ ++ E K++I + L++G++EK+
Sbjct: 194 LTVGEVFKNLRAIAKTQGKDSQLKKMKLIKRMLTACKGIEAKFLIRSLESKLRIGLAEKT 253
Query: 181 IF-------------HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEV------- 220
+ E PD + +V L+ +K++D + +I +
Sbjct: 254 VLISLSKALLLHDENREDSPDKDVPMDV---LESAQQKIRDAFCQVPNYEIVINSCLEHG 310
Query: 221 ------------GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEI 267
G ++P LA + + G+ E K+DG+R Q H N +
Sbjct: 311 IMNLDKYCTLRPGIPLKPMLAKPTKAINEVLDRFQGETFTSEYKYDGERAQXHLLNDGTM 370
Query: 268 HYFSRSFLDHSE-YGHA-MSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA 325
+SR+ + +E Y ++ I+ ILD E + WD + F Q ++
Sbjct: 371 RIYSRNGENMTERYPEINITDFIQDLDTTKNLILDCEAVAWDKDQGKILPF---QVLSTR 427
Query: 326 ARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
R + + ++C FAFD+L D +I++SLKER E L KV K G +
Sbjct: 428 KRKDVELNDVKVKVCLFAFDILCYNDERLINKSLKERREYLTKVTKVVPGEFQYAT---- 483
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWL 439
+ +N+DE++KF E++ + EG+++K L S +EP RS WL
Sbjct: 484 -------------QITTNNLDELQKFLDESVNHSCEGLMVKMLEGPESHYEPSKRSRNWL 530
Query: 440 KLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
KLK +Y+ G LD+ ++G YYG G+R G FL+ + + F + C++GT
Sbjct: 531 KLKKDYLEGVGDSLDLCVLGAYYGRGKRTGTYGGFLLGCYNQDTGE-----FETCCKIGT 585
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI--- 555
G SDE L + +L P + PK +S PDVW E +L+
Sbjct: 586 GFSDEMLQLLHDRLTPTI--IDGPKAT------FVFDSSAEPDVWFEPTTLFEVLTADLS 637
Query: 556 TSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
S I S F SLRFPR R+R DK D VEL
Sbjct: 638 LSPIYKAGSATFDKGVSLRFPRFLRIREDKGVEDATSSDQIVEL 681
>gi|325558126|gb|ADZ29507.1| DNA ligase [Cowpox virus]
Length = 552
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 143/584 (24%), Positives = 258/584 (44%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ + + + LT++E++ L L+S+ +
Sbjct: 73 EDMLQDLGY--GYIGDTISTFFKENTEIRPKDKSI----LTLEEVDSFLTTLSSATKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P+A D+F + +LK + E
Sbjct: 127 QIKLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPNAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+N I V + P LA + A++K + E K+DG+R+Q+HK
Sbjct: 187 NASKQNL--DSISISVMTPINPMLAESCDSVNTAFKKFPSG-MFAEVKYDGERVQVHKKN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + ILD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIILDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +LK + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRVLQDQLK-MIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|71001108|ref|XP_755235.1| DNA ligase Cdc9 [Aspergillus fumigatus Af293]
gi|66852873|gb|EAL93197.1| DNA ligase Cdc9, putative [Aspergillus fumigatus Af293]
gi|159129320|gb|EDP54434.1| DNA ligase Cdc9, putative [Aspergillus fumigatus A1163]
Length = 909
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 145/567 (25%), Positives = 251/567 (44%), Gaps = 87/567 (15%)
Query: 103 GNFPMVAAEVLQRRQGMISGG-LTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNA 158
G+ +VAA+ + M LT++ +++ L +A + + +KIS + L+
Sbjct: 377 GDLGLVAAKSRSNQPTMFKPKPLTVRGVHEGLIAIAKIQGQGSQDKKISAIKKLL----- 431
Query: 159 QEMKWIIMIILKDLKLGISEKSIF---------HEFH------PDAEDLFNVTCDLKLVC 203
E K+I+ + L+LG++EK++ HE P E + LK V
Sbjct: 432 -EAKFIVRFLEGKLRLGLAEKTVLVALAQAVVAHEAAVRGEKTPSPEKMAQGEAVLKTVY 490
Query: 204 EKLKDRN------------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIEC 251
+L K ++ G ++P LA + GK E
Sbjct: 491 SELPAYEVIIPAMLEHGLFNLPKVCKLQPGIPIKPMLAKPTKSITEVLNRFEGKNFTCEY 550
Query: 252 KFDGDRIQIHKNGSEIH-YFSRSFLDHSE-YGHAMSKIIEQNVL--VDRCILDGEMLVWD 307
K+DG+R QIH + + FSR+ D S+ Y ++K+ E V V +LD E + WD
Sbjct: 551 KYDGERAQIHYDSKGLSAIFSRNSEDLSKKYPDVLAKL-ETWVKDGVKSFVLDCETVAWD 609
Query: 308 TSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQK 365
T + F Q + + +D + D ++ C FAFD+L++ + ++L+ER ELL K
Sbjct: 610 TVNKKVLPF--QQLMTRKRKDVKAEDVKVKVCIFAFDLLFLNGEPTVKKTLRERRELLHK 667
Query: 366 VVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL 425
+ +G + HG ++++E++ E+++ EG+++K L
Sbjct: 668 SFEVVEGEFQ--FAQHGDT---------------NDLEEIQNLLDESVKASCEGLMVKML 710
Query: 426 G---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERP 481
S +EP RS WLK+K +Y+ G LD++++G YYG G+R FL+A
Sbjct: 711 DTEESGYEPSKRSRNWLKVKKDYLAGVGDSLDLVVLGAYYGRGKRTSVYGAFLLA----- 765
Query: 482 APDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPD 541
A ++ + + + C +GTG S+ L+ + +L P + PK FY +N K++PD
Sbjct: 766 AYNSSTQTYETICNIGTGFSEALLEELYKELSPL--TIDRPK----PFYSHSNVPKDQPD 819
Query: 542 VWIES----PEKSIILSITSDIRTIRSEVFSAP-----YSLRFPRIDRVRYDKPWHDCLD 592
VW E K+ L+++ + E SLRFPR + R DK
Sbjct: 820 VWFEPRLVWEVKTADLTLSPRYKAAADEFVGTAGGGKGVSLRFPRFIKSRDDKKPEQATT 879
Query: 593 VQSFVELVHSSNGTTQKGKEYGGLQDD 619
++ E+ ++ GG+ DD
Sbjct: 880 TRAVAEMYRKQEAVLKENTSKGGVDDD 906
>gi|374632962|ref|ZP_09705329.1| ATP-dependent DNA ligase I [Metallosphaera yellowstonensis MK1]
gi|373524446|gb|EHP69323.1| ATP-dependent DNA ligase I [Metallosphaera yellowstonensis MK1]
Length = 599
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 129/502 (25%), Positives = 239/502 (47%), Gaps = 61/502 (12%)
Query: 122 GGLTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE 178
G L + E+ + L ++A S +R KI + + L+KK + E K+++ + L+LGI +
Sbjct: 118 GSLDVLEVYNELVKIAESSGEGSRDIKIRIFAGLLKKASPLEAKYLVRFVEGRLRLGIGD 177
Query: 179 KSIF----------HEFHPDAEDLFNVTCDLKLVCEKL-KDRNQRHKRQDIEVGKAVRPQ 227
++ ++ P E +N+ DL + + K+ ++ K G +RP
Sbjct: 178 ATVLDALALTFGGSSDYRPIVERAYNLRADLGEIARVIAKEGIEKLKSVIPTPGIPIRPM 237
Query: 228 LAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKI 287
LA R+ D K+ GK +V + K+DG+R QIH+N ++ FSR + ++ + +
Sbjct: 238 LAERLSDPAEILDKVGGKALV-DYKYDGERAQIHRNKDKVFIFSRRMENITDQYVDVVEY 296
Query: 288 IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR--DGLSSDRQ--LCYFAFDV 343
+ + + D I++GE++ D F QE+ R D + R+ + + FD+
Sbjct: 297 VTRYLKGDDFIVEGEIVPVDPESGEMRPF---QELMHRRRKNDIHEAIREYPVNLYLFDL 353
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
+Y G + L R + L++++ + + + +H ++ +VD
Sbjct: 354 IYYGGKDYTVEPLPARRQKLEEIIAEND---KVKIAEH---------------MLTDSVD 395
Query: 404 EVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGY 460
++ ++F + I EG+++K +G S ++ G R W+KLK +Y +D +D++I+G +
Sbjct: 396 KLTEYFHQAISEGAEGVMVKSVGPNSVYQAGSRGWLWIKLKKDYQSEMADTVDLVIVGAF 455
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
YG G+RGG+ + L+A A P D F + C+V +G SD+ELD + +K+ R
Sbjct: 456 YGKGKRGGKFSSLLMA-AYNPDKDV----FETVCKVASGFSDQELDEMQSKISELKRSER 510
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS---ITSDIRTIRSEVFSAPYSLRFPR 577
+P+ S+ PDVW+ + I+ S + T E S+RFPR
Sbjct: 511 HPRVV----------SEMVPDVWVTPALVAEIIGAEITISPLHTCCRETGKGGLSIRFPR 560
Query: 578 IDRVRYDKPWHDCLDVQSFVEL 599
R R DK D + +E+
Sbjct: 561 FIRWRPDKSPEDATTTKEIMEM 582
>gi|18640216|ref|NP_570290.1| SPV130 DNA ligase-like ptorein [Swinepox virus]
gi|18448623|gb|AAL69869.1| SPV130 DNA ligase-like ptorein [Swinepox virus]
Length = 559
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 152/594 (25%), Positives = 257/594 (43%), Gaps = 67/594 (11%)
Query: 19 IQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDAL 78
I T +K + F+ Y D Y ++++LP +D++ Y L + L I +
Sbjct: 16 IADTTKYLEKTDHIKTFISKYDDDNKYI-IIKMLLPMIDKK--IYHLNDLQLIK--IFSR 70
Query: 79 GMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLAS 138
+ DS + L + KG A +F + ++ + I L + +++ L+ L+
Sbjct: 71 LFNHDSK--LMLEDLEKGYIASTIKSFFESSNSDIKPIKSSI---LLLNDVSMFLNHLSK 125
Query: 139 SENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCD 198
+++ L + K ++K I+ I DL++ K + +A D F
Sbjct: 126 LSKENDQMDFLKMISKVCTGNDLKCFILFIKNDLQIKAGVKCVLDALDNNAYDYFKQ--- 182
Query: 199 LKLVCEKLKD-----RNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKF 253
C LKD N+ I V+P LA A+ K + + E K+
Sbjct: 183 ----CHNLKDIIYCVLNKSLNNVSILPMTPVKPMLAEICKSTDVAFEK-YTNGLYAEIKY 237
Query: 254 DGDRIQIHKNGSEIHYFSRSFLDHSEY-----GHAMSKIIEQNVLVDRCILDGEMLVWDT 308
DG+R+QIHK + Y+SR+ S Y +SK ILD E+++ D
Sbjct: 238 DGERVQIHKQNNTYVYYSRNLKQVSTYKIEGFDDCLSKAFPT---AKNFILDAELILVDK 294
Query: 309 SLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVK 368
N F FGS A+ + S C F FD LY D S+IH+ +R +L++ +
Sbjct: 295 KTNNFLPFGSLGVHKMASYENSSR----CLFIFDCLYFNDESIIHKHFIKRRQLIRDNIY 350
Query: 369 PSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK 428
+ ++ + S +R + DE++ F K+ I+ EG+VLK L
Sbjct: 351 EIRHKI--------MLSDIRCINKK---------DELDTFIKDVIQKGLEGLVLKGLYDS 393
Query: 429 WEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDT 485
++PG++ WLK+K +YI GS +D++++G YYG G RGG + FL+ + P+
Sbjct: 394 YKPGNKG--WLKIKKDYILNGSIADSVDLVVLGSYYGKGSRGGIQSIFLMGCYD---PND 448
Query: 486 YPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE 545
+ ++ C +G +E L + +L + K A +T N PD ++
Sbjct: 449 CKWKTVTKC---SGHDEETLKQIQEELDVI----KISKDASKIPKWLTINKAYYPDFIVK 501
Query: 546 SPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
P S + IT T S+ + S+RFPR R+R DK W ++Q L
Sbjct: 502 DPRSSPVWEITGSGFTSSSQHTANGISIRFPRFARIRNDKNWISATNLQELEHL 555
>gi|154278200|gb|ABS72370.1| DNA ligase [Sulfophobococcus zilligii]
Length = 606
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 143/504 (28%), Positives = 236/504 (46%), Gaps = 65/504 (12%)
Query: 123 GLTIKELNDLLDRLASSENRAEK---ISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEK 179
GLT+ + L ++A ++ K I +L+ L+K + +E K+I+ + L++GI +
Sbjct: 123 GLTVTNTYNTLVKIAMAQGEGSKDLKIRLLAGLLKDASPKEAKFIVKFVEGKLRVGIGDA 182
Query: 180 SIFHEF----------HPDAEDLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQL 228
+I P E +N+ DL V + L + + K+ EVG +RP L
Sbjct: 183 TIMDALAVTFGGGVANRPVIERAYNLRSDLGEVAKILASKGIEELKKIKPEVGVPIRPML 242
Query: 229 AMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLD-HSEYGHAMSKI 287
A R+ D K G E +E K+DG+R QIHK G +I +SR + S+Y + +
Sbjct: 243 AERLSDPREILVKTGG-EAFVEYKYDGERAQIHKKGDKIWIYSRRLENITSQYPDVVERA 301
Query: 288 IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARD----GLSSDRQLCYFAFDV 343
+E+ + D I++GE++V+D F QE+ R + + F FD+
Sbjct: 302 LEK-IKADEAIVEGEIVVYDPDTGELKPF---QELMHRKRKHDIRQAIKEYPVKVFLFDL 357
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
LY+ + L R E L+K++ ++ D + +++ N +
Sbjct: 358 LYLNGEDYTLKPLPVRREALEKIIDKTE--------DFTIAEYIK----------TSNPE 399
Query: 404 EVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGY 460
E+EKFF E I N EG++ K + S ++ G R W+K K +Y +D +D++++G +
Sbjct: 400 ELEKFFLEAIGNGVEGVMAKAIHKDSIYQAGVRGWLWIKYKRDYKSEMADTVDLVVVGAF 459
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
YG GRRGG+ L+A A + F + C+VG+G DE+LD + LKPY R +
Sbjct: 460 YGKGRRGGKYGALLMA-----AYNKEKDVFETVCKVGSGFKDEDLDKLPDMLKPYIRDRK 514
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS---ITSDIRTIRSEVFS--APYSLRF 575
+P+ ++ PDVW++ + I+ S I T V A S+RF
Sbjct: 515 HPRVV----------AEIEPDVWVDPVLVAEIIGAELTLSPIHTCAKGVIKPDAGISIRF 564
Query: 576 PRIDRVRYDKPWHDCLDVQSFVEL 599
PR R R DK D VE+
Sbjct: 565 PRFIRWRPDKRPEDATTSSELVEM 588
>gi|256074244|ref|XP_002573436.1| DNA ligase I [Schistosoma mansoni]
gi|350645178|emb|CCD60120.1| DNA ligase I, putative [Schistosoma mansoni]
Length = 783
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 178/712 (25%), Positives = 296/712 (41%), Gaps = 140/712 (19%)
Query: 5 EETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRL---ILPSLDRERG 61
E + L F I+ A R K + L + SV S+ L + L+R
Sbjct: 113 ESVPYLSLARTFECIE----ATSGRIKITEILCNFFRSVGLLSSFDLTSCVYLCLNRLGP 168
Query: 62 SY-GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMI 120
+Y G++ V L+ AL + V + + R + G+ VA E ++ RQ ++
Sbjct: 169 AYEGMELGVGETILLKALA----ATTGVGIEHMR--SSLKQHGDLGAVA-ETIRSRQKIL 221
Query: 121 SGG--LTIKELNDLLDRLAS-SENRAE--KISVLSTLIKKTNAQEMKWIIMIILKDLKLG 175
S LTI + L +AS S N A+ K+ ++ +L+ E K+II + L++G
Sbjct: 222 SAPKPLTISSVFSKLKDIASMSGNSAQNKKMEIIRSLLVACRESETKYIIRSLSGKLRIG 281
Query: 176 ISEKSIFHE---------FHPDAED---------------LFNVTCDLKL--------VC 203
++E+++ FH D + VT D+ + VC
Sbjct: 282 LAEQTVLTALGQAVAMTPFHFKVSDKSTRIINASNGMSSEQWKVTMDIAVANVKRAYCVC 341
Query: 204 EKLKDR-----NQRHKRQD----IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFD 254
+ H+ D I G ++P LA + ++ + E K+D
Sbjct: 342 PDYSRLIKALLTKSHESLDQICTITPGIPLKPMLASPTHGIYEILKRFEECDFTCEYKYD 401
Query: 255 GDRIQIH--KNGSEIHYFSRSFLDHSE-----YGHAMSKIIEQNVL-------------- 293
G+R QIH +G+ H +SR+ D++ + MS+++ ++ L
Sbjct: 402 GERAQIHILPSGAS-HVYSRNQEDNTTKYPDIVNNLMSRVLPESKLTPHAIELLSEIVKD 460
Query: 294 --------------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYF 339
++ CI+D E++ WD F + D + Q+C +
Sbjct: 461 NKIQVQSNGIVGNKLESCIIDSEVVAWDRLAGHILPFQVLSTRKRKDVDESTLKVQICIY 520
Query: 340 AFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVA 399
FD+L++ S+I Q L+ R E+L++V G SL +
Sbjct: 521 VFDILFINGISLIEQPLRIRREILREVFPRISGEFMMAT-----------------SLDS 563
Query: 400 HNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 456
+ DE+ F E I+ EG+++K L S +E RS WLKLK +Y+ G LD+++
Sbjct: 564 SDTDEIATFLDEAIKGNCEGLMIKTLDRNSTYEIAKRSHSWLKLKKDYLEGVGDTLDLVV 623
Query: 457 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 516
IGG+YG+G+R G +L+A + PDT + + C++GTG+ D+EL +F
Sbjct: 624 IGGFYGTGKRAGRYGGYLLACYD---PDT--EEYQTICKIGTGMKDDEL----ASFSEFF 674
Query: 517 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSAP-- 570
+ + K P +YQ T + PD W E + K+ LSI+ + + P
Sbjct: 675 KNHATDKAKP--YYQYTISLI--PDQWFEPVQVWEVKAADLSISPGHKAAAG--LADPQK 728
Query: 571 -YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGT-TQKGKEYGGLQDDK 620
SLRFPR R+R DK D Q EL + Q G + G DD+
Sbjct: 729 GISLRFPRFVRIRDDKKPEDATTAQQVYELYQNQEQIKNQHGNKQTGNNDDE 780
>gi|325558773|gb|ADZ30151.1| DNA ligase [Cowpox virus]
Length = 554
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 142/582 (24%), Positives = 259/582 (44%), Gaps = 54/582 (9%)
Query: 27 KKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSAD 86
K++SK + T D+ + + ++L+LP LD + K+ + +I + D
Sbjct: 21 KEKSKLIRDFITDRDATNTYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQED 76
Query: 87 AVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKI 146
++ + + G F E+ + + + LT++E++ L L+S + +I
Sbjct: 77 MLQDLGY--GYIGDTISTFFKENTEIRPKDKSI----LTLEEVDSFLTTLSSVTKESHQI 130
Query: 147 SVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKL 206
+L+ + ++K ++M+I KDLK+ + + + P+A D+F + +LK + E
Sbjct: 131 KLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPNAYDVFRKSNNLKEIIENA 190
Query: 207 KDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSE 266
+N I V + P LA + A++K + E K+DG+R+Q+HKN +E
Sbjct: 191 SKQNL--DSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNNNE 247
Query: 267 IHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIA 323
+FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 248 FAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS----L 301
Query: 324 KAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGL 383
+ + +C F FD LY + L ER L+ V+ +P+ +
Sbjct: 302 GIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNRIV 353
Query: 384 NSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKP 443
S + N ++ + + + EG+VLKD+ +EPG R +WLK+K
Sbjct: 354 FSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKR 402
Query: 444 EYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 500
+Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +G
Sbjct: 403 DYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGH 456
Query: 501 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIR 560
D L + +L + + PK+ P + N PD +E P++S I I+
Sbjct: 457 DDNTLRVLQDQL-TMVKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEF 512
Query: 561 TIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 513 TSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 554
>gi|342181689|emb|CCC91169.1| putative DNA ligase I, partial [Trypanosoma congolense IL3000]
Length = 710
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 194/405 (47%), Gaps = 50/405 (12%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSE-IHYFSR-SFLDHS 278
G V+PQLA + +GK E K+DG+R QIH + + FSR S +
Sbjct: 334 GLPVKPQLAHPTSGISVILNRFNGKSFTSEYKYDGERAQIHYTKEKGVQIFSRNSETNTG 393
Query: 279 EYGHAMSKIIE--QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR-- 334
+Y +S + E + VD I+D E++ D+ F Q + R +SSD
Sbjct: 394 KYPDIVSLLPEVFSSDTVDSFIIDSEVVAVDSVTGALQAF---QVLQHRGRKNVSSDSVT 450
Query: 335 -QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEP 393
+C FAFD+LY ++ +SL +R ++L +P + R + +H
Sbjct: 451 IPVCVFAFDILYFNGEPLMTKSLAQRRDVLHTHFRPIQARFQ--FAEH------------ 496
Query: 394 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD 451
L +++VD+++ F I++ EG+++K L + + P RS WLKLK +Y+ +D
Sbjct: 497 ---LDSNDVDDIQTFLDRAIKDGTEGLMVKTLEEEATYVPAKRSHFWLKLKKDYMDGVTD 553
Query: 452 -LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVT 510
LD++ IG YYG G+R G FL++ DT + S C++GTG DE+L+++
Sbjct: 554 TLDLVPIGAYYGKGKRTGVFGGFLLSCY-----DTESDEYQSICKIGTGFQDEQLESITK 608
Query: 511 KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV 566
L + + P +Y+ + ++PDVW+++ + K+ LSI+ V
Sbjct: 609 SLGASVLEDQ------PRYYR----TDDKPDVWLQASQVWEVKAADLSISPAHFAAYGLV 658
Query: 567 -FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG 610
S +LRFPR RVR DK H+ E+ H+ + + G
Sbjct: 659 DASKGIALRFPRFVRVREDKKAHEATSAMQVAEMYHNQSLAQKNG 703
>gi|145547864|ref|XP_001459613.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427439|emb|CAK92216.1| unnamed protein product [Paramecium tetraurelia]
Length = 680
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 145/538 (26%), Positives = 252/538 (46%), Gaps = 89/538 (16%)
Query: 124 LTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ ++ + L +L E EK +L+ L++ E K+II I K+LK+G +EK+
Sbjct: 183 LTMIQVFNTLQQLQKQEGTGSSLEKERILTGLLRMAKPIEAKYIIRFIEKNLKIGAAEKT 242
Query: 181 I-------FHEFHP-----DAEDLFNVTCDLKLVCE------------KLKDRNQRHKRQ 216
+ F +H D E + N + +CE ++ + +
Sbjct: 243 MQAALARAFQLYHKGNVEGDYESIIN-----QALCECPNYKKIIDTLFSIQSLKEVPELC 297
Query: 217 DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLD 276
I G +P LA + +++ + E K+DG R QIH ++ FSR+ +
Sbjct: 298 HIIPGVPCKPMLAKPMKSIQMIFQRFENMKFTCEYKYDGLRGQIHFENGQVSIFSRNLEN 357
Query: 277 HSE-YGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQ 335
++ Y ++ + +D I+D E++ +D + NR F + AK D + Q
Sbjct: 358 MTQTYPDIVNYVHTHYQHLDGFIIDSEIVAYDVANNRILPFQTLTSRAKKNVDQNQIEIQ 417
Query: 336 LCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW 395
+C + FD+LY+ S + ++L++R + L++ K +G+L+
Sbjct: 418 VCLYIFDLLYLNKQSYLKETLEKRRQTLRETFKEEEGKLKFAT----------------- 460
Query: 396 SLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAG-SD- 451
S + N +E+E+F +I+ EG+++K L S++EP RS WLKLK +Y+ G SD
Sbjct: 461 SRDSENFEEIEEFLLNSIKMGCEGLMIKTLEINSQYEPAKRSFNWLKLKKDYLDNGLSDT 520
Query: 452 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 511
D++ IG YG+G+R G +L+A D Y + C++GTG SDE L+ K
Sbjct: 521 FDLVPIGACYGTGKRKGFYGSYLLACYNEDM-DQYE----TTCKIGTGFSDENLE----K 571
Query: 512 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS-DIRTIRSEVFSAP 570
+F++Y P P S Y+ + DVW SP ++ I S DI+ S ++SA
Sbjct: 572 FFQFFQEYLIPH--PLSEYKCDGVNM---DVWF-SP--VVVWEIKSADIQI--SPIYSAC 621
Query: 571 YS----------LRFPRIDRVRYDKPWHDCLDVQSFVEL-----VHSSNGTTQKGKEY 613
+ LRFPR+ +VR DK ++ Q ++ V +SN T ++ ++
Sbjct: 622 STILQLNNKGVGLRFPRLIKVREDKKPNEATSSQFLYDVYKQQAVVASNNTFEQDDDF 679
>gi|344301030|gb|EGW31342.1| hypothetical protein SPAPADRAFT_56206 [Spathaspora passalidarum
NRRL Y-27907]
Length = 715
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 138/511 (27%), Positives = 235/511 (45%), Gaps = 83/511 (16%)
Query: 135 RLASSENRAEKISVLSTLIK----KTNAQEMKWIIMIILKDLKLGISEKSIF-------- 182
R +++++KI +++ ++ KTN E K++I + L++G++EK++
Sbjct: 234 RSTGKDSQSKKIGIINKMLTACDPKTN--EAKFLIRSLEGKLRIGLAEKTVLIALAQAFV 291
Query: 183 -----HEFHPD----AEDL----FNVTCDLKLVCEKLKDRNQRHKRQDIEV--GKAVRPQ 227
H+ H D AED+ F+ + +++ + + + + + G V+P
Sbjct: 292 NHEKKHKVHADELSKAEDIIREAFSQIPNYEVIIKNASEHGVFNLLDHVRLTPGIPVKPM 351
Query: 228 LAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHSE-YGHAMS 285
LA + +E E K+DG+R Q+H + + +SR+ D S+ Y +S
Sbjct: 352 LAKPTKSIGEVLDRFQHEEFTCEYKYDGERAQVHVLPDASVRIYSRNSEDMSQRYPDLIS 411
Query: 286 KIIE--QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFA 340
I E + + ILD E + WD N+ F Q ++ R ++ +C FA
Sbjct: 412 IITEFSKQQELHSMILDCEAVAWDRVQNKILPF---QVLSTRKRKDVNEKDITVHICLFA 468
Query: 341 FDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAH 400
FD++Y S+I +SL ER E+L +G+ + +
Sbjct: 469 FDLIYYNGESLITKSLAERREVLYNNFTTIEGKFQFATKKD-----------------SS 511
Query: 401 NVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 456
N+DE++ F +++++ EG+++K L S +EP RS WLKLK +Y+ G LD+++
Sbjct: 512 NLDELQLFLDQSVKDSCEGLMVKMLNGTESFYEPSKRSRNWLKLKKDYLAGVGDSLDLVV 571
Query: 457 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 516
IG Y G G+R G FL+A + + + + C++GTG SDE+L + KL P
Sbjct: 572 IGAYNGRGKRTGTYGGFLLASYNQDSGE-----LETTCKIGTGFSDEDLTNLYNKLHP-- 624
Query: 517 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI-TSDIRTIRSEVFSAPY---- 571
E P P Y T NS PDVW E S++ + T+D+ S ++ A +
Sbjct: 625 --TEIPNPRPHFVYDST-NSNAAPDVWFEP---SLLFEVLTADLSL--SPIYKAAHTEYG 676
Query: 572 ---SLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
SLRFPR R+R DK D E
Sbjct: 677 KGISLRFPRFLRIRDDKGIEDATSSTEVAEF 707
>gi|167412705|gb|ABZ80139.1| DNA ligase [Vaccinia virus GLV-1h68]
Length = 552
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 144/584 (24%), Positives = 257/584 (44%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT++E++ L L+S +
Sbjct: 73 EDMLQDLGY--GYIGDTIRTFFKENTEIRPRDKSI----LTLEEVDSFLTTLSSVTKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P+A D+F + +LK + E
Sbjct: 127 QIKLLTDVASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPNAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
Q I V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 --NSSKQNLDSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +LK + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRELQDQLK-MIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|341582659|ref|YP_004763151.1| ATP-dependent DNA ligase [Thermococcus sp. 4557]
gi|340810317|gb|AEK73474.1| ATP-dependent DNA ligase [Thermococcus sp. 4557]
Length = 559
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 131/498 (26%), Positives = 222/498 (44%), Gaps = 82/498 (16%)
Query: 124 LTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE-- 178
LTIK + D ++A + + K+ L+ L +E K++ +L ++ G++E
Sbjct: 111 LTIKRVYDTFMKIAEASGQGSQDRKLKYLANLFMDAQPEEGKYLARTVLGTMRTGVAEGL 170
Query: 179 --KSIFHEFHPDAEDL---FNVTCDLKLVCEKLK-DRNQRHKRQDIEVGKAVRPQLAMRI 232
+I F AE + + +T D V K + N+ + I+VGK +RP LA
Sbjct: 171 MRDAIASAFGVKAELVERAYMLTSDFGYVARVAKLEGNEGLSKVRIQVGKPIRPMLAQNA 230
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNV 292
+ A ++ GK E K+DG R+Q+HK+G + +SR + + + + ++V
Sbjct: 231 ANVKEALVEMGGK-AAFEVKYDGARVQVHKDGDRVVIYSRRLENVTRSIPEVVDAVLESV 289
Query: 293 LVDRCILDGEMLV---------WDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDV 343
++ I++GE++ + L RF + +E+ + L FDV
Sbjct: 290 KPEKAIVEGELVAVGEGGKPRPFQYVLRRFRRKYNIEEMVEKI--------PLELNLFDV 341
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
LYV +I ER + L++++ N +R LV + D
Sbjct: 342 LYVDGDGMIDTPFSERRKKLEEIISQ--------------NERIRL----AEQLVTTSAD 383
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGS 463
E E+F++ +E EG++ K L S +EPG+R KWLK+KP DLD++IIG +G
Sbjct: 384 EAEEFYQRALELGHEGLMAKRLDSVYEPGNRGKKWLKIKPTM----EDLDLVIIGAEWGE 439
Query: 464 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE--Y 521
GRR + FLVA A D + F+ +VG+G +DE+L LKP + E Y
Sbjct: 440 GRRAHLLGSFLVA-----AFDPHSGEFVPVGKVGSGFTDEDLAEFTRMLKPLIVREEGKY 494
Query: 522 PKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRV 581
+ P QVT ++ SP+ + + ++LRFPR +
Sbjct: 495 VEIEPKVVIQVTYQEIQK------SPK------------------YESGFALRFPRYVAL 530
Query: 582 RYDKPWHDCLDVQSFVEL 599
R DK + ++ +L
Sbjct: 531 REDKSPEEADTIERIAQL 548
>gi|330790648|ref|XP_003283408.1| hypothetical protein DICPUDRAFT_25751 [Dictyostelium purpureum]
gi|325086673|gb|EGC40059.1| hypothetical protein DICPUDRAFT_25751 [Dictyostelium purpureum]
Length = 648
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 203/424 (47%), Gaps = 60/424 (14%)
Query: 214 KRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFS 271
K + VG V+P LA + E E K+DG+R QIH ++GS +H ++
Sbjct: 261 KTCSLNVGIPVKPMLAQPTTGITQMLDRFTDMEFTCEFKYDGERAQIHYLEDGS-VHIYT 319
Query: 272 RSFLDHS----EYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR 327
R+ D++ + + K I NV ILD E + +D + + F Q ++ AR
Sbjct: 320 RNLEDYTGKYPDIAANVKKFIGPNV--KSFILDCEAVAFDKATKKILSF---QVLSTRAR 374
Query: 328 DGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLN 384
+ D+ +C FAFD+L++ ++I++ +R E++ +E VP G+
Sbjct: 375 KSVQLDQIKVPVCVFAFDLLFLNGKNLINEPFYKRREVM----------VENFVPSDGVF 424
Query: 385 SHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLK 442
S + +V++++ + +E +E EG+++K L K +EP RS WLK+K
Sbjct: 425 SFAKYAN-------ISDVNDIQSYLEEAVEGNCEGLMVKTLKEKSIYEPSRRSYNWLKIK 477
Query: 443 PEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLS 501
+Y++ +D LD++ IG +YG G+R G +L+A D F + C++GTG S
Sbjct: 478 KDYMQGMTDSLDLVPIGAWYGKGKRTGTYGAYLLACY-----DEDNEEFQTLCKIGTGFS 532
Query: 502 DEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRT 561
D++L + +LKP+ P + ++++++ K PDVW+ + +L+ I
Sbjct: 533 DKDLSSFTEQLKPHVI------NQPRNMFRISDSIK--PDVWLSPSQVWEVLAADLSISP 584
Query: 562 IRSEVF-----SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELV-------HSSNGTTQK 609
+ + + + +LRFPR R R DK D + V + H+S QK
Sbjct: 585 VHTAAYGNLESNKGIALRFPRFIRTREDKSPEDATSSEQVVLMYQNQKINNHNSESKPQK 644
Query: 610 GKEY 613
++Y
Sbjct: 645 DEDY 648
>gi|56404443|sp|O57250.1|DNLI_VACCA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|2772802|gb|AAB96541.1| DNA ligase [Vaccinia virus]
gi|47088491|gb|AAT10561.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 144/584 (24%), Positives = 257/584 (44%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT++E++ L L+S +
Sbjct: 73 EDMLQDLGY--GYIGDTIRTFFKENTEIRPRDKSI----LTLEEVDSFLTTLSSVTKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+N I V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 NASKQNL--DSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +LK + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRELQDQLK-MIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|302847056|ref|XP_002955063.1| ATP-dependent DNA ligase [Volvox carteri f. nagariensis]
gi|300259591|gb|EFJ43817.1| ATP-dependent DNA ligase [Volvox carteri f. nagariensis]
Length = 648
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 166/642 (25%), Positives = 282/642 (43%), Gaps = 109/642 (16%)
Query: 30 SKFRKFLDTYCDSVDYFSALRLILPSLDRERGSY-----GLKESVLANCLIDALGMSKDS 84
+ FR LDT + D A+ L ++R S+ G+ E+ L L +A G K+
Sbjct: 59 AAFRAVLDT--NPPDLLPAVYL---CVNRVAPSHTGIELGIGEATLIKALCEATG--KNE 111
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGG-LTI----KELNDLLDRLASS 139
A + A +G+ +VA ++ M + LTI K D+ ++A S
Sbjct: 112 AGIKK--------AYEASGDLGVVAVGARSTQRTMFTPPPLTIANVLKGFRDIA-QVAGS 162
Query: 140 ENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF----HEFHPDAEDLFNV 195
++ K ++ ++ E +II + L++G++E+S+ H H E + +
Sbjct: 163 KSVDIKRGMIVKMLVAAKGNEPGYIIRSLQAKLRIGLAEQSVLVALAHAVHLHREGVKDK 222
Query: 196 TCDLKLVCEKLKDRNQRHKRQDIEV--------------------------GKAVRPQLA 229
L EKL+ Q K+ E G V+P LA
Sbjct: 223 DGRL---AEKLEAAAQVVKQAYSECPSYDVLIPALLEQGTADLLSRCHFMPGVPVKPMLA 279
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHS-EYGHAMSK 286
K E +E K+DG+R Q+H + G +H FSR+ +++ +Y +++
Sbjct: 280 KPTTGVGEVLEKFTDTEFTVEYKYDGERAQVHVMEGGKTVHIFSRNAENNTPKYPDIVAR 339
Query: 287 IIEQNVL---VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFA 340
+ + +L V + D E + +D + F Q ++ AR +S Q+ FA
Sbjct: 340 L--RGLLKPHVQSIVFDSEAVAYDPEKKKILPF---QVLSTRARKDVSVGEIKVQVVLFA 394
Query: 341 FDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAH 400
FD LY+ S++H+ L ER E L + +G+L+ + +
Sbjct: 395 FDCLYLNGESLLHKPLTERREALYGALMEKEGQLQF-----------------ATAKTSR 437
Query: 401 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGG 459
+V+E+E F E++E EG+++K L +EP RS WLKLK +Y+ G DV+ +G
Sbjct: 438 DVEELESFLTESVEAGTEGLIVKTLADTYEPSKRSSHWLKLKKDYMEGVGDTFDVVPLGA 497
Query: 460 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
+YG G+R G +L+ + + PDT + IS ++GTG S+E+L + ++P+
Sbjct: 498 FYGKGKRTGFFGAYLLGVYD---PDTETYQTIS--KLGTGFSEEQLQQLADSMRPHI--- 549
Query: 520 EYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV-FSAPYSLR 574
P+ P +Y+ ++ PDVW ++ K+ LSI+ + V S S+R
Sbjct: 550 -IPQ--PRPYYKWSDAL--VPDVWFDAVAVWEVKAADLSISPVHKAAVGLVDPSKGISIR 604
Query: 575 FPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGL 616
FPR+ RVR DK D E+ S Q+ YG L
Sbjct: 605 FPRLIRVREDKSPEDATSAAQVAEMFRSQAVIKQQQVGYGCL 646
>gi|373448794|gb|AEY74174.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 144/584 (24%), Positives = 256/584 (43%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT++E++ L L+S +
Sbjct: 73 EDMLQDLGY--GYIGDTIRTFFKENTEIRPRDKSI----LTLEEVDSFLTTLSSVTKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+N I V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 NASKQNL--DSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + + + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYDDKSG---KWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +LK + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRELQDQLK-MIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|373448081|gb|AEY73464.1| DNA ligase [Vaccinia virus]
gi|373449036|gb|AEY74415.1| DNA ligase [Vaccinia virus]
gi|373449265|gb|AEY74643.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 144/584 (24%), Positives = 256/584 (43%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + R G F E+ R + + LT+++++ L L+S
Sbjct: 73 EDMLQ--DLRYGYIGDTISTFFKENTEIRPRDKSI----LTLEDVDSFLTTLSSVTKELH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDVASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+N I V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 NASKQNL--DSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +LK + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRELQDQLK-MIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|439966019|gb|AGB75893.1| ATP-dependent DNA ligase [Vaccinia virus]
Length = 552
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 144/584 (24%), Positives = 257/584 (44%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT++E++ L L+S +
Sbjct: 73 EDMLQDLGY--GYIGDTIRTFFKENTEIRPRDKSI----LTLEEVDSFLTTLSSVTKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDVASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+N I V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 NASKQNL--DSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +LK + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRELQDQLK-MIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|373447363|gb|AEY72749.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 143/584 (24%), Positives = 257/584 (44%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT+++++ L L+S +
Sbjct: 73 EDMLQDLGY--GYIGDTISTFFKENTEIRPRDKSI----LTLEDVDSFLTTLSSVTKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+N I V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 NASKQNL--DSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +LK + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRELQDQLK-MIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|160858060|emb|CAM58348.1| ATP-dependent DNA ligase [Vaccinia virus Ankara]
Length = 552
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 144/584 (24%), Positives = 256/584 (43%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT++E++ L L+S +
Sbjct: 73 EDMLQDLGY--GYIGDTIRTFFKENTEIRPRDKSI----LTLEEVDSFLTTLSSVTKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
Q I V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 --NSSKQNLDSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +LK + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRELQDQLK-MIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|37551621|gb|AAQ93273.1| DNA ligase [Vaccinia virus]
gi|373449747|gb|AEY75123.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 144/584 (24%), Positives = 256/584 (43%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + R G F E+ R + + LT+++++ L L+S
Sbjct: 73 EDMLQ--DLRYGYIGDTISTFFKENTEIRPRDKSI----LTLEDVDSFLTTLSSVTKELH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDVASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+N I V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 NASKQNLDF--ISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +LK + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRELQDQLK-MIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|18640405|ref|NP_570561.1| CMLV171 [Camelpox virus]
gi|18483081|gb|AAL73878.1|AF438165_168 DNA ligase [Camelpox virus M-96]
gi|19718142|gb|AAG37667.1| CMP168R [Camelpox virus CMS]
Length = 552
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 144/582 (24%), Positives = 257/582 (44%), Gaps = 56/582 (9%)
Query: 27 KKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSAD 86
K++SK + TY D D + ++L+LP LD + K+ + +I + D
Sbjct: 21 KEKSKLIRDFITYRD--DKYLIIKLLLPGLDDRIYNMNDKQIIKIYSII----FKQSQED 74
Query: 87 AVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKI 146
++ + + G F E+ + + LT+KE++ L L+S + +I
Sbjct: 75 MLQDLGY--GYIGDTISTFFKENTEIRPTNKSI----LTLKEVDSFLTTLSSVTKESHQI 128
Query: 147 SVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKL 206
+L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 129 KLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE-- 186
Query: 207 KDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSE 266
+ Q + V + P LA + A++K + E K+DG+R+Q+HKN +E
Sbjct: 187 NESKQNLDSISVSVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNNNE 245
Query: 267 IHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIA 323
+FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 246 FAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS----L 299
Query: 324 KAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGL 383
+ + +C F FD LY + L ER L+ V+ +P+ +
Sbjct: 300 GIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNRIV 351
Query: 384 NSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKP 443
S + N ++ + + + EG+VLKD+ +EPG R +WLK+K
Sbjct: 352 FSELTN---------ISNESQLIDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKR 400
Query: 444 EYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 500
+Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +G
Sbjct: 401 DYLNEGSMADSADLVVLGAYYGKGSKGGIMAVFLMGCYD---DESGKWKTVTKC---SGH 454
Query: 501 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIR 560
D L + +L + + PK+ P + N PD +E P++S I I+
Sbjct: 455 DDNTLRVLQDQLM-MVKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGTEF 510
Query: 561 TIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 511 TSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|88854250|gb|ABD52668.1| ATP-dependent DNA ligase [Vaccinia virus]
Length = 552
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 144/584 (24%), Positives = 256/584 (43%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT++E++ L L+S +
Sbjct: 73 EDMLQDLGY--GYIGDTIRTFFKENTEIRPRDKSI----LTLEEVDSFLTTLSSVTKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDVASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
Q I V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 --NSSKQNLDSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +LK + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRELQDQLK-MIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|290973973|ref|XP_002669721.1| predicted protein [Naegleria gruberi]
gi|284083272|gb|EFC36977.1| predicted protein [Naegleria gruberi]
Length = 1260
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 194/373 (52%), Gaps = 46/373 (12%)
Query: 250 ECKFDGDRIQIH--KNGSEIHYFSRSFLDHSEYG-----HAMSKIIEQNVLVDRCILDGE 302
E K+DG+RIQIH + EI YFSR+ D EY +SK I++ V + ILDGE
Sbjct: 363 ELKYDGERIQIHYDRKNDEIKYFSRNLKDVQEYKIKSVKKYISKAIKEKV--ESVILDGE 420
Query: 303 MLVWDTSLNRFAEFGS-NQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHE 361
+L+ DT N+ FG+ + + + +D +++ F FD+LY S++ L +R
Sbjct: 421 ILMMDTKTNKILPFGTLGKNVRQDHKDAVTT-----IFLFDILYYNGKSLLSVPLYKRKA 475
Query: 362 LLQKVVKPSKGRL---ETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDE 418
L+ K+V P K R+ E LV V+ + ++V+ + + I+ +E
Sbjct: 476 LMTKIVNPIKHRVMLGEYLV--------VKGSKQTREAIVSAEMSAM-------IKKGEE 520
Query: 419 GIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVAL 477
G+VLKDL S +EP R WLK+K +Y++ +D +D++++G Y G+G +GG ++ F++
Sbjct: 521 GLVLKDLCSPYEPNARH--WLKMKKDYLKGMADSVDLVVLGAYLGTGSKGGLMSVFMMG- 577
Query: 478 AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSK 537
+ D ++ C+ G G D+ ++ + +LK ++ P + N+
Sbjct: 578 ----SFDKKLGKWRIICKCGNGHDDQTIETLNEELKSNMKRISKDPSLVPDDIDIHTNAL 633
Query: 538 ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFV 597
PD ++ P+KS++ I ++ S P S+RFPR+ ++R DK D LD ++
Sbjct: 634 -VPDFIVKDPKKSVVWEIQGAEFSVSSRK-DRPISVRFPRVTKIRDDK---DVLDHTNYQ 688
Query: 598 ELVHSSNGTTQKG 610
E++ N + +KG
Sbjct: 689 EIIKLKNESNRKG 701
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 122 GGLTIKELNDLLDRLASSENRAEKISVLSTLIK-KTNAQEMKWIIMIILKDLKLGISEKS 180
G +T+K+++D L+ L + ++I + K E+K+I II KDLK+ K
Sbjct: 117 GIVTLKQVDDFLEELTQLSKKEDQIRAFKKFVNDKLTGDELKFICRIICKDLKIRAGPKY 176
Query: 181 IFHEFHPDAEDLFNVTCDLKLV 202
+ H DA + +T DLK +
Sbjct: 177 LLAALHSDAYQSYILTHDLKQI 198
>gi|380089931|emb|CCC12242.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 919
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 149/567 (26%), Positives = 243/567 (42%), Gaps = 105/567 (18%)
Query: 119 MISGGLTIKELNDLLDRLASSE-NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGIS 177
M G K+++ + L++++ N K+ ++ +K E K+I+ + L+LG++
Sbjct: 388 MTGTGAQQKKVDGIKKLLSAADANSTGKVDIIK---EKGGPSEAKFIVRFLEGKLRLGLA 444
Query: 178 EKSIF---------HEFH-----PDAEDLFNVTCDLKLVCEKLKDRN------QRHKRQD 217
EKS+ HEF P D LK V +L N +H +
Sbjct: 445 EKSVIVSLAQAMIAHEFAQKGKVPSESDFSKAESILKTVYSELPSYNVIIPAMLQHGIMN 504
Query: 218 IE------VGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH---------- 261
+ G ++P LA + G+ E K+DG+R QIH
Sbjct: 505 LRDHCKLRPGVPLKPMLANPTKAITEVLDRFEGQTFTCEYKYDGERAQIHYVAKDAPKSD 564
Query: 262 ---------KNGSEIH-YFSRSFLDHSE-YGHAMSKI---IEQNVLVDRCILDGEMLVWD 307
+ G + FSR+ D S+ Y ++K+ +++ +LD E + WD
Sbjct: 565 GDLSQVASKETGKGVAAIFSRNSEDLSQKYPDVLAKLPTWVKEGT--KSFVLDCESVAWD 622
Query: 308 TSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQK 365
T + F Q + + +D D ++ C FAFD+LY+ +V+ +SL+ER ELL+
Sbjct: 623 TVEKKVLPF--QQLMTRKKKDVKLEDVKVKVCVFAFDLLYLNGQAVVEKSLRERRELLRS 680
Query: 366 VVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL 425
KP +G S+ +DE++ F E+++ EG+++K L
Sbjct: 681 AFKPVEGEFSF-----------------ATSMDGQELDEIQMFLDESVKASCEGLMVKML 723
Query: 426 G---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERP 481
S +EP RS WLK+K +Y+ G LD++++G Y+G G+R FL+A P
Sbjct: 724 DGAESGYEPSKRSRNWLKIKKDYLAGIGDSLDLVVLGAYHGKGKRTSVFGAFLLACYN-P 782
Query: 482 APDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPD 541
DTY + C +GTG SDE L + L P + PK FY ++ + +PD
Sbjct: 783 NSDTYE----TVCNIGTGFSDEVLQELHASLSPII--IDRPK----PFYAHSSGGQHQPD 832
Query: 542 VWIESPE-----KSIILSITSDIRTIRSEVFSAP----YSLRFPRIDRVRYDKPWHDCLD 592
VW E P+ K+ L+++ + E SLRFPR +VR DK +
Sbjct: 833 VWFE-PKYVWEVKTADLTLSPRYKAGMKEGVDPAGEKGISLRFPRFIKVREDKKADEATT 891
Query: 593 VQSFVELVHSSNGTTQKGKEYGGLQDD 619
+ E+ GK G DD
Sbjct: 892 SRMVAEMYRKQESV---GKSKGPAVDD 915
>gi|74217593|dbj|BAE33548.1| unnamed protein product [Mus musculus]
Length = 1011
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 223/496 (44%), Gaps = 51/496 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E++ L L+ E+ L + + A ++K II +I DLK+ K +
Sbjct: 373 LTIQEVDAFLLHLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLKMNSGAKHVLD 432
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQ---------RHKRQDIEVGKAVRPQLAMRIGD 234
P+A + F + +L+ V E++ Q R R + V+P LA
Sbjct: 433 ALDPNAYEAFKASRNLQDVVERVLHNEQEVEKDPGRRRALRVQASLMTPVQPMLAEACKS 492
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HK G FSRS L H + H I +
Sbjct: 493 IEYAMKKCPNG-MFSEIKYDGERVQVHKKGDHFSCFSRSLKPVLPH-KVAHFKDYIPKAF 550
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + + FG+ KAA D +C F FD +Y D S+
Sbjct: 551 PGGQSMILDSEVLLIDNNTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 606
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + + R+ + S ++ + + D + + +E
Sbjct: 607 MDRPLCERRKFLHDNMVEIRNRI--------MFSEMKQVTK-----ASDLADMINRVIRE 653
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 654 GL----EGLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 707
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ + PD+ +++ + + G D L + +L K PS
Sbjct: 708 MMSIFLMGCYD---PDS--QKWCTVTKCAGGHDDATLARLQKEL--VMVKISKDPSKIPS 760
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPW 587
+ ++ N PD + P+K+ + IT RSE +A S+RFPR R+R DK W
Sbjct: 761 WLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRFPRCTRIRDDKDW 817
Query: 588 HDCLDVQSFVELVHSS 603
++ EL S
Sbjct: 818 KSATNLPQLKELYQLS 833
>gi|328872844|gb|EGG21211.1| BRCT domain-containing protein [Dictyostelium fasciculatum]
Length = 1087
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 131/491 (26%), Positives = 238/491 (48%), Gaps = 46/491 (9%)
Query: 125 TIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHE 184
T+K++++ LD+L + +++ V+ +K + + + +I DLK+ K
Sbjct: 150 TLKQVDEFLDKLTTVSKFDDQVVVIKKFLKHCTPNDWRLVNRMIDSDLKVNTGAKFFLEA 209
Query: 185 FHPDAEDLFNVTCDLKLVCEKL--------KDRNQRHKRQDIEVGKA----VRPQLAMRI 232
HP A + + +LK V E + KD + K + + + + ++P L +
Sbjct: 210 LHPQAFEAYKKANNLKAVIETVQKHGFTEDKDGKKSTKLKSLNISLSLMTPIKPMLPKAV 269
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHA-MSKIIEQN 291
++ E K+DG+RIQIHK+G ++SR+ + + + I +
Sbjct: 270 KSVDEIIKQC-SSMFYAEIKYDGERIQIHKDGKNFKFYSRNLKPIMPWKVVDVQEFIPKA 328
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
D ILDGE+L+ DT ++ FG+ + + G SD +C F FD+LY+ S+
Sbjct: 329 TKADSIILDGEILLMDTKTSKPLPFGT---LGVHKKQGF-SDATVCVFLFDILYLNGESL 384
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
I+ + +R E+L+K V K R+E L+ +G+ S ++ K
Sbjct: 385 INLPMHKRREILEKNVNVVKHRIE-------LSETTMVKGKEDKSTLS-------KLLGR 430
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEV 470
I+ + EG+V+KD S +EPG R W+K+K +Y+ +D D+L IGGYYG+G GG V
Sbjct: 431 AIKEKLEGLVIKDSTSVYEPGCRH--WIKIKKDYLHGMADSADLLAIGGYYGTGSSGGLV 488
Query: 471 AQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFY 530
FL+ + ++ A + + C+V GL D+ ++ + K+K K P++
Sbjct: 489 TVFLMCVYDKDA-----NNYKTVCKVSGGLDDKAIEKLQPKVKKDMIKISKDSSKLPAWL 543
Query: 531 QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDC 590
+ + PD + P+K+++ + + ++ ++ YS+RFPRI ++R+DK HD
Sbjct: 544 DIIKSY--TPDFIVSDPKKAMVFELEA-AEITGTKHHTSGYSMRFPRITKIRHDKD-HDT 599
Query: 591 LDVQSFVELVH 601
+F E H
Sbjct: 600 --ATTFKEFKH 608
>gi|401825510|ref|XP_003886850.1| DNA ligase [Encephalitozoon hellem ATCC 50504]
gi|392998006|gb|AFM97869.1| DNA ligase [Encephalitozoon hellem ATCC 50504]
Length = 589
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 218/467 (46%), Gaps = 59/467 (12%)
Query: 140 ENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF----HEFHPDAED---- 191
++ + K ++ ++ K + E K+++ +I LK+G++ K++ + F D D
Sbjct: 134 KSSSSKKRIILGMMVKCSPLESKYLVRLIEGRLKIGLALKTVLISLGNVFSSDKADEIKA 193
Query: 192 LFNVTCDLKLVCEKLKDRNQRH--KRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVI 249
FN D+ + E + D + R + G ++P LA D +A++++ K
Sbjct: 194 AFNRQPDIGRLAECILDHGMENLAVRFQVTPGIPLKPMLANPSKDLTSAFKRVENKSFAC 253
Query: 250 ECKFDGDRIQIHKNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVLVDRCILDGEMLVWDT 308
E K+DG+R+QIHK GS I FSR+ +E Y M N+ I+DGE++ +D
Sbjct: 254 EYKYDGERVQIHKFGSSIETFSRNSEKTTEKYPDLMDLY---NISDKDFIIDGEIVAYDR 310
Query: 309 SLNRFAEFGSNQEIAKAARDGLSS---DRQLCYFAFDVLYVGDTSVIHQSLKERHELLQK 365
+ F Q + R + S D +C FAFD++Y + I + L+ER +L
Sbjct: 311 REGKILPF---QVLTTRKRKRVESSKIDVHVCVFAFDLIYFDGKAYIDEVLEERRRVLHS 367
Query: 366 VVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL 425
+ +GR + + R P ++ E FF ++E EGI++K L
Sbjct: 368 SFREVEGRFQF--------AEFRDCETP---------EDAETFFSTSVEKGFEGIMVKTL 410
Query: 426 G--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPA 482
G + + P RS KW+K+K +Y+ + SD LD++++G YYG G+R G FL+ +
Sbjct: 411 GPDTTYLPSQRSNKWIKIKKDYLESMSDSLDLVVMGAYYGKGKRTGFYGGFLLGVY---- 466
Query: 483 PDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDV 542
+ +F + C++GTG D L + +L + P Y + K PDV
Sbjct: 467 -NDEEEKFEALCKIGTGFDDSILSKLYEQLSSNL-------CSAPKNYSYKESVK--PDV 516
Query: 543 WIESPE----KSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
W+E+ ++ +S+ S I SLRFPR R R DK
Sbjct: 517 WVEAKYVWEVRAAGMSL-SPIYNAGGSRNGKGISLRFPRFIRERDDK 562
>gi|320583100|gb|EFW97316.1| dna ligase, putative [Ogataea parapolymorpha DL-1]
Length = 812
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 156/619 (25%), Positives = 296/619 (47%), Gaps = 84/619 (13%)
Query: 78 LGMSKDSADAVRLINWRKGG--AAPNAGNFPMVAAEVL-QRRQGMISGGLTIKELNDLLD 134
+ +SK++ D ++ W+K G ++ F + + ++ +RR ++ LT+ ++N LD
Sbjct: 1 MRISKENEDYKKIAGWKKIGFNKLQSSLKFADLLSNIISKRRIDKLTAQLTVDDVNAYLD 60
Query: 135 RL--ASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDL 192
+L + + K V ++ KTN E+++ I+LK + +K + +HPD+ D+
Sbjct: 61 KLHELADSDTDSKAKVFEEILDKTNNIELRFFFRIVLK-INPIRRDKLFLYCWHPDSLDV 119
Query: 193 FNVTCDLKLVCEKLKDRNQR--HKRQDIEVGKAVRPQLAMRIG-DAHAAWRKLHGKEVVI 249
F++T DLK V L D R K + PQ A RI D +K G + +I
Sbjct: 120 FDLTHDLKFVFWGLTDPKIRLESKEKHSRPMYPFTPQRAKRIHLDYDLVAQKFSG-QFLI 178
Query: 250 ECKFDGDRIQIH----KNGSEIHYFSRSFLDHSE-YGHA--------MSKIIEQNVL--V 294
E K++G+RIQ+H NG + +FSR+ +D+S YG + +S ++ ++ V
Sbjct: 179 EEKYNGERIQLHVEKTPNGYDYRFFSRNAIDYSSIYGRSSDPSSIGCISPFLKDALVDGV 238
Query: 295 DRCILDGEMLVWDTSLNRFAEFGSNQEIA-KAARDGLSSDRQLCYFAFDVLYVGDTSVIH 353
CILDGEM+ +D N F + + A K + D + Y FD+L++ S+
Sbjct: 239 QSCILDGEMVSYDPVKNMTLPFSTLKPTALKDLKSQKKDDPRPMYMVFDILHLNGCSLED 298
Query: 354 QSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETI 413
L +R + L++V+ + R+E +VP ++ G+ ++E K I
Sbjct: 299 YKLMDRKKALERVMNTVRHRVE-VVP-----YELKSTGQ-----------DIENSLKLAI 341
Query: 414 ENRDEGIVLKDLGSKWEPGDRSGK-WLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVA 471
EG+VLKD S++E G+ + + W+K+KPEY+ G +LD++I+G +
Sbjct: 342 RKDLEGLVLKDPNSRYEIGNYTTETWIKVKPEYLHEFGENLDLVIVGQIPAAK------T 395
Query: 472 QFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQ 531
++ AL + D+ F + C V G S ++ + + +++ K P +
Sbjct: 396 TYICALRDSETSDS----FTTLCGVSNGFSVDDYRKIQQMTAG--KWHQWGKEQPTN--- 446
Query: 532 VTNNSKERPDVWIESPEKSIILSITSDIRTIRSE-VFSAPYSLRFPRIDRVRYDKPWHDC 590
K+ P +WI+ P++S+++ + S ++++E ++ +L ++R DK W
Sbjct: 447 -VKFGKKTPLMWID-PKESVVIEVKSSSISVQAENNYATGSTLYAAYCTKIREDKTWETA 504
Query: 591 LDVQSF----VELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTD 646
++++ +E + ++ T K ++ + D Q R +R G + NV PS+
Sbjct: 505 DTLETYQNSKLERDYEASHTLAKKRKLASTKKDDIIQ-RINR-GYRSNVD--PSN----- 555
Query: 647 VSDIKGETSIFSDMVFCIL 665
+F + VFCI+
Sbjct: 556 --------QLFKNYVFCIM 566
>gi|270004895|gb|EFA01343.1| hypothetical protein TcasGA2_TC003800 [Tribolium castaneum]
Length = 592
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 194/413 (46%), Gaps = 56/413 (13%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDH-SE 279
G ++P LA + G + E K+DG+R QIH +G ++ FSR+ ++ S+
Sbjct: 211 GIPLKPMLAHPTKGIQEVLHRFDGLKFTCEWKYDGERAQIHISGKDVFIFSRNQENNTSK 270
Query: 280 YGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCY 338
Y +S+I + ++ V C+LD E + WD F + D S Q+C
Sbjct: 271 YPDIISRIDKCKDEKVQSCVLDCEAVAWDRERKVILPFQILSTRKRKDADESSIKVQVCV 330
Query: 339 FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW--S 396
F FD+LY+ S++ + ER LL++ K +GE C+ S
Sbjct: 331 FMFDLLYLNGESLVKKPFIERRNLLKEHFK-------------------EVEGEWCFVTS 371
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYI-RAGSDLD 453
L + ++EV++F +E+I+ EG+++K L + +E RS WLKLK +Y+ G LD
Sbjct: 372 LDTNTMEEVQEFLEESIKGNCEGLMVKTLEKEATYEIAKRSHNWLKLKKDYLDSCGDTLD 431
Query: 454 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 513
+++IGGY G G+R G FL+A ++ + + F S C++GTG SDE L LK
Sbjct: 432 LVVIGGYLGKGKRTGTYGGFLLACYDQESEE-----FQSICKIGTGFSDEALQQHSEFLK 486
Query: 514 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT----SDIRTIRSE 565
+ + P +Y+ + PD W +S + K LS++ + I + SE
Sbjct: 487 NHVI------QGPKPYYRF--DGSHEPDHWFDSVQVWEVKCADLSLSPVHRAGIGIVDSE 538
Query: 566 VFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFV------ELVHSSNGTTQKGKE 612
SLRFPR R+R DK + Q E V + GT+ K E
Sbjct: 539 ---KGISLRFPRFVRIREDKSSEEATSSQQVASMYSNQEQVKNQAGTSNKAAE 588
>gi|336263280|ref|XP_003346420.1| hypothetical protein SMAC_05315 [Sordaria macrospora k-hell]
Length = 934
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 149/567 (26%), Positives = 243/567 (42%), Gaps = 105/567 (18%)
Query: 119 MISGGLTIKELNDLLDRLASSE-NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGIS 177
M G K+++ + L++++ N K+ ++ +K E K+I+ + L+LG++
Sbjct: 403 MTGTGAQQKKVDGIKKLLSAADANSTGKVDIIK---EKGGPSEAKFIVRFLEGKLRLGLA 459
Query: 178 EKSIF---------HEFH-----PDAEDLFNVTCDLKLVCEKLKDRNQ------RHKRQD 217
EKS+ HEF P D LK V +L N +H +
Sbjct: 460 EKSVIVSLAQAMIAHEFAQKGKVPSESDFSKAESILKTVYSELPSYNVIIPAMLQHGIMN 519
Query: 218 IE------VGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH---------- 261
+ G ++P LA + G+ E K+DG+R QIH
Sbjct: 520 LRDHCKLRPGVPLKPMLANPTKAITEVLDRFEGQTFTCEYKYDGERAQIHYVAKDAPKSD 579
Query: 262 ---------KNGSEIH-YFSRSFLDHSE-YGHAMSKI---IEQNVLVDRCILDGEMLVWD 307
+ G + FSR+ D S+ Y ++K+ +++ +LD E + WD
Sbjct: 580 GDLSQVASKETGKGVAAIFSRNSEDLSQKYPDVLAKLPTWVKEGT--KSFVLDCESVAWD 637
Query: 308 TSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQK 365
T + F Q + + +D D ++ C FAFD+LY+ +V+ +SL+ER ELL+
Sbjct: 638 TVEKKVLPF--QQLMTRKKKDVKLEDVKVKVCVFAFDLLYLNGQAVVEKSLRERRELLRS 695
Query: 366 VVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL 425
KP +G S+ +DE++ F E+++ EG+++K L
Sbjct: 696 AFKPVEGEFSF-----------------ATSMDGQELDEIQMFLDESVKASCEGLMVKML 738
Query: 426 G---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERP 481
S +EP RS WLK+K +Y+ G LD++++G Y+G G+R FL+A P
Sbjct: 739 DGAESGYEPSKRSRNWLKIKKDYLAGIGDSLDLVVLGAYHGKGKRTSVFGAFLLA-CYNP 797
Query: 482 APDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPD 541
DTY + C +GTG SDE L + L P + PK FY ++ + +PD
Sbjct: 798 NSDTYE----TVCNIGTGFSDEVLQELHASLSPII--IDRPK----PFYAHSSGGQHQPD 847
Query: 542 VWIESPE-----KSIILSITSDIRTIRSEVFSAP----YSLRFPRIDRVRYDKPWHDCLD 592
VW E P+ K+ L+++ + E SLRFPR +VR DK +
Sbjct: 848 VWFE-PKYVWEVKTADLTLSPRYKAGMKEGVDPAGEKGISLRFPRFIKVREDKKADEATT 906
Query: 593 VQSFVELVHSSNGTTQKGKEYGGLQDD 619
+ E+ GK G DD
Sbjct: 907 SRMVAEMYRKQESV---GKSKGPAVDD 930
>gi|385805348|ref|YP_005841746.1| ATP-dependent DNA ligase [Fervidicoccus fontis Kam940]
gi|383795211|gb|AFH42294.1| ATP-dependent DNA ligase [Fervidicoccus fontis Kam940]
Length = 599
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 137/508 (26%), Positives = 233/508 (45%), Gaps = 75/508 (14%)
Query: 124 LTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
L++K++ + ++A++E +R K+ VL+ L+K E ++I+ + L++ I + +
Sbjct: 121 LSVKKIYESFVKIATAEGEGSRDIKLRVLAGLLKDAQPIEARFIVRFVEGRLRINIGDAT 180
Query: 181 IFHEF----------HPDAEDLFNVTCDLKLVCEKL-KDRNQRHKRQDIEVGKAVRPQLA 229
+ P E +N+ DL + E L KD + +VG +RP LA
Sbjct: 181 VMDALSIAFTGTDANRPIIERAYNLRADLGDIAEILVKDGINALQNITPKVGIPIRPMLA 240
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE 289
R D K+ GK V E K+DG+R QIHK+ EI FSR + + H ++E
Sbjct: 241 ERHNDPKVMLEKVGGKAYV-EYKYDGERAQIHKSNDEITIFSRRLENIT---HQYPDVVE 296
Query: 290 QN---VLVDRCILDGEMLVWDTSLNRFAEF------GSNQEIAKAARDGLSSDRQLCYFA 340
+ + + I++GE++ D F +I K + + + F
Sbjct: 297 YSRKYIKANEAIVEGEIVAIDPDTRELRPFQILMTRKRKHDITK-----MMKEVPVSVFL 351
Query: 341 FDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAH 400
FD +YV + + L ER + L+ V+ S D + +
Sbjct: 352 FDAIYVDGKDLTNFPLPERRKYLESVIAQSD--------DMQIAQY----------KYID 393
Query: 401 NVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIRAGSD-LDVLII 457
N +++EK F E I N EG+++K + K ++ G+R W+K K +Y SD +D++++
Sbjct: 394 NAEDLEKMFYEAISNGAEGVMIKSISEKSIYQAGNRGWLWIKYKRDYRSEMSDSVDLVVV 453
Query: 458 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 517
G +YG G+R G+++ LVA P D F + C+VGTG +DEELD K+ F+
Sbjct: 454 GAFYGKGKRAGKLSTILVA-GYDPDADV----FRTVCKVGTGFTDEELD----KMTEEFK 504
Query: 518 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSI-----ILSITSDIRTIRSEVF-SAPY 571
Y + P ++T PDVW+ P+K + L+++ + E+ A
Sbjct: 505 GYIIDHKDPRVISEIT------PDVWL-IPKKVVEVIGAELTLSPLHTCAKGEISKEAGL 557
Query: 572 SLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
S+RFPR R DK D + VE+
Sbjct: 558 SIRFPRFINWRPDKGPEDATTCKELVEM 585
>gi|44971522|gb|AAS49872.1| RPXV159 [Rabbitpox virus]
Length = 552
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 143/584 (24%), Positives = 256/584 (43%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT++E++ L L+S +
Sbjct: 73 EDMLQDLGY--GYIGDTIRTFFKENTEIRPRDKSI----LTLEEVDSFLTTLSSVTKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P+A D+F + +LK + E
Sbjct: 127 QIKLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPNAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
Q I V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 --NSSKQNLDSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +L + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRELQDQL-TMIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|282165835|ref|NP_001164142.1| DNA ligase [Tribolium castaneum]
Length = 756
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 194/413 (46%), Gaps = 56/413 (13%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDH-SE 279
G ++P LA + G + E K+DG+R QIH +G ++ FSR+ ++ S+
Sbjct: 375 GIPLKPMLAHPTKGIQEVLHRFDGLKFTCEWKYDGERAQIHISGKDVFIFSRNQENNTSK 434
Query: 280 YGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCY 338
Y +S+I + ++ V C+LD E + WD F + D S Q+C
Sbjct: 435 YPDIISRIDKCKDEKVQSCVLDCEAVAWDRERKVILPFQILSTRKRKDADESSIKVQVCV 494
Query: 339 FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW--S 396
F FD+LY+ S++ + ER LL++ K +GE C+ S
Sbjct: 495 FMFDLLYLNGESLVKKPFIERRNLLKEHFK-------------------EVEGEWCFVTS 535
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYI-RAGSDLD 453
L + ++EV++F +E+I+ EG+++K L + +E RS WLKLK +Y+ G LD
Sbjct: 536 LDTNTMEEVQEFLEESIKGNCEGLMVKTLEKEATYEIAKRSHNWLKLKKDYLDSCGDTLD 595
Query: 454 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 513
+++IGGY G G+R G FL+A ++ + + F S C++GTG SDE L LK
Sbjct: 596 LVVIGGYLGKGKRTGTYGGFLLACYDQESEE-----FQSICKIGTGFSDEALQQHSEFLK 650
Query: 514 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT----SDIRTIRSE 565
+ + P +Y+ + PD W +S + K LS++ + I + SE
Sbjct: 651 NHVI------QGPKPYYRF--DGSHEPDHWFDSVQVWEVKCADLSLSPVHRAGIGIVDSE 702
Query: 566 VFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFV------ELVHSSNGTTQKGKE 612
SLRFPR R+R DK + Q E V + GT+ K E
Sbjct: 703 ---KGISLRFPRFVRIREDKSSEEATSSQQVASMYSNQEQVKNQAGTSNKAAE 752
>gi|90660409|gb|ABD97523.1| DNA ligase [Cowpox virus]
Length = 552
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 142/584 (24%), Positives = 257/584 (44%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ + + + LT++E++ L L+S +
Sbjct: 73 EDMLQDLGY--GYIGDTISTFFKENTEIRPKDKSI----LTLEEVDSFLTTLSSVTKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P+A D+F + +LK + E
Sbjct: 127 QIKLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPNAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+N I V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 NASKQNL--DSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +L + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRVLQDQL-TMVKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|328876528|gb|EGG24891.1| DNA ligase IV [Dictyostelium fasciculatum]
Length = 1012
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 128/231 (55%), Gaps = 12/231 (5%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVL 70
+ L + K K+ KF Y D+ ++F LRL LP LD+ER +YGLKE L
Sbjct: 226 IFCELLERVSKDSKHTDKKKHLSKFFSNYKDN-NFFPLLRLFLPHLDKERQTYGLKEKTL 284
Query: 71 ANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELN 130
A ++ LG+S S DA RL+NW+K G+F M L+ R + G L++ ++N
Sbjct: 285 AKFYVEILGISPTSLDATRLVNWKKSTNDEIGGDFGMSVYLSLRNR-CIQKGRLSMGDVN 343
Query: 131 DLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAE 190
LD L S +R EK+ VL +++ T E KW + IILK++K+G+SEK++ + FH DA
Sbjct: 344 ISLDHLNKSMDRKEKLRVLKRVLRYTTCLEQKWFVRIILKEMKMGLSEKTVLNFFHSDAM 403
Query: 191 DLFNVTCDLKLVCEKLKDRNQRHKRQD----------IEVGKAVRPQLAMR 231
+FNV+C+L+ VCE L D + + + I + + ++P LA R
Sbjct: 404 AMFNVSCNLRKVCEDLSDARRLYGSGNTGGFVTDPSKITLFQPIKPMLADR 454
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 135/264 (51%), Gaps = 41/264 (15%)
Query: 434 RSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSG--RRGGEVAQFLVALAERPAPDTYPRR- 489
+ KW+K+KPEY+ G DLD++IIGGYYGSG RRGG V+ F++ + + PD
Sbjct: 474 KKDKWIKIKPEYLDGVGDDLDLVIIGGYYGSGVGRRGGTVSHFMLGVQVK-DPDLQLSNS 532
Query: 490 ------FISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVW 543
F SFC+VG+G SDEEL + L+P++ Y +PPS + +E+PD+W
Sbjct: 533 SSDTPLFYSFCKVGSGYSDEELKKLQKALEPHWMPYR--TSSPPSHILLAEPHREKPDLW 590
Query: 544 IESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSS 603
I+ P S +L I + + + +E + Y+LRFPR+ ++R DKPW +CLD + + L
Sbjct: 591 ID-PRVSKVLQIKA-AQILPTEKYRTGYTLRFPRVIKIRDDKPWDECLDFGAMLSLATEF 648
Query: 604 NGTTQKGKEYGGLQ----------------------DDKPKQFRSSRKGEKKNVSIVPSH 641
G K K G D P S+ KG+KK + S
Sbjct: 649 EGRYAKRKYTMGDDGDGDGGGGGGGRKTKRKKKTNPDGTP--IASTAKGKKKTTLL--SI 704
Query: 642 FLQTDVSDIKGETSIFSDMVFCIL 665
F TD S I +IF + FC++
Sbjct: 705 FQDTDTSHILPSNNIFMGVEFCVI 728
>gi|373447602|gb|AEY72987.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 143/584 (24%), Positives = 256/584 (43%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT+++++ L L+S
Sbjct: 73 EDMLQDLGY--GYIGDTISTFFKENTEIRPRDKSI----LTLEDVDSFLTTLSSVTKELH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+N I V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 NASKQNL--DSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +LK + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRELQDQLK-MIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|325559200|gb|ADZ30576.1| DNA ligase [Cowpox virus]
Length = 554
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 143/582 (24%), Positives = 258/582 (44%), Gaps = 54/582 (9%)
Query: 27 KKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSAD 86
K++SK + T D+ D + ++L+LP LD + K+ + +I + D
Sbjct: 21 KEKSKLIRDFITDRDATDTYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQED 76
Query: 87 AVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKI 146
++ + + G F E+ + + + LT++E++ L L+S + +I
Sbjct: 77 MLQDLGY--GYIGDTISTFFKENTEIRPKDKSI----LTLEEVDSFLTTLSSVTKESHQI 130
Query: 147 SVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKL 206
+L+ + ++K ++M+I KDLK+ + + + +A D+F + +LK + E
Sbjct: 131 KLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISTNAYDVFRKSNNLKEIIENA 190
Query: 207 KDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSE 266
+N I V + P LA + A++K + E K+DG+R+Q+HK +E
Sbjct: 191 SKQNL--DSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKKNNE 247
Query: 267 IHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIA 323
+FSR+ L H + + I + ILD E+++ D N FGS
Sbjct: 248 FAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIILDSEIVLVDEH-NVPLPFGS----L 301
Query: 324 KAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGL 383
+ + +C F FD LY + L ER L+ V+ +P+ +
Sbjct: 302 GIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNRIV 353
Query: 384 NSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKP 443
S + N ++ + + + EG+VLKD+ +EPG R +WLK+K
Sbjct: 354 FSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKR 402
Query: 444 EYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 500
+Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +G
Sbjct: 403 DYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGH 456
Query: 501 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIR 560
D L + +LK + + PK+ P + N PD +E P++S I I+
Sbjct: 457 DDNTLRVLQDQLK-MIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAEF 512
Query: 561 TIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 513 TSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 554
>gi|307184383|gb|EFN70797.1| DNA ligase 3 [Camponotus floridanus]
Length = 925
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 140/525 (26%), Positives = 237/525 (45%), Gaps = 55/525 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI++++ L+ L+ E+I +++ + + ++K I+ +I DL++ K I
Sbjct: 277 LTIQDVDLFLESLSHLTKEEEQIQHFRSILDRCTSNDLKMIVRLIKHDLRINAGPKHILE 336
Query: 184 EFHPDAEDLFNVTCDLKLVCEK-LKDRNQR----------HKRQDIEVGKAVRPQLAMRI 232
H DA F ++ DL+ V + L D ++ + I + V P LA
Sbjct: 337 GVHVDAYRAFQMSRDLEAVIRRFLPDSEEKPSDTLGSPSSRNKVVISLMTPVLPMLAEAC 396
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDH--SEYGHAMSKI 287
A RK ++ E K+DG+R+Q+HK+G++ YFSRS L H + + +++
Sbjct: 397 TSVEMAMRKCPNG-MLSEVKYDGERVQVHKSGNDFRYFSRSLKPVLPHKVNLFKDYIARA 455
Query: 288 IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVG 347
D ILD E+L+ D + FG+ KA + +C F FD LY
Sbjct: 456 FPDG---DDLILDSEVLMVDNETGQPLPFGTLGIHKKAE----FKNANVCLFVFDCLYYN 508
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+I++S+ ER +L + T +P+ + S V P ++A + V K
Sbjct: 509 GEILINKSMLERRRILMDRM--------TEIPNRIMLSEVHEVHNP--RVLAERIVHVLK 558
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSG 464
EG+VLKD+ SK+EPG R WLK+K +Y+ G+ D++++G +YG+G
Sbjct: 559 LGL-------EGLVLKDIDSKYEPGKRH--WLKVKKDYLCGGAMADSADLVVLGAWYGTG 609
Query: 465 RRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 524
+GG ++ FL+ D ++++ +V TG D L A+ +L + K
Sbjct: 610 NKGGMLSIFLMGCY-----DEERDKWLTVTKVHTGHDDTTLTALQDELDMVKIGKDVDKL 664
Query: 525 APPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYD 584
PS+ + PD P+K + IT T + + S+RFPR+ R+R+D
Sbjct: 665 --PSW--LLAKKPMVPDFVARDPKKQPVWEITGAEFTNQGVHTADGISIRFPRVTRIRHD 720
Query: 585 KPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRK 629
K W + L + G L D K + +S RK
Sbjct: 721 KDWSTATSLNELRGLFKKKPDSVDFSHLLGTLADVKDTEKKSPRK 765
>gi|14520759|ref|NP_126234.1| ATP-dependent DNA ligase [Pyrococcus abyssi GE5]
gi|327507708|sp|P0CL75.1|DNLI_PYRAB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|5457975|emb|CAB49465.1| lig DNA ligase [Pyrococcus abyssi GE5]
gi|380741298|tpe|CCE69932.1| TPA: ATP-dependent DNA ligase [Pyrococcus abyssi GE5]
Length = 559
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 157/616 (25%), Positives = 279/616 (45%), Gaps = 97/616 (15%)
Query: 10 IVLVSLFNWIQKTKPAAKKRSKFRKFLDTYC-DSVDYFSALRL--ILPSLDRERGSYGLK 66
I L L+ ++KT K FL D +++ L L + P D ER G+
Sbjct: 4 IELAQLYQKLEKTTMKLIKTRLVADFLKKVPEDHLEFIPYLILGDVFPEWD-ER-ELGVG 61
Query: 67 ESVLANCLIDALGM-SKDSADAVRLINWRKGGAAPNAGNF-PMVAAEVLQRRQ-GMISGG 123
E +L + A G+ SK+ ++V+ + G+ +A V +R+Q S
Sbjct: 62 EKLLIKAVSMATGIDSKEIENSVK-----------DTGDLGESIALAVKKRKQKSFFSQP 110
Query: 124 LTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE-- 178
LTIK + L ++A + +K+ L+ L E K+I +L ++ G++E
Sbjct: 111 LTIKRVYQTLVKVAETTGEGSQDKKMKYLANLFMDAEPIEAKYIARTVLGTMRTGVAEGL 170
Query: 179 --KSIFHEFHPDAEDL---FNVTCDLKLVCEKLK-DRNQRHKRQDIEVGKAVRPQLAMRI 232
+I F+ E + + +T D V + K + N + I++GK ++P LA +
Sbjct: 171 LRDAISLAFNVKVELVERAYMLTSDFGFVAKIAKTEGNDGLAKVTIQIGKPIKPMLAQQA 230
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNV 292
+ A ++ G E E K+DG R+Q+HK+G ++ +SR + + + + I++ +
Sbjct: 231 ANIKEALLEMGG-EAEFEIKYDGARVQVHKDGEKVTIYSRRLENVTRAIPEIVEAIKEAL 289
Query: 293 LVDRCILDGEM---------LVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDV 343
+ I++GE+ L + L RF + +E+ + L+ FDV
Sbjct: 290 KPTKAIVEGELVAIGEDGRPLPFQYVLRRFRRKYNIEEMMEKIPLELN--------LFDV 341
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
LYV S+I ER + L+++V+ + G+++ +L+ NV+
Sbjct: 342 LYVDGVSLIDTKFMERRKKLEEIVE-TNGKVKI-----------------AENLITKNVE 383
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGS 463
E E+F+K +E EG++ K L + +EPG+R KWLK+KP +LD++IIG +G
Sbjct: 384 EAEQFYKRALEMGHEGLMAKRLDAVYEPGNRGKKWLKIKPTM----ENLDLVIIGAEWGE 439
Query: 464 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
GRR + F++ A D F+ +VG+G +D++L LKP K E +
Sbjct: 440 GRRAHLLGSFILG-----AYDPETGEFLEVGKVGSGFTDDDLVEFTKMLKPLIIKEEGKR 494
Query: 524 RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 583
VWI+ K +I +I+ +S + + ++LRFPR +R
Sbjct: 495 ------------------VWIQP--KVVIEVTYQEIQ--KSPKYRSGFALRFPRYVALRE 532
Query: 584 DKPWHDCLDVQSFVEL 599
DK D ++ +L
Sbjct: 533 DKGPEDADTIERIAQL 548
>gi|124027312|ref|YP_001012632.1| ATP-dependent DNA ligase [Hyperthermus butylicus DSM 5456]
gi|224487885|sp|A2BJX6.1|DNLI_HYPBU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|123978006|gb|ABM80287.1| ATP-dependent DNA ligase [Hyperthermus butylicus DSM 5456]
Length = 608
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 145/505 (28%), Positives = 240/505 (47%), Gaps = 60/505 (11%)
Query: 121 SGG---LTIKELNDLLDRLASSENRAEK---ISVLSTLIKKTNAQEMKWIIMIILKDLKL 174
SGG LT++++ D L R+A + + + +L+ L+ + + +E K+I + L+L
Sbjct: 121 SGGESTLTVEKVYDTLARIALVQGEGSRDIKLKLLAGLLAEASPREAKYIARFVEGRLRL 180
Query: 175 GISEKSIFHEF----------HPDAEDLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKA 223
G+ + +I E +N+ DL +V + L + K EVG
Sbjct: 181 GVGDATIMEALAVVYGGSAAMRSVVERAYNLRADLGMVAKILATQGIDALKNIKPEVGVP 240
Query: 224 VRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHA 283
+RP LA R+ D +KL G+ +V E K+DG+R QIHK G +I FSR + +
Sbjct: 241 IRPMLAERLNDPVEIIKKLGGRALV-EYKYDGERAQIHKKGDKIWIFSRRLENITHMYPD 299
Query: 284 MSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGS-NQEIAKAARDGLSSDRQLCYFAFD 342
+ ++ ++ + + I++GE++ D F F K + S+ + F FD
Sbjct: 300 VVEMAKKGIKAEEAIVEGEIVAIDPETGEFRPFQVLMHRRRKKDVHAVLSEIPVAVFLFD 359
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
LYV + + L RHE+L+K+++ S +T G +V +
Sbjct: 360 TLYVNGEDLTLKPLPARHEVLEKIIEQS----DTWRIAEG--------------IVTSDP 401
Query: 403 DEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGG 459
E+E FF + IE+ EG++ K + S ++ G R W+K K +Y SD +D+++IG
Sbjct: 402 QELESFFLKAIEDGAEGVMAKAIHDRSIYQAGARGWLWIKYKRDYKSEMSDTVDLVVIGA 461
Query: 460 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
+YG GRRGG+ L+A A P DT F S C+VG+G +DE+L+ + LKPY
Sbjct: 462 FYGKGRRGGKFGALLMA-AYDPDTDT----FKSVCKVGSGFTDEDLERLDDMLKPYISD- 515
Query: 520 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVF-----SAPYSLR 574
+ P R +S+ +PDVW+E + I+ + I + + A S+R
Sbjct: 516 KKPARV---------DSQMKPDVWVEPTLVAEIIGAELTLSPIHTCCYGWVKSGAGISIR 566
Query: 575 FPRIDRVRYDKPWHDCLDVQSFVEL 599
FPR R R DK D + E+
Sbjct: 567 FPRFIRWRPDKGPEDATTTKELYEM 591
>gi|325558342|gb|ADZ29722.1| DNA ligase [Cowpox virus]
Length = 552
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 142/584 (24%), Positives = 256/584 (43%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRMYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT++E++ L L+S +
Sbjct: 73 EDMLQDLGY--GYIGDTIRTFFKENTEIRPRDKSI----LTLEEVDSFLTTLSSVTKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+ Q + V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 --NESKQNLDSISVSVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +L + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRVLQDQL-TMVKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|399216058|emb|CCF72746.1| unnamed protein product [Babesia microti strain RI]
Length = 787
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 201/420 (47%), Gaps = 55/420 (13%)
Query: 190 EDLFNVTCDLKLVCEKLKDR---NQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKE 246
+D+++V +++++ +KL Q + I G V+P LA +G A+ K+ G E
Sbjct: 377 KDIYSVVPNVEIIVDKLLKGYLGKQLLESCGITPGIPVQPMLARPMGGPQQAFDKMKGVE 436
Query: 247 VVIECKFDGDRIQIHKNGSEI-HYFSRSFLDHSEYGHAMSKIIEQNV--LVDRCILDGEM 303
E K+DG+R Q+H + + H FSR+ + +E + KII+ +V V I+D E+
Sbjct: 437 FTCEYKYDGERAQVHMSEDGVFHVFSRNMENATEKYPDLIKIIKSSVDPSVKSFIIDSEV 496
Query: 304 LVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELL 363
+ +D + F + D + + +C + FD+LY+ S+ ++LKER E L
Sbjct: 497 VAFDREKGKILPFQILTTRKRKDVDENNINVNICIYPFDMLYLNGHSITRKNLKERREFL 556
Query: 364 QKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLK 423
+ G + T + + V+E+++F E+I N EG++ K
Sbjct: 557 YSSFREKFGEI-TFAKYKDIET----------------VNELQEFLNESIANNSEGLIAK 599
Query: 424 DL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAER 480
L + +EP RS WLK+K +Y+ SD +D++ I +YGSG+R +L+A+
Sbjct: 600 TLVENASYEPSKRSLNWLKIKKDYVEGMSDSVDLIPIAAFYGSGKRTSIFGSYLLAVYNE 659
Query: 481 PAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERP 540
F + C+ GTG +DE L ++ +K + + P +YQV++ K P
Sbjct: 660 EY-----ETFQTVCKTGTGFTDELLKSLHETMKNFIVSNK------PVYYQVSD--KMEP 706
Query: 541 DVWIESPEK---------SIILSITSDIRTIRSEVFSAPY------SLRFPRIDRVRYDK 585
D+W E P+K S+ T+ I TI S+ + +RFPR RVR DK
Sbjct: 707 DIWFE-PKKVWECKVSDFSLSPVHTASIGTIESDKVCVYWYTTFGIGMRFPRFVRVREDK 765
>gi|56713572|gb|AAW23612.1| ATP-dependent DNA ligase [Vaccinia virus]
gi|56713856|gb|AAW23894.1| ATP-dependent DNA ligase [Vaccinia virus]
Length = 552
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 144/584 (24%), Positives = 255/584 (43%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT++E++ L L+S
Sbjct: 73 EDMLQDLGY--GYIGDTIRTFFKENTEIRPRDKSI----LTLEEVDSFLTTLSSVTKELH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
Q I V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 --NSSKQNLDSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +LK + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRELQDQLK-MIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|6969850|gb|AAF34062.1| TA61R [Vaccinia virus Tian Tan]
Length = 552
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 143/584 (24%), Positives = 258/584 (44%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT+++++ L L+S +
Sbjct: 73 EDMLQDLGY--GYIGDTIRTFFKENTEIRPRDKSI----LTLEDVDSFLTTLSSVTKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P+A D+F + +LK + E
Sbjct: 127 QIKLLTDIAFVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPNAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+N I V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 NSSKQNLDF--ISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +LK + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRVLQDQLK-MIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|113195354|ref|YP_717484.1| DNA ligase [Taterapox virus]
gi|90660630|gb|ABD97743.1| DNA ligase [Taterapox virus]
Length = 552
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 141/583 (24%), Positives = 253/583 (43%), Gaps = 52/583 (8%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT++E++ L L+S +
Sbjct: 73 EDMLQDLGY--GYIGDTISTFFKENTEIRPRNKSI----LTLEEVDSFLTTLSSVTKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+ Q + V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 --NESKQNLDSISVSVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSFLDHSEY--GHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEI 322
+E +FSR+ Y + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSYKVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS---- 298
Query: 323 AKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
+ + +C F FD LY + L ER L V+ +P+
Sbjct: 299 LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLNDVM--------VEIPNRI 350
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLK 442
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+K
Sbjct: 351 VFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIK 399
Query: 443 PEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 499
+Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +G
Sbjct: 400 RDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SG 453
Query: 500 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI 559
D L + +L + + PK+ P + N PD +E P++S I I+
Sbjct: 454 HDDNTLRVLQDQL-TMVKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAE 509
Query: 560 RTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 510 FTPSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|373447838|gb|AEY73222.1| DNA ligase [Vaccinia virus]
gi|373448323|gb|AEY73705.1| DNA ligase [Vaccinia virus]
gi|373449506|gb|AEY74883.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 143/584 (24%), Positives = 256/584 (43%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT+++++ L L+S
Sbjct: 73 EDMLQDLGY--GYIGDTISTFFKENTEIRPRDKSI----LTLEDVDSFLTTLSSVTKELH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDVASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+N I V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 NASKQNL--DSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +LK + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRELQDQLK-MIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|88900793|gb|ABD57705.1| VACV169 [Vaccinia virus]
Length = 552
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 143/584 (24%), Positives = 256/584 (43%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT+++++ L L+S
Sbjct: 73 EDMLQDLGY--GYIGDTISTFFKENTEIRPRDKSI----LTLEDVDSFLTTLSSVTKELH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDVASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+N I V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 NASKQNL--DSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +LK + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRELQDQLK-MIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|194754293|ref|XP_001959430.1| GF12871 [Drosophila ananassae]
gi|190620728|gb|EDV36252.1| GF12871 [Drosophila ananassae]
Length = 749
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 193/430 (44%), Gaps = 85/430 (19%)
Query: 208 DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKN-GSE 266
D + +R + G +RP LA H + + G + E K+DG+R QIH N E
Sbjct: 353 DIKELQERCPMHPGMPLRPMLAQPTKGVHEVFERFGGMHITCEWKYDGERAQIHCNEKGE 412
Query: 267 IHYFSRSFLDHS-EYGHAMSKIIEQNVL---VDRCILDGEMLVWDTSLNRFAEFGSNQEI 322
I FSR+ +++ +Y +++ +N L V+ I+D E++ WD + F Q +
Sbjct: 413 ISIFSRNSENNTAKYPDLIAR--SKNFLKCPVESYIIDSEIVAWDVERKQILPF---QVL 467
Query: 323 AKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVP 379
+ R + + Q+C + FD+LY+ T+++ + L ER +LL + + +G +
Sbjct: 468 STRKRKNVDIEEIKVQVCVYIFDLLYINGTALVTKPLSERRKLLNEHFQEVEGEWQFAT- 526
Query: 380 DHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGK 437
+L +++DEV++F +E+++ EG+++K L + +E RS
Sbjct: 527 ----------------ALNTNDIDEVQQFLEESVKGNCEGLMVKTLDQEATYEIAKRSRN 570
Query: 438 WLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRV 496
WLKLK +YI G LD+++IGGY G G+R G FL+A DT + + C++
Sbjct: 571 WLKLKKDYISNVGDSLDLVVIGGYKGKGKRTGTYGGFLLACY-----DTENEEYQTICKI 625
Query: 497 GTGLSDEELDA--------VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE--- 545
GTG +DE+L V++ K Y+R +S PD W E
Sbjct: 626 GTGFTDEDLQTHSEFLGKHVISSAKSYYR----------------YDSSLEPDHWFEPVQ 669
Query: 546 -----------SPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQ 594
SP + I R I SLRFPR R+R DK + D
Sbjct: 670 VWEIKCADLSLSPIHRAAIGIVDGERGI---------SLRFPRFIRIRDDKNSENATDAN 720
Query: 595 SFVELVHSSN 604
+ S +
Sbjct: 721 QVAHMYQSQD 730
>gi|332796299|ref|YP_004457799.1| ATP-dependent DNA ligase I [Acidianus hospitalis W1]
gi|332694034|gb|AEE93501.1| DNA ligase I, ATP-dependent Dnl1 [Acidianus hospitalis W1]
Length = 600
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 136/537 (25%), Positives = 247/537 (45%), Gaps = 72/537 (13%)
Query: 101 NAGNFPMVAAEVLQRRQGM----------ISGGLTIKELNDLLDRLASSE---NRAEKIS 147
+ G+ VA ++ Q++Q S LT++++ D L ++A+S +R KI
Sbjct: 87 SVGDLGQVAFDIKQKQQSASILAFLGAQKASKPLTVEKVYDDLTKVATSTGEGSRDIKIR 146
Query: 148 VLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF----------HEFHPDAEDLFNVTC 197
+L+ L+K + E K+++ + L++GI + +I F P E +N+
Sbjct: 147 LLAGLLKDASPLEAKYLVRFVDGRLRVGIGDATILDALAITFGGGQNFRPIVERAYNLRA 206
Query: 198 DLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGD 256
DL + + L + ++ K + G +RP LA R+ D K+ G +++ K+DG+
Sbjct: 207 DLGNIAKILANGGIEQLKNIKPQPGIPIRPMLAERLSDPAEMLSKV-GNLALVDYKYDGE 265
Query: 257 RIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEF 316
R QIHK G +I FSR + + +++ I + V + I++GE++ D F
Sbjct: 266 RGQIHKAGDKIFIFSRRLENITNQYPDVAEYISKYVKGNEFIVEGEIIPVDPETGEMRPF 325
Query: 317 GSNQEIAKAARDG----LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKG 372
QE+ R + + F FD++Y + L ER +
Sbjct: 326 ---QELMHRKRKSDIHEAIKEYPVNVFLFDLMYYEGEDYTVKPLSERRK----------- 371
Query: 373 RLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWE 430
+LE++V D N +V ++ NV+++++FF + I EG+++K L + ++
Sbjct: 372 KLESIVED---NDYVH----IATHIITDNVEKLKEFFYQAISEGAEGVMVKSLAPDAIYQ 424
Query: 431 PGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRR 489
G R W+K K +Y +D +D++++G ++G GR+GG+ + FL+A A P D
Sbjct: 425 AGSRGWLWIKFKRDYQSEMADTVDLVMVGAFHGKGRKGGKYSSFLMA-AYNPDKDV---- 479
Query: 490 FISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEK 549
F + C+V +G +D ELD + K+ R +P+ S PDVW+
Sbjct: 480 FETVCKVASGFTDAELDDLQKKIAELKRDSPHPRVV----------STMVPDVWLTPALV 529
Query: 550 SIILSITSDIRTI----RSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
+ I+ I + + + S+RFPR R R DK D + +E+ S
Sbjct: 530 AEIIGAEITISPLHTCCKDQYAEGGLSIRFPRFIRWRPDKSPEDATTNREILEMYKS 586
>gi|38349042|gb|AAR18018.1| DNA ligase [Vaccinia virus]
gi|373448553|gb|AEY73934.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 143/584 (24%), Positives = 255/584 (43%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT+++++ L L+S
Sbjct: 73 EDMLQDLGY--GYIGDTISTFFKENTEIRPRDKSI----LTLEDVDSFLTTLSSVTKELH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDVASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+N I V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 NASKQNL--DSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + + + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYDDKSG---KWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +LK + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRELQDQLK-MIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|118775|sp|P20492.1|DNLI_VACCC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|335530|gb|AAA48182.1| putative A50R [Vaccinia virus Copenhagen]
Length = 552
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 142/584 (24%), Positives = 256/584 (43%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT+++++ L L+S +
Sbjct: 73 EDMLQDLGY--GYIGDTIRTFFKENTEIRPRDKSI----LTLEDVDSFLTTLSSVTKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P+A D+F + +LK + E
Sbjct: 127 QIKLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPNAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
Q I V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 --NSSKQNLDSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +L + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRVLQDQL-TMIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|232006|sp|Q02093.1|DNLI_ACIAM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|40786|emb|CAA45034.1| DNa ligase [Acidianus ambivalens]
Length = 600
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 136/537 (25%), Positives = 247/537 (45%), Gaps = 72/537 (13%)
Query: 101 NAGNFPMVAAEVLQRRQGM----------ISGGLTIKELNDLLDRLASSE---NRAEKIS 147
+ G+ VA ++ Q++Q S LT++++ D L ++A+S +R KI
Sbjct: 87 SVGDLGQVAFDIKQKQQSASILAFLGAQKASKPLTVEKVYDDLAKVATSTGEGSRDIKIR 146
Query: 148 VLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF----------HEFHPDAEDLFNVTC 197
+L+ L+K + E K+++ + L++GI + +I F P E +N+
Sbjct: 147 LLAGLLKDASPLEAKYLVRFVDGRLRVGIGDATILDALAITFGGGQNFRPIVERAYNLRA 206
Query: 198 DLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGD 256
DL + + L + ++ K + G +RP LA R+ D K+ G +++ K+DG+
Sbjct: 207 DLGNIAKILANGGIEQLKNIKPQPGIPIRPMLAERLSDPAEMLSKV-GNIALVDYKYDGE 265
Query: 257 RIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEF 316
R QIHK G +I FSR + + +++ I + V + I++GE++ D F
Sbjct: 266 RGQIHKAGDKIFIFSRRLENITNQYPDVAEYISKYVKGNEFIVEGEIIPVDPETGEMRPF 325
Query: 317 GSNQEIAKAARDG----LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKG 372
QE+ R + + F FD++Y + L ER +
Sbjct: 326 ---QELMHRKRKSDIHEAIKEYPVNVFLFDLMYYEGEDYTVKPLSERRK----------- 371
Query: 373 RLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWE 430
+LE++V D N +V ++ NV+++++FF + I EG+++K L + ++
Sbjct: 372 KLESIVED---NDYVH----IATHIITDNVEKLKEFFYQAISEGAEGVMVKSLAPDAIYQ 424
Query: 431 PGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRR 489
G R W+K K +Y +D +D++++G ++G GR+GG+ + FL+A A P D
Sbjct: 425 AGSRGWLWIKFKRDYQSEMADTVDLVMVGAFHGKGRKGGKYSSFLMA-AYNPDKDV---- 479
Query: 490 FISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEK 549
F + C+V +G +D ELD + K+ R +P+ S PDVW+
Sbjct: 480 FETVCKVASGFTDAELDDLQKKIAELKRDTPHPRVV----------STMVPDVWLTPALV 529
Query: 550 SIILSITSDIRTI----RSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
+ I+ I + + + S+RFPR R R DK D + +E+ S
Sbjct: 530 AEIIGAEITISPLHTCCKDQYAEGGLSIRFPRFIRWRPDKSPEDATTNREILEMYKS 586
>gi|383320642|ref|YP_005381483.1| DNA ligase I [Methanocella conradii HZ254]
gi|379322012|gb|AFD00965.1| DNA ligase I, ATP-dependent (dnl1) [Methanocella conradii HZ254]
Length = 583
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 140/523 (26%), Positives = 236/523 (45%), Gaps = 71/523 (13%)
Query: 102 AGNFPMVAAEVLQRR-QGMI--SGGLTIKELNDL---LDRLASSENRAEKISVLSTLIKK 155
G+ + A E+ QRR Q M + LT+ ++N + R A + + A+K +L L+ +
Sbjct: 95 TGHLGITAEEMFQRRRQAMFFEADELTVMDVNRTFAEIARQAGAGSAAKKQKLLIGLLHR 154
Query: 156 TNAQEMKWIIMI----ILKDLKLGISEKSIFHEFHPDAEDLFN---VTCDLKLVCEKLKD 208
+E ++I+ + +L K G+ E++I F D E + +T DL
Sbjct: 155 ATPKEAEYIVSLAIEYVLSGAKEGVMEEAIAKAFGVDVELVRRANMLTSDLGETARVAML 214
Query: 209 RNQRH-KRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEI 267
+R K I + VRP LA + A L G+ E K+DG R+Q+HK G ++
Sbjct: 215 EGERGLKGISIRPMRPVRPMLAQNVASIQEALEVLGGR-ADFETKYDGARLQVHKLGDQV 273
Query: 268 HYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR 327
+SR + +E + + ++Q+V D ILD E + D R F Q I R
Sbjct: 274 RLYSRRLENLTEALPEIVRYVKQSVKADSVILDCECIATDPKTGRPVPF---QNILTRLR 330
Query: 328 DGLSSDRQLCYF-----AFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
+ F FD+LYV S+I ER +L++ + P
Sbjct: 331 RIYKVEETEKLFPLFLRPFDILYVNGESMIDLPFIERRRILEQNIMP------------- 377
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLK 442
V + +P +L+ V+E ++ F E+I+ +EG++ KDL + + PG R K +K+K
Sbjct: 378 ----VDEKCKPATALITDKVEEAQELFDESIKRGNEGLMAKDLQATYTPGVRGRKMVKIK 433
Query: 443 PEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSD 502
LD+ I+ +G GR+ G + F VA A D R++ +V +G SD
Sbjct: 434 ----EVLDTLDLAIVSAEWGHGRKAGWLTSFEVA-----AYDEENDRYLVLGKVASGFSD 484
Query: 503 EELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTI 562
E+L + +LKP + +R +V + +PDV +E + I
Sbjct: 485 EQLQEMTERLKPLI----HAERG-----RVVDV---KPDVIVEVKFQEI----------Q 522
Query: 563 RSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNG 605
+S ++S+ Y+LRFPR+ RVR D + + + + S+G
Sbjct: 523 KSPIYSSGYALRFPRLVRVRDDMSPEEVNTIGRVLNIYDISHG 565
>gi|290972643|ref|XP_002669061.1| ATP dependent DNA ligase [Naegleria gruberi]
gi|284082602|gb|EFC36317.1| ATP dependent DNA ligase [Naegleria gruberi]
Length = 915
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 194/373 (52%), Gaps = 46/373 (12%)
Query: 250 ECKFDGDRIQIH--KNGSEIHYFSRSFLDHSEYG-----HAMSKIIEQNVLVDRCILDGE 302
E K+DG+RIQIH + EI YFSR+ D EY +SK I++ V + ILDGE
Sbjct: 32 ELKYDGERIQIHYDRKNDEIKYFSRNLKDVQEYKIKSVKKYISKAIKEKV--ESVILDGE 89
Query: 303 MLVWDTSLNRFAEFGS-NQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHE 361
+L+ DT N+ FG+ + + + +D +++ F FD+LY S++ L +R
Sbjct: 90 ILMMDTKTNKILPFGTLGKNVRQDHKDAVTT-----IFLFDILYYNGKSLLSVPLYKRKA 144
Query: 362 LLQKVVKPSKGRL---ETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDE 418
L+ K+V P K R+ E LV V+ + ++V+ + + I+ +E
Sbjct: 145 LMTKIVNPIKHRVMLGEYLV--------VKGSKQTREAIVSAEMSAM-------IKKGEE 189
Query: 419 GIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVAL 477
G+VLKDL S +EP R WLK+K +Y++ +D +D++++G Y G+G +GG ++ F++
Sbjct: 190 GLVLKDLCSPYEPNAR--HWLKMKKDYLKGMADSVDLVVLGAYLGTGSKGGLMSVFMMG- 246
Query: 478 AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSK 537
+ D ++ C+ G G D+ ++ + +LK ++ P + N+
Sbjct: 247 ----SFDKKLGKWRIICKCGNGHDDQTIETLNEELKSNMKRISKDPSLVPDDIDIHTNAL 302
Query: 538 ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFV 597
PD ++ P+KS++ I ++ S P S+RFPR+ ++R DK D LD ++
Sbjct: 303 -VPDFIVKDPKKSVVWEIQGAEFSVSSRK-DRPISVRFPRVTKIRDDK---DVLDHTNYQ 357
Query: 598 ELVHSSNGTTQKG 610
E++ N + +KG
Sbjct: 358 EIIKLKNESNRKG 370
>gi|347524512|ref|YP_004782082.1| DNA ligase I, ATP-dependent Dnl1 [Pyrolobus fumarii 1A]
gi|343461394|gb|AEM39830.1| DNA ligase I, ATP-dependent Dnl1 [Pyrolobus fumarii 1A]
Length = 609
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 138/506 (27%), Positives = 239/506 (47%), Gaps = 71/506 (14%)
Query: 124 LTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT++++ D L R+A + +R K+ +++ LI + + +E K+I+ I L+LG+ + +
Sbjct: 127 LTVEKVYDTLARVALTTGEGSRELKLKLVAGLIAEASPREAKYIVRFIEGRLRLGVGDAT 186
Query: 181 IFHEF----------HPDAEDLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQLA 229
I E +N+ DL LV + L + + K EVG +RP LA
Sbjct: 187 IIEALSIVYAGSAAMKHVVERAYNLRADLGLVAKILATQGVEAVKNIKPEVGIPIRPMLA 246
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE 289
R+ + +KL G+ +V E K+DG+R QIHK G +I FSR + ++ + ++
Sbjct: 247 ERLNNPVEILKKLGGRALV-EYKYDGERAQIHKKGDKIWIFSRRLENITKMYPDVVEMAL 305
Query: 290 QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG----LSSDRQLCYFAFDVLY 345
+ + + I++GE++ D F QE+ + R + + + FD+LY
Sbjct: 306 KGIKANEAIVEGEIVAIDPDTGELRPF---QELMRRKRKHDIHIAMKEVPVAVYLFDILY 362
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAH----N 401
+ + L ER + L++V+ S W L H
Sbjct: 363 RDGEDLTVKPLPERRKHLEEVLVQSD----------------------TWRLAEHIYTDK 400
Query: 402 VDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIRAGSD-LDVLIIG 458
+E+E+FF IE+ EG++ K + S+ ++ G R W+K K +Y D +D++++G
Sbjct: 401 PEELEQFFLRAIEDGAEGVMAKAVHSRSIYQAGARGWLWIKYKRDYKSEMIDTVDLVVVG 460
Query: 459 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 518
+YG GRRGG+ L+A A P DT F + C+VG+G +DE+L+ + LKPY
Sbjct: 461 AFYGKGRRGGKFGALLMA-AYDPDTDT----FKTVCKVGSGFTDEDLERLNEMLKPYIIP 515
Query: 519 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVF-----SAPYSL 573
+++P+ +SK +PDVW++ + I+ + I + A S+
Sbjct: 516 HKHPR----------VDSKMKPDVWVQPALVAEIIGAELTLSPIHTCCHGWVKPGAGISI 565
Query: 574 RFPRIDRVRYDKPWHDCLDVQSFVEL 599
RFPR R R DK D + E+
Sbjct: 566 RFPRFIRWRPDKSPEDATTTKELYEM 591
>gi|66275973|ref|YP_233058.1| ATP-dependent DNA ligase [Vaccinia virus]
gi|118776|sp|P16272.1|DNLI_VACCV RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|62230|emb|CAA34519.1| unnamed protein product [Vaccinia virus]
gi|222739|dbj|BAA01824.1| 63.3K protein [Vaccinia virus]
gi|29692282|gb|AAO89455.1| DNA ligase [Vaccinia virus WR]
Length = 552
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 142/584 (24%), Positives = 257/584 (44%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT+++++ L L+S +
Sbjct: 73 EDMLQDLGY--GYIGDTIRTFFKENTEIRPRDKSI----LTLEDVDSFLTTLSSVTKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P+A D+F + +LK + E
Sbjct: 127 QIKLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPNAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+N I V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 NASKQNL--DSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +L + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRVLQDQL-TMVKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|111184361|gb|ABH08281.1| HSPV172 [Horsepox virus]
Length = 552
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 143/584 (24%), Positives = 256/584 (43%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT+++++ L L+S
Sbjct: 73 EDMLQDLGY--GYIGDTISTFFKENTEIRPRDKSI----LTLEDVDSFLTTLSSVTKELH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDVASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+N I V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 NSSKQNLDF--ISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +LK + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRKLQDQLK-MIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|62288482|gb|AAX78496.1| unknown [synthetic construct]
Length = 578
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 142/584 (24%), Positives = 257/584 (44%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 43 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 98
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT+++++ L L+S +
Sbjct: 99 EDMLQDLGY--GYIGDTIRTFFKENTEIRPRDKSI----LTLEDVDSFLTTLSSVTKESH 152
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P+A D+F + +LK + E
Sbjct: 153 QIKLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPNAYDVFRKSNNLKEIIE 212
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+N I V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 213 NASKQNL--DSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 269
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 270 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 324
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 325 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 375
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 376 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 424
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 425 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 478
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +L + + PK+ P + N PD +E P++S I I+
Sbjct: 479 GHDDNTLRVLQDQL-TMVKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 534
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 535 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 578
>gi|390365532|ref|XP_786357.3| PREDICTED: DNA ligase 3 [Strongylocentrotus purpuratus]
Length = 974
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 224/499 (44%), Gaps = 50/499 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
L+I +++ LD ++ E+ L+ + K A ++K ++ ++ DL++ K I
Sbjct: 388 LSIYDVDKFLDNMSMMTKELEQQRELAKITGKCTANDLKMVVRLLKHDLRISSGAKHILD 447
Query: 184 EFHPDAEDLFNVTCDL-KLVCEKLKDRNQRHKRQDIEVGKAVR--------PQLAMRIGD 234
P+A + F + DL +V L ++ + + +VR P LA
Sbjct: 448 ALDPNAYEAFQASRDLLDVVSRVLANQKASNGVPGMTKKLSVRAALMTPVLPMLAEACKS 507
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
RK + E K+DG+R+QIHK G YFSRS L H + H I +
Sbjct: 508 VEMGMRKCPNG-MYAEIKYDGERVQIHKQGDNFQYFSRSLKPVLPH-KVTHIKDWIPKAC 565
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
+ ILD E+L+ D + FG+ K+A D +C F FD L+ +
Sbjct: 566 PHGNSLILDSEILMVDKD-GKILPFGTLGVHKKSA----FQDANVCLFVFDCLHFNGEDL 620
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + LK R ++L++ + R+ ++ + + R ++ +
Sbjct: 621 MDKPLKTRRKILEENLDEIPNRI--MLSESKFVTKTR---------------QLSGLIAD 663
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
I EG+VLKD+ S +EPG R WLK+K +Y++ GS D+L++G +YG+G +GG
Sbjct: 664 VIREGLEGLVLKDVQSLYEPGKR--HWLKVKKDYLKEGSMADSADLLVLGAFYGTGTKGG 721
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPS 528
++ FL+ + + P D++ R ++ C G GL D +D V L K PS
Sbjct: 722 MMSVFLMGVYD-PNSDSF--RTVTKC--GNGLDDNTMDKVNRDLD--MVKISKDSSKVPS 774
Query: 529 FYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWH 588
+ +V N PD I P+K+ + I T + S+RFPR+ R+R DK +
Sbjct: 775 WLRV--NKTLVPDFVIREPKKAPVWEIIGAEFTQSETHTAGGISIRFPRVTRIRDDKDFE 832
Query: 589 DCLDVQSFVELVHSSNGTT 607
D+ L S +T
Sbjct: 833 TATDLPRLRTLFKKSKEST 851
>gi|90819836|gb|ABD98646.1| VACV-DUKE-184 [Vaccinia virus]
Length = 552
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 143/584 (24%), Positives = 256/584 (43%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT+++++ L L+S
Sbjct: 73 EDMLQDLGY--GYIGDTISTFFKENTEIRPRDKSI----LTLEDVDSFLTTLSSVTKELH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDVASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+N I V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 NSSKQNLDF--ISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +LK + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRELQDQLK-MIKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|325558556|gb|ADZ29935.1| DNA ligase [Cowpox virus]
Length = 552
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 141/584 (24%), Positives = 256/584 (43%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ + + + LT++E++ L L+S
Sbjct: 73 EDMLQDLGY--GYIGDTISTFFKENTEIRPKDKSI----LTLEEVDSFLTTLSSVTKELH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+ Q + V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 --NESKQNLDSISVSVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +LK + + PK+ P + N PD ++ P++S I I+
Sbjct: 453 GHDDNTLRGLQDQLK-MIKINKDPKKIPE---WLVVNKIYIPDFVVDDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|281200629|gb|EFA74847.1| DNA ligase I [Polysphondylium pallidum PN500]
Length = 1072
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 188/390 (48%), Gaps = 47/390 (12%)
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLD 276
+ VG V+P LA + E E K+DG+R+QIH+ + ++ ++R+ D
Sbjct: 665 LRVGIPVKPMLAQPTNGISQVLDRFQDLEFTCEYKYDGERVQIHRHDDGKVKIYTRNLED 724
Query: 277 HS-EYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR 334
++ +Y ++ I + V ILD E + +D + + F Q ++ R G+S D+
Sbjct: 725 YTGKYPDIIANIPKFMGSEVKNFILDCEAVAFDPTNKKILPF---QILSSRPRKGVSLDQ 781
Query: 335 ---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
+C FAFD+LY+ TS+I + L R E+L+ S+G V + S++
Sbjct: 782 IKIPVCVFAFDLLYLNGTSLIDEQLSRRREVLKSNFNESEG-----VFSYAQYSNI---- 832
Query: 392 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIRAG 449
+V E++ + +E ++ EG+++K K +EP RS WLK+K +Y++
Sbjct: 833 --------SDVAEIQAYIEEAVKANCEGLMVKTFKEKSIYEPSKRSYNWLKIKKDYLKGM 884
Query: 450 SD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAV 508
+D +D++ IG +YG G+R G +L+A + D F + C++GTG SDE+L
Sbjct: 885 TDSVDIVPIGAWYGKGKRTGVYGAYLLACYDEDNED-----FQTLCKIGTGFSDEQLQQF 939
Query: 509 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS 568
+L P+ + P + Y+V+ K PDVW + +L+ I I +
Sbjct: 940 TEQLTPHII------QNPKNMYRVSEQLK--PDVWFSPKQVWEVLAADLSISPIHTAAAG 991
Query: 569 A-----PYSLRFPRIDRVRYDKPWHDCLDV 593
+LRFPR R+R DK D +
Sbjct: 992 TLDPVKGIALRFPRFIRIREDKNPEDATNT 1021
>gi|22164754|ref|NP_671667.1| EVM148 [Ectromelia virus]
gi|22123895|gb|AAM92453.1|AF523264_149 EVM148 [Ectromelia virus]
gi|383866874|gb|AFH54717.1| DNA ligase [Ectromelia virus]
Length = 554
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 142/582 (24%), Positives = 257/582 (44%), Gaps = 54/582 (9%)
Query: 27 KKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSAD 86
K++SK + T D D + ++L+LP LD + K+ + ++ + D
Sbjct: 21 KEKSKLIRDFITDRDDTDTYLIIKLLLPGLDDRMYNMNDKQIIKLYSIV----FKQSQED 76
Query: 87 AVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKI 146
++ + + G F E+ R + + LT++E++ L L+S + +I
Sbjct: 77 MLQDLGY--GYIGDTIRTFFKENTEIRPRDKSI----LTLEEVDSFLTTLSSVTKESHQI 130
Query: 147 SVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKL 206
+L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 131 KLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIENA 190
Query: 207 KDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSE 266
+N I V + P LA + A++K + E K+DG+R+Q+HK +E
Sbjct: 191 AKQNL--DSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKKNNE 247
Query: 267 IHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIA 323
+FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 248 FAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS----L 301
Query: 324 KAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGL 383
+ + +C F FD L+ + L ER L+ V+ +P+ +
Sbjct: 302 GIHKKKEYKNSNMCLFVFDCLHFDGFDMTDIPLYERRSFLKDVM--------VEIPNRIV 353
Query: 384 NSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKP 443
S + N ++ + + + EG+VLKD+ +EPG R +WLK+K
Sbjct: 354 FSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIKR 402
Query: 444 EYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 500
+Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +G
Sbjct: 403 DYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SGH 456
Query: 501 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIR 560
D L + +LK + + PK+ P + N PD +E P++S I I+
Sbjct: 457 DDNTLRVLQDQLK-MVKINKDPKKIP---VWLVVNKIYIPDFVVEDPKQSQIWEISGAEF 512
Query: 561 TIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 513 TSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 554
>gi|196007104|ref|XP_002113418.1| hypothetical protein TRIADDRAFT_57566 [Trichoplax adhaerens]
gi|190583822|gb|EDV23892.1| hypothetical protein TRIADDRAFT_57566 [Trichoplax adhaerens]
Length = 823
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 148/584 (25%), Positives = 258/584 (44%), Gaps = 78/584 (13%)
Query: 44 DYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAG 103
D + ++L+LP + E+ Y L+ L D L + KG A
Sbjct: 175 DIYLLMKLLLPGI--EKRVYNLQSRQLIKLFSQIFVCDYDEM----LEDLDKGDVAETIT 228
Query: 104 NFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKW 163
+F V + + LT++E++DLLD L++ ++ VL + ++ +++++
Sbjct: 229 DFFANNTAVAPLNRSL----LTMQEVDDLLDELSNVTKEDMQLKVLKKIARRCTTEDLRY 284
Query: 164 IIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKL----KDRNQRHK----- 214
II +I DL++ + I +A + + DL+ V ++ DRN
Sbjct: 285 IIRLIKHDLRINAGSRHILDALDKNAHAAYQASSDLRDVVDRCLARKTDRNNDDDDGAPK 344
Query: 215 -RQDIEVGKA----VRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHY 269
++D+ + + VRP LA + A +K K + E K+DG+R+QIHKNG + Y
Sbjct: 345 LKRDLSIRASLMTPVRPMLAEACKSINTAIKKC-PKGMFAEIKYDGERVQIHKNGQQFEY 403
Query: 270 FSRSFLDHSEYGHAMSKIIEQNVLVDRC------ILDGEMLVWDTSLNRFAEFGSNQEIA 323
+SRS H + I + L C ILD E+L+ D + + FG+
Sbjct: 404 YSRSL--KQVMPHKVKDI--KQYLPQACPHGNSIILDSEVLLVDKT-GKPLPFGT----L 454
Query: 324 KAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGL 383
+ SD +C F FD L+ + L + ++L+ V+ GR+ ++ + L
Sbjct: 455 GVHKKQNFSDATVCLFIFDCLHFNG-----KDLMQTRKILESNVQEIPGRI--MLSEKKL 507
Query: 384 NSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKP 443
+E+ I EG+VLKD+ S +EPG R WLK+K
Sbjct: 508 ---------------VQKENELTGLVSRVIREGLEGLVLKDVESVYEPGKRH--WLKIKK 550
Query: 444 EYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 500
+Y+ GS D++++G YYG+G +GG ++ FL+ D R+ + + G G
Sbjct: 551 DYLAEGSMADSADLVVLGAYYGTGNKGGVMSVFLMG-----TYDERSGRWRTVAKCGNGH 605
Query: 501 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIR 560
D+ LD + +L ++ K P + V + PD + P+ + + IT
Sbjct: 606 DDKTLDKINKELSVVKISKDFSK--VPGWLNV--HRSLVPDFIVTDPKTAPVWEITG-AE 660
Query: 561 TIRSEVFSAP-YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSS 603
+S V +A S+RFPR+ R+R DK W + ++ L +S
Sbjct: 661 FSQSTVHTADGISIRFPRVTRIRDDKDWTNATNLDRLKTLYENS 704
>gi|327507709|sp|P0CL74.1|DNLI_PYRAY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|12054709|emb|CAC20743.1| DNA ligase [Pyrococcus abyssi]
Length = 559
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 155/616 (25%), Positives = 278/616 (45%), Gaps = 97/616 (15%)
Query: 10 IVLVSLFNWIQKTKPAAKKRSKFRKFLDTYC-DSVDYFSALRL--ILPSLDRERGSYGLK 66
I L L+ ++KT K FL D +++ L L + P D ER G+
Sbjct: 4 IELAQLYQKLEKTTMKLIKTRLVADFLKKVPEDHLEFIPYLILGDVFPEWD-ER-ELGVG 61
Query: 67 ESVLANCLIDALGM-SKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQ--GMISGG 123
E +L + A G+ SK+ ++V+ + G+ A ++RR+ S
Sbjct: 62 EKLLIKAVSMATGIDSKEIENSVK-----------DTGDLGESIALAVKRRKQKSFFSQP 110
Query: 124 LTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE-- 178
LTIK + L ++A + +K+ L+ L E K+I +L ++ G++E
Sbjct: 111 LTIKRVYQTLVKVAETTGEGSQDKKMKYLANLFMDAEPIEAKYIARTVLGTMRTGVAEGL 170
Query: 179 --KSIFHEFHPDAEDL---FNVTCDLKLVCEKLK-DRNQRHKRQDIEVGKAVRPQLAMRI 232
+I F+ E + + +T D V + K + N + I++GK ++P LA +
Sbjct: 171 LRDAISLAFNVKVELVERAYMLTSDFGFVAKIAKTEGNDGLAKVTIQIGKPIKPMLAQQA 230
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNV 292
+ A ++ G E E K+DG R+Q+HK+G ++ +SR + + + + I++ +
Sbjct: 231 ANIKEALLEMGG-EAEFEIKYDGARVQVHKDGEKVTIYSRRLENVTRAIPEIVEAIKEAL 289
Query: 293 LVDRCILDGEM---------LVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDV 343
+ I++GE+ L + L RF + +E+ + L+ FDV
Sbjct: 290 KPAKAIVEGELVAIGEDGRPLPFQYVLRRFRRKYNIEEMMEKIPLELN--------LFDV 341
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
LYV S+I ER + L+++V+ + G+++ +L+ NV+
Sbjct: 342 LYVDGVSLIDTKFMERRKKLEEIVE-ANGKVKI-----------------AENLITKNVE 383
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGS 463
E E+F+K +E EG++ K L + +EPG+R KWLK+KP +LD++IIG +G
Sbjct: 384 EAEQFYKRALEMGHEGLMAKRLDAIYEPGNRGKKWLKIKPTM----ENLDLVIIGAEWGE 439
Query: 464 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
GRR + F++ A D F+ +VG+G +D++L L+P K E +
Sbjct: 440 GRRAHLLGSFILG-----AYDPETGEFLEVGKVGSGFTDDDLVEFTKMLRPLIIKEEGKR 494
Query: 524 RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 583
VWI+ K +I +I+ +S + + ++LRFPR +R
Sbjct: 495 ------------------VWIQP--KVVIEVTYQEIQ--KSPKYRSGFALRFPRYVALRE 532
Query: 584 DKPWHDCLDVQSFVEL 599
DK D ++ +L
Sbjct: 533 DKGPEDADTIERIAQL 548
>gi|159041690|ref|YP_001540942.1| ATP-dependent DNA ligase [Caldivirga maquilingensis IC-167]
gi|224487902|sp|A8MDU6.1|DNLI_CALMQ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|157920525|gb|ABW01952.1| DNA ligase I, ATP-dependent Dnl1 [Caldivirga maquilingensis IC-167]
Length = 603
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 163/621 (26%), Positives = 270/621 (43%), Gaps = 94/621 (15%)
Query: 20 QKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSL--DRERGSYGLKESVLANCLIDA 77
Q+T A S K D V YF +L SL D E GL E + + A
Sbjct: 22 QRTVMAKALSSLLAKTPPQVIDKVIYF-----LLGSLRPDWEGVELGLAERLTLRAISMA 76
Query: 78 LGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQG------MISGG----LTIK 127
G+ + + ++K G +AG AAE+ + + G I G LTI
Sbjct: 77 TGLPIRQVEEL----YKKLG---DAGEVAKRAAEIKRSKGGGGTIFDFIDTGPKRRLTIS 129
Query: 128 ELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHE 184
++ D L +A + K+ +LS+L+ E K+I ++ L+LG+++ +I
Sbjct: 130 KVYDTLMAIAKASGEGAQDTKVKLLSSLLTDAEPDEAKYITRFVIGRLRLGVADMTILDA 189
Query: 185 FHPDAEDL--------FNVTCDLKLVCEKLKDRNQRH-KRQDIEVGKAVRPQLAMRIGDA 235
DA D+ ++V DL + + L + + K + G ++P LA R+
Sbjct: 190 LS-DAFDVNRDLLEKAYHVYPDLGKIAKTLAEGGEEAVKAIKVTPGVPIQPMLAERLSSP 248
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLV 294
KL G + E K+DG+R+QIHK + FSR D + +++ + +
Sbjct: 249 KEILNKLGGV-AICEFKYDGERMQIHKLKDGTVKIFSRRMEDITNQYPDVAEYAREAIDA 307
Query: 295 DRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG----LSSDRQLCYFAFDVLYVGDTS 350
+ I++GE + D F F QE+ R + + + FDV+YV
Sbjct: 308 EEFIVEGEGVAIDPDTGEFKPF---QELMHRKRKHNIKEAIEEYPINLYLFDVMYVNGQD 364
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
+ L +R ++L ++KP + HV W ++ + D +EKFF
Sbjct: 365 LTDLPLPDRKKVLFSIIKP--------------HEHVH---HADW-IITDDADSLEKFFL 406
Query: 411 ETIENRDEGIVLKD--LGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRG 467
+ I + EG++ K LGS +E G R W+K K +Y SD +D++++G ++G G+R
Sbjct: 407 DAISSGCEGVMCKSVKLGSVYEMGARGWLWIKYKRDYKSELSDTMDLVVVGAFWGRGKRA 466
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G L+A + PD+ +F + C+VG+G +DE+L + L+PY + +P+
Sbjct: 467 GTYGALLLAAYD---PDS--DQFYTVCKVGSGFTDEDLKKLPQMLEPYKIPHRHPRVV-- 519
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSIT------SDIRTIRSEVFSAPYSL--RFPRID 579
SK PD+W ++L IT S + T S + L RFPR
Sbjct: 520 --------SKMEPDIWFTP---GLVLEITGAEITMSPLHTCCSVMLKGDVGLAIRFPRFT 568
Query: 580 -RVRYDKPWHDCLDVQSFVEL 599
R R DK D V+ E+
Sbjct: 569 GRYRTDKRPEDATTVKEIFEM 589
>gi|330835781|ref|YP_004410509.1| ATP-dependent DNA ligase [Metallosphaera cuprina Ar-4]
gi|329567920|gb|AEB96025.1| ATP-dependent DNA ligase [Metallosphaera cuprina Ar-4]
Length = 598
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 131/509 (25%), Positives = 244/509 (47%), Gaps = 80/509 (15%)
Query: 124 LTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
L ++E+ + L ++A+S +R KI + +++K E K+++ + L+LGI + +
Sbjct: 120 LEVEEVYEDLVKIATSSGEGSRDVKIRTFAGILRKATPLEAKYLVRFVEGRLRLGIGDAT 179
Query: 181 IFH----------EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEV--GKAVRPQL 228
+ E+ P E +N+ DL + K+ D K + I G +RP L
Sbjct: 180 VLDALAITFGGSTEYRPIVERAYNLRADLGEIA-KIIDAYGIEKLKTISPTPGIPIRPML 238
Query: 229 AMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKII 288
A R+ D K++G +V + K+DG+R QIHK G +I+ FSR + + + +
Sbjct: 239 AERLADPAEIMEKVNGNALV-DYKYDGERAQIHKKGEDIYIFSRRMENITNQYIDVVDYV 297
Query: 289 EQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG----LSSDRQLCYFAFDVL 344
++ + D I++GE++ D F QE+ R ++ + F FD++
Sbjct: 298 KKFINGDNFIIEGEIVPIDPESGEMRPF---QELMHRRRKNDIYQAINEYPVSLFLFDLM 354
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
+ + L +R L+ ++K N VR ++ ++V++
Sbjct: 355 LLNGQDYTTRPLLDRRAALESIIKE--------------NDKVRIASH----IMVNDVNK 396
Query: 405 VEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYY 461
++++F + + + EG+++K + S ++ G R W+KLK +Y +D +D++++G +Y
Sbjct: 397 LKEYFYQAVADGAEGVMIKSVSPDSVYKAGSRGWLWIKLKRDYQSEMADTVDLVVVGAFY 456
Query: 462 GSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 521
G G+RGG+ + L+A A P D F + C+V +G SD+ELD + K++ R ++
Sbjct: 457 GKGKRGGKFSSLLMA-AYNPEKDV----FETVCKVASGFSDQELDELQKKIEQLKRDEKH 511
Query: 522 PKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP----------- 570
P+ ++N S PDVW+ SP +I ++I I +E+ +P
Sbjct: 512 PR-------VISNMS---PDVWV-SP------AIVAEI--IGAEITISPLHTCCKNDKAG 552
Query: 571 YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
S+RFPR R R DK D Q +E+
Sbjct: 553 LSIRFPRFVRWRDDKSPEDATTNQEIMEM 581
>gi|388579226|gb|EIM19552.1| ATP-dependent DNA ligase [Wallemia sebi CBS 633.66]
Length = 643
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 145/579 (25%), Positives = 258/579 (44%), Gaps = 93/579 (16%)
Query: 57 DRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRR 116
D E G+ ES+L ++++ G + + G+ VA + +
Sbjct: 101 DYEGLELGIGESILIKAVVESTGRT----------TAKVKEELKKVGDLGTVAQSARKNQ 150
Query: 117 QGMI-SGGLTIKELNDLLDRLAS---SENRAEKISVLSTLIK--KTNAQEMKWIIMIILK 170
M S L + + L +A+ S+++ +KI ++ ++ +N E+K++I ++
Sbjct: 151 PTMFKSKDLNVPTVFKNLKEIATASGSQSQTKKIGIIMKMLTSCNSNTNEVKFLIRLLEG 210
Query: 171 DLKLGISEKSIFHEF--------HPDA--EDL----------FNVTCDLKLVCEKLKDR- 209
L++G++EK++ + DA EDL ++ L+ L D
Sbjct: 211 KLRIGLAEKTVVVSLANAIVLSNNEDATKEDLERGVEIVKQVYSELPSYDLIIPALLDGG 270
Query: 210 -NQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIH 268
+ +R + G ++P LA + G+ E K+DG+R QIH + ++
Sbjct: 271 VDNLQERCHLTPGIPLKPMLAKPTKAVTEVLDRFEGRSFTCEYKYDGERAQIHYHDGKVK 330
Query: 269 YFSRSFLDHSEYGHAMSKIIEQ-----NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIA 323
FSR+ D S ++EQ V ++D E + +D + F QE+
Sbjct: 331 VFSRNSEDMS---MKYPDLVEQLPRAIKPGVKNFVIDSEAVAFDKQTKKILPF---QELT 384
Query: 324 KAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPD 380
+ R + + ++ FAFD+LY D ++H+ L R E+L ET+ +
Sbjct: 385 RRKRKDVKVEDITVKVHIFAFDLLYFNDKPLLHEDLTRRREMLS-------DNFETVEDE 437
Query: 381 HGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLK-DLG-SKW-EPGDRSGK 437
+ S+ A + +E++ F +E++++ EG+++K + G S W P RS
Sbjct: 438 FAM----------AKSMEAQSTEEIQAFLEESVKDSCEGLMVKMNQGESAWYTPSKRSMN 487
Query: 438 WLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRV 496
WLKLK +Y+ G LD+++IGGYYG G+R +L+A ++ + + S C++
Sbjct: 488 WLKLKKDYLSGVGDSLDLVVIGGYYGKGKRTNVYGAYLLACYDQDS-----ESYQSICKI 542
Query: 497 GTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEK-----SI 551
GTG S+E LD+ L P AP S+Y++ +PDV+ E P+ +
Sbjct: 543 GTGFSEEMLDSHYKLLNP------LEITAPKSYYKL---GSAKPDVYFE-PQAVWEVLTA 592
Query: 552 ILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDC 590
LS++ E+ SLRFPR RVR DK D
Sbjct: 593 DLSLSPVYTAAAGEISERGISLRFPRFIRVRDDKAADDA 631
>gi|14423676|sp|Q9HHC4.2|DNLI_PYRKO RecName: Full=DNA ligase; AltName: Full=Lig(Tk); AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
Length = 559
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 225/488 (46%), Gaps = 62/488 (12%)
Query: 124 LTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE-- 178
LTIK + D ++A ++ K+ L+ L +E K++ +L ++ G++E
Sbjct: 111 LTIKRVYDTFVKIAEAQGEGSQDRKMKYLANLFMDAEPEEGKYLARTVLGTMRTGVAEGI 170
Query: 179 --KSIFHEFH--PD-AEDLFNVTCDLKLVCEKLK-DRNQRHKRQDIEVGKAVRPQLAMRI 232
+I F P+ E + +T D V + K + N+ + I++GK +RP LA
Sbjct: 171 LRDAIAEAFRVKPELVERAYMLTSDFGYVAKIAKLEGNEGLSKVRIQIGKPIRPMLAQNA 230
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNV 292
A ++ G E E K+DG R+Q+HK+G ++ +SR + + + + I+ +
Sbjct: 231 ASVKDALIEMGG-EAAFEIKYDGARVQVHKDGDKVIVYSRRLENVTRSIPEVIEAIKAAL 289
Query: 293 LVDRCILDGEML-VWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
++ I++GE++ V + R ++ + K D + L FDV++V S+
Sbjct: 290 KPEKAIVEGELVAVGENGRPRPFQYVLRRFRRKYNIDEMIEKIPLELNLFDVMFVDGESL 349
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
I +R L+++VK S+ + + L+ V+E E F++
Sbjct: 350 IETKFIDRRNKLEEIVKESE------------------KIKLAEQLITKKVEEAEAFYRR 391
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVA 471
+E EG++ K L S +EPG+R KWLK+KP +LD++IIG +G GRR +
Sbjct: 392 ALELGHEGLMAKRLDSIYEPGNRGKKWLKIKPTM----ENLDLVIIGAEWGEGRRAHLLG 447
Query: 472 QFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQ 531
FLVA A D + F+ +VG+G +DE+L LKPY + E
Sbjct: 448 SFLVA-----AYDPHSGEFLPVGKVGSGFTDEDLVEFTKMLKPYIVRQE----------- 491
Query: 532 VTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCL 591
++E K +I +I+ +S + + ++LRFPR +R DK +
Sbjct: 492 ---------GKFVEIEPKFVIEVTYQEIQ--KSPKYKSGFALRFPRYVALREDKSPEEAD 540
Query: 592 DVQSFVEL 599
++ EL
Sbjct: 541 TIERVAEL 548
>gi|57642075|ref|YP_184553.1| ATP-dependent DNA ligase [Thermococcus kodakarensis KOD1]
gi|10566815|dbj|BAB15949.1| DNA ligase [Thermococcus kodakaraensis]
gi|57160399|dbj|BAD86329.1| ATP-dependent DNA ligase [Thermococcus kodakarensis KOD1]
Length = 562
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 225/488 (46%), Gaps = 62/488 (12%)
Query: 124 LTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE-- 178
LTIK + D ++A ++ K+ L+ L +E K++ +L ++ G++E
Sbjct: 114 LTIKRVYDTFVKIAEAQGEGSQDRKMKYLANLFMDAEPEEGKYLARTVLGTMRTGVAEGI 173
Query: 179 --KSIFHEFH--PD-AEDLFNVTCDLKLVCEKLK-DRNQRHKRQDIEVGKAVRPQLAMRI 232
+I F P+ E + +T D V + K + N+ + I++GK +RP LA
Sbjct: 174 LRDAIAEAFRVKPELVERAYMLTSDFGYVAKIAKLEGNEGLSKVRIQIGKPIRPMLAQNA 233
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNV 292
A ++ G E E K+DG R+Q+HK+G ++ +SR + + + + I+ +
Sbjct: 234 ASVKDALIEMGG-EAAFEIKYDGARVQVHKDGDKVIVYSRRLENVTRSIPEVIEAIKAAL 292
Query: 293 LVDRCILDGEML-VWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
++ I++GE++ V + R ++ + K D + L FDV++V S+
Sbjct: 293 KPEKAIVEGELVAVGENGRPRPFQYVLRRFRRKYNIDEMIEKIPLELNLFDVMFVDGESL 352
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
I +R L+++VK S+ + + L+ V+E E F++
Sbjct: 353 IETKFIDRRNKLEEIVKESE------------------KIKLAEQLITKKVEEAEAFYRR 394
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVA 471
+E EG++ K L S +EPG+R KWLK+KP +LD++IIG +G GRR +
Sbjct: 395 ALELGHEGLMAKRLDSIYEPGNRGKKWLKIKPTM----ENLDLVIIGAEWGEGRRAHLLG 450
Query: 472 QFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQ 531
FLVA A D + F+ +VG+G +DE+L LKPY + E
Sbjct: 451 SFLVA-----AYDPHSGEFLPVGKVGSGFTDEDLVEFTKMLKPYIVRQE----------- 494
Query: 532 VTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCL 591
++E K +I +I+ +S + + ++LRFPR +R DK +
Sbjct: 495 ---------GKFVEIEPKFVIEVTYQEIQ--KSPKYKSGFALRFPRYVALREDKSPEEAD 543
Query: 592 DVQSFVEL 599
++ EL
Sbjct: 544 TIERVAEL 551
>gi|452823268|gb|EME30280.1| DNA ligase 1 [Galdieria sulphuraria]
Length = 741
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 171/622 (27%), Positives = 272/622 (43%), Gaps = 98/622 (15%)
Query: 32 FRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLK--ESVLANCLIDALGMSKDSADAVR 89
FRK ++T D D + L L LK E+ + N L A G ++V+
Sbjct: 156 FRKIVNTTPD--DLLPCVYLCTNMLGPAHEGLELKAGEATVLNALSSATG------NSVK 207
Query: 90 LINWRKGGAAPNAGNFPMVAAEVLQRRQGMISG-GLTIKELND---LLDRLASSENRAEK 145
++ R G+ +AAE +Q M LTI+ + + LA + E+
Sbjct: 208 VLKER----LIKLGDIGDLAAECRTTQQTMFKPPSLTIQGVYQEFRTMANLAGKMSTKER 263
Query: 146 ISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHE----FHP-------DAEDLFN 194
L L+ +QE K+I I+L L++ I+ K++ F P A+++ +
Sbjct: 264 EKHLQKLLVSATSQEAKYIARIVLGKLRIHIAYKTVIASLATVFAPCSKTVGKTADEMDS 323
Query: 195 V----TCDLKLVCEKLK--DRN-----QRHKRQDIE------VGKAVRPQLAMRIGDAHA 237
+ T L V +L DR Q Q +E G V P LA +A
Sbjct: 324 IVKEATATLNAVYSQLPMWDRIIPVLIQNKSTQGLEDHCRLTPGVPVGPMLAKPAKEASD 383
Query: 238 AWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHS-EYGHAMSKI---IEQN 291
+ V E K+DG R QIH +G+ + FSR+ D + +Y + I + +N
Sbjct: 384 VLERFQECSFVCEYKYDGMRAQIHYLPDGN-VKIFSRNAEDDTPKYPDIVENIKFALSKN 442
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGD 348
V I+D E++ +D N F QE+ AR + + +C FAFD+L+
Sbjct: 443 KAVRSFIIDSEVVAYDPETNVMKSF---QELQGRARKEVKLEDIKVSVCVFAFDILFFNG 499
Query: 349 TSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKF 408
S++ SLKER E L + P +G+ + S V + + V++
Sbjct: 500 ESLLKWSLKERREKLIETFSPVQGKFQFTT-----------------SKVFTDWEGVDEM 542
Query: 409 FKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSG 464
E I+ EG+++K L S +EP +RS WLK+K +Y+ + G LD++ IG YYG G
Sbjct: 543 MDEAIQAGCEGLMIKALTGEYSSYEPSNRSQNWLKMKKDYMNSIGDSLDLVPIGAYYGRG 602
Query: 465 RRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 524
+R G FL+A ++ F + C++GTG SDE L ++ F K +
Sbjct: 603 KRSGVFGAFLLACY-----NSETEEFQTVCKLGTGFSDEFLSSITK-----FYKDGHILA 652
Query: 525 APPSFYQVTNNSKERPDVWI------ESPEKSIILSIT-SDIRTIRSEVFSAPYSLRFPR 577
P +Y V+++ PDVW E+ + LS + + + + SE +LRFPR
Sbjct: 653 EPKPYYGVSDSPTIIPDVWFDPCQVWETRCADLTLSPSHTAAKGMLSEEDKG-IALRFPR 711
Query: 578 IDRVRYDKPWHDCLDVQSFVEL 599
R+R DK D + VEL
Sbjct: 712 FIRIREDKSVDDATTAEQIVEL 733
>gi|24762424|ref|NP_611843.2| DNA ligase I [Drosophila melanogaster]
gi|75027832|sp|Q9W1H4.2|DNLI1_DROME RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; Short=DmDNA
Lig I
gi|23240139|gb|AAF47090.3| DNA ligase I [Drosophila melanogaster]
gi|54650818|gb|AAV36988.1| LD20955p [Drosophila melanogaster]
Length = 747
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 137/554 (24%), Positives = 252/554 (45%), Gaps = 90/554 (16%)
Query: 102 AGNFPMVAAEV-LQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQE 160
G+ +VA + + +R L ++++ L +A ++ K+ ++ + + E
Sbjct: 214 TGDLGIVAEQSRVSQRMMFQPAPLNVRDVFRKLREIAKLSGQS-KMDLVYNMFVACRSSE 272
Query: 161 MKWIIMIILKDLKLGISEKSIFHEFH-----------------PDA--EDLFNVTCDLK- 200
++ I ++ L++GI+E+S+ PD +++ + T LK
Sbjct: 273 ARFFIRSLIGKLRIGIAEQSLLTALAIGLVKKNHIDDCKASKVPDVYKDEIVDTTLLLKT 332
Query: 201 ----------LVCEKLK-DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVI 249
++ LK D + +R + G +RP LA H + + G ++
Sbjct: 333 AYCQCPNYDIIIPAILKYDIKELQERCPMHPGMPLRPMLAQPTKGVHEVFERFGGMQITC 392
Query: 250 ECKFDGDRIQIHKN-GSEIHYFSRSFLDHS-EYGHAMSK---IIEQNVLVDRCILDGEML 304
E K+DG+R QIH+N EI FSR+ +++ +Y +++ +++ + V I+D E++
Sbjct: 393 EWKYDGERAQIHRNEKGEISIFSRNSENNTAKYPDLIARSTALLKGD--VKSYIIDSEIV 450
Query: 305 VWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHE 361
WD + F Q ++ R + + Q+C + FD+LY+ T+++ ++L ER +
Sbjct: 451 AWDVERKQILPF---QVLSTRKRKNVDIEEIKVQVCVYIFDLLYINGTALVTKNLSERRK 507
Query: 362 LLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIV 421
LL + + +G + +L +++DEV++F +E+I+ EG++
Sbjct: 508 LLLEHFQEVEGEWKFAT-----------------ALDTNDIDEVQQFLEESIKGNCEGLM 550
Query: 422 LKDLG--SKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALA 478
+K L + +E RS WLKLK +Y+ G LD+++IGGY G GRR G FL+A
Sbjct: 551 VKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGTYGGFLLACY 610
Query: 479 ERPAPDTYPRRFISFCRVGTGLSDEELDA--------VVTKLKPYFRKYEYPKRAPPSFY 530
DT + S C++GTG +DE+L V + K Y+R Y+ P P ++
Sbjct: 611 -----DTENEEYQSICKIGTGFTDEDLQTHSEFLGKHVTSAAKSYYR-YD-PSLEPDHWF 663
Query: 531 QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDC 590
+ + + SP + I R I SLRFPR R+R DK +
Sbjct: 664 EPVQVWEVKCADLSLSPIHRAAIGIVDGERGI---------SLRFPRFIRIRDDKNSENA 714
Query: 591 LDVQSFVELVHSSN 604
D + S +
Sbjct: 715 TDANQVAHMYQSQD 728
>gi|195347251|ref|XP_002040167.1| GM16058 [Drosophila sechellia]
gi|194135516|gb|EDW57032.1| GM16058 [Drosophila sechellia]
Length = 747
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 196/416 (47%), Gaps = 57/416 (13%)
Query: 208 DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKN-GSE 266
D + +R + G +RP LA H + + G ++ E K+DG+R QIH+N E
Sbjct: 351 DIKELQERCPMHPGMPLRPMLAQPTKGVHEVFERFGGMQITCEWKYDGERAQIHRNEKGE 410
Query: 267 IHYFSRSFLDHS-EYGHAMSKIIEQNVL---VDRCILDGEMLVWDTSLNRFAEFGSNQEI 322
I FSR+ +++ +Y +++ +L V I+D E++ WD + F Q +
Sbjct: 411 ISIFSRNSENNTAKYPDLIAR--STGLLKGDVKSYIIDSEIVAWDVERKQILPF---QVL 465
Query: 323 AKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVP 379
+ R + + Q+C + FD+LY+ T+++ ++L ER +LL + + +G +
Sbjct: 466 STRKRKNVDIEEIKVQVCVYIFDLLYINGTALVTKNLSERRKLLLEHFQEVEGEWKFAT- 524
Query: 380 DHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGK 437
+L +++DEV++F +E+I+ EG+++K L + +E RS
Sbjct: 525 ----------------ALDTNDIDEVQQFLEESIKGNCEGLMVKTLDEEATYEIAKRSRN 568
Query: 438 WLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRV 496
WLKLK +Y+ G LD+++IGGY G GRR G FL+A DT + S C++
Sbjct: 569 WLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGTYGGFLLACY-----DTENEEYQSICKI 623
Query: 497 GTGLSDEELDA--------VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE 548
GTG +DE+L V + K Y+R Y+ P P +++ + + SP
Sbjct: 624 GTGFTDEDLQTHSEFLGKHVTSAAKSYYR-YD-PSLEPDHWFEPVQVWEVKCADLSLSPI 681
Query: 549 KSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSN 604
+ I R I SLRFPR R+R DK + D + S +
Sbjct: 682 HRAAIGIVDGERGI---------SLRFPRFIRIRDDKNSENATDANQVAHMYQSQD 728
>gi|241614142|ref|XP_002406581.1| DNA ligase, putative [Ixodes scapularis]
gi|215500833|gb|EEC10327.1| DNA ligase, putative [Ixodes scapularis]
Length = 851
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 219/472 (46%), Gaps = 51/472 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LT+++++ LDRL+ ++ +L L + + ++K ++ +I D+++ K I
Sbjct: 272 LTLQDVDHHLDRLSRLTREDDQEQLLRHLSVRCTSNDLKMVVRLIKHDIRINSGPKHILE 331
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVR----PQLAMRIGDAHAAW 239
HP+A F + +L+ V K+ N + V ++ P LA G AA+
Sbjct: 332 ALHPNAYQSFQASRNLEDVVRTAKEGN-------VSVSASLMTPMIPMLAEPCGSPDAAF 384
Query: 240 RKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYG--HAMSKIIEQNVLVDRC 297
+ + E K+DG+R+Q+HK GS +FSRS S + H I +
Sbjct: 385 ARCPDG-MYAEIKYDGERVQLHKQGSNFLFFSRSLKPVSPHKVQHLKDFIPKAFPHGKDL 443
Query: 298 ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLK 357
+LD E+L+ DT + FG+ +AA D +C F FD L+ S++ L+
Sbjct: 444 VLDSEILMVDTQTGKPLPFGTLGIHKRAA----FKDASVCLFVFDCLHYNGRSLLDTPLR 499
Query: 358 ERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRD 417
+R E+LQ + P K +H + S V D++++ + +
Sbjct: 500 QRREVLQANMTPIK--------NHVMFSEKH---------VIKTRDQLQELIADVLNQGL 542
Query: 418 EGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFL 474
EG+VLKD +EPG R W+K+K +Y+ GS D+ ++G Y+G+G +GG ++ FL
Sbjct: 543 EGLVLKDPDGVYEPGKRH--WMKVKKDYLEGGSMADSADLAVLGAYFGTGNKGGIMSIFL 600
Query: 475 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN 534
+ PA R+ + +V G D L+ + T+L+ K P + V
Sbjct: 601 MGCWN-PATG----RWCTVTKVHGGHDDTTLERLQTELE--MTKISKQADRVPRWLDV-- 651
Query: 535 NSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDK 585
PD + P + + I S R+E+ +A S+RFPR+ R+RYDK
Sbjct: 652 QKPLVPDFVAKDPNNTQVWEI-SGAEFTRAEIHTADGISIRFPRVTRIRYDK 702
>gi|195586207|ref|XP_002082869.1| GD11806 [Drosophila simulans]
gi|194194878|gb|EDX08454.1| GD11806 [Drosophila simulans]
Length = 713
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 196/416 (47%), Gaps = 57/416 (13%)
Query: 208 DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKN-GSE 266
D + +R + G +RP LA H + + G ++ E K+DG+R QIH+N E
Sbjct: 317 DIKELQERCPMHPGMPLRPMLAQPTKGVHEVFERFGGMQITCEWKYDGERAQIHRNEKGE 376
Query: 267 IHYFSRSFLDHS-EYGHAMSKIIEQNVL---VDRCILDGEMLVWDTSLNRFAEFGSNQEI 322
I FSR+ +++ +Y +++ +L V I+D E++ WD + F Q +
Sbjct: 377 ISIFSRNSENNTAKYPDLIAR--STGLLKGDVKSYIIDSEIVAWDVERKQILPF---QVL 431
Query: 323 AKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVP 379
+ R + + Q+C + FD+LY+ T+++ ++L ER +LL + + +G +
Sbjct: 432 STRKRKNVDIEEIKVQVCVYIFDLLYINGTALVTKNLSERRKLLLEHFQEVEGEWKFAT- 490
Query: 380 DHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGK 437
+L +++DEV++F +E+I+ EG+++K L + +E RS
Sbjct: 491 ----------------ALDTNDIDEVQQFLEESIKGNCEGLMVKTLDEEATYEIAKRSRN 534
Query: 438 WLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRV 496
WLKLK +Y+ G LD+++IGGY G GRR G FL+A DT + S C++
Sbjct: 535 WLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGTYGGFLLACY-----DTENEEYQSICKI 589
Query: 497 GTGLSDEELDA--------VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE 548
GTG +DE+L V + K Y+R Y+ P P +++ + + SP
Sbjct: 590 GTGFTDEDLQTHSEFLGKHVTSAAKSYYR-YD-PSLEPDHWFEPVQVWEVKCADLSLSPI 647
Query: 549 KSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSN 604
+ I R I SLRFPR R+R DK + D + S +
Sbjct: 648 HRAAIGIVDGERGI---------SLRFPRFIRIRDDKNSENATDANQVAHMYQSQD 694
>gi|260801006|ref|XP_002595387.1| hypothetical protein BRAFLDRAFT_69217 [Branchiostoma floridae]
gi|229280633|gb|EEN51399.1| hypothetical protein BRAFLDRAFT_69217 [Branchiostoma floridae]
Length = 952
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 193/414 (46%), Gaps = 48/414 (11%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDH- 277
G ++P LA R+ G E E K+DG+R QIH +NG EIH +SR+ ++
Sbjct: 569 GTPLKPMLAHPTKGVSEVLRRFEGAEFTCEYKYDGERAQIHMLENG-EIHIYSRNQENNT 627
Query: 278 SEYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL 336
S+Y + ++ + N V CI+D E + WD + F + D Q+
Sbjct: 628 SKYPDIIERMPKVNHDDVTSCIIDSEAVAWDPENKKILPFQVLSTRKRKDADQSEIKVQV 687
Query: 337 CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
C +AFD+LY+ S++ + ++R E+L++ +G S
Sbjct: 688 CVYAFDLLYLNGQSLVREPFRKRREMLRESFNEVEGEFVFAT-----------------S 730
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDLD 453
+V+ N +E+ F +I++ EG+++K D + +E RS WLKLK +Y+ G LD
Sbjct: 731 MVSGNTEEIAVFLDASIKDSCEGLMVKTLDKDATYEIAKRSHNWLKLKKDYLDGVGDTLD 790
Query: 454 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 513
V+ IGG+ G+G+R G+ FL+A F S C++GTG DEEL+
Sbjct: 791 VVPIGGFLGTGKRTGKYGGFLLACYSE-----EDEEFQSICKIGTGFKDEELEQHTE--- 842
Query: 514 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSA 569
+F+ + K P S+Y+ +S PD W ++ + K LSI+ + +E
Sbjct: 843 -FFKNHVVDK--PKSYYRY--DSSVEPDHWFDAVQVWEIKCADLSISPVHKA--AEGIVD 895
Query: 570 P---YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGT-TQKGKEYGGLQDD 619
P SLRFPR R+R DK + Q E+ + + Q+ E DD
Sbjct: 896 PEKGISLRFPRFLRIRDDKKPEEATSAQQVAEMYRNQDQVKNQQSNEKSEPADD 949
>gi|159489817|ref|XP_001702891.1| DNA ligase [Chlamydomonas reinhardtii]
gi|158271019|gb|EDO96848.1| DNA ligase [Chlamydomonas reinhardtii]
Length = 813
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 196/410 (47%), Gaps = 50/410 (12%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHS 278
G V+P LA K E +E K+DG+R Q+H G +H FSR+ +++
Sbjct: 439 GVPVKPMLAKATNGVGEVLEKFTDIEFTVEYKYDGERAQVHVLDGGKTVHIFSRNAENNT 498
Query: 279 -EYGHAMSKIIEQNVL---VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR 334
+Y +S+I + +L VD + D E + +D + F Q ++ AR ++ D
Sbjct: 499 PKYPDIVSRI--KGLLKPEVDSIVFDAEAVAYDPEKKKILPF---QVLSTRARKDVAVDD 553
Query: 335 ---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
Q+ FAFD LY+ S++H+ L ER L + +G L L + +
Sbjct: 554 IKVQVVLFAFDCLYLNGQSLLHKPLTERRAALYGSLTEKEGEL--------LYASYK--- 602
Query: 392 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GS 450
+ +V+E+E F E++E EG+++K LG +EP RS WLKLK +Y+ G
Sbjct: 603 ------TSRDVEELESFLNESVEAGTEGLIVKTLGDTYEPSKRSSHWLKLKKDYMEGVGD 656
Query: 451 DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVT 510
DV+ +G ++G G+R G +L+A+ + PDT + IS ++GTG S+E+L +
Sbjct: 657 TFDVVPVGAFFGKGKRTGVFGAYLLAVYD---PDTETYQTIS--KLGTGFSEEQLSQLAE 711
Query: 511 KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESP----EKSIILSITSDIRTIRSEV 566
++P + P+ P +Y T + PDVW ++ K+ LSI+ + V
Sbjct: 712 AMRP----HTIPQ--PRHYY--TWDESLVPDVWFDAAVVWEVKAADLSISPRHKAALGLV 763
Query: 567 -FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGG 615
+ S+RFPR+ RVR DK D ++ + Q+ + G
Sbjct: 764 DPTKGISIRFPRLIRVRDDKSPEDATSAAQVADMFRNQAVIRQQKAQVSG 813
>gi|134080257|emb|CAK97160.1| unnamed protein product [Aspergillus niger]
Length = 884
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 147/570 (25%), Positives = 256/570 (44%), Gaps = 85/570 (14%)
Query: 103 GNFPMVAAEVLQRRQGMISGG-LTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNA 158
G+ +VAA+ + M LT++ +++ L +A + +KIS + L+ +A
Sbjct: 344 GDLGLVAAKSRSNQPTMFKPKPLTVRGVHEGLLGIAKVQGHGSQDKKISGIKKLLSAADA 403
Query: 159 QEM-KWIIMIILKDLKLGISEKSIF---------HEFH------PDAEDLFNVTCDLKLV 202
K+I+ + L+LG++EK++ HE P AE L LK V
Sbjct: 404 ATAAKYIVRFLEGKLRLGLAEKTVLVALAQAVVAHEAAMEGHKTPSAEKLAEGEAILKTV 463
Query: 203 CEKLK------------DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIE 250
+L + K ++ G ++P LA + GKE E
Sbjct: 464 YSELPAYEVIIPAILEHGLSNLPKVCKLQPGIPLKPMLAKPTKSITEVLDRFEGKEFTCE 523
Query: 251 CKFDGDRIQIHKNGSE--IHYFSRSFLDHSE-YGHAMSKI---IEQNVLVDRCILDGEML 304
K+DG+R QIH ++ FSR+ D S+ Y ++K+ I++ V +LD E +
Sbjct: 524 YKYDGERAQIHYKDAKGLSAIFSRNSEDLSKKYPDVLAKLDGWIKEGV--QSFVLDCETV 581
Query: 305 VWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVLYVGDTSVIHQSLKERHEL 362
WDT + F Q + + +D + D ++ C FAFD+L++ + +SL+ER EL
Sbjct: 582 AWDTENKKVLPF--QQLMTRKRKDVKAEDVKVKVCIFAFDLLFLNGEPTVKKSLRERREL 639
Query: 363 LQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVL 422
L + + ++G + +G N++V +DE++ ++++ EG+++
Sbjct: 640 LHESFQVTEGEFQ--FAQYG-NTNV--------------LDEIQTLLDDSVKASCEGLMV 682
Query: 423 KDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALA 478
K L S +EP RS WLK+K +Y+ G LD++++G Y+G G+R FL+A
Sbjct: 683 KMLDTEESGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVLGAYHGRGKRTSVYGAFLLA-- 740
Query: 479 ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKE 538
A ++ + + + C +GTG S+ L+ L P + PK FY +N K+
Sbjct: 741 ---AYNSSTQTYETICNIGTGFSEAVLEEFYNALSPL--TIDRPK----PFYSHSNVPKD 791
Query: 539 RPDVWIES----PEKSIILSITSDIRTIRSEVFSAP-----YSLRFPRIDRVRYDKPWHD 589
+PDVW E K+ L+++ + E SLRFPR + R DK
Sbjct: 792 QPDVWFEPRLVWEVKTADLTLSPRYKAAADEFMGTTGGGKGVSLRFPRFIKSRDDKKPEQ 851
Query: 590 CLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
++ E+ ++ GG+ DD
Sbjct: 852 ATTTRAVAEMYRKQEAVQKENAGKGGVDDD 881
>gi|405965797|gb|EKC31151.1| DNA ligase 1 [Crassostrea gigas]
Length = 905
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 186/404 (46%), Gaps = 63/404 (15%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDH- 277
G ++P LA +++ + E K+DG+R QIH +NG E+H +SR+ ++
Sbjct: 524 GVPLKPMLAHPTKGVSEVFKRFDEADFTCEYKYDGERAQIHILENG-EVHIYSRNSENNT 582
Query: 278 SEYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL 336
S+Y +++I + +N V C++D E + WD + F + D Q+
Sbjct: 583 SKYPDIIARIPKVRNDSVTSCVIDSEAVAWDAEKKQIQPFQVLSHRKRKDADASEIKIQV 642
Query: 337 CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
C +AFD+L++ S++ + ++R ELL K +G S
Sbjct: 643 CVYAFDLLFLNGKSLVKEPFRKRRELLHSSFKEVEGEFVF-----------------AKS 685
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDLD 453
+++ N DE+ +F E+++ EG+++K D+ + +E RS WLKLK +Y+ G LD
Sbjct: 686 MISSNTDEIAEFLDESVKGNCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLD 745
Query: 454 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL-------- 505
++++GG+ G+G+R G+ FL+ D F S C++GTG +D +L
Sbjct: 746 LVVMGGFLGTGKRTGKYGGFLLGCY-----DEENEEFQSICKIGTGFTDADLEKHATFFK 800
Query: 506 DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRT 561
D V K KPY+R +S PD W ++ + K LSI+
Sbjct: 801 DHVTEKPKPYYR----------------YDSSVEPDHWFDAVQVWEVKCADLSISP--TH 842
Query: 562 IRSEVFSAP---YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
+ + P SLRFPR R+R DK D EL S
Sbjct: 843 VAAAGIVDPEKGISLRFPRFLRIRDDKKAEDATSASQVAELYKS 886
>gi|288818769|ref|YP_003433117.1| DNA ligase [Hydrogenobacter thermophilus TK-6]
gi|384129518|ref|YP_005512131.1| ATP-dependent DNA ligase I [Hydrogenobacter thermophilus TK-6]
gi|288788169|dbj|BAI69916.1| DNA ligase [Hydrogenobacter thermophilus TK-6]
gi|308752355|gb|ADO45838.1| DNA ligase I, ATP-dependent Dnl1 [Hydrogenobacter thermophilus
TK-6]
Length = 572
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 130/492 (26%), Positives = 230/492 (46%), Gaps = 60/492 (12%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LT+ ++ D + +A++ +K+ + +L+K + E K+I II+ L+LG+ + ++
Sbjct: 105 LTVGQVYDEILDIATTRGTKDKVLRIMSLLKGLSNLEAKYITRIIVGRLRLGVGDATLIE 164
Query: 184 ---------EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ-DIEVGKAVRPQLAMRIG 233
E D E +N+ DL LV + L + R ++VG +R LA R+
Sbjct: 165 ALANLVGGKEHKTDIERAYNLCSDLGLVAKTLIQKGLEGIRSFKVQVGYPIRMALAERVT 224
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVL 293
+A R+L +E K+DG R+Q+HK ++ +SR+ ++ + I Q++
Sbjct: 225 NAEEIVRRLG--RCAVEAKYDGFRLQVHKKDKDVEIYSRNLERMTDMFPDVKSAILQHIK 282
Query: 294 VDRCILDGEMLVWDTSLNRFAEFG-SNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVI 352
+L+GE + ++ F F + Q K + + L FAFD+LY+
Sbjct: 283 FRELVLEGEAITYNEETGEFYPFQITIQRKRKYGVYEYAKEFPLKLFAFDLLYL------ 336
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
E + K + +LE ++P + L P + +V E+E+FF++
Sbjct: 337 -----EGEDFTSKPFIDRRRKLEEILPKNSLIL-------PSEMFITDSVKEIERFFEDA 384
Query: 413 IENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGG-EV 470
+ EGI+ K L + + G R+ W+KLK Y + +D +DV+I+G +YG G R +
Sbjct: 385 VARGLEGIMAKRLDAPYTAGSRNFNWIKLKRSYKGSLADTIDVVIVGYFYGKGSRAKLGI 444
Query: 471 AQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFY 530
L AL + PA DT F + +VG+G ++EE KLK + + P R
Sbjct: 445 GALLTALYD-PATDT----FKTVSKVGSGFTEEEW----IKLKEMLDEIKLPHR------ 489
Query: 531 QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-------PYSLRFPR-IDRVR 582
+S DVW+E ++++ +D RS + +A ++LRFPR + +R
Sbjct: 490 HARVDSLLEADVWVEP---KYVITVNAD-EITRSPLHTAGRTTEEPGFALRFPRAVGFIR 545
Query: 583 YDKPWHDCLDVQ 594
DK D V+
Sbjct: 546 SDKRAEDANTVE 557
>gi|195489363|ref|XP_002092706.1| GE14336 [Drosophila yakuba]
gi|194178807|gb|EDW92418.1| GE14336 [Drosophila yakuba]
Length = 747
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 196/416 (47%), Gaps = 57/416 (13%)
Query: 208 DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKN-GSE 266
D + +R + G +RP LA H + + G ++ E K+DG+R QIH+N E
Sbjct: 351 DIKELQERCPMHPGMPLRPMLAQPTKGVHEVFERFGGMQITCEWKYDGERAQIHRNEKGE 410
Query: 267 IHYFSRSFLDHS-EYGHAMSKIIEQNVL---VDRCILDGEMLVWDTSLNRFAEFGSNQEI 322
I FSR+ +++ +Y +++ +L + I+D E++ WD + F Q +
Sbjct: 411 ISIFSRNSENNTAKYPDLIAR--SAGLLKGDIKSYIIDSEIVAWDVERKQILPF---QVL 465
Query: 323 AKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVP 379
+ R + + Q+C + FD+LY+ T+++ ++L ER +LL + + +G +
Sbjct: 466 STRKRKNVDIEEIKVQVCVYIFDLLYINGTALVTKNLSERRKLLLEHFQEVEGEWKFAT- 524
Query: 380 DHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGK 437
+L +++DEV++F +E+I+ EG+++K L + +E RS
Sbjct: 525 ----------------ALDTNDIDEVQQFLEESIKGNCEGLMVKTLDEEATYEIAKRSRN 568
Query: 438 WLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRV 496
WLKLK +Y+ G LD+++IGGY G GRR G FL+A DT + S C++
Sbjct: 569 WLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGTYGGFLLACY-----DTENEEYQSICKI 623
Query: 497 GTGLSDEELDA--------VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE 548
GTG +DE+L V + K Y+R Y+ P P +++ + + SP
Sbjct: 624 GTGFTDEDLQTHSEFLGKHVTSTAKSYYR-YD-PSLEPDHWFEPVQVWEVKCADLSLSPI 681
Query: 549 KSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSN 604
+ I R I SLRFPR R+R DK + D + S +
Sbjct: 682 HRAAIGIVDGERGI---------SLRFPRFIRIRDDKNSENATDANQVAHMYQSQD 728
>gi|242776785|ref|XP_002478901.1| DNA ligase Cdc9, putative [Talaromyces stipitatus ATCC 10500]
gi|218722520|gb|EED21938.1| DNA ligase Cdc9, putative [Talaromyces stipitatus ATCC 10500]
Length = 860
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 133/529 (25%), Positives = 226/529 (42%), Gaps = 95/529 (17%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEF------HPDAEDLFNVTCDL 199
K E K++I + L+LG++EK++ HE P AE L L
Sbjct: 360 KGGPSEAKFLIRFLEGKLRLGLAEKTVLVALAQAVVTHEAALKGEKSPSAERLAQGESVL 419
Query: 200 KLVCEKLKDRN------------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEV 247
K V +L K ++ G ++P LA + GKE
Sbjct: 420 KQVYSELPAYEVIIPAMLKEGIFNLPKVCKLQPGVPLKPMLAKPTKSITEVLDRFEGKEF 479
Query: 248 VIECKFDGDRIQIHK-NGSEIHYFSRSFLDHSEYGHAMSKIIEQN----------VL--- 293
E K+DG+R QIH + IH + + + +S I +N +L
Sbjct: 480 TCEYKYDGERAQIHYVSPDSIHQYPNATATLQKDAKGLSSIFSRNSEDLSKKYPDILAKL 539
Query: 294 -------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVL 344
V +LD E + WD + + F Q + + +D + D ++ C FAFD+L
Sbjct: 540 DTWIKPGVTSFVLDCETVAWDMANKKVLPF--QQLMTRKRKDVKAEDVKVKVCVFAFDLL 597
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
++ + +SL+ER +LL + P++G + H + +DE
Sbjct: 598 FLNGEPTVKKSLRERRQLLHESFHPTEG-------EFAFAEHSN----------TNELDE 640
Query: 405 VEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 460
++ +E++++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G Y
Sbjct: 641 IQSLLEESVKSSCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLSGLGDSLDLVVLGAY 700
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
+G G+R FL+A A ++ + F + C +GTG S+ L+ + +L P +
Sbjct: 701 FGRGKRTSVYGAFLLA-----AYNSSKQTFETICNIGTGFSEALLEELHKELSPL--AID 753
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSAP----- 570
PK FY+ + KE+PDVW E P K+ L+++ + EV
Sbjct: 754 RPK----PFYEHSTVPKEQPDVWFE-PRLVWEIKAADLTLSPRYKAASDEVVGTSGAGKG 808
Query: 571 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
SLRFPR + R DK ++ ++ ++ GG+ DD
Sbjct: 809 ISLRFPRYIKARDDKKPEQATTTRAVADMYRRQEAVVKESAGKGGVDDD 857
>gi|146416351|ref|XP_001484145.1| hypothetical protein PGUG_03526 [Meyerozyma guilliermondii ATCC
6260]
gi|146391270|gb|EDK39428.1| hypothetical protein PGUG_03526 [Meyerozyma guilliermondii ATCC
6260]
Length = 731
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 132/514 (25%), Positives = 238/514 (46%), Gaps = 82/514 (15%)
Query: 135 RLASSENRAEKISVLSTLIKKTN--AQEMKWIIMIILKDLKLGISEKSIF---------H 183
+ + +++ +KI +++ ++ + + E K++I + L++G++EK++ H
Sbjct: 243 KFSGKDSQGKKIGMINKMLTACDLKSNEAKFLIRSLEGKLRIGLAEKTVLIALAQAFVNH 302
Query: 184 EF-------HPD----AEDL----FNVTCDLKLVCEKLKDRNQRHKRQDIEV--GKAVRP 226
E +P+ AED+ F+ T + +++ +K + + + ++ G ++P
Sbjct: 303 ELSSSGKKINPEKLTSAEDIVREAFSRTPNYEVLIKKAAEFGVFNLLEHCKLTPGIPLKP 362
Query: 227 QLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHSE-YGHAM 284
LA + G++ E K+DG+R Q+H E+ +SR+ D S+ Y +
Sbjct: 363 MLAKPTKSISEVLDRFQGEDFTCEYKYDGERAQVHLLETGEVRIYSRNSEDMSQRYPDLI 422
Query: 285 S------KIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCY 338
S K + + +LD E + WD N+ F + D +C
Sbjct: 423 SILKDFVKTQAEETKITSMVLDCEAVAWDRVNNKILPFQVLSTRKRKDVDEKDIKVHICL 482
Query: 339 FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLV 398
FAFD+LY +I +SL +R E++ K + +G+ + +
Sbjct: 483 FAFDLLYYNGEPLITKSLADRREIMHKHIDTIEGKFQFATAKN----------------- 525
Query: 399 AHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDV 454
+ N+DE++ F +++++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 526 SSNLDELQAFLDQSVKDACEGLMVKMLHGPDSYYEPSKRSRNWLKLKKDYLAGVGDSLDL 585
Query: 455 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 514
++IG Y G G+R G FL+A + DT + + C++GTG S+++L + KL P
Sbjct: 586 VVIGAYIGRGKRTGGYGGFLLASYNQ---DT--GEYETTCKIGTGFSEQDLADLHAKLSP 640
Query: 515 YFRKYEYPKRAPPSFYQV-TNNSKERPDVWIESPEKSIILSI-TSDIRTIRSEVFSAPY- 571
K P S+Y T NS PDVW E +++ + T+D+ S ++ A +
Sbjct: 641 TEIK------QPKSYYVYDTTNSNAVPDVWFEP---TLVFEVLTADLSL--SPIYKAAHH 689
Query: 572 ------SLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
SLRFPR RVR DK D E
Sbjct: 690 EYGKGISLRFPRFLRVRDDKGIEDATSSTEVAEF 723
>gi|365981523|ref|XP_003667595.1| hypothetical protein NDAI_0A01940 [Naumovozyma dairenensis CBS 421]
gi|343766361|emb|CCD22352.1| hypothetical protein NDAI_0A01940 [Naumovozyma dairenensis CBS 421]
Length = 765
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 182/398 (45%), Gaps = 48/398 (12%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHS 278
G ++P LA + + G+ E K+DG+R Q+H ++G+ + +SR+ + +
Sbjct: 398 GIPLKPMLAKPTKAINEILDRFQGETFTSEYKYDGERAQVHLLEDGT-MRIYSRNGENMT 456
Query: 279 E-YGHA-MSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR-DGLSSDRQ 335
E Y + ++ ILD E + WD + F Q ++ R D L+ D +
Sbjct: 457 ERYPEIHIGDFVKDRNETKTLILDCEAVAWDKEQQKILPF---QVLSTRKRKDVLAKDVK 513
Query: 336 L--CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEP 393
+ C FAFD+L +I+ SLKER E+L +V P+ G +
Sbjct: 514 VRVCLFAFDILCHNSNKLINYSLKERREILHRVTTPAPGEFQYAT--------------- 558
Query: 394 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-G 449
L N+DE++KF +++ + EG+++K L S +EP RS WLKLK +Y+ G
Sbjct: 559 --ELTTSNLDELQKFLDQSVNDSCEGLMVKMLEGEESHYEPSKRSRNWLKLKKDYLEGIG 616
Query: 450 SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV 509
LD+ ++G YYG G+R G FL+ + F + C++GTG SDE L +
Sbjct: 617 DSLDLCVLGAYYGRGKRTGTYGGFLLGCYNDNTGE-----FETCCKIGTGFSDEMLQQLH 671
Query: 510 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEV 566
KLK P + Y +S PDVW E +L+ S I S
Sbjct: 672 EKLKATVID------GPKATY--IYDSSAEPDVWFEPSLLFEVLTADLSLSPIYKAGSSA 723
Query: 567 FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSN 604
+ SLRFPR R+R DK D + +EL + +
Sbjct: 724 YDKGVSLRFPRFIRIREDKGVEDATSSEQIIELYENQS 761
>gi|325557912|gb|ADZ29294.1| DNA ligase [Cowpox virus]
Length = 552
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 142/584 (24%), Positives = 255/584 (43%), Gaps = 54/584 (9%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKLYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT++E++ L L+S +
Sbjct: 73 EDMLQDLGY--GYIGDTISTFFKENTEIRPRDKSI----LTLEEVDSFLTTLSSVTKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+N I V + P LA + A++K + E K+DG+R+Q+HK
Sbjct: 187 NAAKQNL--DSISISVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKKN 243
Query: 265 SEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
+E +FSR+ L H + + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSH-KVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVPLPFGS--- 298
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
+ + +C F FD LY + L ER L+ V+ +P+
Sbjct: 299 -LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYERRSFLKDVM--------VEIPNR 349
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+
Sbjct: 350 IVFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKI 398
Query: 442 KPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K +Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +
Sbjct: 399 KRDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---S 452
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G D L + +L + + PK+ P + N PD +E P++S I I+
Sbjct: 453 GHDDNTLRVLQDQL-TMVKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGA 508
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 509 EFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|410075868|ref|XP_003955516.1| hypothetical protein KAFR_0B00830 [Kazachstania africana CBS 2517]
gi|372462099|emb|CCF56381.1| hypothetical protein KAFR_0B00830 [Kazachstania africana CBS 2517]
Length = 710
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 224/504 (44%), Gaps = 67/504 (13%)
Query: 132 LLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF--------- 182
L+ + + +++ +KI ++ L+ E K++I + L++G++EKS+
Sbjct: 229 LIAKSSGKDSQLKKIRLIKKLLTACKGIEAKYLIRSLESKLRIGLAEKSVLISLSKALLI 288
Query: 183 ----HEFHPDAE----------DLFNVTCDLKLV---CEKLKDRNQRHKRQDIEVGKAVR 225
+ PD E D F + ++V C K N + + G ++
Sbjct: 289 NEYNNTLDPDMELIEKAEQKIRDAFCQIPNYEIVINSCLKYGIMN-LDEHCSLRPGIPLK 347
Query: 226 PQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-KNGSEIHYFSRSFLDHSE-YGHA 283
P LA + + E K+DG+R Q+H N + +SR+ + +E Y
Sbjct: 348 PMLAKPTKTIMEVFDRFQNIHFTSEYKYDGERAQVHLMNDGSMRIYSRNGENMTERYPEI 407
Query: 284 -MSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFD 342
++ I+ L I+D E + WD + F + D ++C FAFD
Sbjct: 408 NVTDFIKDLNLTKSLIIDCEAVAWDREEKKILPFQVLSTRKRKDVDIKDIKVRICLFAFD 467
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
+L D +I++SL+ER E+L V + HG ++ + L +N+
Sbjct: 468 ILCHNDEKLINKSLRERREILHSVTREV----------HGEFTYAK-------ELSTNNL 510
Query: 403 DEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIG 458
DE++ F +++++ EG+++K L S +EP RS WLKLK +Y+ G LD+ ++G
Sbjct: 511 DELQLFLDQSVKDSCEGLMVKVLDGEDSHYEPSKRSRNWLKLKKDYLDGVGDSLDLCVLG 570
Query: 459 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 518
+YG G+R G FL+ + + F + C++GTG SDE L ++ +LK
Sbjct: 571 AFYGRGKRTGTYGGFLLGCYNQDTGE-----FETACKIGTGFSDEVLQSLYDRLK----- 620
Query: 519 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSAPYSLRF 575
P + Y +S +PDVW E +L+ S I + +S SLRF
Sbjct: 621 -STTIDGPKATY--IYDSSAQPDVWFEPTLLFEVLTADLSMSPIYKAGASTYSKGISLRF 677
Query: 576 PRIDRVRYDKPWHDCLDVQSFVEL 599
PR R+R DK + + +EL
Sbjct: 678 PRFIRLREDKSVEEATSSEQIIEL 701
>gi|439074|gb|AAA60905.1| homolog of vaccinia virus CDS A50R (DNA ligase); putative [Variola
major virus]
gi|94484625|gb|ABF23738.1| DNA ligase [Variola virus]
gi|94484823|gb|ABF23935.1| DNA ligase [Variola virus]
gi|94485021|gb|ABF24132.1| DNA ligase [Variola virus]
gi|109724409|gb|ABG43534.1| DNA ligase [Variola virus]
Length = 552
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 139/583 (23%), Positives = 254/583 (43%), Gaps = 52/583 (8%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKIYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT+++++ L L+S +
Sbjct: 73 KDMLQDLGY--GYIGDTISTFFKENTEIRPRNKSI----LTLEDVDSFLTTLSSITKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+ Q + V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 --NESKQNLNSISVSVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSFLDHSEY--GHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEI 322
+E +FSR+ Y + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSYKVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVQLPFGS---- 298
Query: 323 AKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
+ + +C F FD LY + L +R L+ V+ +P+
Sbjct: 299 LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYKRRSFLKDVM--------VEIPNRI 350
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLK 442
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+K
Sbjct: 351 VFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIK 399
Query: 443 PEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 499
+Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +G
Sbjct: 400 RDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SG 453
Query: 500 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI 559
D L + +L + + PK+ P + N PD +E P++S I I+
Sbjct: 454 HDDNTLRVLQDQL-TMVKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAE 509
Query: 560 RTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 510 FTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|290977272|ref|XP_002671362.1| predicted protein [Naegleria gruberi]
gi|284084930|gb|EFC38618.1| predicted protein [Naegleria gruberi]
Length = 846
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 151/596 (25%), Positives = 257/596 (43%), Gaps = 97/596 (16%)
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMIS-G 122
G+ ES++ L +A G + + + G+ +VA ++ M
Sbjct: 294 GVGESLIMKALAEATGKTLKKIKELSV----------KEGDLGLVANVARSTQKTMFKPK 343
Query: 123 GLTIKELNDLLDRLASSE------NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGI 176
LT+K + D +A++E + EKI +L L+ + + M +II + L++G+
Sbjct: 344 SLTLKSVYDSFKFIATTEGKKSMNTKVEKIKLL--LVSSVDVEPM-FIIRSLQGKLRIGL 400
Query: 177 SEKSIFHEFHP------------DAEDLFNVTCDLKLVCEKLKDRN------------QR 212
E+++ D DL LK V +L + +
Sbjct: 401 GEETVLIALSHAILLSRGGKKVLDEADLKFAKETLKSVYSELPSYDDIIPALLEHGFEKL 460
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H ++ G VRP LA + + KE E K+DG+R QIH I FS
Sbjct: 461 HDICHLKPGFPVRPMLAKSAKGVQELFDRFGEKEFTCEFKYDGERAQIHMLPDKSIKIFS 520
Query: 272 RSFLDHSEYGHAMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ +H+ + +++ Q V I+D E++ +D + F Q ++ R
Sbjct: 521 RNMENHTSKYPDLIQMLPQVTKEHVKSFIIDCEVVAFDPIEKKIKPF---QVLSTRGRKN 577
Query: 330 LSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSH 386
++ + Q+C FAFD+LY+ S + ++LKER +L S + SH
Sbjct: 578 ININDIKVQVCLFAFDILYINGESCLKKNLKERRGILHDSFATSDDKFM-------FASH 630
Query: 387 VRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPE 444
+++++++ F +++I+ EG+++K L + +EP RS WLKLK +
Sbjct: 631 RD----------TNDLNDIQVFLEDSIKGNCEGLMVKTLEVDATYEPSKRSFNWLKLKKD 680
Query: 445 YIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDE 503
YI G +D+++IGGY G G+R G FL+A + P D Y S C++GTG SDE
Sbjct: 681 YIEGLGDSVDLVVIGGYKGRGKRTGVYGGFLLACFD-PESDQYQ----SICKIGTGFSDE 735
Query: 504 ELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIR 563
L K+ E+ AP S++ + +RPDVW ++ +++ I + TI
Sbjct: 736 MLKECADKMN------EHIISAPKSYFSFRES--QRPDVWFDA---NVVWEIKAADLTIS 784
Query: 564 SEVFSA--------PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 611
+A +LRFPR R R DK + +L +S Q K
Sbjct: 785 PAHMAAIGLVDESKGIALRFPRFVRTREDKKPEQATSAEQIADLYNSQAVIAQNKK 840
>gi|94483809|gb|ABF22926.1| DNA ligase [Variola virus]
gi|94485826|gb|ABF24933.1| DNA ligase [Variola virus]
gi|94488055|gb|ABF27151.1| DNA ligase [Variola virus]
Length = 552
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 139/583 (23%), Positives = 254/583 (43%), Gaps = 52/583 (8%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKIYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT+++++ L L+S +
Sbjct: 73 KDMLQDLGY--GYIGDTISTFFKENTEIRPRNKSI----LTLEDVDSFLTTLSSITKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+ Q + V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 --NESKQNLDSISVSVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSFLDHSEY--GHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEI 322
+E +FSR+ Y + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSYKVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVQLPFGS---- 298
Query: 323 AKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
+ + +C F FD LY + L +R L+ V+ +P+
Sbjct: 299 LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYKRRSFLKDVM--------VEIPNRI 350
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLK 442
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+K
Sbjct: 351 VFSELTN---------ISNESQLTNVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIK 399
Query: 443 PEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 499
+Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +G
Sbjct: 400 RDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SG 453
Query: 500 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI 559
D L + +L + + PK+ P + N PD +E P++S I I+
Sbjct: 454 HDDNTLRVLQDQL-TMVKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAE 509
Query: 560 RTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 510 FTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|9627683|ref|NP_042206.1| hypothetical protein VARVgp162 [Variola virus]
gi|461948|sp|P33798.1|DNLI_VAR67 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|457053|emb|CAA49103.1| J4R [Variola virus]
gi|516403|emb|CAA47545.1| DNA ligase [Variola virus]
gi|94484013|gb|ABF23129.1| DNA ligase [Variola virus]
gi|94484216|gb|ABF23331.1| DNA ligase [Variola virus]
gi|94484423|gb|ABF23537.1| DNA ligase [Variola virus]
gi|94485219|gb|ABF24329.1| DNA ligase [Variola virus]
gi|94486030|gb|ABF25136.1| DNA ligase [Variola virus]
gi|94486231|gb|ABF25336.1| DNA ligase [Variola virus]
gi|94486434|gb|ABF25538.1| DNA ligase [Variola virus]
gi|94486637|gb|ABF25740.1| DNA ligase [Variola virus]
gi|94486839|gb|ABF25941.1| DNA ligase [Variola virus]
gi|94487244|gb|ABF26344.1| DNA ligase [Variola virus]
gi|94487650|gb|ABF26748.1| DNA ligase [Variola virus]
gi|94487851|gb|ABF26948.1| DNA ligase [Variola virus]
gi|94488258|gb|ABF27353.1| DNA ligase [Variola virus]
gi|94488458|gb|ABF27552.1| DNA ligase [Variola virus]
gi|94488658|gb|ABF27751.1| DNA ligase [Variola virus]
gi|94488859|gb|ABF27951.1| DNA ligase [Variola virus]
gi|94489059|gb|ABF28150.1| DNA ligase [Variola virus]
gi|94489259|gb|ABF28349.1| DNA ligase [Variola virus]
gi|94489460|gb|ABF28549.1| DNA ligase [Variola virus]
gi|94489662|gb|ABF28750.1| DNA ligase [Variola virus]
gi|94489861|gb|ABF28948.1| DNA ligase [Variola virus]
gi|94490067|gb|ABF29153.1| DNA ligase [Variola virus]
gi|94490270|gb|ABF29355.1| DNA ligase [Variola virus]
gi|109724205|gb|ABG43331.1| DNA ligase [Variola virus]
gi|109724612|gb|ABG43736.1| DNA ligase [Variola virus]
gi|109724816|gb|ABG43939.1| DNA ligase [Variola virus]
gi|109725019|gb|ABG44141.1| DNA ligase [Variola virus]
gi|109725224|gb|ABG44345.1| DNA ligase [Variola virus]
gi|109725429|gb|ABG44549.1| DNA ligase [Variola virus]
gi|109725631|gb|ABG44750.1| DNA ligase [Variola virus]
gi|109725835|gb|ABG44953.1| DNA ligase [Variola virus]
gi|109726038|gb|ABG45155.1| DNA ligase [Variola virus]
gi|109726242|gb|ABG45358.1| DNA ligase [Variola virus]
gi|109726444|gb|ABG45559.1| DNA ligase [Variola virus]
gi|109726648|gb|ABG45762.1| DNA ligase [Variola virus]
gi|745284|prf||2015436GH J4R gene
Length = 552
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 139/583 (23%), Positives = 254/583 (43%), Gaps = 52/583 (8%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKIYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT+++++ L L+S +
Sbjct: 73 KDMLQDLGY--GYIGDTISTFFKENTEIRPRNKSI----LTLEDVDSFLTTLSSITKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+ Q + V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 --NESKQNLDSISVSVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSFLDHSEY--GHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEI 322
+E +FSR+ Y + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSYKVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVQLPFGS---- 298
Query: 323 AKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
+ + +C F FD LY + L +R L+ V+ +P+
Sbjct: 299 LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYKRRSFLKDVM--------VEIPNRI 350
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLK 442
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+K
Sbjct: 351 VFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIK 399
Query: 443 PEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 499
+Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +G
Sbjct: 400 RDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SG 453
Query: 500 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI 559
D L + +L + + PK+ P + N PD +E P++S I I+
Sbjct: 454 HDDNTLRVLQDQL-TMVKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAE 509
Query: 560 RTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 510 FTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|94487042|gb|ABF26143.1| DNA ligase [Variola virus]
Length = 552
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 139/583 (23%), Positives = 254/583 (43%), Gaps = 52/583 (8%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKIYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT+++++ L L+S +
Sbjct: 73 KDMLQDLGY--GYIGDTISTFFKENTEIRPRNKSI----LTLEDVDSFLTTLSSITKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKKIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+ Q + V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 --NESKQNLDSISVSVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSFLDHSEY--GHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEI 322
+E +FSR+ Y + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSYKVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVQLPFGS---- 298
Query: 323 AKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
+ + +C F FD LY + L +R L+ V+ +P+
Sbjct: 299 LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYKRRSFLKDVM--------VEIPNRI 350
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLK 442
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+K
Sbjct: 351 VFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIK 399
Query: 443 PEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 499
+Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +G
Sbjct: 400 RDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SG 453
Query: 500 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI 559
D L + +L + + PK+ P + N PD +E P++S I I+
Sbjct: 454 HDDNTLRVLQDQL-TMVKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAE 509
Query: 560 RTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 510 FTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|195391356|ref|XP_002054326.1| GJ24382 [Drosophila virilis]
gi|194152412|gb|EDW67846.1| GJ24382 [Drosophila virilis]
Length = 818
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 131/509 (25%), Positives = 224/509 (44%), Gaps = 70/509 (13%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
L + E+ ++L +L E+ VL + K+ +++ I +I +DL++ + I
Sbjct: 143 LYLHEVENMLCQLEQRTKEDEQTEVLQEVCKQATDLDLRTFIRLIKQDLRINARARHILD 202
Query: 184 EFHPDAEDLFNVTCDLKLVCE----------------KLKDRNQRHKRQDIEVGKAVRPQ 227
F P+A + T DLKL+ E K ++ + I+V + P
Sbjct: 203 AFGPEAYPAYQSTRDLKLIVENFAGTQGKPKSLKGLPKAATKSSKKAIGAIQVMTPISPM 262
Query: 228 LAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAM 284
LA A++K G + E K+DG+R+QIHK+GSE +FSR+ +DH
Sbjct: 263 LANACKSVEEAFKKNPGG-LYSEVKYDGERVQIHKHGSEFKFFSRNLKPVVDH------- 314
Query: 285 SKIIEQNVLVDRC-------ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLC 337
KI E + R ILD E+++ +T FG+ A + ++ +C
Sbjct: 315 -KIKELKDYIPRAFPGANDMILDSEIILVNTKTGELLPFGT----LGAHKKHTYANASVC 369
Query: 338 YFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSL 397
F FD L + S +R E+L++ +KP K ++ S
Sbjct: 370 LFVFDCLLYDGDDLTQLSFCKRREILEQNIKPIKHHVQL-----------------SESQ 412
Query: 398 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDV 454
+E+ + ++ EG+VLK ++PG R+ WLK+K +Y+ G D+
Sbjct: 413 FLKTKNELAMMTAKVLQANLEGVVLKSPEGTYQPGKRN--WLKVKKDYLFGGKMADTADL 470
Query: 455 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 514
+++G +YGSG++GG ++ FL+ D R + + +V +GL D D V L
Sbjct: 471 VVLGAWYGSGKKGGVLSIFLMGCY-----DARDRLWKTVTKVHSGLDDASNDEVHESLMK 525
Query: 515 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLR 574
+ + K P++ + PDV + PE+ + IT T +A S+R
Sbjct: 526 LTERADASK--IPNW--LLCKKALIPDVLAKIPEQMPVWEITGAEFTQSEAHTAAGISIR 581
Query: 575 FPRIDRVRYDKPWHDCLDVQSFVELVHSS 603
FPRI R+R DK D++ +L +S
Sbjct: 582 FPRITRLRSDKSAMQANDLEHLEQLYAAS 610
>gi|94487447|gb|ABF26546.1| DNA ligase [Variola virus]
Length = 552
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 139/583 (23%), Positives = 254/583 (43%), Gaps = 52/583 (8%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKIYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT+++++ L L+S +
Sbjct: 73 KDMLQDLGY--GYIGDTISTFFKENTEIRPRNKSI----LTLEDVDSFLTTLSSITKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDIASVCTCNDLKCVVMLINKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+ Q + V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 --NESKQNLDSISVSVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSFLDHSEY--GHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEI 322
+E +FSR+ Y + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSYKVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVQLPFGS---- 298
Query: 323 AKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
+ + +C F FD LY + L +R L+ V+ +P+
Sbjct: 299 LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYKRRSFLKDVM--------VEIPNRI 350
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLK 442
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+K
Sbjct: 351 VFSELTN---------ISNESQLTDVLDDVLTRKLEGLVLKDINGVYEPGKR--RWLKIK 399
Query: 443 PEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 499
+Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +G
Sbjct: 400 RDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SG 453
Query: 500 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI 559
D L + +L + + PK+ P + N PD +E P++S I I+
Sbjct: 454 HDDNTLRVLQDQL-TMVKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAE 509
Query: 560 RTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 510 FTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|195431541|ref|XP_002063795.1| GK15713 [Drosophila willistoni]
gi|194159880|gb|EDW74781.1| GK15713 [Drosophila willistoni]
Length = 744
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 190/422 (45%), Gaps = 69/422 (16%)
Query: 208 DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKN-GSE 266
D + R + G +RP LA H + G + E K+DG+R QIH N E
Sbjct: 348 DIKELSTRCPMHPGMPLRPMLAQPTKGVHEVLERFGGMHITCEWKYDGERAQIHCNEQGE 407
Query: 267 IHYFSRSFLDHS-EYGHAMSKIIEQNVL---VDRCILDGEMLVWDTSLNRFAEFGSNQEI 322
I FSR+ +++ +Y +++ +N + V+ I+D E++ WD + F Q +
Sbjct: 408 ISIFSRNSENNTAKYPDLIAR--SKNFIKKPVETYIIDSEIVAWDVERKQILPF---QVL 462
Query: 323 AKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVP 379
+ R + D Q+C + FD+LY+ +++ + L ER +LL + + +G +
Sbjct: 463 STRKRKNVDIDEIKVQVCVYIFDLLYINGMALVTKPLSERRKLLLEHFQEVEGEWKFAT- 521
Query: 380 DHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGK 437
+L +++DEV++F +E+++ EG+++K L + +E RS
Sbjct: 522 ----------------ALNTNDMDEVQQFLEESVKGNCEGLMVKTLDEEATYEIAKRSRN 565
Query: 438 WLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRV 496
WLKLK +Y+ G LD++++GGY G GRR G FL+A D + S C++
Sbjct: 566 WLKLKKDYLSNVGDSLDLVVLGGYRGKGRRTGTFGGFLLACY-----DAENEEYQSICKI 620
Query: 497 GTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE----------- 545
GTG +DE+L L P S+Y+ +S PD W E
Sbjct: 621 GTGFTDEDLKVHSESLGKSVIS------GPKSYYRY--DSSLEPDAWFEPVQVWEVKCAD 672
Query: 546 ---SPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
SP + I + R I SLRFPR R+R DK + D Q + S
Sbjct: 673 LSLSPIHRAAIGIVDNERGI---------SLRFPRFIRIRDDKSSENATDAQQVANMYQS 723
Query: 603 SN 604
+
Sbjct: 724 QD 725
>gi|50307281|ref|XP_453619.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642753|emb|CAH00715.1| KLLA0D12496p [Kluyveromyces lactis]
Length = 700
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 133/520 (25%), Positives = 233/520 (44%), Gaps = 75/520 (14%)
Query: 124 LTIKELNDLLDRLASS---ENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ E+ + L +A S ++++ K S++ ++ E K++I + L++G++EK+
Sbjct: 210 LTVGEVFNNLVSIAKSNGKDSQSRKGSLIKKMLTACKGYEAKFLIRSLESKLRIGLAEKT 269
Query: 181 IF---------HEFH---PDAE----------DLFNVTCDLKLVCEKLKDRNQRHKRQDI 218
+ HE + P E D F + +++ + Q I
Sbjct: 270 VLISVSKAILTHEHNGQEPSTEMVEQAESLIRDAFCQVPNYEMIINVALQYGIMNLNQHI 329
Query: 219 EV--GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSF 274
++ G ++P LA + G + E K+DG+R Q+H ++GS + +SR+
Sbjct: 330 KLRPGIPLQPMLAKPTKSISEVLDRFQGTKFTCEYKYDGERAQVHLCRDGS-MKIYSRNG 388
Query: 275 LDHSE-YGHAMSKIIEQNVLVDRC-ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS- 331
D +E Y K +++ + I+D E + WD + F Q ++ R G+
Sbjct: 389 EDMTERYPEIDVKHYVKDLGATKSFIVDSEAVAWDQEQGKILPF---QVLSTRKRKGVEL 445
Query: 332 --SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
++C +AFD+L + D +I++S ER ++L ++G+ +
Sbjct: 446 KDVKVRVCLYAFDILCLNDEPLINKSFHERRQILLDTFNGTQGQFDF------------- 492
Query: 390 QGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYI 446
L N DE++K+ +++++ EG+++K L S +EP RS WLKLK +Y+
Sbjct: 493 ----ANELTTTNFDELQKYLDQSVKDSCEGLMVKMLEGEESHYEPSKRSRNWLKLKKDYL 548
Query: 447 RA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL 505
G LD++++G YYG G+R G FL+ + + F + C++GTG SDE L
Sbjct: 549 EGVGDSLDLVVLGAYYGRGKRTGTYGGFLLGCYNLDSEE-----FETCCKIGTGFSDEML 603
Query: 506 DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRS- 564
+ TKLK E+P V +S DVW E +L+ + +
Sbjct: 604 QDLYTKLKD--TTVEHPST------NVIYDSSAPADVWFEPSMLFEVLTADLSLSPVYKA 655
Query: 565 --EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
E F SLRFPR R+R DK D +E S
Sbjct: 656 GFEAFGKGISLRFPRFVRIRDDKNVTDATSSDQVIEFYES 695
>gi|259479746|tpe|CBF70249.1| TPA: DNA ligase (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 932
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 135/530 (25%), Positives = 234/530 (44%), Gaps = 97/530 (18%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH------PDAEDLFNVTCDL 199
K E K+I+ + L+LG++EK++ HE P AE+L L
Sbjct: 432 KGGPSEAKYIVRFLEGKLRLGLAEKTVLVALAQAVVSHEAALKGKKAPSAEELAEGEAIL 491
Query: 200 KLVCEKLK----------DRNQRHKRQ--DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEV 247
K V +L + + R+ ++ G ++P LA + GK+
Sbjct: 492 KTVYSELPAYEVIIPALLEHGLSNLREHCKLQPGIPIKPMLAKPTKSITEVLDRFEGKDF 551
Query: 248 VIECKFDGDRIQIH-------KN--GSEIHY---------FSRSFLDHSE-YGHAMSKI- 287
E K+DG+R QIH KN G+++ FSR+ D S+ Y ++K+
Sbjct: 552 TCEYKYDGERAQIHYVAPDETKNYPGAQLTLKESAGLSAIFSRNSEDLSKKYPDVLAKLS 611
Query: 288 --IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDV 343
I+ V +LD E + WD + F Q + + +D + D ++ C FAFD+
Sbjct: 612 TWIKPGV--KSFVLDCETVAWDVEAKKVLPF--QQLMTRKRKDVKAEDVKVKVCVFAFDL 667
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
L++ + + L++R +LL +P +G + +G ++++
Sbjct: 668 LFLNGEPTVKKPLRQRRDLLHSSFQPIEGEFQ--FAQYG---------------NTNDLE 710
Query: 404 EVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGG 459
+++ ++++ EG+++K L S +EP RS WLK+K +Y+ G LD+L++G
Sbjct: 711 QIQTLLDDSVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGVGDSLDLLVLGA 770
Query: 460 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
YYG G+R FL+A A ++ + + + C +GTG S+ LD + T L P
Sbjct: 771 YYGRGKRTSVYGAFLLA-----AYNSNSQTYETICNIGTGFSEAMLDELHTTLSPLV--I 823
Query: 520 EYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP----- 570
+ PK FY + K++PDVW+E K+ L+++ + E
Sbjct: 824 DRPK----PFYSHSTVPKDQPDVWLEPRYVWEVKTADLTLSPRYKAAADEFVGTTGGGGK 879
Query: 571 -YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
SLRFPR +VR DK ++ E+ ++G GG+ DD
Sbjct: 880 GVSLRFPRFIKVRDDKKPEQATTTRAVAEMYRKQEAVAKEGSGKGGVDDD 929
>gi|194885762|ref|XP_001976489.1| GG22898 [Drosophila erecta]
gi|190659676|gb|EDV56889.1| GG22898 [Drosophila erecta]
Length = 747
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 199/427 (46%), Gaps = 67/427 (15%)
Query: 199 LKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRI 258
LK ++L+DR H G +RP LA H + + G ++ E K+DG+R
Sbjct: 348 LKYDIKELQDRCPMHP------GMPLRPMLAQPTKGVHEVFERFGGMQITCEWKYDGERA 401
Query: 259 QIHKN-GSEIHYFSRSFLDHS-EYGHAMSKIIEQNVL---VDRCILDGEMLVWDTSLNRF 313
QIH+N EI FSR+ +++ +Y +++ +L V I+D E++ WD +
Sbjct: 402 QIHRNEKGEISIFSRNSENNTAKYPDLIAR--STGLLKGDVQSYIIDSEIVAWDVERKQI 459
Query: 314 AEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPS 370
F Q ++ R + + Q+C + FD+LY+ T+++ ++L ER +LL + +
Sbjct: 460 LPF---QVLSTRKRKNVDIEEIKVQVCVYIFDLLYINGTALVTKNLSERRKLLLEHFQEV 516
Query: 371 KGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SK 428
+G + +L +++DEV++F +E+I+ EG+++K L +
Sbjct: 517 EGEWKFAT-----------------ALDTNDIDEVQQFLEESIKGNCEGLMVKTLDEEAT 559
Query: 429 WEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYP 487
+E RS WLKLK +Y+ G LD+++IGGY G GRR G FL+A DT
Sbjct: 560 YEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGTYGGFLLACY-----DTEN 614
Query: 488 RRFISFCRVGTGLSDEELDA--------VVTKLKPYFRKYEYPKRAPPS--FYQVTNNSK 537
+ S C++GTG +DE+L V K Y+R Y + P F V
Sbjct: 615 EEYQSICKIGTGFTDEDLQTHSEFLGKHVTDTAKSYYR---YDQSLEPDHWFEPVQVWEV 671
Query: 538 ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFV 597
+ D+ + SP + I R I SLRFPR R+R DK + D
Sbjct: 672 KCADLSL-SPIHRAAIGIVDGERGI---------SLRFPRFIRIRDDKNSENATDANQVA 721
Query: 598 ELVHSSN 604
+ S +
Sbjct: 722 HMYQSQD 728
>gi|375083079|ref|ZP_09730114.1| ATP-dependent DNA ligase [Thermococcus litoralis DSM 5473]
gi|374742236|gb|EHR78639.1| ATP-dependent DNA ligase [Thermococcus litoralis DSM 5473]
Length = 560
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 142/550 (25%), Positives = 251/550 (45%), Gaps = 74/550 (13%)
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQ--GMIS 121
G+ E +L + A G++ D + + + G+ A LQRR+ S
Sbjct: 60 GVGEKLLIRAVSMATGINSDEIE----------NSVKDTGDLGESVALALQRRKQKSFFS 109
Query: 122 GGLTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE 178
LTIK + L ++A + K+ L+ L + +E K++ IL ++ G++E
Sbjct: 110 QPLTIKRVYSTLVKVAETTGEGSQDRKLKYLANLFMDASPEEGKYLARTILGTMRTGVAE 169
Query: 179 ----KSIFHEFHPDAEDL---FNVTCDLKLVCEKLK-DRNQRHKRQDIEVGKAVRPQLAM 230
+I F E + + +T D V + K + ++ + I+VGK ++P LA
Sbjct: 170 GLLRDAIAEAFRVKVELVERAYMLTSDFGFVAKVAKLEGDEGLLKVKIQVGKPIKPMLAQ 229
Query: 231 RIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQ 290
+ + A ++ G E E K+DG R+Q+HK+G ++ +SR + + + + I++
Sbjct: 230 MVANVREALIEMGG-EAEFEIKYDGARVQVHKDGEKVIVYSRRLENVTRSIPEVVERIKE 288
Query: 291 NVLVDRCILDGEML-VWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDT 349
++ ++ I++GE++ V + R ++ + K D + L FDVLYV
Sbjct: 289 SLKPEKVIVEGELVAVGEEGRPRPFQYVLRRFRRKYNIDEMIEKIPLELNLFDVLYVDGK 348
Query: 350 SVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFF 409
S+I ER + L+ +V N ++ +L+ N +E E+F+
Sbjct: 349 SMIDVQFIERRKTLEGIVTT--------------NEWIKI----AENLITKNPEEAEEFY 390
Query: 410 KETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGE 469
++ EG++ K L S +E G+R KWLK+KP +LD++IIG +G GRR G
Sbjct: 391 HRALDLGHEGLMAKRLDSVYELGNRGKKWLKIKPTM----ENLDLVIIGAEWGEGRRSGV 446
Query: 470 VAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSF 529
++ FL+ A D F+ +VG+G +DE+L LKP +K E+ K F
Sbjct: 447 LSSFLLG-----AYDPIRGDFVPVGKVGSGFTDEDLIEFTKMLKPLIKK-EHGK-----F 495
Query: 530 YQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHD 589
++ P + IE + I +S + + ++LRFPR +R DK D
Sbjct: 496 VEI------EPKIVIEVAYQEI----------QKSPKYESGFALRFPRYVALREDKGPED 539
Query: 590 CLDVQSFVEL 599
+Q EL
Sbjct: 540 ADTLQRIAEL 549
>gi|21492584|ref|NP_659704.1| DNA ligase [Sheeppox virus]
Length = 557
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 221/484 (45%), Gaps = 50/484 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
L + +++ L+ L + N +K L+ + A ++K I+ I DL++ K + +
Sbjct: 109 LLLNDVDMFLNHLTTLTNEKDKQMFLTMISSICTADDLKCFILFIKNDLQIKAGVKCVLN 168
Query: 184 EFHPDAEDLFNVTCDLK--LVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRK 241
A + F + DLK + C L N ++ + V+P LA ++ A++K
Sbjct: 169 ALDKHAYNHFKNSIDLKKIVFCTSLNKLND----DNMVLFTPVKPMLANVCKSSYYAFKK 224
Query: 242 LHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCI 298
+ + E K+DG+RIQIHK+ + YFSR+ L H G + + I
Sbjct: 225 -YKDGICAEIKYDGERIQIHKDNNLYKYFSRNLKPVLFHKIEGFD-EFLTSAFPSANNFI 282
Query: 299 LDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKE 358
LD E+++ D + NRF FGS + L + C F FD L+ + S++
Sbjct: 283 LDAELILIDLNTNRFVPFGS----LGINKKKLFKNSSTCLFVFDCLFYNNVSLMSLPFVN 338
Query: 359 RHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDE 418
R +++ + K ++ +V + + + +++ K + I+ + E
Sbjct: 339 RRKIIVDNINEIKNKV--MVSE---------------AFYVYKENDLNKIMDDVIKKKLE 381
Query: 419 GIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLV 475
G++LK + + PG R WLK+K +Y+ GS D++++G YYG G +GG + FL+
Sbjct: 382 GLILKGININYVPGKRG--WLKMKKDYLDDGSMADSADLVVLGSYYGKGSKGGTPSIFLM 439
Query: 476 ALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNN 535
+ + + + ++ C +G +D+ L V ++K F K + P + V N
Sbjct: 440 GCYDNESNN---WKTVTKC---SGHNDDTLKKVQKEIK--FLKISKDTKKIPKWLIV--N 489
Query: 536 SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQS 595
PD + P+KS + I+ T + S+RFPR ++RYDK W L S
Sbjct: 490 KIYYPDFVVCDPKKSQVWEISGSSFTKSIHHTADGISIRFPRFKKIRYDKNW---LSATS 546
Query: 596 FVEL 599
F EL
Sbjct: 547 FNEL 550
>gi|260947188|ref|XP_002617891.1| hypothetical protein CLUG_01350 [Clavispora lusitaniae ATCC 42720]
gi|238847763|gb|EEQ37227.1| hypothetical protein CLUG_01350 [Clavispora lusitaniae ATCC 42720]
Length = 780
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 145/553 (26%), Positives = 245/553 (44%), Gaps = 88/553 (15%)
Query: 102 AGNFPMVAAEVLQRRQGMISGG-LTIKELNDLLDRLASS---ENRAEKISVLSTLIKKTN 157
AG+ +VA + + M L + + + L ++A S +++ KI +++ ++ N
Sbjct: 253 AGDLGLVAQKSRSGQPTMFKPAPLDVDTVFENLTKIAKSTGKDSQTRKIGIINKMLTACN 312
Query: 158 --AQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKD------- 208
+ E K++I + L++G++EK++ + N T K+ E+L
Sbjct: 313 MKSSEAKFLIRSLEGKLRIGLAEKTVLIALAQAFLNFENKTSK-KISPEQLTKAENVIRE 371
Query: 209 ------------RNQRHKRQDIEV--------GKAVRPQLAMRIGDAHAAWRKLHGKEVV 248
RN HK + + G ++P LA + G+E
Sbjct: 372 AFSLIPNYEIIIRNA-HKYGILNLLEHCQLTPGVPLKPMLAKPTKSIGEILDRFQGEEFT 430
Query: 249 IECKFDGDRIQIH--KNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVD----------R 296
E K+DG+R Q+H +GS + +SR+ D SE + I++ + V
Sbjct: 431 CEYKYDGERAQVHLLADGS-VRVYSRNSEDMSERYPDLLSIVKDFIKVTTNSEEKESPKS 489
Query: 297 CILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIH 353
ILD E + WD + F Q ++ R ++ +C FAFD+LY + S+I
Sbjct: 490 MILDCEAVAWDREKQKILPF---QVLSTRKRKDVNESDIKVHICLFAFDLLYYNNESLIT 546
Query: 354 QSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETI 413
+SL+ER L + K +G+ + + + ++DE++ F +++
Sbjct: 547 KSLEERRSCLFENFKTIEGKFQYATYKN-----------------SSDLDELQAFLDQSV 589
Query: 414 ENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGE 469
++ EG+++K L S +EP RS WLKLK +Y+ G LD++++G Y G G+R G
Sbjct: 590 KDSCEGLMVKMLHGPESFYEPSKRSRNWLKLKKDYLAGVGDSLDLVVVGAYVGKGKRTGS 649
Query: 470 VAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSF 529
FL+A DT + + C++GTG SDE+L ++ KLKP + PK P +
Sbjct: 650 YGGFLLATYND---DT--GEYETTCKIGTGFSDEDLASLYAKLKP--TEISRPK---PFY 699
Query: 530 YQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
T NS PDVW+E +L+ S I + + SLRFPR R R DK
Sbjct: 700 VYDTKNSNAVPDVWLEPTLLFEVLTADLSLSPIYKASHQEYGKGISLRFPRFIRTREDKG 759
Query: 587 WHDCLDVQSFVEL 599
D E
Sbjct: 760 VEDATTSSQIAEF 772
>gi|367011607|ref|XP_003680304.1| hypothetical protein TDEL_0C02040 [Torulaspora delbrueckii]
gi|359747963|emb|CCE91093.1| hypothetical protein TDEL_0C02040 [Torulaspora delbrueckii]
Length = 705
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 134/515 (26%), Positives = 225/515 (43%), Gaps = 70/515 (13%)
Query: 124 LTIKELNDLLDRLASSENR---AEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ E+ + L +A S+ + KI ++ ++ E K++I + L++G++EK+
Sbjct: 214 LTVGEVFENLRAIAHSQGKDSQTRKIKLIKRMLTACEGVEAKFLIRSLESKLRIGLAEKT 273
Query: 181 IF-------------------HEFHPDAE----DLFNVTCDLKLVCEKLKDRN--QRHKR 215
+ E AE D F + ++V D + K
Sbjct: 274 VLISLSKALLTNEGETGKEPSMELVEQAEAKIRDAFCQVPNYEIVINACLDYGIMELDKH 333
Query: 216 QDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRS 273
+ G ++P LA + G+ E K+DG+R Q+H ++G+ + +SR+
Sbjct: 334 CRLRPGIPLKPMLAKPTKSITEVLDRFQGQTFTSEYKYDGERAQVHLLEDGT-MRIYSRN 392
Query: 274 FLDHSEYGHAMS--KIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS 331
+ +E +S + ILD E + WD + F + +
Sbjct: 393 GENMTERYPEISIRDFVADLEHTKTLILDCEAVAWDKVQQKILPFQVLSTRKRKDVEAKD 452
Query: 332 SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
++C FAFD++ I++SL+ER ELL +V KP G + V
Sbjct: 453 VKVRVCLFAFDIICHNGERQINKSLRERRELLAQVTKPVAGEFQYAV------------- 499
Query: 392 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA 448
L +V+E++KF +++++ EG+++K L S +EP RS WLKLK +Y+
Sbjct: 500 ----ELTTSSVEELQKFLDQSVKDSCEGLMVKMLDGPESHYEPSKRSRNWLKLKKDYLDG 555
Query: 449 -GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA 507
G LD+ ++G YYG G+R G FL+ + + + F + C++GTG SDE L
Sbjct: 556 VGDSLDLCVLGAYYGRGKRTGTYGGFLLGCYNQDSGE-----FETCCKIGTGFSDEMLQQ 610
Query: 508 VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTIRS 564
+ Y R + P + Y V ++S E PDVW E +L+ S + +
Sbjct: 611 L------YERFSKTTLDGPKATY-VFDSSAE-PDVWFEPTTLFEVLTADLSLSPVYKAGA 662
Query: 565 EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+ SLRFPR R+R DK D VEL
Sbjct: 663 STYDKGVSLRFPRFVRLRDDKSVEDATSSAQIVEL 697
>gi|67539798|ref|XP_663673.1| hypothetical protein AN6069.2 [Aspergillus nidulans FGSC A4]
gi|40738854|gb|EAA58044.1| hypothetical protein AN6069.2 [Aspergillus nidulans FGSC A4]
Length = 886
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 135/530 (25%), Positives = 234/530 (44%), Gaps = 97/530 (18%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH------PDAEDLFNVTCDL 199
K E K+I+ + L+LG++EK++ HE P AE+L L
Sbjct: 386 KGGPSEAKYIVRFLEGKLRLGLAEKTVLVALAQAVVSHEAALKGKKAPSAEELAEGEAIL 445
Query: 200 KLVCEKLK----------DRNQRHKRQ--DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEV 247
K V +L + + R+ ++ G ++P LA + GK+
Sbjct: 446 KTVYSELPAYEVIIPALLEHGLSNLREHCKLQPGIPIKPMLAKPTKSITEVLDRFEGKDF 505
Query: 248 VIECKFDGDRIQIH-------KN--GSEIHY---------FSRSFLDHSE-YGHAMSKI- 287
E K+DG+R QIH KN G+++ FSR+ D S+ Y ++K+
Sbjct: 506 TCEYKYDGERAQIHYVAPDETKNYPGAQLTLKESAGLSAIFSRNSEDLSKKYPDVLAKLS 565
Query: 288 --IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDV 343
I+ V +LD E + WD + F Q + + +D + D ++ C FAFD+
Sbjct: 566 TWIKPGV--KSFVLDCETVAWDVEAKKVLPF--QQLMTRKRKDVKAEDVKVKVCVFAFDL 621
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
L++ + + L++R +LL +P +G + +G ++++
Sbjct: 622 LFLNGEPTVKKPLRQRRDLLHSSFQPIEGEFQ--FAQYG---------------NTNDLE 664
Query: 404 EVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGG 459
+++ ++++ EG+++K L S +EP RS WLK+K +Y+ G LD+L++G
Sbjct: 665 QIQTLLDDSVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGVGDSLDLLVLGA 724
Query: 460 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
YYG G+R FL+A A ++ + + + C +GTG S+ LD + T L P
Sbjct: 725 YYGRGKRTSVYGAFLLA-----AYNSNSQTYETICNIGTGFSEAMLDELHTTLSPLV--I 777
Query: 520 EYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP----- 570
+ PK FY + K++PDVW+E K+ L+++ + E
Sbjct: 778 DRPK----PFYSHSTVPKDQPDVWLEPRYVWEVKTADLTLSPRYKAAADEFVGTTGGGGK 833
Query: 571 -YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
SLRFPR +VR DK ++ E+ ++G GG+ DD
Sbjct: 834 GVSLRFPRFIKVRDDKKPEQATTTRAVAEMYRKQEAVAKEGSGKGGVDDD 883
>gi|393218639|gb|EJD04127.1| DNA ligase I [Fomitiporia mediterranea MF3/22]
Length = 849
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 155/630 (24%), Positives = 276/630 (43%), Gaps = 105/630 (16%)
Query: 44 DYFSALRLILPSLDRERGSY-GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNA 102
DY S L+ + ++R Y G++ + + LI A+G S +V + ++
Sbjct: 259 DYKSLLQTVYLCINRLSPDYVGIELGIGESILIKAIGESTGRGLSVIKADLKR------E 312
Query: 103 GNFPMVAAEVLQRRQGMISGG-LTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNA 158
G+ +VA ++ + LT+ + L +A S ++A+K+S+++ L+
Sbjct: 313 GDLGLVAMTSKNSQKTIFKPKRLTVPYVFSNLREIALSSGHSSQAKKVSIITKLLAACQE 372
Query: 159 QEMKWIIMIILKDLKLGISEKS-------------------------IFHEFHPDAEDLF 193
E K+I+ + L++G +E+S + A L
Sbjct: 373 HEAKYIVRSLEGKLRIGNAERSVVVALAHAVVLHEKEKAGKKWSQEKLVSRLEQGANILK 432
Query: 194 NVTCDLKL---VCEKLKDRNQRHKRQDIEV--GKAVRPQLAMRIGDAHAAWRKLHGKEVV 248
+V +L V + + H R+ ++ G ++P LA + GK+
Sbjct: 433 SVYSELPSYDEVIPAIVESGIEHLREKCKLKPGVPLKPMLAKPTKAIGEVLDRCEGKKFT 492
Query: 249 IECKFDGDRIQIHK-NGSEIHYFSRSFLDHSEYGHAMSKIIEQ--NVLVDRC---ILDGE 302
E K+DG+R Q+HK + FSR+ D S+ ++EQ + + D +LD E
Sbjct: 493 CEYKYDGERAQVHKLEDGTVAVFSRNSEDMSK---KYPDLVEQLPHCVKDTAKTFVLDCE 549
Query: 303 MLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKER 359
+ +D ++ F QE++K R + + ++C FAFD+LY+ ++ + L ER
Sbjct: 550 AVAFDIKEDKLMPF---QELSKRKRKDVKVEDIQVRVCLFAFDLLYLNGEPLLQKPLSER 606
Query: 360 HELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEG 419
++L++ +P G + G + ++ F +E++++ EG
Sbjct: 607 RQILREHFQPVHGEFDFAKSSDG-----------------ETTEAIQAFLEESVKDGCEG 649
Query: 420 IVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLV 475
+++K L S +EP RS WLKLK +Y+ G LD++++G YYG G+R FL+
Sbjct: 650 LMIKMLETEASYYEPSKRSVNWLKLKKDYLAGVGDSLDLVVVGAYYGKGKRTNVYGAFLL 709
Query: 476 ALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNN 535
A + PD+ + + C++GTG S+E L A T LKP P +V
Sbjct: 710 ACYD---PDS--EEYQTICKIGTGFSEEALQAHYTTLKP------LENEKPRGDIKVGGA 758
Query: 536 SKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP--------YSLRFPRIDRVRYDKPW 587
+PDVW + K + +T+D+ S +++A SLRFPR R+R DK
Sbjct: 759 ---KPDVWFDP--KVVWEVLTADLSL--SPIYTAAQGLVEERGISLRFPRFIRIRDDKSA 811
Query: 588 HDCLDVQSFVELVHSSNGTTQKG--KEYGG 615
D + E+ + KG K GG
Sbjct: 812 DDATGPEQIAEMYERQSLAQTKGAKKRRGG 841
>gi|327279789|ref|XP_003224638.1| PREDICTED: DNA ligase 1-like [Anolis carolinensis]
Length = 913
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 163/659 (24%), Positives = 277/659 (42%), Gaps = 121/659 (18%)
Query: 10 IVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSA---LRLILPSLDRERGSY--- 63
+ + F WI++ R K + L + SV S L + L+R +Y
Sbjct: 286 LAVARTFEWIEQES----ARLKIIETLSNFFRSVIALSPEDLLPCVYLCLNRLGPAYEGL 341
Query: 64 --GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGM-- 119
G+ +++L L A G D A A G+ +VA E + QG
Sbjct: 342 ELGIGKTILMKALAQATGRQLDQIKA----------EAAEKGDLGLVA-ESSRTTQGTMF 390
Query: 120 ----ISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLG 175
+ G +L + R+ S + +KI ++ +L E ++I + L++G
Sbjct: 391 APPKLGAGAVFGKLQ-AIGRMMGSSSMNKKIDIIKSLFVACRHSEARYIARSLEGKLRIG 449
Query: 176 ISEKSIF-------------HEFHPDAED---------------------------LFNV 195
++E+S+ +F P+ D L N
Sbjct: 450 LAEQSVLSALAQAASLTPPGQKFPPEILDASKGKSAETRKSWLDERALIVKQAFCELPNY 509
Query: 196 TCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDG 255
+ ++ E + +H + I G ++P LA ++ E K+DG
Sbjct: 510 DIIVPVLLEHGVESLPKHCK--ITPGIPLKPMLAHPTKGIGEVLKRFEEAAFTCEYKYDG 567
Query: 256 DRIQIH--KNGSEIHYFSRSFLDHS-EYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLN 311
+R QIH +NG E+H +SR+ +++ +Y +S+I + + V+ CILD E + WD
Sbjct: 568 ERAQIHILENG-EVHIYSRNQENNTTKYPDIVSRIPKVKKSTVESCILDAEAVAWDPDSK 626
Query: 312 RFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVK 368
+ F Q + R + ++ Q+C +AFD+LY+ S++ + L +R LL+
Sbjct: 627 QIQPF---QVLTTRKRKDVDTEDIRVQVCVYAFDMLYLNGQSLVREPLTQRRTLLRDSFT 683
Query: 369 PSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--G 426
+G+ S+ N DE+ +F + +I++ EG+++K L
Sbjct: 684 EVEGQFLFAT-----------------SMDTSNTDEIAEFLERSIKDSCEGLMVKTLEVD 726
Query: 427 SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDT 485
+ +E RS WLKLK +Y+ G LD+++IG Y G G+R G FL+A D
Sbjct: 727 ATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGKGKRAGIYGGFLLACY-----DD 781
Query: 486 YPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE 545
F S C++GTG +DE+L+ + T LK + P+ P +Y+ ++ PD W+E
Sbjct: 782 ESEEFQSICKIGTGFTDEDLEKLHTSLKAHV----IPQPRP--YYRWGGTAE--PDHWLE 833
Query: 546 SPE----KSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+ K LSI+ R V SLRFPR R+R DK + EL
Sbjct: 834 THHVWEVKCADLSISPVHRAAAGLVDEEKGISLRFPRFLRLRDDKKPEEATTSAQVAEL 892
>gi|326437875|gb|EGD83445.1| DNA ligase 1 [Salpingoeca sp. ATCC 50818]
Length = 1207
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 198/409 (48%), Gaps = 55/409 (13%)
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKN-GSEIHYFSRSFLD 276
I G ++P LA ++ GK V E K+DG+R Q+H+N E+ +SR+ +
Sbjct: 826 ITPGIPMKPMLAHPTKGVDEVLQRFDGKTFVCEYKYDGERAQVHRNEKGEMFIYSRNSEN 885
Query: 277 HS-EYGHAMSKIIEQNVL---VDRCILDGEMLVWDTSLNRFAEFG--SNQEIAKAARDGL 330
H+ +Y ++ + N V +LD E + +D + + F S ++ A D
Sbjct: 886 HTTKYPDVIANV--PNAFAEGVSDFVLDCEAVAFDMTSQQILPFQVLSTRKRKDATED-- 941
Query: 331 SSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQ 390
S + Q+C FAFD+LY+ S++ + L R LL+ K +GR Q
Sbjct: 942 SVEVQVCLFAFDLLYLNGQSLVREPLHTRRSLLRSNFKHVQGRF---------------Q 986
Query: 391 GEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA 448
C LV + DE+ F +++I++ EG+++K L + +E RS WLKLK +Y+
Sbjct: 987 FADC--LVTSDTDEIGMFLEQSIKDSCEGLMIKTLTEDASYEIARRSHSWLKLKKDYLEG 1044
Query: 449 -GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA 507
G LD+++IGG+ G G+R G FL+A D + S C++GTG SDE+L
Sbjct: 1045 VGDTLDLVVIGGWLGKGKRTGTYGAFLLACY-----DEESEEYQSICKIGTGFSDEDLKT 1099
Query: 508 VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIR 563
+LKP+ +P ++Y+ +S PD W ++ + K+ LSI+ +
Sbjct: 1100 HFEQLKPHVIP------SPRNYYRY--DSTLAPDHWFDAAQVWEVKAADLSISPRHKAAA 1151
Query: 564 SEVFSAP-YSLRFPRIDRVRYDK------PWHDCLDVQSFVELVHSSNG 605
V + SLRFPR RVR DK + D+ + +LV +S G
Sbjct: 1152 GLVDAEKGISLRFPRFIRVRDDKKPDMATSAYQVADMYNSQDLVQNSRG 1200
>gi|187608350|ref|NP_001119860.1| DNA ligase 1 [Danio rerio]
Length = 1058
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 156/604 (25%), Positives = 253/604 (41%), Gaps = 101/604 (16%)
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMIS-G 122
G+ E+VL + A G D A A G+ +VA ++ M +
Sbjct: 490 GIGETVLMKAVAQATGRQLDKIKA----------EAQEKGDLGLVAESSRSNQRMMFAPA 539
Query: 123 GLTIKELNDLLDRLAS-SENRA--EKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEK 179
LT + + L +A S N A +KI ++ L E ++I+ + L++G++E+
Sbjct: 540 NLTAGGVFNKLKEIAHMSGNSAMNKKIDIIKGLFVACRFSEARYIVRSLAGKLRIGLAEQ 599
Query: 180 SIF-------------HEFHPDAED--------------------LFNVTCDLK------ 200
S+ EF P D L C++
Sbjct: 600 SVLAALSQAVCLTPPGQEFPPAVLDAGKGMSTENRRVFLEEKALILKQTYCEMPNYDAII 659
Query: 201 --LVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRI 258
L+ E + + K + G +RP LA ++ E K+DG+R
Sbjct: 660 PVLLKEGIDELPNHCK---LTPGVPLRPMLAHPTKGVGEVMKRFDEASFTCEYKYDGERA 716
Query: 259 QIH--KNGSEIHYFSRSFLDH-SEYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFA 314
QIH +NG E+ FSR+ D+ S+Y +S+I + + V C+LD E + WD +
Sbjct: 717 QIHILENG-EVRIFSRNQEDNTSKYPDIISRIPQVKKESVRSCVLDSEAVAWDREKKQIQ 775
Query: 315 EFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRL 374
F + D Q+C +AFD+LY+ S++ + L +R LL+
Sbjct: 776 PFQVLTTRKRKDVDASEIKVQVCVYAFDLLYLNGESLVREPLSKRRALLR---------- 825
Query: 375 ETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPG 432
E+ V G R SL A N + + +F ++++ + EG+++K L + +E
Sbjct: 826 ESFVEKEGEFVFAR-------SLDADNTETIAEFLEQSVRDSCEGLMVKTLEKHATYEIA 878
Query: 433 DRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFI 491
RS WLKLK +Y+ G +D+ +IG Y G G+R G FL+A D F
Sbjct: 879 KRSHNWLKLKKDYLEGVGDTVDLCVIGAYLGKGKRAGGYGGFLLACY-----DEENEEFQ 933
Query: 492 SFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE--- 548
S C++GTG DE+L+ LK + PK P +Y+V +++ PDVW+E+ +
Sbjct: 934 SVCKIGTGFKDEDLEQHYNFLKEHI----LPK--PRPYYRVDQSAE--PDVWLEAVQVWE 985
Query: 549 -KSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGT 606
K LS++ + V SLRFPR R+R DK D +L
Sbjct: 986 VKCADLSLSPVYKAAMGLVDPEKGISLRFPRFLRIRDDKKPEDATTGSQIADLYKKQQQI 1045
Query: 607 TQKG 610
+G
Sbjct: 1046 QNQG 1049
>gi|425766642|gb|EKV05245.1| DNA ligase [Penicillium digitatum Pd1]
gi|425775293|gb|EKV13571.1| DNA ligase [Penicillium digitatum PHI26]
Length = 853
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 134/528 (25%), Positives = 224/528 (42%), Gaps = 93/528 (17%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH------PDAEDLFNVTCDL 199
K E K+I+ + L+LG++EK++ HE P AE +
Sbjct: 353 KGGPSEAKYIVRFLEGKLRLGLAEKTVLVAVSRAVQTHEAESTGKKIPSAEQMAEGENIF 412
Query: 200 KLVCEKLKDRN------------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEV 247
K V +L + + + G ++P LA + GKE
Sbjct: 413 KTVYSELPAYEVIIPAVLEHGLLKLPEVCKLSPGIPIKPMLAKPTKSITEVLDRFEGKEF 472
Query: 248 VIECKFDGDRIQIH-KNGSEIHYFSRSFLDHSEYGHAMSKIIEQN----------VL--- 293
E K+DG+R QIH + +H + + + +S I +N VL
Sbjct: 473 TCEYKYDGERAQIHFVSPDSVHQYPGALDTLQKDSKGLSSIFSRNSEDLSKKYPDVLGKL 532
Query: 294 -------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVL 344
V +LD E + WDT + F Q + + +D + D ++ C +AFD+L
Sbjct: 533 DTWVKSDVKSFVLDCETVAWDTEAKKVLPF--QQLMTRKRKDVKAEDVKVKVCVYAFDLL 590
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
+ + +SL+ER EL+ + +P +G + +G NS+V +DE
Sbjct: 591 FFNGEPCVKKSLRERRELMHECFQPVEGEFQ--FAQYG-NSNV--------------LDE 633
Query: 405 VEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 460
+++ + +++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G Y
Sbjct: 634 IQELLEASVKASCEGLMVKMLDTAESGYEPSKRSRNWLKVKKDYLAGVGDSLDLVVLGAY 693
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
YG G+R FL+A A P+ DTY + C +GTG S+ L+ + L P
Sbjct: 694 YGRGKRTSVYGAFLLA-AYNPSSDTYE----TICNIGTGFSEALLEELHQTLVPLVIDR- 747
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP-----Y 571
P FY + K++PDVW E K+ L+++ + E
Sbjct: 748 -----PKPFYTHSAVPKDQPDVWFEPRLVWEVKTADLTLSPRYQAAADEFQGTTGGGKGV 802
Query: 572 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
SLRFPR + R DK + ++ E+ T++ GG+ DD
Sbjct: 803 SLRFPRFIKSRDDKKPDEATTTRAVAEMYRKQEAVTKETTSKGGVDDD 850
>gi|212224666|ref|YP_002307902.1| ATP-dependent DNA ligase [Thermococcus onnurineus NA1]
gi|83338493|gb|ABC11973.1| thermostable DNA ligase [Thermococcus onnurineus NA1]
gi|212009623|gb|ACJ17005.1| thermostable DNA ligase [Thermococcus onnurineus NA1]
Length = 562
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 221/499 (44%), Gaps = 84/499 (16%)
Query: 124 LTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE-- 178
LTIK + ++A + K+ L+ + +E K+I +L ++ G++E
Sbjct: 114 LTIKRVYQTFIKIAEASGEGSQDRKLKYLANIFMDAQPEEGKYIARTVLGMMRTGVAEGI 173
Query: 179 --KSIFHEFHPDAEDL---FNVTCDLKLVCEKLK-DRNQRHKRQDIEVGKAVRPQLAMRI 232
+I F AE + + +T D V + K + N + I++GK +RP LA
Sbjct: 174 LRDAIAEAFKVKAELVERAYMLTSDFGYVAKVAKLEGNDGLGKVHIQIGKPIRPMLAQNA 233
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNV 292
A ++ G E E K+DG R+Q+HK+G + +SR + + + I+ ++
Sbjct: 234 ASVKEALLEM-GAEAAFEIKYDGARVQVHKDGDRVVIYSRRLENVTRSIPEVVDAIKASI 292
Query: 293 LVDRCILDGEMLV---------WDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDV 343
++ I++GE++ + L RF + +E+ + L FDV
Sbjct: 293 KSEKAIVEGELVAVGEGGRPRPFQYVLRRFRRKYNIEEMIEKI--------PLELNLFDV 344
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEP---CWSLVAH 400
LYV +I +ER L+++V+ +GE LV
Sbjct: 345 LYVDGEPLIDTPFRERRAKLEEIVE---------------------EGEKLKLAQQLVTK 383
Query: 401 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGY 460
V+E E+F+K+ +E EG++ K L S +EPG+R KWLK+KP DLD++IIG
Sbjct: 384 KVEEAEEFYKKALELGHEGLMAKRLDSVYEPGNRGKKWLKIKPTM----EDLDLVIIGAE 439
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
+G GRR + FLVA A D + F+ +VG+G +DE+L LKP
Sbjct: 440 WGEGRRAHLLGSFLVA-----AYDPHSGEFVPVGKVGSGFTDEDLVEFTKMLKPLI---- 490
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDR 580
+ K ++E K +I +I+ +S + + ++LRFPR
Sbjct: 491 -----------IGGEGK-----FVEIEPKVVIQVTYQEIQ--KSPKYRSGFALRFPRYVA 532
Query: 581 VRYDKPWHDCLDVQSFVEL 599
+R DK + ++ +L
Sbjct: 533 LREDKSPEEADTIERIAQL 551
>gi|5830724|emb|CAB54763.1| K4R protein [Variola minor virus]
Length = 552
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 138/583 (23%), Positives = 254/583 (43%), Gaps = 52/583 (8%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKIYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G + E+ R + + LT+++++ L L+S +
Sbjct: 73 KDMLQDLGY--GYIGDTISTYFKENTEIRPRNKSI----LTLEDVDSFLTTLSSITKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + E
Sbjct: 127 QIKLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIE 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+ Q + V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 --NESKQNLDSISVSVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSFLDHSEY--GHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEI 322
+E +FSR+ Y + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSYKVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVQLPFGS---- 298
Query: 323 AKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
+ + +C F FD LY + L +R L+ V+ +P+
Sbjct: 299 LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYKRRSFLKDVM--------VEIPNRI 350
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLK 442
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+K
Sbjct: 351 VFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIK 399
Query: 443 PEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 499
+Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +G
Sbjct: 400 RDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SG 453
Query: 500 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI 559
D L + +L + + PK+ P + N PD +E P++S I I+
Sbjct: 454 HDDNTLRVLQDQL-TMVKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAE 509
Query: 560 RTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 510 FTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|301115426|ref|XP_002905442.1| DNA ligase, putative [Phytophthora infestans T30-4]
gi|262110231|gb|EEY68283.1| DNA ligase, putative [Phytophthora infestans T30-4]
Length = 3896
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 199/430 (46%), Gaps = 68/430 (15%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHS 278
G V P LA + + GK E K+DG+R QIH NG EI FSR+F + +
Sbjct: 524 GTPVSPMLARPTKAYAMVFDRFEGKPFTCEYKYDGERAQIHILPNG-EIAIFSRNFENST 582
Query: 279 E----YGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR 334
E A++ ++ V VD CI+D E++ D + N+ F Q ++ +R + +
Sbjct: 583 ERFPDVKLAITNAAKEGV-VDSCIVDAEVVAVDRATNKRLPF---QILSTRSRKNVKVED 638
Query: 335 ---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKV--VKPSKGRLET-LVPDHGLNSHVR 388
+C +AFD+L++ S + L R E L+++ VKP T L + G++
Sbjct: 639 IKIPVCIYAFDLLFLNGESFLGVPLARRREKLREMFDVKPGNFEFATSLDVEDGVDVKDN 698
Query: 389 PQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYI 446
P+ + VD+V F +E + EG+++K L + +EP +RS KWLKLK +Y+
Sbjct: 699 PEA------MEEAVDKVRNFLEEAVRENCEGLMVKTLEKEATYEPANRSHKWLKLKKDYL 752
Query: 447 RA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL 505
G D++ IG +YG G+R G +L+A + PDT F ++GTGLSDE L
Sbjct: 753 DGIGDSADLVPIGAFYGRGKRTGVYGAYLLACYD---PDT--EMFQPITKLGTGLSDEVL 807
Query: 506 DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE--------------SPEKSI 551
T+LK E PPS Y + K PDVW E SP+ +
Sbjct: 808 KQFYTQLK------EKVVDKPPSDYAIGEGIK--PDVWFEASCVWEILGADLSISPKYTA 859
Query: 552 ILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS------SNG 605
+ + + R I SLRFPR R+R DK + +L + +NG
Sbjct: 860 AIGLVAKDRGI---------SLRFPRFIRIRDDKDTTQATNSSQIADLYRAQGLTTLTNG 910
Query: 606 TTQKGKEYGG 615
+ +GG
Sbjct: 911 MADRSTMWGG 920
>gi|336374245|gb|EGO02582.1| hypothetical protein SERLA73DRAFT_175993 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387155|gb|EGO28300.1| hypothetical protein SERLADRAFT_458691 [Serpula lacrymans var.
lacrymans S7.9]
Length = 727
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 158/641 (24%), Positives = 265/641 (41%), Gaps = 133/641 (20%)
Query: 44 DYFSALRLILPSLDRERGSY-GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNA 102
D S L+ + ++R Y G++ + N L+ A+G S + A +++K
Sbjct: 141 DSKSLLQAVYLCINRLSPDYVGVELGIGENLLVKAIGQSTGRSAAQIKADFKK------E 194
Query: 103 GNFPMVAAEVLQRRQGMISGG-LTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNA 158
G+ +VA + + ++ + LTI + L +A+S A +K+S++ ++
Sbjct: 195 GDLGLVAMKSKKNQKTLFKAKPLTIPFVFSSLQEIATSSGHASQGKKVSIMVKILTACQG 254
Query: 159 QEMKWIIMIILKDLKLGISE---------------------------------------K 179
E K+I+ + L++G +E K
Sbjct: 255 FEAKYIVRSLEGKLRIGNAERTVLVALAHAAVLAEMERDQAKWTPHELVNRLDEAARVMK 314
Query: 180 SIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAW 239
S++ E P E + ++ + C H R + G ++P LA
Sbjct: 315 SVYSEL-PTYEKVIPALLEVGIAC--------LHDRCKLTPGIPLKPMLAKPTKAIGEVL 365
Query: 240 RKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCI 298
+ G + E K+DG+R Q+HK I FSR+ D S+ +IEQ + RCI
Sbjct: 366 HRFEGMDFTCEYKYDGERAQVHKMEDGTIGIFSRNSEDMSK---KYPDLIEQ---LPRCI 419
Query: 299 --------LDGEMLVWDTSLNRFAEFGSNQEIAKAARDGL---SSDRQLCYFAFDVLYVG 347
+D E + + S F Q ++K R + +C +AFD+LY+
Sbjct: 420 RASTNSFVIDAEAVAINKSTGMLMPF---QHLSKRKRKDVRFQDVTVHVCLYAFDLLYLN 476
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
++ + LK+R LL++ + G D S ++ +DE+E
Sbjct: 477 GEPLLQKDLKKRRALLRQHFQSIPGEF-----DFAKASD------------SNTIDEIEA 519
Query: 408 FFKETIENRDEGIVLKDLGSK---WEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGS 463
F +E+I++ EG+++K L S +EP RS WLKLK +Y+ G LD++++GGYYG
Sbjct: 520 FLEESIKDGCEGLMVKMLASDNSYYEPSRRSVNWLKLKKDYLHGVGDSLDLVVVGGYYGK 579
Query: 464 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
G+R FL+A DT F + C++GTG S+E+L LKP
Sbjct: 580 GKRANVYGAFLLACY-----DTNTEEFQTICKIGTGFSEEQLQTHYDMLKPL-------- 626
Query: 524 RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP--------YSLRF 575
+ +PDVW E K + +T+D+ S +++A SLRF
Sbjct: 627 -QSLNIRGDIKAGGAQPDVWFEP--KIVWEVLTADLSL--SPIYTAAQGLIEERGISLRF 681
Query: 576 PRIDRVRYDKPWHDCLDVQSFVE------LVHSSNGTTQKG 610
PR R R DK D + E L+ S T + G
Sbjct: 682 PRFIRPREDKSAEDSTSPEQIAEMYQRQTLIESKRNTNEIG 722
>gi|410493561|ref|YP_006908759.1| putative ATP-dependent DNA ligase [Abalone herpesvirus
Victoria/AUS/2009]
gi|408776091|gb|AFU90119.1| putative ATP-dependent DNA ligase [Abalone herpesvirus
Victoria/AUS/2009]
Length = 629
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 133/548 (24%), Positives = 237/548 (43%), Gaps = 92/548 (16%)
Query: 124 LTIKELNDLLDRLASSENR---AEKISVLSTLIKKTNAQ-EMKWIIMIILKDLKLGISEK 179
+T+KE+ + + +A+++ + +I++L L+K+ + E +++ L ++ G++E
Sbjct: 112 ITVKEVMEKMYEMATTQGKDSQKARIAILGDLLKRCGTKVEARYVARFCLGKMRTGLAEL 171
Query: 180 SI--------------------FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRH---KRQ 216
S+ E + F + D+ + +K+ + K
Sbjct: 172 SVVEALGQALYRWETGDSVQKKMKEGAGVVKTAFTLVPDMGKILRAVKNEGGMYNLTKSC 231
Query: 217 DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-KNGSEIHYFSRSFL 275
+ G ++P LA KL G E K+DG+R QIH G +I FSR+
Sbjct: 232 ESAAGIPMKPMLATPTTGIEDVMSKLKGAVFSCEYKYDGERAQIHYMEGGKIRIFSRNSE 291
Query: 276 DHSE-YGHAMSKIIEQ-NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD 333
+++E Y ++++ + N V ILD E + WD + F Q++A R + +
Sbjct: 292 NNTEKYPDIINRLPQSINEGVKSFILDAEAVAWDVEKKQILPF---QKLATRKRKDVKEE 348
Query: 334 R---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQ 390
Q+C FAFDVLY+ S +++S +ER EL++ +G+ D
Sbjct: 349 EITVQVCVFAFDVLYMNGVSQVNKSFRERRELMRSCFTEVEGQF-IFARD---------- 397
Query: 391 GEPCWSLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA 448
++++ ++++ F + ++ EG+++K D+ + +E RS WLKLK +Y+
Sbjct: 398 ------MMSNKPEDIQTFMNKAVKEDCEGLMIKTLDVNATYEIAKRSRSWLKLKKDYMEG 451
Query: 449 GSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA 507
D LD+++IGG+ G G+R G FL+A PD + + S C++GTG SDE+L
Sbjct: 452 VCDTLDLVVIGGFNGVGKRTGTYGAFLLACYN---PDN--QMYESICKIGTGFSDEDL-- 504
Query: 508 VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWI--------------ESPEKSIIL 553
+ + E + Y V S +PD W SP +
Sbjct: 505 ----INQHKLLSEVRREGAQENYLV--GSTMKPDQWFLPSYVWEVKVADLTVSPVHKAAI 558
Query: 554 SITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEY 613
+ S I SLRFPR +RVR DK D E+ + + +
Sbjct: 559 GLVSQTEGI---------SLRFPRFERVREDKKGEDATTSAQVAEMYNGQDQIVNAKRRA 609
Query: 614 GGLQDDKP 621
G + P
Sbjct: 610 EGEAEGAP 617
>gi|119480745|ref|XP_001260401.1| DNA ligase Cdc9, putative [Neosartorya fischeri NRRL 181]
gi|119408555|gb|EAW18504.1| DNA ligase Cdc9, putative [Neosartorya fischeri NRRL 181]
Length = 840
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 143/567 (25%), Positives = 251/567 (44%), Gaps = 87/567 (15%)
Query: 103 GNFPMVAAEVLQRRQGMISGG-LTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNA 158
G+ +VAA+ + M LT++ +++ L +A + + +KIS + L+
Sbjct: 308 GDLGLVAAKSRSNQPTMFKPKPLTVRGVHEGLIAIAKIQGQGSQDKKISAIKKLL----- 362
Query: 159 QEMKWIIMIILKDLKLGISEKSIF---------HEFH------PDAEDLFNVTCDLKLVC 203
E K+I+ + L+LG++EK++ HE P E + LK V
Sbjct: 363 -EAKFIVRFLEGKLRLGLAEKTVLVALAQAVVAHEAAVRGEKTPSPEKMAQGEAVLKTVY 421
Query: 204 EKLKDRN------------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIEC 251
+L K ++ G ++P LA + GK+ E
Sbjct: 422 SELPAYEVIIPAMLEHGLFNLPKVCKLQPGIPIKPMLAKPTKSITEVLNRFEGKDFTCEY 481
Query: 252 KFDGDRIQIHKNGSEIH-YFSRSFLDHSE-YGHAMSKIIEQNVL--VDRCILDGEMLVWD 307
K+DG+R QIH + + FSR+ D S+ Y ++K+ E V V +LD E + WD
Sbjct: 482 KYDGERAQIHYDSKGLSAIFSRNSEDLSKKYPDVLAKL-ETWVKDGVKSFVLDCETVAWD 540
Query: 308 TSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQK 365
T + F Q + + +D + D ++ C FAFD+L++ + ++L+ER ELL
Sbjct: 541 TVNKKVLPF--QQLMTRKRKDVKAEDVKVKVCIFAFDLLFLNGEPTVKKTLRERRELLHS 598
Query: 366 VVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL 425
+ +G + HG ++++E++ E+++ EG+++K L
Sbjct: 599 SFEVVEGEFQ--FAQHGDT---------------NDLEEIQNLLDESVKASCEGLMVKML 641
Query: 426 G---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERP 481
S +EP RS WLK+K +Y+ G LD++++G Y+G G+R FL+A
Sbjct: 642 DTEESGYEPSKRSRNWLKVKKDYLAGVGDSLDLVVLGAYHGRGKRTSVYGAFLLA----- 696
Query: 482 APDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPD 541
A ++ + + + C +GTG S+ L+ + +L P + PK FY +N K++PD
Sbjct: 697 AYNSSTQTYETICNIGTGFSEALLEELYKELSPL--TIDRPK----PFYSHSNVPKDQPD 750
Query: 542 VWIES----PEKSIILSITSDIRTIRSEV-----FSAPYSLRFPRIDRVRYDKPWHDCLD 592
VW E K+ L+++ + E SLRFPR + R DK
Sbjct: 751 VWFEPRLVWEVKTADLTLSPRYKAAADEFVGTTGGGKGVSLRFPRFIKSRDDKKPEQATT 810
Query: 593 VQSFVELVHSSNGTTQKGKEYGGLQDD 619
++ E+ ++ GG+ DD
Sbjct: 811 TRAVAEMYRKQEAVLKENTGKGGVDDD 837
>gi|212532871|ref|XP_002146592.1| DNA ligase Cdc9, putative [Talaromyces marneffei ATCC 18224]
gi|210071956|gb|EEA26045.1| DNA ligase Cdc9, putative [Talaromyces marneffei ATCC 18224]
Length = 862
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 196/439 (44%), Gaps = 67/439 (15%)
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLD 276
++ G ++P LA + GKE E K+DG+R QIH + IH F +
Sbjct: 451 LQPGVPLKPMLAKPTKSITEVLNRFEGKEFTCEYKYDGERAQIHYVSPDSIHQFPNAATT 510
Query: 277 HSEYGHAMSKIIEQN----------VL----------VDRCILDGEMLVWDTSLNRFAEF 316
+ +S I +N +L V +LD E + WD + + F
Sbjct: 511 LQKDAKGLSSIFSRNSEDLSKKYPDILAKLDTWIKPGVSSFVLDCETVAWDMANKKVLPF 570
Query: 317 GSNQEIAKAARDGLSSDRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRL 374
Q + + +D + D ++ C FAFD+L++ + +SL+ER +LL + +P++G
Sbjct: 571 --QQLMTRKRKDVKAEDVKVKVCVFAFDLLFLNGEPTVKKSLRERRQLLHEAFQPTEG-- 626
Query: 375 ETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEP 431
+ H + +DE++ +++++ EG+++K L S +EP
Sbjct: 627 -----EFAFAQHSN----------TNELDEIQSLLEDSVKASCEGLMVKMLDTEESGYEP 671
Query: 432 GDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRF 490
RS WLK+K +Y++ G LD++++G Y+G G+R FL+A A + + F
Sbjct: 672 SKRSRNWLKVKKDYLQGLGDSLDLVVLGAYFGRGKRTSVYGAFLLA-----AYNASKQSF 726
Query: 491 ISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES---- 546
+ C +GTG S+ L+ + +L P + PK FY+ + K++PDVW E
Sbjct: 727 ETICNIGTGFSEALLEELHKELSPLV--IDRPK----PFYEHSTVPKDQPDVWFEPRLVW 780
Query: 547 PEKSIILSITSDIRTIRSEVFSAP------YSLRFPRIDRVRYDKPWHDCLDVQSFVELV 600
K+ L+++ + EV SLRFPR + R DK ++ E+
Sbjct: 781 EVKAADLTLSPRYKAASEEVVGTSGADGKGISLRFPRYIKARDDKKPEQATTTRAVAEMY 840
Query: 601 HSSNGTTQKGKEYGGLQDD 619
++ GG+ DD
Sbjct: 841 RRQEAVAKETAGKGGVDDD 859
>gi|386783456|pdb|4EQ5|A Chain A, Dna Ligase From The Archaeon Thermococcus Sibiricus
Length = 571
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 125/499 (25%), Positives = 237/499 (47%), Gaps = 64/499 (12%)
Query: 114 QRRQGMISGGLTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILK 170
++++ S LTI+ + + L ++A + ++ K+ L+ L + E K++ +L
Sbjct: 113 RKQKSFFSQPLTIERVYNTLVKIAEASGAGSQDRKLKYLANLFMDASPDEGKYLARTVLG 172
Query: 171 DLKLGISEKSIFHEFHPDA--------EDLFNVTCDLKLVCEKLK-DRNQRHKRQDIEVG 221
++ G++E + + DA E + +T D V + K + ++ + I+VG
Sbjct: 173 IMRTGVAE-GLLRDALADAFKVRVELVERAYMLTSDFGFVAKVAKLEGDEGLAKVKIQVG 231
Query: 222 KAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYG 281
K ++P LA + A ++ G E E K+DG R+Q+HKNG+++ +SR + ++
Sbjct: 232 KPIKPMLAQMAANVREALVEMGG-EAEFEIKYDGARVQVHKNGNKVLIYSRRLENVTKSI 290
Query: 282 HAMSKIIEQNVLVDRCILDGEML-VWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFA 340
+ + +++ + ++ I++GE++ V +T R ++ + K + + L
Sbjct: 291 PEVVERVKEALKPEKVIVEGELVAVEETGRPRPFQYVLRRFRRKYNIEEMIEKIPLELNL 350
Query: 341 FDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAH 400
FD+LYV ++I ER ++L+ VV N ++ +L+
Sbjct: 351 FDILYVDGQNMIDTPFMERRKVLESVVNS--------------NEWIKS----AENLITK 392
Query: 401 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGY 460
+ +E E F+ + ++ EG++ K L S +EPG+R KWLK+KP +LD++++G
Sbjct: 393 SPEEAEAFYHKALDLGHEGLMAKRLDSTYEPGNRGKKWLKIKPTM----ENLDLVVLGAE 448
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
+G GRR G ++ FL+ A D F+ +VG+G +DE+L LKP +K
Sbjct: 449 WGEGRRSGVLSSFLLG-----AYDPVKGDFVPVGKVGSGFTDEDLVEFTKMLKPLIKK-- 501
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDR 580
+ KE +E K +I +I+ +S + + ++LRFPR
Sbjct: 502 -------------EHGKE-----VELEPKVVIEVAYQEIQ--KSPKYESGFALRFPRYIA 541
Query: 581 VRYDKPWHDCLDVQSFVEL 599
+R DK D VQ EL
Sbjct: 542 LREDKGPEDADTVQRLAEL 560
>gi|452077113|gb|AGF93082.1| DNA ligase I, ATP-dependent Dnl1 [uncultured organism]
Length = 567
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 137/500 (27%), Positives = 231/500 (46%), Gaps = 62/500 (12%)
Query: 103 GNFPMVAAEVLQRRQGMI--SGGLTIKELNDLLDRLASSENRA---EKISVLSTLIKKTN 157
G+ A ++ ++R+ M+ LT ++ + L +L KI+ +S L+ +
Sbjct: 88 GDLGKTAEKLTKKRKQMVLAEQNLTTSKVFENLRKLPEITGEGSVDRKIATVSELLTTAS 147
Query: 158 AQEMKWIIMIILKDLKLGISE----KSIFHEFH--PDA-EDLFNVTCDLKLVCEKLKDRN 210
K+II IL DL++G++E +I F+ P+ E + + D V + +
Sbjct: 148 PTGAKFIIRTILGDLRIGVAEGRLRDAIAEAFNIPPEPIEHAYMLANDYGKVAKAAAKKG 207
Query: 211 QRHKRQ-DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHY 269
++ Q D+ +G+ VRP LA R D ++ G E E K DG RIQ HK G EI
Sbjct: 208 KKGLSQLDLTIGRPVRPMLAQRSDDIEDIIDRMGG-EAAFETKLDGIRIQPHKQGDEIFL 266
Query: 270 FSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR-- 327
F+R D++ + + + + V D I+DGE++ D F QE+ + R
Sbjct: 267 FTRRMKDYTHMFPDLEEAVNEAVKPDEAIVDGELVAIDKDTGNPMPF---QEVLRRRRKY 323
Query: 328 --DGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNS 385
+ +S + + + FDVL G ++I + +ER E L++++ P + + V D +
Sbjct: 324 EIEKVSEEIPVHIYLFDVLLSGGETMIEKPYRERREKLEEMIDPGE---KVRVVDKEILE 380
Query: 386 HVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEY 445
R E++ F K+ + EG++ K+L S + G R WLKLK E
Sbjct: 381 DER---------------EIKSFKKKVVSQGHEGLLAKNLDSIYRAGRREFAWLKLKAEV 425
Query: 446 IRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL 505
LD++ +G + G G R G +L+A A D R + RVG+G +D++L
Sbjct: 426 ----ETLDLVAVGAFAGKGDRAGTYGSYLLA-----ARDPEKGRMKTVSRVGSGFTDKDL 476
Query: 506 DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSIT-SDIRTIRS 564
+ K F+K K+ P + +S+ PD W + E I I +I+ S
Sbjct: 477 EKFTRK----FKKIRIEKK-PENL-----DSEIEPDYWFKPQE---IFEINYEEIQKSPS 523
Query: 565 EVFSAPYSLRFPRIDRVRYD 584
E ++ Y LRFPR ++R D
Sbjct: 524 ETHTSGYGLRFPRYVQIRED 543
>gi|66821251|ref|XP_644124.1| DNA ligase I [Dictyostelium discoideum AX4]
gi|74926714|sp|Q869E1.1|DNL1_DICDI RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|60472186|gb|EAL70139.1| DNA ligase I [Dictyostelium discoideum AX4]
Length = 1192
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 202/413 (48%), Gaps = 57/413 (13%)
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK--NGSEIHYFSRSFL 275
++VG V+P LA + E E K+DG+R QIH+ +G+ H ++R+
Sbjct: 810 LKVGIPVKPMLAQPTTGISQMLDRFSDMEFTCEFKYDGERAQIHRLPDGT-THIYTRNLE 868
Query: 276 DHSE----YGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS 331
D+++ ++K + NV ILD E + +D + + F Q ++ AR +
Sbjct: 869 DYTQKYPDIVANVTKFVGPNV--KSFILDCEAVAFDAATKKILSF---QVLSTRARKSVQ 923
Query: 332 SDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVR 388
+ +C FAFD+LY+ S+I + L +R E L +E + G+ + +
Sbjct: 924 LSQIKVPVCVFAFDLLYLNGQSLIDEPLIKRREHL----------VENFIASDGVFAFAK 973
Query: 389 PQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYI 446
+S ++ +V++++ + +E +E EG+++K L K +EP RS WLK+K +Y+
Sbjct: 974 ------YSNIS-DVNDIQSYLEEAVEGNCEGLMVKTLKEKSIYEPSRRSYNWLKIKKDYM 1026
Query: 447 RAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL 505
+ +D LD++ IG +YG G+R G +L+A D F + C++GTG SDE+L
Sbjct: 1027 QGMTDSLDLVPIGAWYGKGKRTGTYGAYLLACY-----DENNEEFQTLCKIGTGFSDEQL 1081
Query: 506 DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIR 560
++LKP+ P + ++ +++ K PDVW SP + LSI S +
Sbjct: 1082 TTFTSQLKPHLI------NQPRNQFRFSDSIK--PDVWF-SPSCVWEVLAADLSI-SPVH 1131
Query: 561 TIRSEVF--SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 611
T S + + +LRFPR R+R DK D V++ + +Q K
Sbjct: 1132 TAASGILDPNKGIALRFPRFIRIRPDKSPEDATSSDQVVDMYQNQKINSQSSK 1184
>gi|449329253|gb|AGE95526.1| DNA ligase [Encephalitozoon cuniculi]
Length = 589
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 223/476 (46%), Gaps = 60/476 (12%)
Query: 133 LDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF----HEF 185
+ R+A+ E + + K ++ ++ K + E K++I +I LK+G++ K++ + F
Sbjct: 124 MRRVANEEGPRSSSSKKRIILGMMVKCSPLESKYLIRLIEGRLKIGLALKTVLISLANVF 183
Query: 186 HPDAED----LFNVTCDLKLVCEKLKDRNQRHKRQDIEV--GKAVRPQLAMRIGDAHAAW 239
D D FN D+ + + L + +V G ++P L+ D +A+
Sbjct: 184 SDDKIDEIKAAFNRQPDIGRLADCLLEHGVEGLSTKFQVTPGIPLKPMLSNPSKDLTSAF 243
Query: 240 RKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDR-CI 298
+++ K E K+DG+R+QIH+ S + FSR+ +E + + + + DR I
Sbjct: 244 KRVENKSFTCEYKYDGERVQIHRFDSRVETFSRNSEKTTEKYPDLMGLYD---VSDRDFI 300
Query: 299 LDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQS 355
+DGE++ ++ R F Q + R + S++ +C F FD++Y S I +
Sbjct: 301 VDGEIVAYNQKERRILPF---QVLTTRKRKRVESNKIEVHVCVFVFDLIYFDGRSWIDEP 357
Query: 356 LKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN 415
L+ER +L K G+ + + C +E E FF +++EN
Sbjct: 358 LEERRRVLHSSFKEIDGKFHF------------AEFKDC-----ETPEEAETFFNKSVEN 400
Query: 416 RDEGIVLKDLGS--KWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQ 472
EG+++K LGS + P RS KW+K+K +Y+ + SD LD++++G YYG GRR G
Sbjct: 401 NFEGMMIKTLGSDATYLPSQRSNKWIKIKKDYLESMSDSLDLVVMGAYYGKGRRAGFYGG 460
Query: 473 FLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV 532
FL+ + + +F + C++GTG D L + +L + P Y
Sbjct: 461 FLLGVY-----NDEEEKFEALCKIGTGFDDSILSKLHEQLSSSL-------CSAPKNYSY 508
Query: 533 TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS---APYSLRFPRIDRVRYDK 585
+ K PDVW+E+ + + + I S +S SLRFPR R R DK
Sbjct: 509 KESVK--PDVWVEAKYVWEVRAAGISLSPIYSAAWSKGEKGISLRFPRFIRERDDK 562
>gi|255719318|ref|XP_002555939.1| KLTH0H01408p [Lachancea thermotolerans]
gi|238941905|emb|CAR30077.1| KLTH0H01408p [Lachancea thermotolerans CBS 6340]
Length = 723
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 133/522 (25%), Positives = 228/522 (43%), Gaps = 75/522 (14%)
Query: 124 LTIKELNDLLDRLASSENR---AEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT E+ L +A S+ + K+ ++ ++ E K++I + L++G++EKS
Sbjct: 233 LTTGEVFSNLQAIARSQGKDSQLRKVQLIKRMLTACQGLEAKFLIRSLESKLRIGLAEKS 292
Query: 181 IFHEF------------HPDAE----------DLFNVTCDLKLVCEKLKDRN--QRHKRQ 216
+ P +E D F + ++V E + + K
Sbjct: 293 VLVALSKALLTYEHNGKEPSSELVDTAEQKIRDAFCQVPNYQIVIETALEHGIMELDKHC 352
Query: 217 DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSF 274
+ G ++P LA + G+ E K+DG+R Q+H +GS + +SR+
Sbjct: 353 VLTPGIPLKPMLAKPSKSISEVLDRFQGQRFTCEYKYDGERAQVHLLPDGS-MRIYSRNG 411
Query: 275 LDHSE-YGHA-MSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSS 332
+ +E Y +S I ILD E + WD N F Q ++ R G++
Sbjct: 412 ENMTERYPEIRISDFIADPARTHTLILDCEAVAWDKEKNTILPF---QVLSTRKRKGVAV 468
Query: 333 DR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
+ ++C FAFD+L D +I + L ER L++ + P G L+ L S V
Sbjct: 469 EDVKVRVCLFAFDILCYNDEPLITRPLAERRACLERALVPVPGELQ-------LASEV-- 519
Query: 390 QGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYI 446
++DE++ + + + + EG+++K L S +EP RS WLKLK +Y+
Sbjct: 520 --------TTMSLDELQHYLDQAVRDCCEGLMVKILEGEESHYEPSKRSRNWLKLKKDYL 571
Query: 447 RA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL 505
+ G LD+ ++G YYG G+R G FL+ + + + + + C++GTG S+E L
Sbjct: 572 QGVGDSLDLCVLGAYYGRGKRTGTYGGFLLGCYNQDSGE-----YETCCKIGTGFSEEML 626
Query: 506 DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRTI 562
+ +L P P P +FY ++ PDVW E +L+ S +
Sbjct: 627 QTLFDRLSP----TAIP--TPKAFY--VHSESAPPDVWFEPTLLFEVLTADLSLSPVYKA 678
Query: 563 RSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSN 604
+ + SLRFPR R+R DK + + VE S +
Sbjct: 679 GTSSYGKGISLRFPRFIRLRDDKTPEEATSSEQVVEFYESQS 720
>gi|94485421|gb|ABF24530.1| DNA ligase [Variola virus]
gi|94485624|gb|ABF24732.1| DNA ligase [Variola virus]
Length = 552
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 138/583 (23%), Positives = 254/583 (43%), Gaps = 52/583 (8%)
Query: 25 AAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDS 84
A+ + K + D D D + ++L+LP LD + K+ + +I +
Sbjct: 17 ASGYKEKSKLIRDFITDRDDKYLIIKLLLPGLDDRIYNMNDKQIIKIYSII----FKQSQ 72
Query: 85 ADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE 144
D ++ + + G F E+ R + + LT+++++ L L+S +
Sbjct: 73 KDMLQDLGY--GYIGDTISTFFKENTEIRPRNKSI----LTLEDVDSFLTTLSSITKESH 126
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCE 204
+I +L+ + ++K ++M+I KDLK+ + + + P A D+F + +LK + +
Sbjct: 127 QIKLLTDIASVCTCNDLKCVVMLIDKDLKIKAGPRYVLNAISPHAYDVFRKSNNLKEIIK 186
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+ Q + V + P LA + A++K + E K+DG+R+Q+HKN
Sbjct: 187 --NESKQNLDSISVSVMTPINPMLAESCDSVNKAFKKFPSG-MFAEVKYDGERVQVHKNN 243
Query: 265 SEIHYFSRSFLDHSEY--GHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEI 322
+E +FSR+ Y + I + +LD E+++ D N FGS
Sbjct: 244 NEFAFFSRNMKPVLSYKVDYLKEYIPKAFKKATSIVLDSEIVLVDEH-NVQLPFGS---- 298
Query: 323 AKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
+ + +C F FD LY + L +R L+ V+ +P+
Sbjct: 299 LGIHKKKEYKNSNMCLFVFDCLYFDGFDMTDIPLYKRRSFLKDVM--------VEIPNRI 350
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLK 442
+ S + N ++ + + + EG+VLKD+ +EPG R +WLK+K
Sbjct: 351 VFSELTN---------ISNESQLTDVLDDALTRKLEGLVLKDINGVYEPGKR--RWLKIK 399
Query: 443 PEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 499
+Y+ GS D++++G YYG G +GG +A FL+ + ++ + ++ C +G
Sbjct: 400 RDYLNEGSMADSADLVVLGAYYGKGAKGGIMAVFLMGCYD---DESGKWKTVTKC---SG 453
Query: 500 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI 559
D L + +L + + PK+ P + N PD +E P++S I I+
Sbjct: 454 HDDNTLRVLQDQL-TMVKINKDPKKIPE---WLVVNKIYIPDFVVEDPKQSQIWEISGAE 509
Query: 560 RTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
T + S+RFPR R+R DK W + + V L S
Sbjct: 510 FTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTKS 552
>gi|19074041|ref|NP_584647.1| DNA LIGASE [Encephalitozoon cuniculi GB-M1]
gi|19068683|emb|CAD25151.1| DNA LIGASE [Encephalitozoon cuniculi GB-M1]
Length = 589
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 223/476 (46%), Gaps = 60/476 (12%)
Query: 133 LDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF----HEF 185
+ R+A+ E + + K ++ ++ K + E K++I +I LK+G++ K++ + F
Sbjct: 124 MRRVANEEGPRSSSSKKRIILGMMVKCSPLESKYLIRLIEGRLKIGLALKTVLISLANVF 183
Query: 186 HPDAED----LFNVTCDLKLVCEKLKDRNQRHKRQDIEV--GKAVRPQLAMRIGDAHAAW 239
D D FN D+ + + L + +V G ++P L+ D +A+
Sbjct: 184 SDDKIDEIKAAFNRQPDIGRLADCLLEHGVEGLSTKFQVTPGIPLKPMLSNPSKDLTSAF 243
Query: 240 RKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDR-CI 298
+++ K E K+DG+R+QIH+ S + FSR+ +E + + + + DR I
Sbjct: 244 KRVENKSFTCEYKYDGERVQIHRFDSSVETFSRNSEKTTEKYPDLMGLYD---VSDRDFI 300
Query: 299 LDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQS 355
+DGE++ ++ R F Q + R + S++ +C F FD++Y S I +
Sbjct: 301 VDGEIVAYNQKERRILPF---QVLTTRKRKRVESNKIEVHVCVFVFDLIYFDGRSWIDEP 357
Query: 356 LKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN 415
L+ER +L K G+ + + C +E E FF +++EN
Sbjct: 358 LEERRRVLHSSFKEIDGKFHF------------AEFKDC-----ETPEEAETFFNKSVEN 400
Query: 416 RDEGIVLKDLGS--KWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQ 472
EG+++K LGS + P RS KW+K+K +Y+ + SD LD++++G YYG GRR G
Sbjct: 401 NFEGMMIKTLGSDATYLPSQRSNKWIKIKKDYLESMSDSLDLVVMGAYYGKGRRAGFYGG 460
Query: 473 FLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV 532
FL+ + + +F + C++GTG D L + +L + P Y
Sbjct: 461 FLLGVY-----NDEEEKFEALCKIGTGFDDSILSKLHEQLSSSL-------CSAPKNYSY 508
Query: 533 TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS---APYSLRFPRIDRVRYDK 585
+ K PDVW+E+ + + + I S +S SLRFPR R R DK
Sbjct: 509 KESVK--PDVWVEAKYVWEVRAAGISLSPIYSAAWSKGEKGISLRFPRFIRERDDK 562
>gi|350636886|gb|EHA25244.1| hypothetical protein ASPNIDRAFT_186220 [Aspergillus niger ATCC
1015]
Length = 915
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 134/528 (25%), Positives = 225/528 (42%), Gaps = 93/528 (17%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH------PDAEDLFNVTCDL 199
K E K+I+ + L+LG++EK++ HE P AE L L
Sbjct: 415 KGGPSEAKYIVRFLEGKLRLGLAEKTVLVALAQAVVAHEAAMEGHKTPSAEKLAEGEAIL 474
Query: 200 KLVCEKLK------------DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEV 247
K V +L + K ++ G ++P LA + GKE
Sbjct: 475 KTVYSELPAYEVIIPAILEHGLSNLPKVCKLQPGIPLKPMLAKPTKSITEVLDRFEGKEF 534
Query: 248 VIECKFDGDRIQIHKNGSE-IHYFSRSFLDHSEYGHAMSKIIEQN----------VL--- 293
E K+DG+R QIH + IH + + + +S I +N VL
Sbjct: 535 TCEYKYDGERAQIHYVAPDSIHQYPGATATLKKDAKGLSAIFSRNSEDLSKKYPDVLAKL 594
Query: 294 -------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVL 344
V +LD E + WDT + F Q + + +D + D ++ C FAFD+L
Sbjct: 595 DGWIKEGVQSFVLDCETVAWDTENKKVLPF--QQLMTRKRKDVKAEDVKVKVCIFAFDLL 652
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
++ + +SL+ER ELL + + ++G + +G N++V +DE
Sbjct: 653 FLNGEPTVKKSLRERRELLHESFQVTEGEFQ--FAQYG-NTNV--------------LDE 695
Query: 405 VEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 460
++ ++++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G Y
Sbjct: 696 IQTLLDDSVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVLGAY 755
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
+G G+R FL+A A ++ + + + C +GTG S+ L+ L P +
Sbjct: 756 HGRGKRTSVYGAFLLA-----AYNSSTQTYETICNIGTGFSEAVLEEFYNALSPL--TID 808
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP-----Y 571
PK FY +N K++PDVW E K+ L+++ + E
Sbjct: 809 RPK----PFYSHSNVPKDQPDVWFEPRLVWEVKTADLTLSPRYKAAADEFMGTTGGGKGV 864
Query: 572 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
SLRFPR + R DK ++ E+ ++ GG+ DD
Sbjct: 865 SLRFPRFIKSRDDKKPEQATTTRAVAEMYRKQEAVQKENAGKGGVDDD 912
>gi|167522421|ref|XP_001745548.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775897|gb|EDQ89519.1| predicted protein [Monosiga brevicollis MX1]
Length = 1132
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 131/513 (25%), Positives = 227/513 (44%), Gaps = 80/513 (15%)
Query: 103 GNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNAQ 159
G+ A QG+ + L D+ + L ENR E+ V + + +
Sbjct: 311 GDVSDTMASFFATSQGLRPAAQSTLSLEDVENLLRQLENRTTIDEQTRVFRQHLPRMTTE 370
Query: 160 EMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIE 219
++++++ I DL++ K I +P A + + + DL + ++ KR D+
Sbjct: 371 DLRYVVRHIKHDLRIFAGSKIILSALNPGAYEAWKASNDLYALVQRCLKHGPSLKR-DVS 429
Query: 220 VGKA----VRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF- 274
V + V+P LA A +K ++ E K+DG+R+Q+HK G +FSRS
Sbjct: 430 VRASLMTPVKPMLAEACRSYEMAVQKC-PNGILAEIKYDGERVQVHKQGDNFRFFSRSLK 488
Query: 275 --LDH------------SEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQ 320
DH +GH M ILD E+L+ DT+ ++ FG+
Sbjct: 489 EVQDHKISFFRESIRQACPHGHTM-------------ILDAEVLMVDTTTSKPLPFGT-L 534
Query: 321 EIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRL----ET 376
+ K R ++ Q C F FD+L+ +++ ++++ER LL V + +T
Sbjct: 535 GVHKKTR---FTNAQPCLFIFDILHFNGRNLMDETMEERRRLLTSHVVSVHNEIMYSEQT 591
Query: 377 LVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSG 436
+PD + + + + EG+VLKD S +EP R
Sbjct: 592 AIPD---------------------LPTLRALMTKVMRENLEGLVLKDRHSVYEPSKR-- 628
Query: 437 KWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISF 493
WLK+K +Y+ +G+ D+ ++G ++G+G +GG ++ +L+ + D R ++
Sbjct: 629 HWLKMKKDYLESGAMADTADLALLGAWFGTGSKGGLLSVYLMGCRD----DNGVWRTVTK 684
Query: 494 CRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIIL 553
C G G D ++DA K+ P +K + P + ++ + S+ PD I P ++ IL
Sbjct: 685 C--GNGFDDAQVDAYHRKMLPLMQKVSQDRSKVPGWLRI-DESRLVPDYIIRDPNQAPIL 741
Query: 554 SITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDK 585
I + S SA S+RFPRI RVR DK
Sbjct: 742 EI-AGAEFSESRAHSADGISIRFPRIARVRSDK 773
>gi|242398869|ref|YP_002994293.1| DNA ligase [Thermococcus sibiricus MM 739]
gi|242265262|gb|ACS89944.1| DNA ligase [Thermococcus sibiricus MM 739]
Length = 560
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 125/499 (25%), Positives = 237/499 (47%), Gaps = 64/499 (12%)
Query: 114 QRRQGMISGGLTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILK 170
++++ S LTI+ + + L ++A + ++ K+ L+ L + E K++ +L
Sbjct: 102 RKQKSFFSQPLTIERVYNTLVKIAEASGAGSQDRKLKYLANLFMDASPDEGKYLARTVLG 161
Query: 171 DLKLGISEKSIFHEFHPDA--------EDLFNVTCDLKLVCEKLK-DRNQRHKRQDIEVG 221
++ G++E + + DA E + +T D V + K + ++ + I+VG
Sbjct: 162 IMRTGVAE-GLLRDALADAFKVRVELVERAYMLTSDFGFVAKVAKLEGDEGLAKVKIQVG 220
Query: 222 KAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYG 281
K ++P LA + A ++ G E E K+DG R+Q+HKNG+++ +SR + ++
Sbjct: 221 KPIKPMLAQMAANVREALVEMGG-EAEFEIKYDGARVQVHKNGNKVLIYSRRLENVTKSI 279
Query: 282 HAMSKIIEQNVLVDRCILDGEML-VWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFA 340
+ + +++ + ++ I++GE++ V +T R ++ + K + + L
Sbjct: 280 PEVVERVKEALKPEKVIVEGELVAVEETGRPRPFQYVLRRFRRKYNIEEMIEKIPLELNL 339
Query: 341 FDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAH 400
FD+LYV ++I ER ++L+ VV N ++ +L+
Sbjct: 340 FDILYVDGQNMIDTPFMERRKVLESVVNS--------------NEWIKS----AENLITK 381
Query: 401 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGY 460
+ +E E F+ + ++ EG++ K L S +EPG+R KWLK+KP +LD++++G
Sbjct: 382 SPEEAEAFYHKALDLGHEGLMAKRLDSTYEPGNRGKKWLKIKPTM----ENLDLVVLGAE 437
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
+G GRR G ++ FL+ A D F+ +VG+G +DE+L LKP +K
Sbjct: 438 WGEGRRSGVLSSFLLG-----AYDPVKGDFVPVGKVGSGFTDEDLVEFTKMLKPLIKK-- 490
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDR 580
+ KE +E K +I +I+ +S + + ++LRFPR
Sbjct: 491 -------------EHGKE-----VELEPKVVIEVAYQEIQ--KSPKYESGFALRFPRYIA 530
Query: 581 VRYDKPWHDCLDVQSFVEL 599
+R DK D VQ EL
Sbjct: 531 LREDKGPEDADTVQRLAEL 549
>gi|223478331|ref|YP_002582768.1| ATP-dependent DNA ligase [Thermococcus sp. AM4]
gi|214033557|gb|EEB74384.1| ATP-dependent DNA ligase [Thermococcus sp. AM4]
Length = 562
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 134/506 (26%), Positives = 231/506 (45%), Gaps = 65/506 (12%)
Query: 108 VAAEVLQRRQ-GMISGGLTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNAQEMKW 163
VA + +R+Q S LTIK + + ++A + K+ L+ L +E K+
Sbjct: 97 VALALKKRKQKSFFSQPLTIKRVYNTFVKVAEASGEGSQDRKMKYLANLFMDATPEEGKY 156
Query: 164 IIMIILKDLKLGISE----KSIFHEFH--PD-AEDLFNVTCDLKLVCEKLK-DRNQRHKR 215
+ +L ++ G++E +I F P+ E + +T D V K + N+ +
Sbjct: 157 LARTVLGTMRTGVAEGILRDAIAEAFKVKPELVERAYMLTSDFGYVTRVAKLEGNEGLSK 216
Query: 216 QDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFL 275
I++GK +RP LA + A ++ G E E K+DG R+Q+H++G + +SR
Sbjct: 217 VSIQIGKPIRPMLAQNAANVKEALIEMGG-EAAFEIKYDGARVQVHRDGDRVIIYSRRLE 275
Query: 276 DHSEYGHAMSKIIEQNVLVDRCILDGEML-VWDTSLNRFAEFGSNQEIAKAARDGLSSDR 334
+ + + + ++ ++ + I++GE++ V + R ++ + K + +
Sbjct: 276 NVTRSIPEIVEAVKASLRPSKVIVEGELVAVGENGRPRPFQYVLRRFRRKYNIEEMIEKI 335
Query: 335 QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPS-KGRLETLVPDHGLNSHVRPQGEP 393
L FD+LYV S+I ER + L++ V+ S K +L
Sbjct: 336 PLELNLFDILYVEGESLIDTKFAERRKKLEESVEESDKIKL------------------- 376
Query: 394 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLD 453
LV VDE E+F+K +E EG++ K L S +EPG+R KWLK+KP +LD
Sbjct: 377 AEQLVTKKVDEAEEFYKRALELGHEGLMAKRLDSVYEPGNRGKKWLKIKPTM----ENLD 432
Query: 454 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 513
++IIG +G GRR + FLVA A D F+ +VG+G +DE+L LK
Sbjct: 433 LVIIGAEWGEGRRAHLLGSFLVA-----AYDPESGEFVPVGKVGSGFTDEDLIEFTKMLK 487
Query: 514 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSL 573
P + E F ++ +P V IE + I +S + + ++L
Sbjct: 488 PLIVREE------GKFVEI------QPKVVIEVTYQEI----------QKSPKYKSGFAL 525
Query: 574 RFPRIDRVRYDKPWHDCLDVQSFVEL 599
RFPR +R DK + ++ +L
Sbjct: 526 RFPRYVALREDKSPEEADTIERVAQL 551
>gi|339246701|ref|XP_003374984.1| DNA ligase 1 [Trichinella spiralis]
gi|316971746|gb|EFV55486.1| DNA ligase 1 [Trichinella spiralis]
Length = 825
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 137/527 (25%), Positives = 229/527 (43%), Gaps = 102/527 (19%)
Query: 136 LASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF----HEF------ 185
L+ S + +K+ ++ L+ E +++I + +++G++E+S+ H F
Sbjct: 316 LSGSSSMNKKLEMVKGLLVSCRDCEARYLIRCLSGKMRIGLAEQSLLVALAHAFAFIERK 375
Query: 186 -------HPDAEDLFNVTCDLKLVCEKLKDRNQ------RH------KRQDIEVGKAVRP 226
DA + C L + + D + RH + I G ++P
Sbjct: 376 KENKKKLRDDALKEYLDECALIMKTAECPDYGKIVDIALRHGLHALPEHCHITPGIPLKP 435
Query: 227 QLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSK 286
LA ++ E E K+DG+R QIH + FSR+ +H+ + +
Sbjct: 436 MLAFPSKGIEEVLKRFGSAEFACEWKYDGERAQIHFYDGTVKVFSRNQENHTGKYPDIVE 495
Query: 287 II-----------EQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR-DGLSSDR 334
+I Q + CI+D E++ WDT F Q ++ R D S D
Sbjct: 496 LIPKVLSATNNKNNQTDPISSCIIDSEIVAWDTENQSILPF---QVLSTRKRKDAESGDV 552
Query: 335 Q--LCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGE 392
+ + FAFD+LY+ S+ Q +ER +L+ +++ G H +
Sbjct: 553 KVNVSVFAFDLLYLNGQSLTTQPFRERRSMLRSLIEEMDG--------HFFFTK------ 598
Query: 393 PCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYI-RAG 449
SLV ++ DE+ +F +E ++ EG++LK L + +E RS KWLKLK +Y+ G
Sbjct: 599 ---SLVTNDSDEIGQFLEEAVKGNCEGLMLKTLDKDATYEIAKRSHKWLKLKKDYLDNTG 655
Query: 450 SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV 509
+D+++IGGY G GRR G +L+A P + Y S C++GTG DE+L
Sbjct: 656 DTVDLVVIGGYLGVGRRVGVYGGYLLA-CYNPTTEEYQ----SICKIGTGFKDEDLQ--- 707
Query: 510 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE--------------SPEKSIILSI 555
K +F+++ AP S+Y+ + S PD W + SP+ + I
Sbjct: 708 -KQAEFFKQHII--SAPKSYYRYS--SSIAPDHWFDPVQVWEVKAADLSISPKHFAAIGI 762
Query: 556 TSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
D + I SLRFPR RVR DK D + E+ ++
Sbjct: 763 VDDEKGI---------SLRFPRFIRVRDDKNPEDATTAEEVAEIYYN 800
>gi|431890909|gb|ELK01788.1| DNA ligase 3 [Pteropus alecto]
Length = 909
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 137/498 (27%), Positives = 224/498 (44%), Gaps = 70/498 (14%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E+++ L RL+ E+ L + + A ++K II + D
Sbjct: 285 LTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLDALD------------ 332
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR-----HKRQDIEVGKA----VRPQLAMRIGD 234
P+A + F + +L+ V E++ Q +R+ + V + V+P LA
Sbjct: 333 ---PNAYEAFKASRNLQDVVERVLHNEQEVEKEPGQRRSLSVQASLMTPVQPMLAEACKS 389
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A RK + E K+DG+R+Q+HKNG YFSRS L H + H I +
Sbjct: 390 IEYAIRKCPNG-MFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPH-KVAHFKDYIPQAF 447
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + FG+ KAA D +C F FD +Y D S+
Sbjct: 448 PGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAA----FQDANVCLFVFDCIYFNDVSL 503
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + +P+ + S ++ + V+ VD + + +E
Sbjct: 504 MDRPLCERRKFLHDNM--------VEIPNRIMFSEMKQVTK-----VSDLVDMINRVIRE 550
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGG 468
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G +GG
Sbjct: 551 GL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGG 604
Query: 469 EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP-- 526
++ FL+ Y +C V T S DA + +L+ + K
Sbjct: 605 MMSIFLMG--------CYDPSSQKWCTV-TKCSGGHDDATLARLQKELDMVKISKDPSKI 655
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDK 585
PS+ ++ N PD + P+K+ + IT +SE +A S+RFPR R+R+DK
Sbjct: 656 PSWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSKSEAHTADGISIRFPRCTRIRHDK 712
Query: 586 PWHDCLDVQSFVELVHSS 603
W ++ EL S
Sbjct: 713 DWKSATNLPKLKELYQLS 730
>gi|395334355|gb|EJF66731.1| ATP-dependent DNA ligase [Dichomitus squalens LYAD-421 SS1]
Length = 834
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 135/514 (26%), Positives = 231/514 (44%), Gaps = 96/514 (18%)
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
SS+N+ K+S+++ L+ QE K+II + L++G +E+++ A +
Sbjct: 340 SSQNK--KVSIITKLLASCQGQEAKYIIRSLEGKLRIGNAERTVLVALAHAAVLAEQESA 397
Query: 198 DLKLVCEKLKDRNQR------------------------------HKRQDIEVGKAVRPQ 227
+ +L EKL R + ++ + G ++P
Sbjct: 398 NKRLNTEKLAARLEEAAGIIKQVYSELPNYDLVIPALLNAGIDGLKEKCKLSPGVPLKPM 457
Query: 228 LAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK--NGSEIHYFSRSFLDHSEYGHAMS 285
LA K GK+ E K+DG+R Q+HK +G+ I FSR+ D S+
Sbjct: 458 LAKPTKAIGEVLDKFEGKKFTCEYKYDGERAQVHKLADGT-IAVFSRNSEDMSK---KYP 513
Query: 286 KIIEQNVLVDRCILDG-EMLVWDTSLNRF----AEFGSNQEIAKAARDGLSSDR---QLC 337
++EQ + RC+ +G E V+D A+ QE+++ R + + ++C
Sbjct: 514 DLMEQ---LPRCVKEGTETFVFDAEAVAIDKDTAKLLPFQELSRRKRKDVKVEDIKVRVC 570
Query: 338 YFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSL 397
FAFD+LY+ ++ + ER LLQ+ +P V + + +
Sbjct: 571 LFAFDLLYLNGEPLLQKDFAERRALLQEHFQP-----------------VEHEFQFAKAS 613
Query: 398 VAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLD 453
A VDE++ F +E++++ EG+++K L S ++P R+ WLKLK +Y+ G LD
Sbjct: 614 DAETVDEIQTFLEESVKDGCEGLMVKMLEGEFSHYQPSRRTVNWLKLKKDYLAGVGDSLD 673
Query: 454 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 513
++++GGY+G G+R FL+A D + + C++GTG SDE L A LK
Sbjct: 674 LVVVGGYFGKGKRTNVYGAFLLACY-----DADAEEYQTICKIGTGFSDEALQAHYETLK 728
Query: 514 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP--- 570
P AP ++ +PDVW E K + +T+D+ S +++A
Sbjct: 729 P------LEVHAPRGDIKIGG---AKPDVWFEP--KVVWEVLTADLSL--SPIYTAAQGL 775
Query: 571 -----YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
SLRFPR ++R DK D + E+
Sbjct: 776 VEERGISLRFPRFIKIREDKDADDATGPEQIAEM 809
>gi|317033374|ref|XP_001395539.2| DNA ligase Cdc9 [Aspergillus niger CBS 513.88]
Length = 894
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 134/528 (25%), Positives = 225/528 (42%), Gaps = 93/528 (17%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH------PDAEDLFNVTCDL 199
K E K+I+ + L+LG++EK++ HE P AE L L
Sbjct: 394 KGGPSEAKYIVRFLEGKLRLGLAEKTVLVALAQAVVAHEAAMEGHKTPSAEKLAEGEAIL 453
Query: 200 KLVCEKLK------------DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEV 247
K V +L + K ++ G ++P LA + GKE
Sbjct: 454 KTVYSELPAYEVIIPAILEHGLSNLPKVCKLQPGIPLKPMLAKPTKSITEVLDRFEGKEF 513
Query: 248 VIECKFDGDRIQIHKNGSE-IHYFSRSFLDHSEYGHAMSKIIEQN----------VL--- 293
E K+DG+R QIH + IH + + + +S I +N VL
Sbjct: 514 TCEYKYDGERAQIHYVAPDSIHQYPGATATLKKDAKGLSAIFSRNSEDLSKKYPDVLAKL 573
Query: 294 -------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVL 344
V +LD E + WDT + F Q + + +D + D ++ C FAFD+L
Sbjct: 574 DGWIKEGVQSFVLDCETVAWDTENKKVLPF--QQLMTRKRKDVKAEDVKVKVCIFAFDLL 631
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
++ + +SL+ER ELL + + ++G + +G N++V +DE
Sbjct: 632 FLNGEPTVKKSLRERRELLHESFQVTEGEFQ--FAQYG-NTNV--------------LDE 674
Query: 405 VEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 460
++ ++++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G Y
Sbjct: 675 IQTLLDDSVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVLGAY 734
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
+G G+R FL+A A ++ + + + C +GTG S+ L+ L P +
Sbjct: 735 HGRGKRTSVYGAFLLA-----AYNSSTQTYETICNIGTGFSEAVLEEFYNALSPL--TID 787
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP-----Y 571
PK FY +N K++PDVW E K+ L+++ + E
Sbjct: 788 RPK----PFYSHSNVPKDQPDVWFEPRLVWEVKTADLTLSPRYKAAADEFMGTTGGGKGV 843
Query: 572 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
SLRFPR + R DK ++ E+ ++ GG+ DD
Sbjct: 844 SLRFPRFIKSRDDKKPEQATTTRAVAEMYRKQEAVQKENAGKGGVDDD 891
>gi|281203965|gb|EFA78161.1| BRCT domain-containing protein [Polysphondylium pallidum PN500]
Length = 1017
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 136/508 (26%), Positives = 239/508 (47%), Gaps = 55/508 (10%)
Query: 101 NAGNFPMVAAEVLQRRQGM-ISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQ 159
+ G+ A + QR++ + LT+ ++++ LD L + +++ +S +KK A
Sbjct: 85 DKGDVTETAYKFYQRQENIPTKSTLTLGQVDEFLDVLTTISKFDDQVKAISKFLKKCTAF 144
Query: 160 EMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLK----DRNQRHKR 215
+ + + II DLK+ + K HP+A D + +L+ V + +K D+
Sbjct: 145 DWRLVNRIIDSDLKINMGAKYFLEALHPEAMDAYRKANNLRAVIDTIKSGGFDKKSAGDG 204
Query: 216 QDIEVGK---------AVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSE 266
+++G ++P L + A A G E K+DG+RIQIHK G++
Sbjct: 205 SAMKMGSLGISLKLMTPIKPMLPKALKSADAVISAC-GPLFYAEIKYDGERIQIHKQGND 263
Query: 267 IHYFSRSFLDHSEYG-HAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA 325
FSR+ + + I + D ILDGE+L+ DT ++ FG+ +
Sbjct: 264 YFCFSRNLKPVQSWKVEQVKPYIPKATKADSIILDGEILLMDTKTSKPLPFGT---LGIH 320
Query: 326 ARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNS 385
++G +D +C F FD+LY+ S+I + +R E+L+ V + R+E
Sbjct: 321 KKNGF-TDATVCVFLFDILYLNGKSLIDLPISKRREILESNVNVVQHRVELSEITEIAGK 379
Query: 386 HVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEY 445
+P+ LVA T + + EG+V+KD S +EPG R W+K+K +Y
Sbjct: 380 EDKPK------LVA--------LLNRTFKEKLEGLVIKDSTSVYEPGCRH--WIKVKKDY 423
Query: 446 IRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ +D D+L IGGYYG+G GG V FL+ D + + C+V GL
Sbjct: 424 LAGMADSADLLAIGGYYGTGTSGGLVTVFLMCCY-----DEETETYKTVCKVSGGLD--- 475
Query: 505 LDAVVTKLKPYFRK-----YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI 559
DA + KL+P + + + PP + + PD ++ P+++++ + S
Sbjct: 476 -DAAIGKLQPIVKNSMIKISKDSTKVPPWLDILKAYT---PDFIVKDPKEAMVFEVESAE 531
Query: 560 RTIRSEVFSAPYSLRFPRIDRVRYDKPW 587
T ++ ++ +S+RFPRI ++R DK W
Sbjct: 532 LT-GTKHHTSGFSMRFPRIVKIRKDKDW 558
>gi|337283857|ref|YP_004623331.1| ATP-dependent DNA ligase [Pyrococcus yayanosii CH1]
gi|334899791|gb|AEH24059.1| ATP-dependent DNA ligase [Pyrococcus yayanosii CH1]
Length = 588
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 135/513 (26%), Positives = 238/513 (46%), Gaps = 79/513 (15%)
Query: 108 VAAEVLQRRQ-GMISGGLTIKELNDLLDRLA--SSE-NRAEKISVLSTLIKKTNAQEMKW 163
VA + +R+Q S LTIK + D L ++A S E ++ +K+ L+ L E K+
Sbjct: 121 VALAIKKRKQRSFFSQPLTIKRVYDTLVKVAEISGEGSQDKKLKYLANLFMDAEPIEAKY 180
Query: 164 IIMIILKDLKLGISE----KSIFHEFHPDAEDL---FNVTCDLKLVCEKLK-DRNQRHKR 215
+ IL ++ G++E +I FH E + + +T D V + K + N+ +
Sbjct: 181 LARTILGIMRTGVAEGILRDAIAEAFHVKVELVERAYMLTSDFGFVTKVAKLEGNEGLAK 240
Query: 216 QDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFL 275
I+VGK ++P LA + A ++ G E E K+DG R+Q+HK+G I +SR
Sbjct: 241 VTIQVGKPIKPMLAQQAASIKDALLEMGG-EAEFEIKYDGARVQVHKDGDRIIVYSRRLE 299
Query: 276 DHSEYGHAMSKIIEQNVLVDRCILDGEM---------LVWDTSLNRFAEFGSNQEIAKAA 326
+ + + + +++ + ++ I++GE+ L + L RF + +E+ +
Sbjct: 300 NVTRSIPEVVERLKRAIKAEKAIVEGELVAVGEDGRPLPFQYVLRRFRRKYNIEEMIEKI 359
Query: 327 RDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSH 386
L FDVLYVG ++I + ER + L+ +++ + G ++
Sbjct: 360 --------PLELNLFDVLYVGGKALIDEPFIERRKTLEGIIE-ADGWIKV---------- 400
Query: 387 VRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI 446
+L+ +V+E E F+++ + EG++ K L S +EPG+R KWLK+KP
Sbjct: 401 -------AENLITKSVEEAESFYRKALGMGHEGLMAKRLDSVYEPGNRGKKWLKIKPTM- 452
Query: 447 RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 506
+LD++IIG +G GRR F++ A D + F+ +VG+G +DE+L
Sbjct: 453 ---ENLDLVIIGAEWGEGRRAHVFGSFILG-----AYDPHTGEFVEVGKVGSGFTDEDLI 504
Query: 507 AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEV 566
LK K E + VW E K +I +I+ +S
Sbjct: 505 EFTKMLKRLITKEEGKR------------------VWFEP--KVVIEVTYQEIQ--KSPK 542
Query: 567 FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+ + ++LRFPR +R DK D ++ +L
Sbjct: 543 YRSGFALRFPRYVALRDDKGPEDADTIERIAQL 575
>gi|68070421|ref|XP_677122.1| DNA ligase 1 [Plasmodium berghei strain ANKA]
gi|56497113|emb|CAH97995.1| DNA ligase 1, putative [Plasmodium berghei]
Length = 897
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 193/407 (47%), Gaps = 43/407 (10%)
Query: 208 DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSE 266
D N K+ ++ G V+P LA + + E K+DG+R QIH +
Sbjct: 503 DMNVLMKKCTVKTGVPVQPMLAKPTKGIQEVLDRFNNVTFTCEYKYDGERAQIHYIDKDN 562
Query: 267 IHYFSRSFLDHSEYGHAMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAK 324
I FSR+ +E + +I++ ++ V I+D E++ +D + F +
Sbjct: 563 IKIFSRNLETMTEKYPDVIQIVKDQIMPGVTESIIDSEVVAYDIENKKILPFQILTTRKR 622
Query: 325 AARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLN 384
D + ++C F FD++ VI + L+ R +LL ++K +G LE + +
Sbjct: 623 KDVDIENIKVKICLFPFDLICCNGIPVIKEPLEIRRKLLYSLLKCKEGVLE-----YATH 677
Query: 385 SHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLK 442
S + +N+D+++ F ++ IEN EG+++K L + +EP RS WLK+K
Sbjct: 678 SEM------------NNIDDIDIFLQDAIENNCEGLMVKTLLDNASYEPSRRSLNWLKVK 725
Query: 443 PEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLS 501
+YI SD +D++ I GYYG G+R G F++A A ++ F + C+ GTG S
Sbjct: 726 KDYIEGLSDSVDLVPIAGYYGKGKRSGVYGAFVLA-----AYNSETENFQTVCKAGTGFS 780
Query: 502 DEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITS 557
DE L+A+ L P + S+Y+V++ K PDVW ++ K+ LS+ S
Sbjct: 781 DEILNALHESLSDKI----IPNKK--SYYEVSD--KLNPDVWFDAHYVWEIKAADLSL-S 831
Query: 558 DIRTIRSEVFS--APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
+ T V+S LRFPR R+R DK Q VE +
Sbjct: 832 PVHTAAIGVYSDDKGIGLRFPRFLRLRDDKNPEQATTAQQIVEFYEA 878
>gi|358058971|dbj|GAA95369.1| hypothetical protein E5Q_02023.4 [Mixia osmundae IAM 14324]
Length = 871
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 170/672 (25%), Positives = 289/672 (43%), Gaps = 137/672 (20%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV------DYFSALRLILPSL--DRERGSY 63
LV F I+ T KR + FL Y +V D + L + L D E
Sbjct: 256 LVKTFQLIEGTS----KRLEISAFLSAYLLAVIQRSPEDLTRVVYLCINRLCPDYEGLEL 311
Query: 64 GLKESVLANCLIDALG--MSKDSADAVRLINWRKGGAAPNAGNFPMVA-----AEVLQRR 116
G+ E +L + +A G +++ AD V+ G+ +VA + +
Sbjct: 312 GIGEGLLQKAIAEATGRGLAQVKADYVK------------TGDLGLVAQSSRKVQPTMFK 359
Query: 117 QGMISGGLTIKELNDLLDRLASSEN-RAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLG 175
Q + + K L D+ AS +N +A+K ++ L+ E K++I + L++G
Sbjct: 360 QKPLDVRVVFKNLKDIA--AASGQNSQAKKTGIIKKLLAGCEGSEAKFVIRSLEGKLRIG 417
Query: 176 ISEKSIF---------HEFHPDAEDLFNVTCD---------LKLVCEKL----------- 206
++E+++ HE + + + +K V +L
Sbjct: 418 LAERTVLIALATAVVRHEIEQSGKKISQAALEQRIEAGQDMIKQVFSELPSYDKIVPALL 477
Query: 207 -KDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KN 263
+ ++ H + G ++P LA + G++ E K+DG+R Q+H ++
Sbjct: 478 EQGIDKLHDVCALTAGIPLKPMLAKPTKAITEVLDRFEGQDFTCEYKYDGERAQVHMLED 537
Query: 264 GSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCI--------LDGEMLVWDTSLNRFAE 315
GS I FSR+ D S ++EQ + RCI +D E W R
Sbjct: 538 GS-IKVFSRNSEDMS---IKYPDLVEQ---LPRCIKPSVKSFVIDAECTAWSKDEKRLLP 590
Query: 316 FGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKG 372
F QE++K R G+ + ++ FAFD+LY+ +++ L R +LL++ P
Sbjct: 591 F---QELSKRKRKGVKIEDVTVRVKLFAFDLLYLNGETLLKTDLDSRRKLLREHFSP--- 644
Query: 373 RLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKW 429
V + + S A +V+ ++ F E+I+ EG+++K L G+ +
Sbjct: 645 --------------VANEFDFATSADASDVEHIQAFLDESIKQGCEGLMVKMLHGQGAYY 690
Query: 430 EPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPR 488
EP RS WLK+K +Y++ G D+ +IGGY+G G+R FL+A + PD+
Sbjct: 691 EPSRRSMNWLKVKKDYLQGVGDSFDLTVIGGYHGRGKRTAVYGAFLLACYD---PDS--E 745
Query: 489 RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE 548
+ + C++GTG S+E LD+ T LKP +E KR +Y+V + PDV+ E
Sbjct: 746 SYQAVCKLGTGFSEEALDSHYTVLKP----HECGKRG---YYEVGTAT---PDVYFEP-- 793
Query: 549 KSIILSITSDIRTIRSEVFSAP---------YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+ + + +D+ S V++A SLRFPR R+R DK D F+
Sbjct: 794 RVVWEVLAADLSL--SPVYTAAREQLGGERGVSLRFPRFIRIRDDKGVEDS-TTPEFIAE 850
Query: 600 VHSSNGTTQKGK 611
+ T GK
Sbjct: 851 AYQRQAVTVNGK 862
>gi|255941662|ref|XP_002561600.1| Pc16g13010 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586223|emb|CAP93971.1| Pc16g13010 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 906
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 137/528 (25%), Positives = 225/528 (42%), Gaps = 93/528 (17%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH------PDAEDLFNVTCDL 199
K E K+I+ + L+LG++EK++ HE P AE++
Sbjct: 406 KGGPSEAKYIVRFLEGKLRLGLAEKTVLVAVSRAVQTHEAELAGNKIPSAEEMAAGENIF 465
Query: 200 KLVCEKLKDRN------------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEV 247
K V +L + + + G ++P LA + GKE
Sbjct: 466 KSVYSELPAYEVIIPAVLEHGLFKLPEVCKLSPGIPIKPMLAKPTKSITEVLDRFEGKEF 525
Query: 248 VIECKFDGDRIQIH-KNGSEIHYFSRSFLDHSEYGHAMSKIIEQN----------VL--- 293
E K+DG+R QIH + IH + + + +S I +N VL
Sbjct: 526 TCEYKYDGERAQIHFVSPDSIHQYPGAVNTLQKDSKGLSSIFSRNSEDLSKKYPDVLGKL 585
Query: 294 -------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVL 344
V +LD E + WDT + F Q + + +D + D ++ C +AFD+L
Sbjct: 586 DTWVKPDVKSFVLDCETVAWDTEAKKVLPF--QQLMTRKRKDVKAEDVKVKVCVYAFDLL 643
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
+ + +SL+ER EL+ K +P +G + +G NS V +DE
Sbjct: 644 FFNGEPCVKKSLRERRELMHKCFQPVEGEFQ--FAQYG-NSSV--------------LDE 686
Query: 405 VEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 460
+++ + +++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G Y
Sbjct: 687 IQELLEASVKASCEGLMVKMLDTAESGYEPSMRSRNWLKVKKDYLAGVGDSLDLVVLGAY 746
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
YG G+R FL+A A P+ DTY + C +GTG S+ L+ + L P +
Sbjct: 747 YGRGKRTSVYGAFLLA-AYNPSNDTYE----TICNIGTGFSEVLLEELHQTLVPLV--ID 799
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP-----Y 571
PK FY + K++PDVW E K+ L+++ + E
Sbjct: 800 RPK----PFYTHSTVPKDQPDVWFEPRLVWEVKTADLTLSPRYQAAADEFQGTTGGGKGV 855
Query: 572 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
SLRFPR + R DK + ++ E+ T+ GG+ DD
Sbjct: 856 SLRFPRYIKSRDDKKPDEATTTRAVAEMYRKQEAVTKDTTSKGGVDDD 903
>gi|18978007|ref|NP_579364.1| ATP-dependent DNA ligase [Pyrococcus furiosus DSM 3638]
gi|397652716|ref|YP_006493297.1| ATP-dependent DNA ligase [Pyrococcus furiosus COM1]
gi|6225279|sp|P56709.1|DNLI_PYRFU RecName: Full=DNA ligase; AltName: Full=Pfu DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
gi|18893788|gb|AAL81759.1| DNA ligase (lig) [Pyrococcus furiosus DSM 3638]
gi|393190307|gb|AFN05005.1| ATP-dependent DNA ligase [Pyrococcus furiosus COM1]
Length = 561
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 227/496 (45%), Gaps = 78/496 (15%)
Query: 124 LTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE-- 178
LTIK + L ++A + +K+ L+ L E K++ IL ++ G++E
Sbjct: 111 LTIKRVYQTLVKVAETTGEGSQDKKVKYLADLFMDAEPLEAKYLARTILGTMRTGVAEGL 170
Query: 179 --KSIFHEFHPDAEDL---FNVTCDLKLVCEKLK-DRNQRHKRQDIEVGKAVRPQLAMRI 232
+I FH E + + +T D V + K + N+ + +++GK ++P LA +
Sbjct: 171 LRDAIAMAFHVKVELVERAYMLTSDFGYVAKIAKLEGNEGLAKVQVQLGKPIKPMLAQQA 230
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNV 292
A ++ G E E K+DG R+Q+HK+GS+I +SR + + + + +++ +
Sbjct: 231 ASIRDALLEMGG-EAEFEIKYDGARVQVHKDGSKIIVYSRRLENVTRAIPEIVEALKEAI 289
Query: 293 LVDRCILDGEM---------LVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDV 343
+ ++ I++GE+ L + L RF + +E+ + L+ FDV
Sbjct: 290 IPEKAIVEGELVAIGENGRPLPFQYVLRRFRRKHNIEEMMEKIPLELN--------LFDV 341
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
LYV S+I +R L++++K N ++ +L+ V+
Sbjct: 342 LYVDGQSLIDTKFIDRRRTLEEIIKQ--------------NEKIKV----AENLITKKVE 383
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGS 463
E E F+K +E EG++ K L + +EPG+R KWLK+KP +LD++IIG +G
Sbjct: 384 EAEAFYKRALEMGHEGLMAKRLDAVYEPGNRGKKWLKIKPTM----ENLDLVIIGAEWGE 439
Query: 464 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
GRR F++ A D F+ +VG+G +D++L LKP K E +
Sbjct: 440 GRRAHLFGSFILG-----AYDPETGEFLEVGKVGSGFTDDDLVEFTKMLKPLIIKEEGKR 494
Query: 524 RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 583
VW++ K +I +I+ +S + + ++LRFPR +R
Sbjct: 495 ------------------VWLQP--KVVIEVTYQEIQ--KSPKYRSGFALRFPRFVALRD 532
Query: 584 DKPWHDCLDVQSFVEL 599
DK D ++ +L
Sbjct: 533 DKGPEDADTIERIAQL 548
>gi|320583128|gb|EFW97344.1| DNA ligase [Ogataea parapolymorpha DL-1]
Length = 706
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 133/513 (25%), Positives = 229/513 (44%), Gaps = 88/513 (17%)
Query: 137 ASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS---------------- 180
ASS+N+ KI++++ ++ +++E K+++ + L++ +EKS
Sbjct: 224 ASSQNK--KIAMINRMLTSCDSREAKFLMRSLEGTLRIQFAEKSVVVALAKALVEHEMKQ 281
Query: 181 --------IFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRH--KRQDIEVGKAVRPQLAM 230
I E ++ F+ T + +L+ E + ++ G ++P LA
Sbjct: 282 RGQKVTPAILSEAEEQMKEAFSQTPNYELIIETAIKYGTLNLMDHCTLKPGIPLKPMLAK 341
Query: 231 RIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHSEYGHAMSKIIE 289
+ +E E K+DG+R Q+H + +SRS + ++ + ++E
Sbjct: 342 PTKSITEILNQFENQEFSCEYKYDGERAQVHLLPDRTLRVYSRSSENMTQRYPDLIPVME 401
Query: 290 Q----NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFD 342
+ N V ILD E + WD + F Q ++ R + + Q+C FAFD
Sbjct: 402 ELQRLNPEVKSFILDCECVAWDKKQEKILPF---QILSTRKRKDVKEEDITVQVCLFAFD 458
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVK--PSKGRLETLVPDHGLNSHVRPQGEPCWSLVAH 400
+L S++ +SLKER + + +K P K R L +
Sbjct: 459 ILLYNGESLLQKSLKERRQYMYDNLKIIPGKFRFSE-------------------KLDSS 499
Query: 401 NVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 456
++D + KF +++++ EG+++K L S +EP RS WLKLK +Y+ G LD+++
Sbjct: 500 DLDVITKFLDQSVKDSCEGLMIKTLNGTNSLYEPSKRSRNWLKLKKDYLEGVGDSLDLVV 559
Query: 457 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 516
IG Y G G+R G FL+A PD+ F + C++GTG S+E L ++ KLKP
Sbjct: 560 IGAYVGKGKRTGGYGGFLLASYN---PDS--GEFEAICKIGTGFSEEMLASLFEKLKP-- 612
Query: 517 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY----- 571
+ + PK SF N + PD+W E ++ +D S ++ Y
Sbjct: 613 TQLDKPK---ASFVYDKTNPRAAPDIWFEP--TTLFEVKVADF--TESPLYKCGYSYLGD 665
Query: 572 -----SLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
SLRFPR R+R DK D + VE+
Sbjct: 666 GSKGVSLRFPRFVRIRDDKSVEDATTSEQIVEM 698
>gi|396080968|gb|AFN82588.1| DNA ligase [Encephalitozoon romaleae SJ-2008]
Length = 589
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 212/464 (45%), Gaps = 59/464 (12%)
Query: 143 AEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF----HEFHPDAED----LFN 194
+ K ++ ++ K + E K++I ++ LK+G++ K++ + F D D FN
Sbjct: 137 SSKKRIILGMMVKCSPLESKYLIRLVEGRLKIGLALKTVLISLGNVFSSDKVDEIKAAFN 196
Query: 195 VTCDLKLVCEKLKDRNQRHKRQDIEV--GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECK 252
D+ + E + + +V G ++P LA D +A++++ K E K
Sbjct: 197 RQPDIGRLAECILEHGVEKLSTKFQVTPGIPLKPMLANPSKDLTSAFKRVEDKRFACEYK 256
Query: 253 FDGDRIQIHKNGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVLVDRCILDGEMLVWDTSLN 311
+DG+R+QIH+ G+ I FSR+ +E Y M N+ I+DGE++ +D
Sbjct: 257 YDGERVQIHRFGNNIETFSRNSEKTTEKYPDLMDLY---NIADKDFIIDGEIVAYDRKEC 313
Query: 312 RFAEFGSNQEIAKAARDGLSS---DRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVK 368
+ F Q + R + S D +C F FD++Y + I + L+ER +L K
Sbjct: 314 KILPF---QVLTTRKRKRVESSKIDVHVCVFGFDLIYFDGKTYIDELLEERRRVLHNSFK 370
Query: 369 PSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGS- 427
KGR + + + C ++ E FF ++E EG+++K LGS
Sbjct: 371 EMKGRFQF------------AEFKDC-----ETPEDAEAFFNTSVEKGFEGMMVKTLGSD 413
Query: 428 -KWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDT 485
+ P RS KW+K+K +Y+ SD LD++++G YYG G+R G FL+ + +
Sbjct: 414 ATYLPSQRSNKWIKIKKDYLEGMSDSLDLVVMGAYYGKGKRAGFYGGFLLGVY-----ND 468
Query: 486 YPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE 545
+F + C++GTG D L + +L P Y + K PDVW+E
Sbjct: 469 EEEKFEALCKIGTGFDDNILSKLYEQLSSNL-------CGAPKNYSYKESIK--PDVWVE 519
Query: 546 SPE----KSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
+ ++ +S+ S I SLRFPR R R DK
Sbjct: 520 AKYVWEVRAAGMSL-SPIYNAGGSRNGKGISLRFPRFIRERDDK 562
>gi|195122766|ref|XP_002005882.1| GI20719 [Drosophila mojavensis]
gi|193910950|gb|EDW09817.1| GI20719 [Drosophila mojavensis]
Length = 736
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 201/441 (45%), Gaps = 68/441 (15%)
Query: 199 LKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRI 258
LK ++L+DR H G +RP LA + G ++ E K+DG+R
Sbjct: 337 LKYDIKELQDRCPMHP------GMPLRPMLAQPTKGVSEVLERFSGMQITCEWKYDGERA 390
Query: 259 QIHKN-GSEIHYFSRSFLDHS-EYGHAMSK---IIEQNVLVDRCILDGEMLVWDTSLNRF 313
QIH N EI FSR+ +++ +Y +++ +++ N V+ ILD E++ WD +
Sbjct: 391 QIHLNKDGEISIFSRNSENNTPKYPDLIARSKSLVKGN--VETYILDSEIVAWDIERKQI 448
Query: 314 AEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGR 373
F + D Q+C + FD+LY S++ + L ER ++L + + +G
Sbjct: 449 LPFQILTTRKRKNVDIADIKVQVCVYIFDLLYFNGVSLVTKPLSERRKILMEHFQEVEGE 508
Query: 374 LETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEP 431
+ +L ++DEV++F +E+I+ EG+++K L + +E
Sbjct: 509 WQFAT-----------------ALDTTDMDEVQQFLEESIKGNCEGLMVKTLDEEATYEI 551
Query: 432 GDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRF 490
RS WLKLK +Y+ G LD+++IGGY G GRR G FL+A DT +
Sbjct: 552 AKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGIYGGFLLACY-----DTENEEY 606
Query: 491 ISFCRVGTGLSDEELDA--------VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDV 542
S C++GTG +DE+L V++ K YFR Y+ PS PD
Sbjct: 607 QSICKIGTGFTDEDLRQHSEFLSAHVISSAKSYFR-YD------PSL---------EPDA 650
Query: 543 WIESPE----KSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPWHDCLDVQSFV 597
W E + K LS++ R V SLRFPR R+R DK + D V
Sbjct: 651 WFEPVQVWEVKCADLSLSPIHRAAIGAVDPERGISLRFPRFIRIRDDKSPENATDANQ-V 709
Query: 598 ELVHSSNGTTQKGKEYGGLQD 618
L+++S + ++ D
Sbjct: 710 SLMYNSQDQVKNNQKSSDQMD 730
>gi|224487995|sp|A0RWD6.2|DNLI_CENSY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
Length = 589
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 143/536 (26%), Positives = 239/536 (44%), Gaps = 64/536 (11%)
Query: 103 GNFPMVAAEVLQRRQ--GMISGGLTIKELNDLLDRLASSEN-RAE--KISVLSTLIKKTN 157
G+ A+ +L+++ ++ +T++ + D L R+A E R++ K+ +S+L+ +
Sbjct: 88 GDLGRAASSILEQKTQTTFLAEEITVERVYDTLMRIARLEGARSQDMKMRHISSLLNDAS 147
Query: 158 AQEMKWIIMIILKDLKLGISEKSIFHEF----------HPDAEDLFNVTCDLKLVCEKLK 207
++ +I+ +IL L+LGI+E ++ P+ E +NV+ DL V E +
Sbjct: 148 PRDACYILKLILGTLRLGIAENTVMDALAAAFTGSKSNRPELERAYNVSSDLGRVAEAVS 207
Query: 208 DRNQRHKRQ-DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSE 266
R + V +RP LA R+ A K+ G + E K DG+R+Q+H +G
Sbjct: 208 SGGLEAVRGFAVAVFSPIRPMLADRVRSESEALEKM-GAGLAAEYKLDGERVQVHLSGGR 266
Query: 267 IHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAA 326
+ FSRS + + Y + + I + +L+ E + + F F QE+
Sbjct: 267 VELFSRSLENITAYYPDIVERIPGRLRAREAVLEAEAVAVNEETGEFLPF---QELMHRR 323
Query: 327 RDGLSSDRQLCYFA-----FDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
R D+ + + FD+LY+ + S ER LL+ VV + VP
Sbjct: 324 RK-YDIDKAVMRYPITVNFFDILYLDGRDCLGISYSERRALLEGVV--DEDSFARCVP-- 378
Query: 382 GLNSHVRPQGEPCWSLVAHNVDE--VEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWL 439
V+ DE +E + +I EG++LK + + G R G WL
Sbjct: 379 ----------------VSTIPDESALEDSLENSINAGCEGLMLKLPDAPYRAGSRGGYWL 422
Query: 440 KLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
KLK EY G LD++IIG ++G GRR G L+A + + DT+P S C+VGT
Sbjct: 423 KLKREYRNELGDSLDLVIIGAFFGKGRRTGRYGTLLLATYD-DSRDTFP----SICKVGT 477
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSIT-- 556
G +DE+LD + L P KR P + + P+V +E I LS
Sbjct: 478 GFTDEDLDQLYQLLSPRVTL----KRNPRIDSGMEADVWFDPEVVMEVVASEITLSPVHK 533
Query: 557 SDIRTIRSEVFSAPYSLRFPRID-RVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 611
+ + ++R A +LRFP+ ++R +K D Q + L S G+
Sbjct: 534 TALDSVRK---GAGLALRFPKFTGKLRTEKTAEDASTDQEVIALYKSQKKVVPDGQ 586
>gi|358058970|dbj|GAA95368.1| hypothetical protein E5Q_02023.3 [Mixia osmundae IAM 14324]
Length = 1044
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 170/672 (25%), Positives = 289/672 (43%), Gaps = 137/672 (20%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV------DYFSALRLILPSL--DRERGSY 63
LV F I+ T KR + FL Y +V D + L + L D E
Sbjct: 429 LVKTFQLIEGTS----KRLEISAFLSAYLLAVIQRSPEDLTRVVYLCINRLCPDYEGLEL 484
Query: 64 GLKESVLANCLIDALG--MSKDSADAVRLINWRKGGAAPNAGNFPMVA-----AEVLQRR 116
G+ E +L + +A G +++ AD V+ G+ +VA + +
Sbjct: 485 GIGEGLLQKAIAEATGRGLAQVKADYVK------------TGDLGLVAQSSRKVQPTMFK 532
Query: 117 QGMISGGLTIKELNDLLDRLASSEN-RAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLG 175
Q + + K L D+ AS +N +A+K ++ L+ E K++I + L++G
Sbjct: 533 QKPLDVRVVFKNLKDIA--AASGQNSQAKKTGIIKKLLAGCEGSEAKFVIRSLEGKLRIG 590
Query: 176 ISEKSIF---------HEFHPDAEDLFNVTCD---------LKLVCEKL----------- 206
++E+++ HE + + + +K V +L
Sbjct: 591 LAERTVLIALATAVVRHEIEQSGKKISQAALEQRIEAGQDMIKQVFSELPSYDKIVPALL 650
Query: 207 -KDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KN 263
+ ++ H + G ++P LA + G++ E K+DG+R Q+H ++
Sbjct: 651 EQGIDKLHDVCALTAGIPLKPMLAKPTKAITEVLDRFEGQDFTCEYKYDGERAQVHMLED 710
Query: 264 GSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCI--------LDGEMLVWDTSLNRFAE 315
GS I FSR+ D S ++EQ + RCI +D E W R
Sbjct: 711 GS-IKVFSRNSEDMS---IKYPDLVEQ---LPRCIKPSVKSFVIDAECTAWSKDEKRLLP 763
Query: 316 FGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKG 372
F QE++K R G+ + ++ FAFD+LY+ +++ L R +LL++ P
Sbjct: 764 F---QELSKRKRKGVKIEDVTVRVKLFAFDLLYLNGETLLKTDLDSRRKLLREHFSP--- 817
Query: 373 RLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKW 429
V + + S A +V+ ++ F E+I+ EG+++K L G+ +
Sbjct: 818 --------------VANEFDFATSADASDVEHIQAFLDESIKQGCEGLMVKMLHGQGAYY 863
Query: 430 EPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPR 488
EP RS WLK+K +Y++ G D+ +IGGY+G G+R FL+A + PD+
Sbjct: 864 EPSRRSMNWLKVKKDYLQGVGDSFDLTVIGGYHGRGKRTAVYGAFLLACYD---PDS--E 918
Query: 489 RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE 548
+ + C++GTG S+E LD+ T LKP +E KR +Y+V + PDV+ E
Sbjct: 919 SYQAVCKLGTGFSEEALDSHYTVLKP----HECGKRG---YYEVGTAT---PDVYFEP-- 966
Query: 549 KSIILSITSDIRTIRSEVFSAP---------YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+ + + +D+ S V++A SLRFPR R+R DK D F+
Sbjct: 967 RVVWEVLAADLSL--SPVYTAAREQLGGERGVSLRFPRFIRIRDDKGVEDS-TTPEFIAE 1023
Query: 600 VHSSNGTTQKGK 611
+ T GK
Sbjct: 1024 AYQRQAVTVNGK 1035
>gi|118576214|ref|YP_875957.1| ATP-dependent DNA ligase [Cenarchaeum symbiosum A]
gi|118194735|gb|ABK77653.1| ATP-dependent DNA ligase [Cenarchaeum symbiosum A]
Length = 577
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 143/536 (26%), Positives = 239/536 (44%), Gaps = 64/536 (11%)
Query: 103 GNFPMVAAEVLQRRQ--GMISGGLTIKELNDLLDRLASSEN-RAE--KISVLSTLIKKTN 157
G+ A+ +L+++ ++ +T++ + D L R+A E R++ K+ +S+L+ +
Sbjct: 76 GDLGRAASSILEQKTQTTFLAEEITVERVYDTLMRIARLEGARSQDMKMRHISSLLNDAS 135
Query: 158 AQEMKWIIMIILKDLKLGISEKSIFHEF----------HPDAEDLFNVTCDLKLVCEKLK 207
++ +I+ +IL L+LGI+E ++ P+ E +NV+ DL V E +
Sbjct: 136 PRDACYILKLILGTLRLGIAENTVMDALAAAFTGSKSNRPELERAYNVSSDLGRVAEAVS 195
Query: 208 DRNQRHKRQ-DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSE 266
R + V +RP LA R+ A K+ G + E K DG+R+Q+H +G
Sbjct: 196 SGGLEAVRGFAVAVFSPIRPMLADRVRSESEALEKM-GAGLAAEYKLDGERVQVHLSGGR 254
Query: 267 IHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAA 326
+ FSRS + + Y + + I + +L+ E + + F F QE+
Sbjct: 255 VELFSRSLENITAYYPDIVERIPGRLRAREAVLEAEAVAVNEETGEFLPF---QELMHRR 311
Query: 327 RDGLSSDRQLCYFA-----FDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
R D+ + + FD+LY+ + S ER LL+ VV + VP
Sbjct: 312 RK-YDIDKAVMRYPITVNFFDILYLDGRDCLGISYSERRALLEGVV--DEDSFARCVP-- 366
Query: 382 GLNSHVRPQGEPCWSLVAHNVDE--VEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWL 439
V+ DE +E + +I EG++LK + + G R G WL
Sbjct: 367 ----------------VSTIPDESALEDSLENSINAGCEGLMLKLPDAPYRAGSRGGYWL 410
Query: 440 KLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
KLK EY G LD++IIG ++G GRR G L+A + + DT+P S C+VGT
Sbjct: 411 KLKREYRNELGDSLDLVIIGAFFGKGRRTGRYGTLLLATYD-DSRDTFP----SICKVGT 465
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSIT-- 556
G +DE+LD + L P KR P + + P+V +E I LS
Sbjct: 466 GFTDEDLDQLYQLLSPRVTL----KRNPRIDSGMEADVWFDPEVVMEVVASEITLSPVHK 521
Query: 557 SDIRTIRSEVFSAPYSLRFPRID-RVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 611
+ + ++R A +LRFP+ ++R +K D Q + L S G+
Sbjct: 522 TALDSVRK---GAGLALRFPKFTGKLRTEKTAEDASTDQEVIALYKSQKKVVPDGQ 574
>gi|374851947|dbj|BAL54893.1| DNA ligase 1 [uncultured Acidobacteria bacterium]
Length = 582
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 137/506 (27%), Positives = 223/506 (44%), Gaps = 54/506 (10%)
Query: 114 QRRQGMISGGLTIKELNDLLDRLA--SSENRAE-KISVLSTLIKKTNAQEMKWIIMIILK 170
Q+++ G LT+ + L +A + E E KI LS L+ + +E ++I ++
Sbjct: 100 QKKEASARGKLTVLAVYTRLMEIAEQTGEGSVERKIQGLSDLLAEAGPKEARYIARFVMG 159
Query: 171 DLKLGISEKSIF----------HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ-DIE 219
L+LGI + +I P+ E +N+ DL LV L+++ R +
Sbjct: 160 RLRLGIGDPTILDALSKAVAGDRSLRPELERAYNLCSDLGLVARTLREQGLDGIRAFRVR 219
Query: 220 VGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSE 279
VG +R LA R+ A R+L +E K DG R Q+HK G+ + FSR+ +
Sbjct: 220 VGHPIRMALAERLPTAEEIIRRLG--RCAVEVKIDGFRCQVHKQGNTVEIFSRNLERTTP 277
Query: 280 YGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFG-SNQEIAKAARDGLSSDRQLCY 338
+ + + Q V I +GE + + F + Q K ++ + L
Sbjct: 278 MFPDIVEGVRQQVAAREAIFEGEAVAVNEETGEIYPFQVTVQRKRKHGVAEMAREYPLVL 337
Query: 339 FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLV 398
+AFD+LY + + R E L+++++P RL+ ++
Sbjct: 338 YAFDLLYSDGVDYTPEPYERRREALERMIRPGD-RLKL-----------------AEMII 379
Query: 399 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLII 457
+ VE+FF+E+IE EGIV K L + ++ G R W+KLK Y SD LDV++I
Sbjct: 380 TDDPKVVERFFEESIERGLEGIVAKRLDAPYQAGARGFHWIKLKRSYKGELSDTLDVVLI 439
Query: 458 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 517
G ++G G R L+ DT F + ++G+GLS+EE + R
Sbjct: 440 GYFHGRGSRARLGIGALLGAVYDEESDT----FKTIAKIGSGLSEEE----------WVR 485
Query: 518 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS--IT-SDIRTIRSEVFSAPYSLR 574
E R+ S +S PDVW+E +L+ IT S + T Y+LR
Sbjct: 486 IRELLDRSRVSHRPARVDSLIEPDVWVEPRYVVTVLADEITKSPVHTCGKRDDEPGYALR 545
Query: 575 FPR-IDRVRYDKPWHDCLDVQSFVEL 599
FPR + +R DK D V+ +E+
Sbjct: 546 FPRVVGWIREDKRPEDANTVREVLEM 571
>gi|383875391|pdb|3RR5|A Chain A, Dna Ligase From The Archaeon Thermococcus Sp. 1519
Length = 570
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 133/505 (26%), Positives = 230/505 (45%), Gaps = 63/505 (12%)
Query: 108 VAAEVLQRRQ-GMISGGLTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKW 163
VA + +R+Q S LTIK + ++A + K+ L+ L +E K+
Sbjct: 105 VALALKKRKQKSFFSQPLTIKRVYSTFVKVAEASGEGSQDRKMKYLANLFMDAQPEEGKY 164
Query: 164 IIMIILKDLKLGISE----KSIFHEFH--PD-AEDLFNVTCDLKLVCEKLK-DRNQRHKR 215
I +L ++ G++E +I F P+ E + +T D V + K + N+ +
Sbjct: 165 IARTVLGTMRTGVAEGILRDAIAEAFRVKPELVERAYMLTSDFGYVAKVAKLEGNEGLSK 224
Query: 216 QDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFL 275
I++GK +RP LA A ++ G E E K+DG R+Q+H++G + +SR
Sbjct: 225 VSIQIGKPIRPMLAQNAASVKEALIEMGG-EAAFEIKYDGARVQVHRDGDRVIIYSRRLE 283
Query: 276 DHSEYGHAMSKIIEQNVLVDRCILDGEML-VWDTSLNRFAEFGSNQEIAKAARDGLSSDR 334
+ + + + ++ ++ + I++GE++ V + R ++ + K D +
Sbjct: 284 NVTRSIPEIVEAVKASLKPSKVIVEGELVAVGENGRPRPFQYVLRRFRRKYNIDEMIEKI 343
Query: 335 QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPC 394
L FD+LYV S+I ER + L++ V+ S+ + +
Sbjct: 344 PLELNLFDILYVDGESLIDTEFVERRKRLEESVEESE------------------KIKIA 385
Query: 395 WSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDV 454
LV V+E E F+K +E EG++ K L S +EPG+R KWLK+KP +LD+
Sbjct: 386 EQLVTKKVEEAEAFYKRALELGHEGLMAKRLDSVYEPGNRGKKWLKIKPTM----ENLDL 441
Query: 455 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 514
+IIG +G GRR + FLVA + PD+ F+ +VG+G +DE+L LKP
Sbjct: 442 VIIGAEWGEGRRAHLLGSFLVAAYD---PDS--GEFLPVGKVGSGFTDEDLVEFTKMLKP 496
Query: 515 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLR 574
+ E F ++ P V IE + I +S + + ++LR
Sbjct: 497 LILREE------GKFVEI------EPKVVIEVTYQEI----------QKSPKYRSGFALR 534
Query: 575 FPRIDRVRYDKPWHDCLDVQSFVEL 599
FPR +R DK + ++ +L
Sbjct: 535 FPRYVALREDKSPEEADTIERIAQL 559
>gi|149245640|ref|XP_001527297.1| DNA ligase I, mitochondrial precursor [Lodderomyces elongisporus
NRRL YB-4239]
gi|146449691|gb|EDK43947.1| DNA ligase I, mitochondrial precursor [Lodderomyces elongisporus
NRRL YB-4239]
Length = 786
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 186/389 (47%), Gaps = 54/389 (13%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-KNGSEIHYFSRSFLDHSE 279
G ++P LA + ++ E K+DG+R Q+H + ++ +SR+ D S+
Sbjct: 416 GIPLKPMLAKPTKSMSEVLDRFQDEKFTCEYKYDGERAQVHLSSDGQVRIYSRNSEDMSQ 475
Query: 280 -YGHAMSKIIEQNVLVDRC--ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQ- 335
Y +S I E + + ILD E + WD + F Q ++ R ++
Sbjct: 476 RYPDLISIIKEFSKTQEHTSMILDCEAVAWDRVQKKILPF---QVLSTRKRKDVNEKDIT 532
Query: 336 --LCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEP 393
+C FAFD+LY +TS+I +SLKER E++ K + P +G+ + + V
Sbjct: 533 VFICLFAFDILYYNNTSLITKSLKERREIMFKHLTPIEGKFQFATSKDSTSLEV------ 586
Query: 394 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-G 449
+++F +++++ EG+++K L S +EP RS WLKLK +Y+ G
Sbjct: 587 -----------LQQFLDQSVKDSCEGLMVKMLEGTESYYEPSKRSRNWLKLKKDYLEGVG 635
Query: 450 SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV 509
LD+++IG Y G G+R G FL+A + D + C++GTG S+E+L +
Sbjct: 636 DSLDLVVIGAYSGRGKRTGTYGGFLLASYNQDTGD-----LETTCKIGTGFSEEDLAKLY 690
Query: 510 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI-TSDIRTIRSEVFS 568
+L P E PK A F NS PDVW E S++ + T+D+ S ++
Sbjct: 691 ERLHP----TEIPK-AKEYFVYDKTNSNAVPDVWFEP---SVLFEVLTADLSL--SPIYK 740
Query: 569 APY-------SLRFPRIDRVRYDKPWHDC 590
A + SLRFPR R+R DK D
Sbjct: 741 AAHSEYGKGISLRFPRFLRLRDDKDIEDA 769
>gi|240103775|ref|YP_002960084.1| ATP-dependent DNA ligase [Thermococcus gammatolerans EJ3]
gi|239911329|gb|ACS34220.1| ATP-dependent DNA ligase (lig) [Thermococcus gammatolerans EJ3]
Length = 559
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 133/506 (26%), Positives = 229/506 (45%), Gaps = 65/506 (12%)
Query: 108 VAAEVLQRRQ-GMISGGLTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKW 163
VA + +RRQ S LTIK + + ++A + K+ L+ L +E K+
Sbjct: 94 VALALKKRRQKSFFSQPLTIKRVYNTFVKVAEASGEGSQDRKMKYLANLFMDAGPEEGKY 153
Query: 164 IIMIILKDLKLGISE----KSIFHEFHPDAEDL---FNVTCDLKLVCEKLK-DRNQRHKR 215
I +L ++ G++E +I F E + + +T D V + K + N+ +
Sbjct: 154 IARTVLGTMRTGVAEGILRDAIAEAFKVKVELVERAYMLTSDFGYVAKIAKLEGNEGLSK 213
Query: 216 QDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFL 275
I++GK +RP LA A ++ G E E K+DG R+Q+H++G ++ +SR
Sbjct: 214 VSIQIGKPIRPMLAQNAASVKDALIEMGG-EAAFEIKYDGARVQVHRDGDKVIIYSRRLE 272
Query: 276 DHSEYGHAMSKIIEQNVLVDRCILDGEML-VWDTSLNRFAEFGSNQEIAKAARDGLSSDR 334
+ + + + ++ ++ + I++GE++ V + R ++ + K + +
Sbjct: 273 NVTRSIPEIVEAVKASLKPSKVIVEGELVAVGENGRPRPFQYVLRRFRRKYNIEEMIEKI 332
Query: 335 QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPS-KGRLETLVPDHGLNSHVRPQGEP 393
L FD+LYV S+I ER + L++ V+ S K +L
Sbjct: 333 PLELNLFDILYVNGESLIDTKFTERRKRLEESVEESDKIKL------------------- 373
Query: 394 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLD 453
LV VDE E+F+K +E EG++ K L + +EPG+R KWLK+KP +LD
Sbjct: 374 AEQLVTKKVDEAEEFYKRALELGHEGLMAKRLDAIYEPGNRGKKWLKIKPTM----ENLD 429
Query: 454 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 513
++IIG +G GRR + FLV A D F+ +VG+G +DE+L LK
Sbjct: 430 LVIIGAEWGEGRRAHLLGSFLVG-----AYDPESGEFVPVGKVGSGFTDEDLVEFTKMLK 484
Query: 514 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSL 573
P + E F ++ P V IE + I +S + + ++L
Sbjct: 485 PLIIREE------GKFVEI------EPKVVIEVTYQEI----------QKSPKYKSGFAL 522
Query: 574 RFPRIDRVRYDKPWHDCLDVQSFVEL 599
RFPR +R DK + ++ +L
Sbjct: 523 RFPRYVALREDKSPEEADTIERVAQL 548
>gi|408381312|ref|ZP_11178862.1| DNA ligase [Methanobacterium formicicum DSM 3637]
gi|407816577|gb|EKF87139.1| DNA ligase [Methanobacterium formicicum DSM 3637]
Length = 557
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 154/603 (25%), Positives = 268/603 (44%), Gaps = 103/603 (17%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDS------VDYFSALRLILPSLDRERGSYGL 65
LV +++ + T +K FL D AL I P+ E G+
Sbjct: 6 LVEVYHDLDSTTKRLEKTDILANFLAKVGDEEPELLPTVTLMALGRIFPTWSEE--ELGI 63
Query: 66 KESVLANCLIDALGMS-KDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQ--GMISG 122
+L + A+G+S +D + +R + G+ M A E+ Q++ + S
Sbjct: 64 GSKLLMKAISQAVGVSPEDVENRMR-----------DTGDIGMAAEELYQKKSQVTLFSR 112
Query: 123 GLTIKELNDLLDRLAS-SENRAE--KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEK 179
LTI +++ L ++A S NRA+ KI L L+ E K+I +L++L++G+ E
Sbjct: 113 PLTIGKVHRNLVKMAEISGNRAQFKKIDYLMELLSSAAPAEAKYITRTVLEELRVGVGEG 172
Query: 180 SI-------FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ-DIEVGKAVRPQLA-- 229
+I F+ E +T D+ LV E + + R+ ++ GK V+P LA
Sbjct: 173 TIRDAISQAFNIPKEVTERAHMLTNDMGLVAEVARMEGEEGLRKLTLKPGKPVKPMLAQL 232
Query: 230 ---MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSK 286
+R+ W + E K+DG R+QIH++G +I F+R + S +S
Sbjct: 233 SPGIRVSVEEMGW-------AICETKYDGIRVQIHRHGDKIDIFTRRLENISLALPEISD 285
Query: 287 IIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYV 346
IE+++ + I++GE++ ++ + K D + S L + FDVLY
Sbjct: 286 YIEKSLPHEDFIVEGEIIASRDGKPISFQYMLQRVRRKYEIDKMVSKIPLTVYLFDVLYY 345
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
G ++ + L+ER ++L+ +VK G+LE L++ V+ + + + +
Sbjct: 346 GG-PILDEPLQERRKILESIVKVESGKLE-------LSAQVK--------VTPEEIHKAQ 389
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRR 466
F+ +I+ EGI++KD + + PG R K LKLK E LD++++GG YG G+R
Sbjct: 390 DLFERSIKGGHEGIMIKDPHAPYMPGIRGKKMLKLKAE----PETLDLVVVGGTYGKGKR 445
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
+ +L+A+ + + TGL D L + ++P
Sbjct: 446 AHFIGSYLMAIQDE------NNQLKPLAYAATGLDDNTLMELSKMVEPLI---------- 489
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-----YSLRFPRIDRV 581
+T + ++ V IE S+IL I SE+ +P YSLRFP + R+
Sbjct: 490 -----ITKDGRQ---VKIEP---SVILEIAF------SEIVESPESETGYSLRFPVVKRI 532
Query: 582 RYD 584
R D
Sbjct: 533 RND 535
>gi|224590086|gb|ACN59570.1| thermostable ATP-dependent DNA ligase [Thermococcus sp. 1519]
Length = 559
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 133/505 (26%), Positives = 230/505 (45%), Gaps = 63/505 (12%)
Query: 108 VAAEVLQRRQ-GMISGGLTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKW 163
VA + +R+Q S LTIK + ++A + K+ L+ L +E K+
Sbjct: 94 VALALKKRKQKSFFSQPLTIKRVYSTFVKVAEASGEGSQDRKMKYLANLFMDAQPEEGKY 153
Query: 164 IIMIILKDLKLGISE----KSIFHEFH--PD-AEDLFNVTCDLKLVCEKLK-DRNQRHKR 215
I +L ++ G++E +I F P+ E + +T D V + K + N+ +
Sbjct: 154 IARTVLGTMRTGVAEGILRDAIAEAFRVKPELVERAYMLTSDFGYVAKVAKLEGNEGLSK 213
Query: 216 QDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFL 275
I++GK +RP LA A ++ G E E K+DG R+Q+H++G + +SR
Sbjct: 214 VSIQIGKPIRPMLAQNAASVKEALIEMGG-EAAFEIKYDGARVQVHRDGDRVIIYSRRLE 272
Query: 276 DHSEYGHAMSKIIEQNVLVDRCILDGEML-VWDTSLNRFAEFGSNQEIAKAARDGLSSDR 334
+ + + + ++ ++ + I++GE++ V + R ++ + K D +
Sbjct: 273 NVTRSIPEIVEAVKASLKPSKVIVEGELVAVGENGRPRPFQYVLRRFRRKYNIDEMIEKI 332
Query: 335 QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPC 394
L FD+LYV S+I ER + L++ V+ S+ + +
Sbjct: 333 PLELNLFDILYVDGESLIDTEFVERRKRLEESVEESE------------------KIKIA 374
Query: 395 WSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDV 454
LV V+E E F+K +E EG++ K L S +EPG+R KWLK+KP +LD+
Sbjct: 375 EQLVTKKVEEAEAFYKRALELGHEGLMAKRLDSVYEPGNRGKKWLKIKPTM----ENLDL 430
Query: 455 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 514
+IIG +G GRR + FLVA + PD+ F+ +VG+G +DE+L LKP
Sbjct: 431 VIIGAEWGEGRRAHLLGSFLVAAYD---PDS--GEFLPVGKVGSGFTDEDLVEFTKMLKP 485
Query: 515 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLR 574
+ E F ++ P V IE + I +S + + ++LR
Sbjct: 486 LILREE------GKFVEI------EPKVVIEVTYQEI----------QKSPKYRSGFALR 523
Query: 575 FPRIDRVRYDKPWHDCLDVQSFVEL 599
FPR +R DK + ++ +L
Sbjct: 524 FPRYVALREDKSPEEADTIERIAQL 548
>gi|408404830|ref|YP_006862813.1| DNA ligase [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408365426|gb|AFU59156.1| DNA ligase [Candidatus Nitrososphaera gargensis Ga9.2]
Length = 597
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 137/527 (25%), Positives = 237/527 (44%), Gaps = 69/527 (13%)
Query: 103 GNFPMVAAEVLQRRQ--GMISGGLTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTN 157
G+ A E ++ + + S +T++ + DR+A + ++ K+ ++S+L+
Sbjct: 88 GDLGDAAGEAMKSKSQSTLFSEPMTVERVYSTFDRVARTTGPGSQETKLRLISSLLNDAT 147
Query: 158 AQEMKWIIMIILKDLKLGISEKSIFHE----FHPDA------EDLFNVTCDLKLVCEKLK 207
A E ++II ++ L+LGI++ ++ F D E+ +NV+ DL V L
Sbjct: 148 AAEGRYIIKFVMGQLRLGIADYTVLDALAVAFTGDKANRQVLENAYNVSSDLGTVARLLA 207
Query: 208 DRN-QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSE 266
+ K I + K +RP LA RI A A ++ GK V E K DG+R+Q+HK
Sbjct: 208 TKGLDAVKSIKITLFKPIRPMLAERIRTAEEALERMEGKAAV-EYKLDGERVQLHKGKQN 266
Query: 267 IHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAA 326
+ FSR + + +++ I+ + IL+GE++ + + F QE+
Sbjct: 267 VELFSRRLEKITSHYPDVAEAIKS--IKSEVILEGEVVAINAETGDYLPF---QELMHRR 321
Query: 327 R-----DGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
R + + + + F FDVLYV S + ER +LL+K++ K
Sbjct: 322 RKYGVEEAMENYPVVMNF-FDVLYVDGKSKTELTYMERRKLLKKIIDAVKD--------- 371
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKL 441
++ VR +A +E+++F IE+ EG+++K L S + G R W+KL
Sbjct: 372 --DNKVRL----IEQTIATKPEEIDRFMAAAIEDGCEGVMIKQLSSTYRAGAREYAWVKL 425
Query: 442 KPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 500
K EY +D LD++++G +G GRR G+ L+A A D F S +VGTG
Sbjct: 426 KREYRSDLADTLDLVVVGALHGRGRRTGKYGALLLA-----AYDQKTDMFQSVTKVGTGF 480
Query: 501 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIR 560
+D L+ +L+ + + + + DVW E +I I S+I
Sbjct: 481 TDVHLEQFYNELEKHIINQRHAR----------VQTGMDMDVWFEP--NMVIEVIASEIT 528
Query: 561 TIRSEVFSAP-------YSLRFPRID-RVRYDKPWHDCLDVQSFVEL 599
S + +LRFP+ ++R DK D + VE+
Sbjct: 529 LSPSHAAALNALRPGYGLALRFPKFTGKIRDDKKPEDATATEEIVEM 575
>gi|358379416|gb|EHK17096.1| hypothetical protein TRIVIDRAFT_183439 [Trichoderma virens Gv29-8]
Length = 854
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 132/506 (26%), Positives = 218/506 (43%), Gaps = 85/506 (16%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH-----PDAEDLFNVTCDLK 200
K E K+II + L+LG++++++ HE P DL N LK
Sbjct: 370 KGGPSEAKYIIRFLEGKLRLGLADRTVLVSLAQAVVAHEAEVKGKIPSTTDLENGESILK 429
Query: 201 LVCEKLKDRN------------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVV 248
V +L + + + G ++P LA + G+
Sbjct: 430 TVYSELPSYDVIIPAMLQYGIANLREHCKLRPGVPLKPMLAKPTKAITEVLDRFEGQTFT 489
Query: 249 IECKFDGDRIQIH------KNGSEIH-YFSRSFLDHSE-YGHAMSKIIEQNVLVDR---- 296
E K+DG+R QIH GS + FSR+ D S+ Y + K+ N V
Sbjct: 490 CEYKYDGERAQIHYVSKDAPQGSGVSSIFSRNSEDLSKKYPDVLEKL---NTWVKEDTKS 546
Query: 297 CILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD--RQLCYFAFDVLYVGDTSVIHQ 354
+LD E + WD + + F Q + + +D + D ++C FAFD+LY+ +V+ +
Sbjct: 547 FVLDCETVAWDVTEKKVLPF--QQLMTRKRKDVKAEDIKVKVCVFAFDLLYLNGEAVVEK 604
Query: 355 SLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIE 414
SL+ER ELL P +G + +H+ Q +DE++ F E+++
Sbjct: 605 SLRERRELLNTAFAPVEG-------EFAFATHMNGQ----------ELDEIQTFLDESVK 647
Query: 415 NRDEGIVLKDLGSK---WEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEV 470
EG+++K L K +EP RS WLK+K +Y+ G LD++++G YYG G+R
Sbjct: 648 ASCEGLMVKMLDGKESGYEPSKRSRNWLKIKKDYLSGVGDSLDLVVLGAYYGKGKRTSVY 707
Query: 471 AQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFY 530
FL+A + DTY + C +GTG S++ L+ + +L + P FY
Sbjct: 708 GAFLLACY-NASTDTYE----TVCNIGTGFSEQVLEDLYAQLS------QITIARPKPFY 756
Query: 531 QVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP----YSLRFPRIDRVR 582
+ + +PDVW E K+ L+++ + E SLRFPR ++R
Sbjct: 757 SHSTGGQHQPDVWFEPRYVWEVKTADLTLSPRYKAGWKEGVDPAGEKGISLRFPRFIKIR 816
Query: 583 YDKPWHDCLDVQSFVELVHSSNGTTQ 608
DK + + E+ T+
Sbjct: 817 DDKKPDEATSSRQVAEMYRKQESVTK 842
>gi|358058969|dbj|GAA95367.1| hypothetical protein E5Q_02023.2 [Mixia osmundae IAM 14324]
Length = 1165
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 171/673 (25%), Positives = 291/673 (43%), Gaps = 139/673 (20%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV------DYFSALRLILPSL--DRERGSY 63
LV F I+ T KR + FL Y +V D + L + L D E
Sbjct: 550 LVKTFQLIEGTS----KRLEISAFLSAYLLAVIQRSPEDLTRVVYLCINRLCPDYEGLEL 605
Query: 64 GLKESVLANCLIDALG--MSKDSADAVRLINWRKGGAAPNAGNFPMVA-----AEVLQRR 116
G+ E +L + +A G +++ AD V+ G+ +VA + +
Sbjct: 606 GIGEGLLQKAIAEATGRGLAQVKADYVK------------TGDLGLVAQSSRKVQPTMFK 653
Query: 117 QGMISGGLTIKELNDLLDRLASSEN-RAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLG 175
Q + + K L D+ AS +N +A+K ++ L+ E K++I + L++G
Sbjct: 654 QKPLDVRVVFKNLKDIA--AASGQNSQAKKTGIIKKLLAGCEGSEAKFVIRSLEGKLRIG 711
Query: 176 ISEKSIF---------HEFHPDAEDLFNVTCD---------LKLVCEKL----------- 206
++E+++ HE + + + +K V +L
Sbjct: 712 LAERTVLIALATAVVRHEIEQSGKKISQAALEQRIEAGQDMIKQVFSELPSYDKIVPALL 771
Query: 207 -KDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KN 263
+ ++ H + G ++P LA + G++ E K+DG+R Q+H ++
Sbjct: 772 EQGIDKLHDVCALTAGIPLKPMLAKPTKAITEVLDRFEGQDFTCEYKYDGERAQVHMLED 831
Query: 264 GSEIHYFSRSFLDHS-EYGHAMSKIIEQNVLVDRCI--------LDGEMLVWDTSLNRFA 314
GS I FSR+ D S +Y ++EQ + RCI +D E W R
Sbjct: 832 GS-IKVFSRNSEDMSIKY----PDLVEQ---LPRCIKPSVKSFVIDAECTAWSKDEKRLL 883
Query: 315 EFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSK 371
F QE++K R G+ + ++ FAFD+LY+ +++ L R +LL++ P
Sbjct: 884 PF---QELSKRKRKGVKIEDVTVRVKLFAFDLLYLNGETLLKTDLDSRRKLLREHFSP-- 938
Query: 372 GRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSK 428
V + + S A +V+ ++ F E+I+ EG+++K L G+
Sbjct: 939 ---------------VANEFDFATSADASDVEHIQAFLDESIKQGCEGLMVKMLHGQGAY 983
Query: 429 WEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYP 487
+EP RS WLK+K +Y++ G D+ +IGGY+G G+R FL+A + PD+
Sbjct: 984 YEPSRRSMNWLKVKKDYLQGVGDSFDLTVIGGYHGRGKRTAVYGAFLLACYD---PDS-- 1038
Query: 488 RRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESP 547
+ + C++GTG S+E LD+ T LKP +E KR +Y+V + PDV+ E
Sbjct: 1039 ESYQAVCKLGTGFSEEALDSHYTVLKP----HECGKRG---YYEVGTAT---PDVYFEP- 1087
Query: 548 EKSIILSITSDIRTIRSEVFSAP---------YSLRFPRIDRVRYDKPWHDCLDVQSFVE 598
+ + + +D+ S V++A SLRFPR R+R DK D F+
Sbjct: 1088 -RVVWEVLAADLSL--SPVYTAAREQLGGERGVSLRFPRFIRIRDDKGVEDS-TTPEFIA 1143
Query: 599 LVHSSNGTTQKGK 611
+ T GK
Sbjct: 1144 EAYQRQAVTVNGK 1156
>gi|327353118|gb|EGE81975.1| DNA ligase [Ajellomyces dermatitidis ATCC 18188]
Length = 1004
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 149/610 (24%), Positives = 257/610 (42%), Gaps = 125/610 (20%)
Query: 103 GNFPMVAAEVLQRRQGMISGG-LTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNA 158
G+ +VAA+ + M LT++ +++ L +A ++ ++ +KIS + L+ +A
Sbjct: 424 GDLGLVAAKSRSNQPTMFKPKPLTVRGVHEGLLAIAKTQGHGSQEKKISAIKKLLSSADA 483
Query: 159 -------------------QEMKWIIMIILKDLKLGISEKSIF---------HEFH---- 186
E K+II + L+LG++EK++ HE
Sbjct: 484 ALAGKGPKGIDITHNKGGPSEAKFIIRFLEGKLRLGLAEKTVLVALAHAMVAHEVEVQGK 543
Query: 187 --PDAEDLFNVTCDLKLVCEKLKDR-------------NQRHKRQDIEVGKAVRPQLAMR 231
P E+L LK V +L N + K + ++ G ++P LA
Sbjct: 544 KAPSTEELAKGEAILKSVYSELPSYEVIIPAMLEHGIFNLKDKCK-LQPGVPLKPMLAKP 602
Query: 232 IGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG-SEIHYFSRSFLDHSEYGHAMSKIIEQ 290
+ GK E K+DG+R QIH EIH ++ + + G + I +
Sbjct: 603 TKSITEVLDRFEGKNFTCEYKYDGERAQIHYVAREEIHKYASTASTLQKDGEGICAIFSR 662
Query: 291 N----------VL----------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGL 330
N +L +LD E + WD + F Q + + +D
Sbjct: 663 NSEDLSKKYPDILGKLESWVKKGTTSFVLDCETVAWDMVNKKVLPF--QQLMTRKRKDVK 720
Query: 331 SSDRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVR 388
+ D ++ C FAFD+L++ + + +L+ER LL + P +G E + HG
Sbjct: 721 AEDVKVKVCVFAFDLLFLNGQATVKMTLRERRALLHEAFTPIEG--EFVFAQHG------ 772
Query: 389 PQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEY 445
+++DE++ E+++ EG+++K L S +EP RS WLK+K +Y
Sbjct: 773 ---------DTNDLDEIQTLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDY 823
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD++++G YYG G+R FL+A P+T + F + C +GTG S+
Sbjct: 824 LAGIGDSLDLVVLGAYYGRGKRTSVYGAFLLAAYN---PNT--QNFETVCNIGTGFSEAL 878
Query: 505 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDI 559
L+ + L P + PK FY ++ K++PDVW E P+ K+ L+++
Sbjct: 879 LEELHKALSPLV--IDRPK----PFYDHSSVPKDQPDVWFE-PKYVWEVKAADLTLSPRY 931
Query: 560 RTIRSEVFSAP----------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQK 609
+ EV SLRFPR + R DK + + E+ ++
Sbjct: 932 KAAADEVMGIASAGSNGTVKGISLRFPRYIKARDDKKPEESTTTRQVAEMYRRQESVSKD 991
Query: 610 GKEYGGLQDD 619
GG+ DD
Sbjct: 992 TAGKGGVDDD 1001
>gi|255726816|ref|XP_002548334.1| DNA ligase I, mitochondrial precursor [Candida tropicalis MYA-3404]
gi|240134258|gb|EER33813.1| DNA ligase I, mitochondrial precursor [Candida tropicalis MYA-3404]
Length = 766
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 137/513 (26%), Positives = 237/513 (46%), Gaps = 77/513 (15%)
Query: 124 LTIKELNDLLDRLASS---ENRAEKISVLSTLIKKTN--AQEMKWIIMIILKDLKLGISE 178
L I + + L ++A S +++++KI ++ ++ + A E K++I + L++GI+E
Sbjct: 268 LDIDTVFENLQQIAKSNGKDSQSKKIGLIKKMLSACDPKANEAKFLIRSLAGKLRIGIAE 327
Query: 179 KSI-------FHEF--------HPD----AEDLFNVTC----DLKLVCEKLKDRNQRHKR 215
K++ F F +PD AE++ + ++V +K + +
Sbjct: 328 KTLVVGLAQAFVNFENKTNKRINPDKLAEAEEIVKEAISRVPNYEVVLKKAYEHGIFNLL 387
Query: 216 QDIEV--GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFS 271
+ V G ++ LA + + E E K+DG R Q+H +G+ + +S
Sbjct: 388 DHVHVTPGIPLKAMLAKPTKSIGEIFDRFQDAEFTCEYKYDGFRAQVHVLSDGT-VKVYS 446
Query: 272 RSFLDHSEYGHAMSKIIEQNVLVDRC----ILDGEMLVWDTSLNRFAEFGSNQEIAKAAR 327
R+ D +E + I+ + D+ ILD E + WD ++ F Q + R
Sbjct: 447 RNLEDMTETYPDLVSIVNE-FTTDKSSVSFILDCEAVAWDRIQHKILPF---QRLTTRKR 502
Query: 328 DGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLN 384
++ + +C +AFD+LY D S++ +SL +R +LL + KP + +
Sbjct: 503 KDVNEEDITVNICLYAFDLLYFQDESLLTRSLADRRKLLHEKFKPIDEKFQFATAKDS-- 560
Query: 385 SHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKL 441
+ N++ ++ F ++I++ EG+++K L S +EP RS WLKL
Sbjct: 561 --------------SSNLEVLQTFLDQSIKDSCEGLMVKMLNGPDSFYEPSKRSRNWLKL 606
Query: 442 KPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 500
K +Y+ G LD+++IG Y G G+R G FL+A + D + C++GTG
Sbjct: 607 KKDYLAGVGDSLDLVVIGAYSGKGKRTGTYGGFLLASYNQDTGD-----LETCCKIGTGF 661
Query: 501 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TS 557
SDE+L ++ KL P + + PK+ F TNNS PDVW E +L+ S
Sbjct: 662 SDEDLASLYKKLHP--TEIKTPKKY---FVYETNNSNAVPDVWFEPSLLFEVLTADLSLS 716
Query: 558 DIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDC 590
I + F SLRFPR R+R DK D
Sbjct: 717 PIYKTGHQEFGKGISLRFPRFIRLREDKNIEDA 749
>gi|83033053|ref|XP_729309.1| DNA ligase 1 [Plasmodium yoelii yoelii 17XNL]
gi|23486709|gb|EAA20874.1| DNA ligase 1 [Plasmodium yoelii yoelii]
Length = 826
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 193/407 (47%), Gaps = 43/407 (10%)
Query: 208 DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSE 266
D N K+ ++ G V+P LA + + E K+DG+R QIH +
Sbjct: 432 DMNVLMKKCTVKTGVPVQPMLAKPTKGIQEVLDRFNNVTFTCEYKYDGERAQIHYIDKDN 491
Query: 267 IHYFSRSFLDHSEYGHAMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAK 324
I FSR+ +E + +I++ ++ V I+D E++ +D + F +
Sbjct: 492 IKIFSRNLETMTEKYPDVIQIVKDQIMPGVTESIIDSEVVAYDIENKKILPFQILTTRKR 551
Query: 325 AARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLN 384
D + ++C F FD++ VI + L+ R +LL +++ +G LE + +
Sbjct: 552 KDVDIENIKVKICLFPFDLICCNGVPVIKEPLEIRRKLLYSLLRCKEGVLE-----YATH 606
Query: 385 SHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLK 442
S + +N+D+++ F ++ IEN EG+++K L + +EP RS WLK+K
Sbjct: 607 SEM------------NNIDDIDIFLQDAIENNCEGLMVKTLLDNASYEPSRRSLNWLKVK 654
Query: 443 PEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLS 501
+YI SD +D++ I GYYG G+R G F++A A ++ F + C+ GTG S
Sbjct: 655 KDYIEGLSDSVDLVPIAGYYGKGKRSGVYGAFVLA-----AYNSETENFQTVCKAGTGFS 709
Query: 502 DEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITS 557
DE L+A+ L P + S+Y+V++ K PDVW ++ K+ LS+ S
Sbjct: 710 DEILNALHESLSDKI----IPNKK--SYYEVSD--KLNPDVWFDAHYVWEIKAADLSL-S 760
Query: 558 DIRTIRSEVFS--APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
+ T V+S LRFPR R+R DK Q VE +
Sbjct: 761 PVHTAAIGVYSDDKGIGLRFPRFLRLRDDKNPEQATTAQQIVEFYEA 807
>gi|358369869|dbj|GAA86482.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Aspergillus
kawachii IFO 4308]
Length = 889
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 134/528 (25%), Positives = 224/528 (42%), Gaps = 93/528 (17%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH------PDAEDLFNVTCDL 199
K E K+I+ + L+LG++EK++ HE P AE L L
Sbjct: 389 KGGPSEAKYIVRFLEGKLRLGLAEKTVLVALAQAVVAHEAAMEGQKTPSAEKLAEGEAIL 448
Query: 200 KLVCEKLK------------DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEV 247
K V +L + K ++ G ++P LA + GKE
Sbjct: 449 KTVYSELPAYEVIIPAILEHGLSNLPKVCKLQPGIPLKPMLAKPTKSITEVLDRFEGKEF 508
Query: 248 VIECKFDGDRIQIHKNGSE-IHYFSRSFLDHSEYGHAMSKIIEQN----------VL--- 293
E K+DG+R QIH + IH + + + +S I +N VL
Sbjct: 509 TCEYKYDGERAQIHYVAPDSIHQYPGATATLKKDSKGLSAIFSRNSEDLSKKYPDVLAKL 568
Query: 294 -------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVL 344
V +LD E + WDT + F Q + + +D + D ++ C FAFD+L
Sbjct: 569 DGWIKEGVQSFVLDCETVAWDTENKKVLPF--QQLMTRKRKDVKAEDVKVKVCVFAFDLL 626
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
++ + +SL+ER ELL + ++G + +G N++V +DE
Sbjct: 627 FLNGEPTVKKSLRERRELLHDSFQVTEGEFQ--FAQYG-NTNV--------------LDE 669
Query: 405 VEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 460
++ ++++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G Y
Sbjct: 670 IQTLLDDSVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVLGAY 729
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
+G G+R FL+A A ++ + + + C +GTG S+ L+ L P +
Sbjct: 730 HGRGKRTSVYGAFLLA-----AYNSSTQTYETICNIGTGFSEAILEEFYNALSPL--TID 782
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP-----Y 571
PK FY +N K++PDVW E K+ L+++ + E
Sbjct: 783 RPK----PFYSHSNVPKDQPDVWFEPRLVWEVKTADLTLSPRYKAAADEFMGTTGGGKGV 838
Query: 572 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
SLRFPR + R DK ++ E+ ++ GG+ DD
Sbjct: 839 SLRFPRFIKSRDDKKPEQATTTRAVAEMYRKQEAVQKENAGKGGVDDD 886
>gi|358058968|dbj|GAA95366.1| hypothetical protein E5Q_02023.1 [Mixia osmundae IAM 14324]
Length = 1404
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 170/673 (25%), Positives = 289/673 (42%), Gaps = 139/673 (20%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV------DYFSALRLILPSL--DRERGSY 63
LV F I+ T KR + FL Y +V D + L + L D E
Sbjct: 789 LVKTFQLIEGTS----KRLEISAFLSAYLLAVIQRSPEDLTRVVYLCINRLCPDYEGLEL 844
Query: 64 GLKESVLANCLIDALG--MSKDSADAVRLINWRKGGAAPNAGNFPMVA-----AEVLQRR 116
G+ E +L + +A G +++ AD V+ G+ +VA + +
Sbjct: 845 GIGEGLLQKAIAEATGRGLAQVKADYVK------------TGDLGLVAQSSRKVQPTMFK 892
Query: 117 QGMISGGLTIKELNDLLDRLASSEN-RAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLG 175
Q + + K L D+ AS +N +A+K ++ L+ E K++I + L++G
Sbjct: 893 QKPLDVRVVFKNLKDIA--AASGQNSQAKKTGIIKKLLAGCEGSEAKFVIRSLEGKLRIG 950
Query: 176 ISEKSIF---------HEFHPDAEDLFNVTCD---------LKLVCEKL----------- 206
++E+++ HE + + + +K V +L
Sbjct: 951 LAERTVLIALATAVVRHEIEQSGKKISQAALEQRIEAGQDMIKQVFSELPSYDKIVPALL 1010
Query: 207 -KDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KN 263
+ ++ H + G ++P LA + G++ E K+DG+R Q+H ++
Sbjct: 1011 EQGIDKLHDVCALTAGIPLKPMLAKPTKAITEVLDRFEGQDFTCEYKYDGERAQVHMLED 1070
Query: 264 GSEIHYFSRSFLDHS-EYGHAMSKIIEQNVLVDRCI--------LDGEMLVWDTSLNRFA 314
GS I FSR+ D S +Y ++EQ + RCI +D E W R
Sbjct: 1071 GS-IKVFSRNSEDMSIKY----PDLVEQ---LPRCIKPSVKSFVIDAECTAWSKDEKRLL 1122
Query: 315 EFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSK 371
F QE++K R G+ + ++ FAFD+LY+ +++ L R +LL++ P
Sbjct: 1123 PF---QELSKRKRKGVKIEDVTVRVKLFAFDLLYLNGETLLKTDLDSRRKLLREHFSPVA 1179
Query: 372 GRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSK 428
+ S A +V+ ++ F E+I+ EG+++K L G+
Sbjct: 1180 NEFDF-----------------ATSADASDVEHIQAFLDESIKQGCEGLMVKMLHGQGAY 1222
Query: 429 WEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYP 487
+EP RS WLK+K +Y++ G D+ +IGGY+G G+R FL+A + PD+
Sbjct: 1223 YEPSRRSMNWLKVKKDYLQGVGDSFDLTVIGGYHGRGKRTAVYGAFLLACYD---PDS-- 1277
Query: 488 RRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESP 547
+ + C++GTG S+E LD+ T LKP +E KR +Y+V + PDV+ E
Sbjct: 1278 ESYQAVCKLGTGFSEEALDSHYTVLKP----HECGKRG---YYEVGTAT---PDVYFEP- 1326
Query: 548 EKSIILSITSDIRTIRSEVFSAP---------YSLRFPRIDRVRYDKPWHDCLDVQSFVE 598
+ + + +D+ S V++A SLRFPR R+R DK D F+
Sbjct: 1327 -RVVWEVLAADLSL--SPVYTAAREQLGGERGVSLRFPRFIRIRDDKGVEDS-TTPEFIA 1382
Query: 599 LVHSSNGTTQKGK 611
+ T GK
Sbjct: 1383 EAYQRQAVTVNGK 1395
>gi|297527107|ref|YP_003669131.1| DNA ligase I, ATP-dependent Dnl1 [Staphylothermus hellenicus DSM
12710]
gi|297256023|gb|ADI32232.1| DNA ligase I, ATP-dependent Dnl1 [Staphylothermus hellenicus DSM
12710]
Length = 611
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 137/502 (27%), Positives = 237/502 (47%), Gaps = 63/502 (12%)
Query: 124 LTIKELNDLLDR--LASSE-NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ ++ + L R LA+ E +R K+ +L+ L+ + +E K+II + L+LGI + +
Sbjct: 137 LTVGQVYETLSRVALATGEGSRDIKLKLLAGLLSDASPKEAKYIIRFVEGRLRLGIGDAT 196
Query: 181 IFHEF----------HPDAEDLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQLA 229
I P E +N+ DL + + L + + K +VG +RP LA
Sbjct: 197 IMDALAIVYGGGAHARPIVERAYNLRADLGHIAKILATQGLEALKGIKPQVGIPIRPMLA 256
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE 289
R+ + +K+ G V E K+DG+R QIHK G +I +SR + + +
Sbjct: 257 ERLNNPVEILKKVGGDSFV-EYKYDGERAQIHKLGDKIWIYSRRLENITHQYPDVVDYAR 315
Query: 290 QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG----LSSDRQLCYFAFDVLY 345
+ + D I++GE++ +D F QE+ R + + F FD+LY
Sbjct: 316 KYIKADEAIVEGEIVAYDPDTGELRPF---QELMHRKRKHDIHIAIKEVPVKVFLFDLLY 372
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
V + L ER L+++++ + ET + ++R ++ DE+
Sbjct: 373 VDGEDYTLKPLPERRAKLEEIIEQT----ETF----QIAEYIR----------TNDPDEL 414
Query: 406 EKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYG 462
EKFF + IE+ EG+++K L + ++ G R W+K K +Y D +D++IIG +YG
Sbjct: 415 EKFFFKAIEDGAEGVMIKALHKNAIYQAGTRGWLWIKYKRDYKSEMIDTVDLVIIGAFYG 474
Query: 463 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
GRRGG+ L+A + P D F S C+VG+G DE++D + LKPY ++++P
Sbjct: 475 RGRRGGKYGALLMA-SYNPDKDV----FESVCKVGSGFKDEDIDKLPEMLKPYIIEHKHP 529
Query: 523 KRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA-----PYSLRFPR 577
+ ++ +PD+W+ + I+ + + + A S+RFPR
Sbjct: 530 RVV----------ARMKPDIWVTPALVAEIIGAELTLSPLHTCCLDAIKPGVGISIRFPR 579
Query: 578 IDRVRYDKPWHDCLDVQSFVEL 599
R R DK D Q +E+
Sbjct: 580 FIRWRPDKGPEDATTSQELLEM 601
>gi|225851429|ref|YP_002731663.1| ATP-dependent DNA ligase [Persephonella marina EX-H1]
gi|254778144|sp|C0QSL7.1|DNLI_PERMH RecName: Full=Probable DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
gi|225645043|gb|ACO03229.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP])(Lig(Tk))
[Persephonella marina EX-H1]
Length = 582
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 131/507 (25%), Positives = 238/507 (46%), Gaps = 69/507 (13%)
Query: 122 GGLTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE 178
G LT++E+ L +A + +K+ + + L+KK + E+K+++ I + L+LGI +
Sbjct: 107 GILTVEEVYRTLREIAQTTGYGSTKKKLQLFTELLKKASPLEVKYLLRTITERLRLGIGD 166
Query: 179 KSIF----------HEFHPDAEDLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQ 227
+I E E +N++ DL V L ++ K IE+G+ +RP
Sbjct: 167 NTIMDALSIAFTGKKENREIIERAYNISSDLGYVARILAEKGLDAVKNIKIEIGRPIRPM 226
Query: 228 LAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKI 287
LA R+ +KL GK E K+DG+RIQ+H+ G + FSR + ++ + +
Sbjct: 227 LAERMAIPSYILKKLGGKAGA-EYKYDGERIQVHRKGDTFYLFSRRLENITDQFPDLIEF 285
Query: 288 IEQNVLVDRCILDGEMLVWDTSLNRFAEFGS--NQEIAKAARDGLSSDRQLCYFAFDVLY 345
+++++ + CI++ E +V D S F N+ + R + + F FD++Y
Sbjct: 286 LKESI-PEECIIELEAVVIDPSSGAIRPFQDLMNRRVKYVTRFHIMM-YPIAGFIFDIMY 343
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
+ + + ER ++L++ +K ++ +N R + NV+++
Sbjct: 344 LNGEDLTLKPYPERRKILEENIKITE----------RINLSERK--------IVDNVEDL 385
Query: 406 EKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYG 462
E FF + IE+ EG+V K L S ++ G R W+K K +Y +D LD++++G +YG
Sbjct: 386 ESFFHQAIEDGCEGLVCKSLQKDSIYQAGKRGFLWIKYKRDYKSHLADTLDLVVVGAFYG 445
Query: 463 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
G R G L+A + P+T +F + C+VGTG +++ + LK + +++P
Sbjct: 446 KGARTGYFGSLLMACYD---PET--DQFKTVCKVGTGFKEDDFKKLDDLLKEHTLDHKHP 500
Query: 523 KRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY---------SL 573
+ NS D+W E ++L IT T+ S V + + L
Sbjct: 501 R----------VNSILSADIWYEP---FLVLEITGAELTL-SPVHTCGWDRIKINRGLGL 546
Query: 574 RFPRID-RVRYDKPWHDCLDVQSFVEL 599
RFPR R R+DK D + + +
Sbjct: 547 RFPRFTGRYRFDKRPEDATTEEEIINM 573
>gi|163782827|ref|ZP_02177823.1| DNA ligase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881948|gb|EDP75456.1| DNA ligase [Hydrogenivirga sp. 128-5-R1-1]
Length = 583
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 150/576 (26%), Positives = 258/576 (44%), Gaps = 99/576 (17%)
Query: 63 YGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISG 122
Y E + L + LG+ + S + R++ G +AG ++ + + G
Sbjct: 58 YNFGEKLAIRSLAEILGIDEHSVEE-RVVEL---GDLGDAGQ------KLYEEKGFQPKG 107
Query: 123 GLTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEK 179
L++KE+ + L +A + +K + L+ K E+K+++ I + L+LG+ +
Sbjct: 108 SLSVKEVYETLLEIAKTSGVGALKKKSELFKKLLSKATPLEVKYLLRTITEKLRLGMGDN 167
Query: 180 SIFHE----FHPDA------EDLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQL 228
++ F D E +N++ DL V L ++ + K IEVG+ VRP L
Sbjct: 168 TVMDALAVAFTGDQKNRVHIERAYNLSSDLGYVARVLVEKGLEGIKAVKIEVGRPVRPML 227
Query: 229 AMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSR-------SFLDHSEYG 281
A R+ +KL G+ E K+DG+RIQ H+ G E +SR F D E+
Sbjct: 228 AERMAIPSLILKKLGGR-CGAEYKYDGERIQAHRKGDEFWLYSRRLENITHQFPDLIEF- 285
Query: 282 HAMSKIIEQNVLVD-RCIL----DGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL 336
+ + I + +V+ C++ G++ + +NR ++ S I K G
Sbjct: 286 --LKESIPHDFIVELECVVIDPASGQIQPFQVLMNRKVKYVSRYHILKYPVAG------- 336
Query: 337 CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
F FD+LY+ + + ER E L++VVK + +N R
Sbjct: 337 --FLFDILYLDGEDLTLKPYPERRETLERVVKTTD----------RVNLATRK------- 377
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LD 453
+ NV+++E FF + IE+ EG+V K L S +E G R W+K K +Y +D LD
Sbjct: 378 -IVDNVEDLEAFFHQAIEDGCEGLVCKSLAENSIYEAGKRGFLWIKYKRDYKSHLADTLD 436
Query: 454 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 513
++++G +YG G+R G L+A + P+T +F + C+VGTG ++++ + LK
Sbjct: 437 LVVVGAFYGKGQRAGHFGSLLMACYD---PET--DQFKTVCKVGTGFTEDDFKKLEEILK 491
Query: 514 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY-- 571
+ + +P+ NS D+W E ++L IT T S V + +
Sbjct: 492 DHRIDHRHPR----------VNSIISADIWFEP---FLVLEITGAELTY-SPVHTCAWDK 537
Query: 572 -------SLRFPRID-RVRYDKPWHDCLDVQSFVEL 599
LRFPR R R+DK D + +E+
Sbjct: 538 VKPGRGLGLRFPRFTGRYRFDKRPEDATTEREILEM 573
>gi|41615291|ref|NP_963789.1| hypothetical protein NEQ509 [Nanoarchaeum equitans Kin4-M]
gi|74579663|sp|Q74M64.1|DNLI_NANEQ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|40069015|gb|AAR39350.1| NEQ509 [Nanoarchaeum equitans Kin4-M]
Length = 567
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 137/622 (22%), Positives = 275/622 (44%), Gaps = 85/622 (13%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSL--DRERGSYGLKESV 69
L +LF+ ++ +K +FL D Y L L+ ++ E+ + G+ E
Sbjct: 6 LANLFSKLETISDKTRKVQYIARFLKELKDQ--YKETLLLLQGTVFYPWEQKNLGIAEKG 63
Query: 70 LANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEV--LQRRQGMISGGLTIK 127
+ + A G+ K + + + G+ +VA + +++++ ++ LT+K
Sbjct: 64 VIRAISIAYGIEKQKVEELFI----------KYGDLGIVAEKACEMRKQKPLLLKPLTVK 113
Query: 128 ELNDLLDRLASSENRA---EKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEK----- 179
++ L ++A E +KI + L+ +E K+I+ + L++L++G+ E
Sbjct: 114 DVYQTLRKIADIEGEGSQDKKIITFAKLLVNAKPKEAKYIVRLALEELRIGVGEGIIRDA 173
Query: 180 -SIFHEFHPDA-EDLFNVTCDLKLVCEKLKDRNQRHKRQ-DIEVGKAVRPQLAMRIGDAH 236
+I P+A E +++ D V K++ ++ Q ++VG+ R LA+R +
Sbjct: 174 IAIAFSVTPEAVEYAYSILLDFGEVVRIAKEQGEQGLWQVKLQVGRPFRVMLAIRARNVQ 233
Query: 237 AAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDR 296
A+ + G+ +IE K+DG R+QIHK G ++ ++R D + + I+ V +
Sbjct: 234 EAF-DIVGRPAMIEAKYDGFRLQIHKKGDQVWLWTRRLEDVTRQFPDVVNIVRNRVKANE 292
Query: 297 CILDGEMLVWDTSLNRFAEFGSNQEIAKAARD--GLSSDRQLCYFAFDVLYVGDTSVIHQ 354
I + E + +D N+F F + K D ++ + + AFD++Y+ ++ +
Sbjct: 293 IIFEAEAVGYDKKTNKFLPFQKISQRVKRKYDIEKMAKEIPVELHAFDIVYLEGEQLMKK 352
Query: 355 SLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIE 414
KER LL+KV+ +H + + ++ + + +F+++ +
Sbjct: 353 PFKERRALLEKVIDEK---------EHEIQLSI--------GIIEKDDKKAYQFYQDCLN 395
Query: 415 NRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFL 474
EG++ K+L + ++PG R G +KLKP LD++I+ +G G+R G + F
Sbjct: 396 KGLEGVMFKNLNAPYQPGRRVGYMVKLKPTL----ETLDLVIVAAEWGEGKRSGWLTSFT 451
Query: 475 VALAERPAPDTYPRRFISFCRVGTGLSDEE-------LDAVVTKLKPYFRKYEYPKRAPP 527
VA A D ++ VGTG+ +++ + + LKPY K E K
Sbjct: 452 VA-----ALDKDTGNYLEVGEVGTGIKEKKERAEDITFEELTELLKPYIYKQEGKKVYV- 505
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 587
+P + +E + I S + + ++LRFPRI R+R+D+
Sbjct: 506 -----------KPKIVVEVAYEEI----------QESPRYKSGFALRFPRIVRIRFDRSP 544
Query: 588 HDCLDVQSFVELVHSSNGTTQK 609
+ + ++ G K
Sbjct: 545 KEIDTIDRIKQIYEMQRGGIHK 566
>gi|124512824|ref|XP_001349768.1| DNA ligase I [Plasmodium falciparum 3D7]
gi|23615185|emb|CAD52175.1| DNA ligase I [Plasmodium falciparum 3D7]
gi|23683342|gb|AAL59668.2| DNA ligase 1 [Plasmodium falciparum]
gi|24935322|gb|AAN64156.1| DNA ligase 1 precursor [Plasmodium falciparum]
Length = 912
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 186/415 (44%), Gaps = 59/415 (14%)
Query: 208 DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSE 266
D N K+ ++ G V+P LA + + E K+DG+R QIH +
Sbjct: 518 DMNTLSKKCTVKTGIPVQPMLAKPTKGVQEVLDRFNNVTFTCEYKYDGERAQIHYIDKDN 577
Query: 267 IHYFSRSFLDHSEYGHAMSKIIEQNV--LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAK 324
I FSR+ +E + +II+ + V CI+D E++ +D N+ F +
Sbjct: 578 IKIFSRNLETMTEKYPDVIQIIKDQIGENVKECIIDSEVVAYDIVNNKILPFQVLTTRKR 637
Query: 325 AARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLN 384
D + ++C F FD++ VI + L R +LL ++K G L + +
Sbjct: 638 KDVDIENIKVKVCLFPFDLICCNGIPVIKEPLAVRRKLLYSLLKSKDGVLS-----YATH 692
Query: 385 SHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLK 442
S + +N+++++ F ++ IEN EG+++K L + +EP RS WLK+K
Sbjct: 693 SEM------------NNIEDIDMFLQDAIENNCEGLMVKTLVENASYEPSRRSLNWLKVK 740
Query: 443 PEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLS 501
+Y+ SD +D++ I GYYG G+R G F++A A ++ F + C+ GTG S
Sbjct: 741 KDYVEGLSDSVDLVPIAGYYGKGKRSGVYGAFVLA-----AYNSETENFQTVCKAGTGFS 795
Query: 502 DEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE--------------SP 547
DE L + L P + S+Y+V++ K PDVW + SP
Sbjct: 796 DEILSTLYETLSEKI----IPNKK--SYYEVSD--KLNPDVWFDAHYVWEVKAADLSLSP 847
Query: 548 EKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
+ + I +D + I LRFPR R+R DK Q V+ +
Sbjct: 848 VHTAAIGIYADDKGI---------GLRFPRFLRLREDKNAEQATTTQQIVDFYEA 893
>gi|195149365|ref|XP_002015628.1| GL11174 [Drosophila persimilis]
gi|194109475|gb|EDW31518.1| GL11174 [Drosophila persimilis]
Length = 744
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 191/421 (45%), Gaps = 67/421 (15%)
Query: 208 DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG-SE 266
D + +R + G +RP LA H + + + E K+DG+R QIH N E
Sbjct: 348 DIKELQERCPMHPGMPLRPMLAQPTKGVHEVFERFGSMHITCEWKYDGERAQIHCNERGE 407
Query: 267 IHYFSRSFLDHS-EYGHAMSKIIEQNVL---VDRCILDGEMLVWDTSLNRFAEFGSNQEI 322
I FSR+ +++ +Y +++ + L V I+D E++ WD + F Q +
Sbjct: 408 ISIFSRNSENNTAKYPDLIAR--SKGFLKGAVQSYIIDSEIVAWDVERKQILPF---QVL 462
Query: 323 AKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVP 379
+ R + + Q+C + FD+LY+ T+++ L ER +LL + + +G +
Sbjct: 463 STRKRKNVDIEEIKVQVCVYIFDLLYINGTTLVTSPLSERRKLLLEHFQEVEGEWKFAT- 521
Query: 380 DHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGK 437
+L +++DEV++F +E+++ EG+++K L + +E RS
Sbjct: 522 ----------------ALDTNDIDEVQQFLEESVKGNCEGLMVKTLDEEATYEIAKRSRN 565
Query: 438 WLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRV 496
WLKLK +Y+ G LD+++IGGY G GRR G FL+A DT + S C++
Sbjct: 566 WLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGTYGGFLLACY-----DTENEEYQSICKI 620
Query: 497 GTGLSDEEL--------DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE 548
GTG +DE+L V+ K YFR +S PD W E +
Sbjct: 621 GTGFTDEDLRIHSEFLGKHVIPSAKSYFRY----------------DSSLEPDHWFEPAQ 664
Query: 549 ----KSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSS 603
K LS++ R V + SLRFPR R+R DK + D + S
Sbjct: 665 VWEVKCADLSLSPIHRAAIGIVDTERGISLRFPRFIRIRDDKSSENATDANQVAHMYQSQ 724
Query: 604 N 604
+
Sbjct: 725 D 725
>gi|159464902|ref|XP_001690680.1| DNA ligase IV [Chlamydomonas reinhardtii]
gi|158270407|gb|EDO96255.1| DNA ligase IV [Chlamydomonas reinhardtii]
Length = 831
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 136/473 (28%), Positives = 221/473 (46%), Gaps = 80/473 (16%)
Query: 66 KESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLT 125
+E LA+ L+ ALG S+ A AV+L+ AE L G+T
Sbjct: 12 QEKRLASLLVLALGASERDARAVKLL-------------LDKYCAESLPPDLA----GMT 54
Query: 126 IKELNDLLDRLASSENRAEKISVLST--LIKKTNAQEMKWIIMIILK-DLKLGISEKSIF 182
+ ELN LD LA+ RAE + L+++ +W++ ++L+ ++ +G+SE+S+
Sbjct: 55 LGELNAQLDALAAVAARAEASAAALLRWLLRRCTPAAGRWLLCVLLRGEMPVGLSERSLL 114
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRI--GDAHAAWR 240
H DA + F+ C L+ V L +KR G V PQLA + G R
Sbjct: 115 GCLHRDAWEAFSSCCSLEEVAASLGPAGAVYKRTP---GLCVSPQLAAKPPPGGLEEVVR 171
Query: 241 KLHGKEVVIECKFDGDRIQIHKNGSE--------------IHYFSRSFLDHSEYGHAMSK 286
+ G+ ++ KFDG RIQ G+ +HY+SR FLDH S
Sbjct: 172 RHSGRPFRVDTKFDGWRIQPAAAGAAGSAAGAAGAAPAPVVHYYSRRFLDHG----PRSG 227
Query: 287 IIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR------QLCYFA 340
+ + +LDGEMLVW+ + FG AA G + + ++ Y
Sbjct: 228 FNVLDGAPPQVVLDGEMLVWNKDRRAWEPFGCLAAAVHAAAAGWAPEELVKGWLEVVYVV 287
Query: 341 FDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAH 400
+D+LY DTS +H L+ER ELL + + P + L D L+S W +
Sbjct: 288 YDILYCSDTSTLHMPLQERQELLAQALMPGR----PLQQDGRLHS---------W--LCS 332
Query: 401 NVDEVEKFF-KETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGG 459
NV+++ + ++T E R+EG+V+K L + + P RS W+KLKP+Y+ G + D +++G
Sbjct: 333 NVEQLRRLHDQQTREQREEGVVIKSLTAPYRPAARSESWVKLKPDYLTLG-EFDCVVLG- 390
Query: 460 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 512
+ +G GG+ + P P P +F++F V + +E + + +L
Sbjct: 391 -WRAGTAGGDSS---------PPP---PLQFVTFAVVSALVREERREVLEARL 430
>gi|379005375|ref|YP_005261047.1| DNA ligase I [Pyrobaculum oguniense TE7]
gi|375160828|gb|AFA40440.1| DNA ligase I, ATP-dependent (dnl1) [Pyrobaculum oguniense TE7]
Length = 584
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 159/604 (26%), Positives = 262/604 (43%), Gaps = 74/604 (12%)
Query: 30 SKFRKFLDTYCDSVDYFSALRLILPSLDR--ERGSYGLKESVLANCLIDALGMSKDSADA 87
S F+K L D V Y LIL L E G+ E + L A G S+ ++
Sbjct: 28 SLFKKALPEEIDKVIY-----LILGDLRPPWEGLELGVGEKLCLRALAKATGTSQAELES 82
Query: 88 VRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGG----LTIKELNDLLDRLASSENRA 143
+ ++K G A + ++ +R G+++ G L + E+ D L ++A +
Sbjct: 83 L----YKKTGDIGEAARRSLASS----KRPGLLTFGSQKPLEVSEVYDTLLKVARASGEG 134
Query: 144 E---KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEF-------HPDAEDLF 193
KI++LS+L +++ +E K+I ++ L+LG+++ +I D E +
Sbjct: 135 AQDMKIALLSSLFARSSPEEGKYIARFVVGKLRLGVADMTIIEALADAYGVRKEDLERAY 194
Query: 194 NVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKF 253
+V DL + KL + + G V P LA R+ + KL G + E K+
Sbjct: 195 HVYPDLGHLA-KLVASGKPLDEVKVTPGVPVLPMLAQRLSSSSEILAKLGGT-AICEYKY 252
Query: 254 DGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRF 313
DG+R QIH + S + FSR D + + K +++ V+ IL+GE++ D
Sbjct: 253 DGERAQIHISQSGVRIFSRRLEDITHAYPDVVKAVKEAVMAREAILEGEIVAVDPDTGEM 312
Query: 314 AEFGSNQEIAKAARDGLSSDRQLCY----FAFDVLYVGDTSVIHQSLKERHELLQKVVKP 369
F QE+ R Y + FDV++V + ++ L R L ++V+
Sbjct: 313 LPF---QELMHRKRKHEVVAAMEMYPTVLYLFDVIFVDGEDLTNEPLIYRRVKLSEIVQE 369
Query: 370 S-KGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK 428
S K ++ W L+ + D V+ FF E + EG++ K S+
Sbjct: 370 SDKVQIAK------------------W-LMLDDPDSVDVFFHEAVSVGTEGLICKSPTSE 410
Query: 429 WEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYP 487
+E G R W+K K +Y D +D++++G +YG G+R G FL+A A P+ D
Sbjct: 411 YEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFYGRGKRAGLYGAFLLA-AYDPSSDM-- 467
Query: 488 RRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESP 547
F + C+VG+G +D +L + L+P + P R P ++ + P V IE
Sbjct: 468 --FYTVCKVGSGFTDADLKKMYEILQP----LKIPHRHPRVSSKMEADVWFVPQVVIEVI 521
Query: 548 EKSIILSI--TSDIRTIRSEVFSAPYSLRFPRID-RVRYDKPWHDCLDVQSFVELVHSSN 604
I LS T + +R V A +RFPR R R DK V +EL
Sbjct: 522 GAEITLSPLHTCCLGAVRPGVGLA---VRFPRFTGRYRTDKGPEQATTVAEMLELYKRQK 578
Query: 605 GTTQ 608
Q
Sbjct: 579 KVAQ 582
>gi|15790019|ref|NP_279843.1| DNA ligase [Halobacterium sp. NRC-1]
gi|169235742|ref|YP_001688942.1| DNA ligase (ATP) [Halobacterium salinarum R1]
gi|14423678|sp|Q9HR35.1|DNLI_HALSA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|224487884|sp|B0R4C9.1|DNLI_HALS3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|10580445|gb|AAG19323.1| DNA ligase [Halobacterium sp. NRC-1]
gi|167726808|emb|CAP13594.1| DNA ligase (ATP) [Halobacterium salinarum R1]
Length = 561
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 207/464 (44%), Gaps = 80/464 (17%)
Query: 141 NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSI-------FHEFHPDAEDLF 193
+++EK+++L L + ++E +++ ++L ++++G+ E ++ F +
Sbjct: 139 SQSEKVTLLFGLFNQCTSREARYLARLVLGEMRIGVGEGAVRDAIAEAFDVPTAAVQRAL 198
Query: 194 NVTCDLKLVCEKLKDRNQRH-KRQDIEVGKAVRPQLAM--RIGDAHAAWRKLHGKEVVIE 250
V+ D LV E +D +EVG+ V+ LA + DA W E +E
Sbjct: 199 QVSNDYGLVAETARDSGTDALDAMGLEVGRPVQAMLAQAGTVTDALDEWH-----EAAVE 253
Query: 251 CKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSL 310
KFDG R+Q+H +G ++ +SR+ + + + + +E NV I+DGE + D
Sbjct: 254 TKFDGARVQVHYDGDDVVLYSRNMENVTGALPELVEFVENNVTA-PVIIDGEAVAADEDG 312
Query: 311 NRFAEFGSNQEIAKAAR-----DGLSSDRQLCYFAFDVLYV----GDTSVIHQSLKERHE 361
+ QEI K R + + + AFD L+ G ++ +RH
Sbjct: 313 DPL----PFQEILKRFRRKHDVAAMREEISVELHAFDCLHAPSADGGEDLLDAPFSDRHR 368
Query: 362 LLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIV 421
L+ VV + E LV D + DE+ F +E EGI+
Sbjct: 369 RLRSVVDDASAVSEVLVTD--------------------DADEIAAFEATALEGGHEGIM 408
Query: 422 LKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERP 481
LK+ + + PGDR WLK KP+ LD+++ G +G GRR + FL++
Sbjct: 409 LKNPAAPYTPGDRGKDWLKRKPDV----ETLDLVVTGAEWGEGRRASVLGTFLLS----- 459
Query: 482 APDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPD 541
A D F + +V TGL+DEEL A+ +L+P+ R S++
Sbjct: 460 ARDAAGDGFETIGKVATGLTDEELAALSDRLEPHVR------------------SEDGQT 501
Query: 542 VWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
V I E +++L + + S +S+ Y+LRFPR VR DK
Sbjct: 502 VDI---EPAVVLEVGYE-EIQASPTYSSGYALRFPRFVSVREDK 541
>gi|119719660|ref|YP_920155.1| ATP-dependent DNA ligase [Thermofilum pendens Hrk 5]
gi|224487899|sp|A1RY72.1|DNLI2_THEPD RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 2
gi|119524780|gb|ABL78152.1| DNA ligase I, ATP-dependent Dnl1 [Thermofilum pendens Hrk 5]
Length = 601
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 140/537 (26%), Positives = 238/537 (44%), Gaps = 73/537 (13%)
Query: 99 APNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLA--SSENRAE-KISVLSTLIKK 155
AP G V Q+++ LT+ ++ L ++A S E E K++ L L++
Sbjct: 106 APGGGLLEFFGTPV-QKKE------LTVSQVYSALMKIAQASGEGAQETKVNTLVALLQD 158
Query: 156 TNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDA----------EDLFNVTCDLKLVCEK 205
+E ++I+ +L L+LGI++ +I E + DL + +
Sbjct: 159 AKPKEARYILRTVLGRLRLGIADMTILDALAAAFAGSKAARDVIERAYTKHPDLGYIAKL 218
Query: 206 LKDRN-QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
L + IEVG V P LA R+ D KL GK + E K+DG+R+Q HK+G
Sbjct: 219 LATKGLDAVASLKIEVGIPVLPMLAERLSDPAEILEKLGGK-CLAEYKYDGERVQAHKSG 277
Query: 265 SEIHYFSRSFLDHSEYGHAMSKIIE--QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEI 322
++ FSR + + H ++E + + V I++GE++ ++ F QE+
Sbjct: 278 DKVLLFSRRLENIT---HHYPDVVEYVKRLKVREAIVEGEIVAYNPDTGEMLPF---QEL 331
Query: 323 AKAAR----DGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLV 378
R + + + + FDV+Y+ +I + L +R +L+K+V
Sbjct: 332 MHRRRKYDVEKAMKEYPVRVYLFDVIYMDGEELIEKPLDQRRLILEKIV----------- 380
Query: 379 PDHGLNSHVRPQGEPCWSL----VAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPG 432
P+G+ L V + ++ FF++ I EG++ K + GS ++ G
Sbjct: 381 ----------PEGDEDILLSTAKVVGDAKDLLHFFEQAISEGCEGVMCKSIGPGSIYQMG 430
Query: 433 DRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFI 491
R W+K K +Y +D +D++++GG++G G+R G L+A A P DT F
Sbjct: 431 ARGWLWIKFKRDYRMEMTDTVDLVVVGGFHGRGKRAGTYGALLMA-AYDPETDT----FK 485
Query: 492 SFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSI 551
+ C+VGTG +DE+L + L P Y+ P R P F ++ + P V +E I
Sbjct: 486 TVCKVGTGFTDEDLAKLPELLDP----YKIPHRHPRVFSKIEADVWFVPAVVLEIIGAEI 541
Query: 552 ILSITSDIRTIRSEVFSAPYSLRFPRID-RVRYDKPWHDCLDVQSFVELVHSSNGTT 607
LS + E A ++RFPR R R+DK +E+ S T
Sbjct: 542 TLSPLHTCALNKLEE-GAGLAIRFPRFTGRYRFDKKPEQATTESELIEMYKSQKKTA 597
>gi|198456070|ref|XP_001360228.2| GA18999 [Drosophila pseudoobscura pseudoobscura]
gi|198135509|gb|EAL24802.2| GA18999 [Drosophila pseudoobscura pseudoobscura]
Length = 744
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 191/421 (45%), Gaps = 67/421 (15%)
Query: 208 DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG-SE 266
D + +R + G +RP LA H + + + E K+DG+R QIH N E
Sbjct: 348 DIKELQERCPMHPGMPLRPMLAQPTKGVHEVFERFGSMHITCEWKYDGERAQIHCNERGE 407
Query: 267 IHYFSRSFLDHS-EYGHAMSKIIEQNVL---VDRCILDGEMLVWDTSLNRFAEFGSNQEI 322
I FSR+ +++ +Y +++ + L V I+D E++ WD + F Q +
Sbjct: 408 ISIFSRNSENNTAKYPDLIAR--SKGFLKGAVQSYIIDSEIVAWDVERKQILPF---QVL 462
Query: 323 AKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVP 379
+ R + + Q+C + FD+LY+ T+++ L ER +LL + + +G +
Sbjct: 463 STRKRKNVDIEEIKVQVCVYIFDLLYINGTTLVTSPLSERRKLLLEHFQEVEGEWKFAT- 521
Query: 380 DHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGK 437
+L +++DEV++F +E+++ EG+++K L + +E RS
Sbjct: 522 ----------------ALDTNDMDEVQQFLEESVKGNCEGLMVKTLDEEATYEIAKRSRN 565
Query: 438 WLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRV 496
WLKLK +Y+ G LD+++IGGY G GRR G FL+A DT + S C++
Sbjct: 566 WLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGTYGGFLLACY-----DTENEEYQSICKI 620
Query: 497 GTGLSDEEL--------DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE 548
GTG +DE+L V+ K YFR +S PD W E +
Sbjct: 621 GTGFTDEDLRIHSEFLGKHVIPSAKSYFRY----------------DSSLEPDHWFEPAQ 664
Query: 549 ----KSIILSITSDIRTIRSEVFSA-PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSS 603
K LS++ R V + SLRFPR R+R DK + D + S
Sbjct: 665 VWEVKCADLSLSPIHRAAIGIVDTERGISLRFPRFIRIRDDKSSENATDANQVAHMYQSQ 724
Query: 604 N 604
+
Sbjct: 725 D 725
>gi|126458667|ref|YP_001054945.1| ATP-dependent DNA ligase [Pyrobaculum calidifontis JCM 11548]
gi|166215376|sp|A3MS62.1|DNLI_PYRCJ RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|126248388|gb|ABO07479.1| DNA ligase I, ATP-dependent Dnl1 [Pyrobaculum calidifontis JCM
11548]
Length = 583
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 162/621 (26%), Positives = 262/621 (42%), Gaps = 88/621 (14%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKESVL 70
VL ++ + Q+T S F+K D + YF L P E G+ E +
Sbjct: 9 VLAAVESTTQRTTMVKLLTSLFKKAKPEEIDKIVYFILGDLRPPW---EGVELGVAEKLC 65
Query: 71 ANCLIDALGMSKDSADAVRLINWRKGGA--------APNAGNFPMVAAEVLQRRQGMISG 122
+ A G+S A L W K A AG P + A Q+
Sbjct: 66 IRAISKATGLS-----AAELEGWYKKSGDVGEVARRALAAGKRPTLLAFAQQKP------ 114
Query: 123 GLTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEK 179
L + E+ D L ++A + K+S+LS+L + + +E K+I ++ L+LG+++
Sbjct: 115 -LEVAEVYDTLLKVAKAAGEGAQDLKVSLLSSLFSRASPEEAKYIARFVVGKLRLGVADM 173
Query: 180 SIFHE----FHPDAEDL---FNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRI 232
++ F E L ++V DL + + + + + I G V P LA R+
Sbjct: 174 TLIEALSEAFGVSKEGLERAYHVYPDLGRLARHVAE-GRPLEEIKITPGVPVLPMLAQRL 232
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNV 292
A KL G + E K+DG+R QIH + FSR D + ++K +++ V
Sbjct: 233 SSASEILAKLGGT-AICEYKYDGERAQIHLREGSVKIFSRRLEDITHAYPDVAKAVKEAV 291
Query: 293 LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCY----FAFDVLYVGD 348
IL+GE++ D F QE+ R ++ Y + FD+LYV
Sbjct: 292 KAREAILEGEIVAVDPDTGEMLPF---QELMHRKRKHDVAEAMEAYPAVLYLFDLLYVDG 348
Query: 349 TSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKF 408
+ Q L R L +VV + G + ++ G + ++V+ F
Sbjct: 349 EDLTTQPLIYRRLRLSEVV------------EEGGDVYIAKWG------MFDGAEDVDLF 390
Query: 409 FKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRG 467
F E + EG++ K S +E G R W+K K +Y D +D++++G ++G G+R
Sbjct: 391 FHEAVSLGTEGLICKSPTSTYEMGARGWNWIKYKRDYRSEMIDTVDLVVVGAFHGRGKRA 450
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G FL+A A P+ D F + C+VG+G +D +L + L+P + +P+
Sbjct: 451 GLYGAFLLA-AYDPSTDM----FYTVCKVGSGFTDADLRRMYDMLQPLKIPHRHPRVV-- 503
Query: 528 SFYQVTNNSKERPDVW------IESPEKSIILSI--TSDIRTIRSEVFSAPYSLRFPRID 579
SK +PDVW IE I LS T I ++ V A +RFPR
Sbjct: 504 --------SKMQPDVWFVPQVVIEVIGAEITLSPLHTCCIGAVKPGVGLA---IRFPRFT 552
Query: 580 -RVRYDKPWHDCLDVQSFVEL 599
R R DK D + VE+
Sbjct: 553 GRYRTDKRPEDATTTKELVEM 573
>gi|403214978|emb|CCK69478.1| hypothetical protein KNAG_0C03740 [Kazachstania naganishii CBS
8797]
Length = 727
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 139/553 (25%), Positives = 251/553 (45%), Gaps = 84/553 (15%)
Query: 103 GNFPMVAAEVLQRRQGMISGG-LTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNA 158
G+ +A E + + M LT+ E+ L +ASS+ ++ +KI ++ ++
Sbjct: 212 GDLGQIALEARKVQPTMFKPKPLTVGEVFQNLKSIASSQGKDSQTKKIKLIKRMLTSCQG 271
Query: 159 QEMKWIIMIILKDLKLGISEKSIF---------HEFHP-----DAEDLFNVTCDLK-LVC 203
E K++I + L++G++EK++ +E+ D E + N ++ C
Sbjct: 272 VEAKFLIRSLESKLRIGLAEKTVLISLSKALLVYEYGESDKDIDMETVENAEQKIRDAFC 331
Query: 204 -----EKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAA------WRKLHGKEVVIECK 252
E + D +H +++ ++RP + ++ A + + ++ E K
Sbjct: 332 QVPNYEVVIDSCLKHGIMNLDQHCSLRPAIPLKPMLAKPTKSISEIFDRFQDQKFTCEYK 391
Query: 253 FDGDRIQIH--KNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVD-----RCILDGEMLV 305
+DG+R Q+H ++G+ + +SR+ + +E +I ++ + D ILD E +
Sbjct: 392 YDGERAQVHLLEDGT-MRIYSRNGENMTE---RYPEIHIRDFVTDLSHTKSLILDCEAVA 447
Query: 306 WDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHEL 362
WD N+ F Q ++ R + + ++C FAFD+L D +I++SL+ER ++
Sbjct: 448 WDKEQNKILPF---QVLSTRKRKDVDINEIKVRVCLFAFDILLHNDEKLINKSLQERRDI 504
Query: 363 LQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVL 422
L + K G + + N++E++ F ++++N EG+++
Sbjct: 505 LHSITKEVTGEFQFAT-----------------EMTTTNLEELQSFLDQSVKNSCEGLMV 547
Query: 423 KDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALA 478
K L S +EP RS WLKLK +Y+ G LD+ ++G Y+G G+R G FL+
Sbjct: 548 KMLEGEESHYEPSKRSRNWLKLKKDYLAGVGDSLDLCVLGAYFGRGKRTGNYGGFLLGCY 607
Query: 479 ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKE 538
+ DT F + C++GTG SDE L + +LK + PK V + S E
Sbjct: 608 NQ---DT--GEFETACKIGTGFSDEVLQQLHERLKSTV--IDLPKAT-----YVFDPSAE 655
Query: 539 RPDVWIESPEKSIILSI---TSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQS 595
PDVW E +L+ S + S + SLRFPR R+R DK D +
Sbjct: 656 -PDVWFEPTLLFEVLTADLSLSPVYKAGSSTYDKGVSLRFPRFLRLREDKGVEDATSSEQ 714
Query: 596 FVELVHSSNGTTQ 608
VE+ + Q
Sbjct: 715 IVEMYENQANLQQ 727
>gi|352683054|ref|YP_004893578.1| DNA ligase [Thermoproteus tenax Kra 1]
gi|350275853|emb|CCC82500.1| DNA ligase [Thermoproteus tenax Kra 1]
Length = 592
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 139/535 (25%), Positives = 239/535 (44%), Gaps = 83/535 (15%)
Query: 110 AEVLQRRQGMISGGLTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIM 166
A+ L G L+I ++ D ++A + K+S+LS+L + + +E K+I
Sbjct: 103 AQTLLAFAGAKRAPLSISQVYDTFLKIARTTGEGSIDLKVSLLSSLFSQASPEEAKYIAR 162
Query: 167 IILKDLKLGISEKSIF----HEFHPDA---EDLFNVTCDLKLVCEKLKDRNQRHKRQ-DI 218
++ L+LG+++ +I F+ D E +N+ DL + + + +R Q Q +
Sbjct: 163 FVVGKLRLGVADMTIIDALAEAFNVDEGQLEKAYNIHPDLGYLAKVVLERGQAGLAQVRV 222
Query: 219 EVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS 278
G V P LA R+ +H KL G + E K+DG+R QIH + I +SR + +
Sbjct: 223 TPGVPVMPMLAQRLSTSHEVLTKLGGA-AICEYKYDGERAQIHIGPNGISIYSRRLENIT 281
Query: 279 EYGHAMSKIIE---QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQ 335
HA ++E ++V I++GE++ D F QE+ R +
Sbjct: 282 ---HAYPDVVEAVRRSVSAKEAIIEGEIVALDPDTGDILPF---QELMHRKRKHEVEEAM 335
Query: 336 LCYFA----FDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
Y FDV+Y+ + + L R L ++V+ S+ + ++
Sbjct: 336 REYPVKLNLFDVIYLDGEDLTDKPLIYRRLKLSEIVRESE---DVVIAK----------- 381
Query: 392 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD 451
W+L + ++V+ FF E I EG+V K S +E G R W+K K +Y SD
Sbjct: 382 ---WALF-DDEEKVDLFFHEAISMGMEGLVCKSPTSLYEMGARGWNWIKYKRDYRSEMSD 437
Query: 452 -LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVT 510
+D++++G +YG G+R G FL+A A P D F + C+VG+G +D +L +
Sbjct: 438 TVDLVVVGAFYGRGKRAGLYGAFLMA-AYDPKTDM----FYTVCKVGSGFTDADLKKMYQ 492
Query: 511 KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 570
L+PY + +P+ +S+ PDVW +P I+L I I +E+ +P
Sbjct: 493 MLEPYKIDHRHPR----------VSSRMEPDVWF-TP--GIVLEI------IGAEITLSP 533
Query: 571 --------------YSLRFPRID-RVRYDKPWHDCLDVQSFVELVHSSNGTTQKG 610
++RFPR R R DK + V +E+ + +G
Sbjct: 534 LHTCCQGAIKPDVGLAIRFPRFTGRYRSDKGPEEATTVDELLEIYRNQKKVKLEG 588
>gi|70947733|ref|XP_743454.1| DNA ligase 1 [Plasmodium chabaudi chabaudi]
gi|56522958|emb|CAH76291.1| DNA ligase 1, putative [Plasmodium chabaudi chabaudi]
Length = 433
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 193/407 (47%), Gaps = 43/407 (10%)
Query: 208 DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSE 266
D N K+ ++ G V+P LA + + E K+DG+R QIH +
Sbjct: 40 DMNVLMKKCTVKTGVPVQPMLAKPTKGIQEVLDRFNNVTFTCEYKYDGERAQIHYIDKDN 99
Query: 267 IHYFSRSFLDHSEYGHAMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAK 324
I FSR+ +E + +I++ ++ V I+D E++ +D + F +
Sbjct: 100 IKIFSRNLETMTEKYPDVIQIVKDQIMPGVTESIIDSEVVAYDIENKKILPFQILTTRKR 159
Query: 325 AARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLN 384
D + ++C F FD++ VI + L+ R +LL ++K +G LE + +
Sbjct: 160 KDVDIENIKVKICLFPFDLICCNGVPVIKEPLEIRRKLLYSLLKCKEGVLE-----YATH 214
Query: 385 SHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLK 442
S + +N+++++ F ++ IEN EG+++K L + +EP RS WLK+K
Sbjct: 215 SEM------------NNIEDIDMFLQDAIENSCEGLMVKTLLDNASYEPSRRSLNWLKVK 262
Query: 443 PEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLS 501
+YI SD +D++ I GYYG G+R G F++A A ++ F + C+ GTG S
Sbjct: 263 KDYIEGLSDSVDLVPIAGYYGKGKRSGVYGAFVLA-----AYNSETENFQTVCKAGTGFS 317
Query: 502 DEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITS 557
DE L+A+ L P + S+Y+V++ K PDVW ++ K+ LS+ S
Sbjct: 318 DEILNALHESLSDKI----IPNKK--SYYEVSD--KLNPDVWFDAHYVWEIKAADLSL-S 368
Query: 558 DIRTIRSEVFS--APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
+ T V+S LRFPR R+R DK Q VE +
Sbjct: 369 PVHTAAIGVYSDDKGIGLRFPRFLRLRDDKNPEQATTTQQIVEFYEA 415
>gi|238493649|ref|XP_002378061.1| DNA ligase Cdc9, putative [Aspergillus flavus NRRL3357]
gi|220696555|gb|EED52897.1| DNA ligase Cdc9, putative [Aspergillus flavus NRRL3357]
Length = 953
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 132/528 (25%), Positives = 224/528 (42%), Gaps = 93/528 (17%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH------PDAEDLFNVTCDL 199
K E K+I+ + L+LG++EK++ HE P E L L
Sbjct: 453 KGGPSEAKYIVRFLEGKLRLGLAEKTVLVALAQAVVTHEAALKGEKAPSPEKLAEGEAIL 512
Query: 200 KLVCEKL------------KDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEV 247
K V +L ++ H+ ++ G ++P LA + GKE
Sbjct: 513 KTVYSELPAYEIIIPAMLKNGLSKLHEACKLQPGIPIKPMLAKPTKSITEVLDRFEGKEF 572
Query: 248 VIECKFDGDRIQIHKNGSE-IHYFSRSFLDHSEYGHAMSKIIEQN----------VL--- 293
E K+DG+R QIH + H + + + G ++ I +N VL
Sbjct: 573 TCEYKYDGERAQIHYVAPDATHNYPEAQHTLQKDGKGLAAIFSRNSEDLSKKYPDVLAKL 632
Query: 294 -------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVL 344
V +LD E + WDT + F Q + + +D + D ++ C FAFD+L
Sbjct: 633 DSWIKDGVKSFVLDCETVAWDTVNKKVLPF--QQLMTRKRKDVKAEDVKVKVCVFAFDLL 690
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
++ + +SL+ER ELL + + ++G + G N++V +DE
Sbjct: 691 FLNGEPTVKKSLRERRELLHESFQVTEGEFQ--FAQFG-NTNV--------------LDE 733
Query: 405 VEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 460
+++ ++++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G Y
Sbjct: 734 IQELLDDSVKASCEGLMVKMLDTDESGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVLGAY 793
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
YG G+R FL+A A + + + S C +GTG S+ L+ + +L P +
Sbjct: 794 YGRGKRTSVYGAFLLA-----AYNANTQTYESICNIGTGFSEANLEELHKELSPLV--ID 846
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEV-----FSAPY 571
PK FY + K++PDVW E K+ L+++ + E
Sbjct: 847 RPK----PFYTHSTVPKDQPDVWFEPRLVWEVKTADLTLSPRYQAAADEFVGTTGGGKGV 902
Query: 572 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
SLRFPR + R DK + E+ ++ G+ DD
Sbjct: 903 SLRFPRFIKAREDKKPEQATTTRQVAEMYRKQEAVAKENAGKKGVDDD 950
>gi|170083931|ref|XP_001873189.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650741|gb|EDR14981.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 816
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 191/422 (45%), Gaps = 79/422 (18%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHSE 279
G ++P LA + K E K+DG+R Q+HK + FSR+ D S+
Sbjct: 434 GVPLKPMLAKPTKAIGEVLDRFENKRFTCEYKYDGERAQVHKLEDGTVDVFSRNSEDMSK 493
Query: 280 YGHAMSKIIEQNVLVDRCI--------LDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS 331
+++Q + RCI LD E + D + F QE+++ R +
Sbjct: 494 ---KYPDLVDQ---LPRCIKESTKSFVLDAEAVAIDRLTGKLMPF---QELSRRKRKDVK 544
Query: 332 SDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVR 388
+ Q+C FAFD+LY+ ++ + L ER ELL++ P G D +S
Sbjct: 545 VEDIQVQVCLFAFDLLYLNGEPLLQRPLYERRELLRQYFTPVPGEF-----DFAKSSD-- 597
Query: 389 PQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEY 445
+ +E++ F +E++++ EG+++K L S +EP RS WLKLK +Y
Sbjct: 598 ----------SETTEEIQTFLEESVKDGCEGLMVKMLDSDASYYEPSRRSVNWLKLKKDY 647
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD++++GGYYG G+R FL+A D+ + + C++GTG S+E
Sbjct: 648 LAGVGDSLDLVVVGGYYGKGKRTNVYGAFLLACY-----DSESEEYQTICKIGTGFSEEN 702
Query: 505 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRT 561
L A LKP +V + K +PD+W E K + +T+D+
Sbjct: 703 LQAHYDALKPL------------ETTKVRGDIKVGGAKPDIWFEP--KIVWEVLTADLSL 748
Query: 562 IRSEVFSAP--------YSLRFPRIDRVRYDKPWHDCLDVQSFVEL-----VHSSNGTTQ 608
S +++A SLRFPR RVR DK D + E+ + SNG +
Sbjct: 749 --SPIYTAAQGLVEDRGISLRFPRFIRVRDDKGPDDATGPEQIAEMYERQALAQSNGKKK 806
Query: 609 KG 610
KG
Sbjct: 807 KG 808
>gi|348520056|ref|XP_003447545.1| PREDICTED: DNA ligase 1-like [Oreochromis niloticus]
Length = 1044
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 145/602 (24%), Positives = 252/602 (41%), Gaps = 97/602 (16%)
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGM---- 119
G+ E+VL + A G D A A G+ +VA ++ M
Sbjct: 476 GVGETVLMKAVAQATGRQLDKIKA----------EAQEKGDLGLVAESSRSNQRMMFQPA 525
Query: 120 -ISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE 178
++ G ++L ++ ++ + +KI ++ L E ++I+ + L++G++E
Sbjct: 526 SLTAGGVFRKLKEIAS-MSGNSAMNKKIDIIKGLFVACRFSEARYIVRSLAGKLRIGLAE 584
Query: 179 KSIF-------------HEFHPDAED--------------------LFNVTCDLK----L 201
+S+ F P D L C++ L
Sbjct: 585 QSVLSALSQAVCLTPPGQGFPPAVIDAGKGMSAESRRAWIEEKSLILKQTYCEMPNYDVL 644
Query: 202 VCEKLKDR-NQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQI 260
+ LK+ +Q + G +RP LA +K E K+DG+R QI
Sbjct: 645 IPVLLKEGIDQLPNHCKLTPGVPLRPMLAHPTKGVGEVMKKFDEAAFTCEYKYDGERAQI 704
Query: 261 H-KNGSEIHYFSRSFLDH-SEYGHAMSKI--IEQNVLVDRCILDGEMLVWDTSLNRFAEF 316
H E+ FSR+ D+ S+Y +S+I ++++ +V C+LD E + WD + F
Sbjct: 705 HILESGEVRIFSRNQEDNTSKYPDIISRIPKVKKDSVVS-CVLDTEAVAWDHEKKQIQPF 763
Query: 317 GSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLET 376
+ D Q+C +AFD+LY+ S++ Q L R LL++ +G
Sbjct: 764 QVLTTRKRKDVDASEIKVQVCVYAFDLLYLNGESLVRQPLCRRRALLRESFSEVEGEFVF 823
Query: 377 LVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDR 434
S+ + N D + +F ++++ + EG+++K L + +E R
Sbjct: 824 -----------------ARSIDSDNTDTIAEFLEQSVRDSCEGLMVKTLEKDATYEIAKR 866
Query: 435 SGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISF 493
S WLKLK +Y+ G +D+ +IG Y G G+R G FL+A D F S
Sbjct: 867 SHNWLKLKKDYLEGVGDTVDLCVIGAYLGKGKRTGTYGGFLLACY-----DEENEEFQSV 921
Query: 494 CRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----K 549
C++GTG DE+L+ + +++ PK P ++Y+V +++ PDVW+++ + K
Sbjct: 922 CKIGTGFKDEDLEQHYK----FLKEHILPK--PRAYYRVDQSAE--PDVWLDAVQVWEVK 973
Query: 550 SIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 608
LS++ + V SLRFPR R+R DK D EL
Sbjct: 974 CADLSLSPVYKAAMGMVDPEKGISLRFPRFLRIRDDKKPEDATAAAQIAELYKKQQQIQN 1033
Query: 609 KG 610
+G
Sbjct: 1034 QG 1035
>gi|171184553|ref|YP_001793472.1| ATP-dependent DNA ligase [Pyrobaculum neutrophilum V24Sta]
gi|224487911|sp|B1YA52.1|DNLI_THENV RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|170933765|gb|ACB39026.1| DNA ligase I, ATP-dependent Dnl1 [Pyrobaculum neutrophilum V24Sta]
Length = 584
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 153/567 (26%), Positives = 243/567 (42%), Gaps = 65/567 (11%)
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGG 123
G+ E + + A G +AV +++ G A + AA +R G+++ G
Sbjct: 59 GVAEKLCLRAVSKAAGTPLSELEAV----YKRTGDVGEAARRALSAA----KRPGLLAFG 110
Query: 124 ----LTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKDLKLGI 176
L + E+ D L ++A + KIS+L++L + +E K+I ++ L+LG+
Sbjct: 111 QQKPLEVSEVYDTLLKVAKAAGEGAQDMKISLLASLFARATPEEAKYIARFVVGKLRLGV 170
Query: 177 SEKSIFHE----FHPDAEDL---FNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLA 229
++ ++ F E L ++V D+ + + + + + I G V P LA
Sbjct: 171 ADMTLLEALSEAFGVGKEALERAYHVWPDMGKLARHVAE-GRPLEEVKITPGVPVLPMLA 229
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE 289
R+ A KL G V E K+DG+R QIH +G + FSR D + + K ++
Sbjct: 230 QRLSSASEILAKLGGA-AVCEYKYDGERAQIHISGGSVKIFSRRLEDITHAYPDVVKAVK 288
Query: 290 QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFA----FDVLY 345
++V IL+GE++ D F QE+ R + Y A FDVLY
Sbjct: 289 ESVAAGEAILEGEIVAVDPDTGDMLPF---QELMHRKRKHEVAAAVESYPAVLNLFDVLY 345
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
+ + + L R L +VV ++ S R W L + EV
Sbjct: 346 LDGEDLTGEPLIYRRLRLSEVVHETEK-----------VSIAR------WRLF-DDPGEV 387
Query: 406 EKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSG 464
+ FF E + EG+V K S +E G R W+K K +Y D +D++++G +YG G
Sbjct: 388 DVFFHEAVSLGMEGLVCKSPTSIYEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFYGRG 447
Query: 465 RRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 524
+R G FL+A A D F + C+VG+G +D +L + L+P Y+ P R
Sbjct: 448 KRAGLYGAFLLA-----AYDPQTDMFYTVCKVGSGFTDADLKKMYEVLQP----YKIPHR 498
Query: 525 APPSFYQVTNNSKERPDVWIESPEKSIILSI--TSDIRTIRSEVFSAPYSLRFPRID-RV 581
P ++T + P V IE I LS T + +R V A +RFPR R
Sbjct: 499 HPRVVSKMTPDVWFTPQVVIEVIGAEITLSPLHTCCLGAVRPGVGLA---IRFPRFTGRY 555
Query: 582 RYDKPWHDCLDVQSFVELVHSSNGTTQ 608
R DK VEL Q
Sbjct: 556 RTDKSPEQATTPAEMVELYKRQKKVAQ 582
>gi|195028338|ref|XP_001987033.1| GH20192 [Drosophila grimshawi]
gi|193903033|gb|EDW01900.1| GH20192 [Drosophila grimshawi]
Length = 674
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 130/449 (28%), Positives = 203/449 (45%), Gaps = 79/449 (17%)
Query: 199 LKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRI 258
LK E+L++R H G +RP LA H + G + E K+DG+R
Sbjct: 275 LKYDIEELQERCPMHP------GMPLRPMLAQPTKGVHEVLERFSGMHITCEWKYDGERA 328
Query: 259 QIHKN-GSEIHYFSRSFLDHS-EYGH--AMSKIIEQNVLVDRCILDGEMLVWDTSLNRFA 314
QIH N EI FSR+ +++ +Y A SK I + V ILD E++ WD +
Sbjct: 329 QIHLNEQGEISIFSRNSENNTPKYPDLIARSKPILKTE-VKSYILDSEIVAWDIERKQIL 387
Query: 315 EFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSK 371
F Q ++ R + D Q+C + FD+LY+ S++ Q L ER ++L + + +
Sbjct: 388 PF---QILSTRKRKNVDIDDIKVQVCVYIFDLLYINGKSLVTQPLSERRKILFEHFQEVE 444
Query: 372 GRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKW 429
G + +L +++DEV++F +E+I+ EG+++K L + +
Sbjct: 445 GEWKFAT-----------------ALNTNDMDEVQQFLEESIKGNCEGLMVKTLDEEATY 487
Query: 430 EPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPR 488
E RS WLKLK +Y+ G LD+++IGGY G GRR G FL+A DT
Sbjct: 488 EIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGIYGGFLLACY-----DTDNE 542
Query: 489 RFISFCRVGTGLSDEEL--------DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERP 540
+ + C++GTG +DE+L +++ K YFR +S P
Sbjct: 543 EYQTICKIGTGFTDEDLRQHSEFFSTNKLSEAKSYFRY----------------DSSLEP 586
Query: 541 DVWIESPE----KSIILSIT----SDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLD 592
D W E + K LS++ + I + +E SLRFPR R+R DK + D
Sbjct: 587 DDWFEPCQVWEVKCADLSLSPIHRAGIGIVDAE---RGISLRFPRFIRIRDDKSPENATD 643
Query: 593 VQSFVELVHSSN--GTTQKGKEYGGLQDD 619
+ S + QK L+ D
Sbjct: 644 ANQVAHMYSSQDVVKNNQKSSNSMDLESD 672
>gi|392863744|gb|EAS35487.2| DNA ligase I, ATP-dependent (dnl1) [Coccidioides immitis RS]
Length = 969
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 136/531 (25%), Positives = 221/531 (41%), Gaps = 99/531 (18%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEF------HPDAEDLFNVTCDL 199
K E K+I+ + L+LG+++K++ HE P AE L L
Sbjct: 469 KGGPSEAKYIVRFLEGKLRLGLADKTVLVALAHAMVAHETLSKGNKTPSAEQLAKGEAIL 528
Query: 200 KLVCEKLKDRN------------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEV 247
K V +L + ++ G ++P LA + GK+
Sbjct: 529 KQVYSELPSYEVIIPAMLEHGIFNLQENCKLQPGVPLKPMLAKPTKSISEVLDRFEGKDF 588
Query: 248 VIECKFDGDRIQIHKNGSE-IHYFSRSFLDHSEYGHAMSKIIEQNV---------LVDRC 297
E K+DG+R QIH + I ++ + + G + I +N ++D+
Sbjct: 589 TCEYKYDGERAQIHYVSQDAIKDYTATAGTLQKDGKGLCAIFSRNSEDLSKKYPDVLDKL 648
Query: 298 -----------ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD--RQLCYFAFDVL 344
+LD E + WD + F Q + + +D + D ++C FAFD+L
Sbjct: 649 ESWVQPGTKSFVLDCETVAWDLENKKVLPF--QQLMTRKRKDVKAEDIKVRVCIFAFDIL 706
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
++ + + +ER LL + P++G E +G S NV+E
Sbjct: 707 FLNGAPTVKMTFRERRALLHETFVPTEG--EFAFAQYGNTS---------------NVEE 749
Query: 405 VEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 460
++ E++++ EG+++K L S +EP RS WLK+K +Y+ G LD+++IG Y
Sbjct: 750 IQTLLDESVKSSCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGIGDSLDLVVIGAY 809
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
+G G+R FL+A A P+ + Y + C +GTG SD LD + L P
Sbjct: 810 FGKGKRTSVYGAFLLA-AYNPSTENYE----TICNIGTGFSDALLDELHKSLSPLAISQP 864
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP------ 570
P FY ++ K++PDVW E K+ L+I+ R EV
Sbjct: 865 KP------FYSHSSVPKDQPDVWFEPRLVWEVKAADLTISPRYRCASDEVMGMAGADGKG 918
Query: 571 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ--KGKEYGGLQDD 619
SLRFPR + R DK + E+ T+ KGK G+ DD
Sbjct: 919 VSLRFPRYIKARDDKKPDQASTTRMVAEMYRKQESVTKEDKGK---GVDDD 966
>gi|328772647|gb|EGF82685.1| hypothetical protein BATDEDRAFT_9401 [Batrachochytrium
dendrobatidis JAM81]
Length = 621
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 135/537 (25%), Positives = 226/537 (42%), Gaps = 90/537 (16%)
Query: 125 TIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHE 184
T+KE+ ++ + SS+ R KI+++ ++ E K++I + L++G++E+++
Sbjct: 112 TLKEICNISGQ--SSQQR--KINIIQKMLVSCQGSEAKYLIRSLEGKLRIGLAEQTVLTS 167
Query: 185 F-HPDAEDLFNVTCDLKLVCEK----LKDRN--------------------------QRH 213
H A N + +K+ EK L D +
Sbjct: 168 LAHASA---LNESTTIKMSTEKKAALLADATVMIKSVYSAIPSYDAIIPVLLKYGFKELS 224
Query: 214 KRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK--NGSEIHYFS 271
+ G ++P LA + G E K+DG+R QIH+ +G I Y
Sbjct: 225 THCHMTPGIPMKPMLAHPTKSLSEVLDRFDGMAFTCEYKYDGERAQIHRLEDGQVIIYSR 284
Query: 272 RSFLDHSEYGHAMSKIIEQNVLVDRC-------ILDGEMLVWDTSLNRFAEFGSNQEIAK 324
S +Y + +I + D C +LD E + WD F Q ++
Sbjct: 285 NSENLSGKYPEVLERIPKVWHFYD-CMENIKSFVLDCEAVAWDVQKECILPF---QVLST 340
Query: 325 AARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
R + SD Q+C FAFD+LY+ S+I ++LK R ELL + G+ +
Sbjct: 341 RKRKDVKSDDVQVQVCIFAFDLLYLNGQSMITETLKRRRELLHENFVEVDGQFQ------ 394
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWL 439
H + +++VDE++ F ++I EG+++K L + +EP RS WL
Sbjct: 395 -FAKH----------MTSNSVDEIQIFLDDSIVGNCEGLMVKTLEKEASYEPSKRSRNWL 443
Query: 440 KLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
K+K +Y+ G LD+++IGG+ G G+R G +L+A + PD + + C++GT
Sbjct: 444 KVKKDYVNGLGDSLDLVVIGGFIGRGKRTGWYGGYLLACFD---PDR--EEYQTICKIGT 498
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G S+E L K + P +Y+ + RPDVW E + I +
Sbjct: 499 GFSEEALAEQAESFKSHIIS------KPKPYYRFGDGPNVRPDVWFEPTQVWEIKAADLS 552
Query: 559 IRTIRSEVFS-----APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG 610
I + SLRFPR RVR DK E+ ++ N T +
Sbjct: 553 ISPVHQAAVGLVDPQKGISLRFPRFIRVRDDKSPEQATSASQIAEMYNAQNINTNEA 609
>gi|336476629|ref|YP_004615770.1| ATP-dependent DNA ligase I [Methanosalsum zhilinae DSM 4017]
gi|335930010|gb|AEH60551.1| DNA ligase I, ATP-dependent Dnl1 [Methanosalsum zhilinae DSM 4017]
Length = 569
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 145/621 (23%), Positives = 278/621 (44%), Gaps = 90/621 (14%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSL--DRERGSYGLKESV 69
LV L+ ++ T K F + D D +A L+L ++ + E G++E +
Sbjct: 7 LVELYVEMENTSSHKKIVGLLTSFFRS-LDPDDVRTAAYLVLGTVGPEYEDTELGIREKL 65
Query: 70 LANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIKEL 129
+ DA G+S+ + + G+ A E + + LTI+++
Sbjct: 66 AIRSIADAFGISRQKVEK----------TYSDTGDLGDAAFEFSSNK----NSDLTIRDV 111
Query: 130 NDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHE-- 184
D L ++ ++ ++ +KI +L+ ++ + +A E K+I+ I L +L+LG E+ +
Sbjct: 112 MDCLTQIKNTSGEGSQQKKIELLAEILARASAMEAKYIMRITLGELRLGFGEQFVLSALA 171
Query: 185 --FHPD------AEDLFNVTCDLKLVCEKLKDRNQRH-KRQDIEVGKAVRPQLAMRIGDA 235
F D E+ +NV D+ + E + + KR +++G+ VR LA R+ D
Sbjct: 172 MAFTGDDKNTVYLEEAYNVCTDIGQLAESVSEYGLASIKRFSVKIGRPVRSMLAKRV-DK 230
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVD 295
+++ E K+DG+RIQ+H I FSR + ++ + +++++ +
Sbjct: 231 FENLNDKFPEQMAAEEKYDGERIQVHIINENIQIFSRRLDNITDQFPDVVDAVKKHIKAE 290
Query: 296 RCILDGEMLVW-DTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQ 354
+ +LDGE++ + + ++N F E Q K + + + FD++Y+ S +
Sbjct: 291 KAVLDGEVIAFRNENINSFQEL--MQRRRKYDVEEYVDKVPVVAYMFDIIYLNGKSYLKV 348
Query: 355 SLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIE 414
R L++ ++ N +R V+ + +E+ FF I+
Sbjct: 349 PYPHRRTALEEHLEE--------------NEKIR----LVERTVSADFNEIRSFFDRCID 390
Query: 415 NRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVA 471
EGI++K + S ++PG R W+K K EY D D++I+G Y G G+R G
Sbjct: 391 KGLEGIIIKSVADNSFYQPGKRGWLWVKWKKEYAEDVRDTFDLIIVGFYSGKGKRQGLFG 450
Query: 472 QFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQ 531
L A+ + ++ +F RVGTG +D++L+ + L + K+ PP+
Sbjct: 451 SLLCAVLNKE-----KNQYETFTRVGTGFTDQDLEEISELLNK-----KKIKKKPPN--- 497
Query: 532 VTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP------------YSLRFPRID 579
+ + PD +I+ S+++ + + S+V +P Y+LRFPR
Sbjct: 498 LVVEKEMVPDSYIDP---SVVIEV------LGSQVTESPHHTAGKNKSDKGYALRFPRFL 548
Query: 580 RVRYDKPWHDCLDVQSFVELV 600
R+RYDK D ++ L+
Sbjct: 549 RMRYDKGPLDVTTIEEVRNLL 569
>gi|303312547|ref|XP_003066285.1| ATP-dependent DNA ligase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240105947|gb|EER24140.1| ATP-dependent DNA ligase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320033623|gb|EFW15570.1| DNA ligase [Coccidioides posadasii str. Silveira]
Length = 969
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 136/531 (25%), Positives = 221/531 (41%), Gaps = 99/531 (18%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEF------HPDAEDLFNVTCDL 199
K E K+I+ + L+LG+++K++ HE P AE L L
Sbjct: 469 KGGPSEAKYIVRFLEGKLRLGLADKTVLVALAHAMVAHETLSKGNKTPSAEQLAKGEAIL 528
Query: 200 KLVCEKLKDRN------------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEV 247
K V +L + ++ G ++P LA + GK+
Sbjct: 529 KQVYSELPSYEVIIPAMLEHGIFNLQENCKLQPGVPLKPMLAKPTKSISEVLDRFEGKDF 588
Query: 248 VIECKFDGDRIQIHKNGSE-IHYFSRSFLDHSEYGHAMSKIIEQNV---------LVDRC 297
E K+DG+R QIH + I ++ + + G + I +N ++D+
Sbjct: 589 TCEYKYDGERAQIHYVSQDAIKDYTATAGTLQKDGKGLCAIFSRNSEDLSKKYPDVLDKL 648
Query: 298 -----------ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD--RQLCYFAFDVL 344
+LD E + WD + F Q + + +D + D ++C FAFD+L
Sbjct: 649 ESWVRPGTKSFVLDCETVAWDLENKKVLPF--QQLMTRKRKDVKAEDIKVRVCIFAFDIL 706
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
++ + + +ER LL + P++G E +G S NV+E
Sbjct: 707 FLNGAPTVKMTFRERRALLHETFVPTEG--EFAFAQYGNTS---------------NVEE 749
Query: 405 VEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 460
++ E++++ EG+++K L S +EP RS WLK+K +Y+ G LD+++IG Y
Sbjct: 750 IQTLLDESVKSSCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGIGDSLDLVVIGAY 809
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
+G G+R FL+A A P+ + Y + C +GTG SD LD + L P
Sbjct: 810 FGKGKRTSVYGAFLLA-AYNPSTENYE----TICNIGTGFSDALLDELHKSLSPLAISQP 864
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP------ 570
P FY ++ K++PDVW E K+ L+I+ R EV
Sbjct: 865 KP------FYSHSSVPKDQPDVWFEPRLVWEVKAADLTISPRYRCASDEVMGMAGADGKG 918
Query: 571 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ--KGKEYGGLQDD 619
SLRFPR + R DK + E+ T+ KGK G+ DD
Sbjct: 919 VSLRFPRYIKARDDKKPDQASTTRMVAEMYRKQESVTKEDKGK---GVDDD 966
>gi|294495245|ref|YP_003541738.1| DNA ligase I, ATP-dependent Dnl1 [Methanohalophilus mahii DSM 5219]
gi|292666244|gb|ADE36093.1| DNA ligase I, ATP-dependent Dnl1 [Methanohalophilus mahii DSM 5219]
Length = 561
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 130/500 (26%), Positives = 219/500 (43%), Gaps = 79/500 (15%)
Query: 123 GLTIKELNDLLDRLASSENR---AEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE- 178
G+ IKE+ + +A + + KI L L E +++ + ++ L++G+ E
Sbjct: 118 GMEIKEVYERFTHIADTAGKRSHGTKIKNLQYLFNSATPIEARYLARLAIEQLRIGVGEG 177
Query: 179 ---KSIFHEFHPDA---EDLFNVTCDLKLVC-EKLKDRNQRHKRQDIEVGKAVRPQLAMR 231
+I F D E +T DL LV N+ ++ DI++ + V+ LA
Sbjct: 178 IVRDAISKAFETDVDVVERALMLTNDLGLVAVAACNGGNEEVQKLDIQLNRPVKMMLAQV 237
Query: 232 IGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQN 291
+A L EV +E KFDG R+QIHK G IH FSR + + + K +++N
Sbjct: 238 TSSIQSALNDLG--EVAVEWKFDGARVQIHKEGENIHIFSRRLENVTSSLPDVVKEVQEN 295
Query: 292 VLVDRCILDGEML---------VWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFD 342
V D IL+GE + + L RF + IAKA L FD
Sbjct: 296 VNADTAILEGEAVAIGKDGKPRAFQDILKRFRRKYDVEAIAKAI--------PLKLNLFD 347
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
VLY+ S+I L++R ELL + V+ S + ++ D ++ N
Sbjct: 348 VLYLNGESLIDNPLRKRRELLFQNVQSS----DRILVDR--------------QVITDNE 389
Query: 403 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYG 462
+E+++ + + + EGI++K + + PG R WLK KP LD+++IG +G
Sbjct: 390 EEIQEIYADALRAGHEGIMIKKPDAPYSPGKRGKNWLKKKPLM----ETLDLVVIGAEWG 445
Query: 463 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
GRR + + + + PDT +F + +V TG++DE+L + T
Sbjct: 446 YGRRANLIGSYALGCYD---PDT--GKFPAIGKVATGITDEKLAELTTLFSDLV------ 494
Query: 523 KRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVR 582
Y+ + +P++ E + I +S + + Y+LRFPR+ VR
Sbjct: 495 ------VYEAGRKIELKPEIVFEIAFEEI----------QKSPNYESGYALRFPRLVNVR 538
Query: 583 YDKPWHDCLDVQSFVELVHS 602
DK + ++ E+ HS
Sbjct: 539 DDKSPEEAESLERIGEIYHS 558
>gi|391869415|gb|EIT78613.1| ATP-dependent DNA ligase I [Aspergillus oryzae 3.042]
Length = 953
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 135/530 (25%), Positives = 227/530 (42%), Gaps = 97/530 (18%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH------PDAEDLFNVTCDL 199
K E K+I+ + L+LG++EK++ HE P E L L
Sbjct: 453 KGGPSEAKYIVRFLEGKLRLGLAEKTVLVALAQAVVTHEAALKGEKAPSPEKLAEGEAIL 512
Query: 200 KLVCEKL------------KDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEV 247
K V +L ++ H+ ++ G ++P LA + GKE
Sbjct: 513 KTVYSELPAYEIIIPAMLENGLSKLHEACKLQPGIPIKPMLAKPTKSITEVLDRFEGKEF 572
Query: 248 VIECKFDGDRIQIH------------------KNGSEIH-YFSRSFLDHSE-YGHAMSKI 287
E K+DG+R QIH K+G + FSR+ D S+ Y ++K+
Sbjct: 573 TCEYKYDGERAQIHYVAPDATHNYLEAQHTLQKDGKGLAAIFSRNSEDLSKKYPDVLAKL 632
Query: 288 ---IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFD 342
I+ V +LD E + WDT + F Q + + +D + D ++ C FAFD
Sbjct: 633 DSWIKDGV--KSFVLDCETVAWDTVNKKVLPF--QQLMTRKRKDVKAEDVKVKVCVFAFD 688
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
+L++ + +SL+ER ELL + + ++G + G N++V +
Sbjct: 689 LLFLNGEPTVKKSLRERRELLHESFQVTEGEFQ--FAQFG-NTNV--------------L 731
Query: 403 DEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIG 458
DE+++ ++++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G
Sbjct: 732 DEIQELLDDSVKASCEGLMVKMLDTDESGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVLG 791
Query: 459 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 518
YYG G+R FL+A A + + + S C +GTG S+ L+ + +L P
Sbjct: 792 AYYGRGKRTSVYGAFLLA-----AYNANTQTYESICNIGTGFSEANLEELHKELSPLVID 846
Query: 519 YEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEV-----FSA 569
P FY + K++PDVW E K+ L+++ + E
Sbjct: 847 R------PKPFYTHSTVPKDQPDVWFEPRLVWEVKTADLTLSPRYQAAADEFVGTTGGGK 900
Query: 570 PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
SLRFPR + R DK + E+ ++ G+ DD
Sbjct: 901 GVSLRFPRFIKAREDKKPEQATTTRQVAEMYRKQEAVAKENAGKKGVDDD 950
>gi|221060727|ref|XP_002261933.1| DNA ligase 1 [Plasmodium knowlesi strain H]
gi|193811083|emb|CAQ41811.1| DNA ligase 1, putative [Plasmodium knowlesi strain H]
Length = 924
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 191/413 (46%), Gaps = 55/413 (13%)
Query: 208 DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSE 266
D N K+ ++ G V+P LA + + E K+DG+R QIH +
Sbjct: 531 DMNTLSKKCTVKAGLPVQPMLAKPTKGIQEVLDRFNNVTFTCEYKYDGERAQIHYIDKDN 590
Query: 267 IHYFSRSFLDHSEYGHAMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAK 324
I FSR+ +E + +I+ ++ CI+D E++ +D + F +
Sbjct: 591 IKIFSRNLETMTEKYPDVIQIVRDQIISGATECIIDSEVVAYDIENKKILPFQVLTTRKR 650
Query: 325 AARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLN 384
D + ++C F FD++ VI + L+ R +LL ++K +G L
Sbjct: 651 KDVDIENIKVKICLFPFDLICCNGVPVIKEPLEIRRKLLYSLLKCKEGVL---------- 700
Query: 385 SHVRPQGEPCWSLVA--HNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLK 440
C++ + +NV++++ F ++ IEN EG+++K L + +EP RS WLK
Sbjct: 701 ---------CYATHSEMNNVEDMDIFLQDAIENNCEGLMVKTLLDNASYEPSRRSLNWLK 751
Query: 441 LKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 499
+K +YI SD +D++ I GYYG G+R G F++A ++ F + C+ GTG
Sbjct: 752 VKKDYIEGLSDSVDLVPIAGYYGKGKRSGVYGAFVLA-----TYNSETENFQTVCKAGTG 806
Query: 500 LSDEEL----DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSI 551
SDE L D + K+ P + S+Y+V++ K PDVW ++ K+
Sbjct: 807 FSDEILGSLYDTLSDKIIP----------SKKSYYEVSD--KLNPDVWFDAHYVWEVKAA 854
Query: 552 ILSITSDIRTIRSEVFS--APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
LS+ S + T V+S LRFPR R+R DK Q V+L +
Sbjct: 855 DLSL-SPVHTAAIGVYSDDKGIGLRFPRFLRLREDKNAEQATTSQQIVDLYEA 906
>gi|312375309|gb|EFR22707.1| hypothetical protein AND_14322 [Anopheles darlingi]
Length = 738
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 144/574 (25%), Positives = 241/574 (41%), Gaps = 99/574 (17%)
Query: 99 APNAGNFPMVAAEVLQRRQGMI-SGGLTIKELNDLLDRLAS---SENRAEKISVLSTLIK 154
A G+ +VA + ++ M LT+ + L +AS + + +K+ + +
Sbjct: 199 AQTTGDLGLVAEQSKSSQRMMFRPAPLTVASVFGKLREIASMIGAASMTKKMDKIQAMFV 258
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIFHEF---------------HPDAE---DLFNVT 196
E ++II + L++G++E+S+ P+A+ + +
Sbjct: 259 ACRHSESRFIIRSLAGKLRIGLAEQSLLQALAQACGDSPIIDALAKEPEAKVKARVDEIA 318
Query: 197 CDLKLVCEKLKDRNQ------------RHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHG 244
LK V + + NQ +R + G ++P LA ++ G
Sbjct: 319 LTLKTVYCQCPNYNQIVPVLLQYGVGEVLERCPMLPGTPLKPMLAHPTKGVQEVLQRFDG 378
Query: 245 KEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDH-SEYGHAMSKI-IEQNVLVDRCILD 300
E E K+DG+R QIH +GS +H FSR+ ++ S+Y + ++ + V+ ILD
Sbjct: 379 LEFTCEWKYDGERAQIHLLSDGS-VHIFSRNQENNTSKYPDVIGRLEFTRKDTVESAILD 437
Query: 301 GEMLVWDTSLNRFAEFGSNQEIAKAAR-DGLSSD--RQLCYFAFDVLYVGDTSVIHQSLK 357
E + WD + F Q ++ R D +D Q+C F FD+LY+ ++ +
Sbjct: 438 CEAVAWDVEKRQILPF---QVLSTRKRKDANEADIKVQVCVFMFDLLYLNGQPLVERPFS 494
Query: 358 ERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRD 417
ER ELL + +G Q + L ++DE+++F E +
Sbjct: 495 ERRELLYTHFREIEG-----------------QWKYATRLDTGDLDELQRFLDEAVRGNC 537
Query: 418 EGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFL 474
EG+++K L + +E RS WLKLK +Y+ G LD+++IGGY G G+R G FL
Sbjct: 538 EGLMVKTLKRDATYEIAKRSRNWLKLKKDYLTGVGDSLDLVVIGGYRGKGKRTGTYGGFL 597
Query: 475 VALAERPAPDTYPRRFISFCRVGTGLSDEELDA--------VVTKLKPYFRKYEYPKRAP 526
+A D + + C++GTG SDE+L V+ + KPY+R YE
Sbjct: 598 LACY-----DADNEEYQTICKIGTGFSDEDLQRHTEFLGAHVIPRAKPYYR-YE------ 645
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS-----APYSLRFPRIDRV 581
+ PD W E+ + +L + I SLRFPR RV
Sbjct: 646 ---------ANLEPDDWFEAVQVWEVLCADLSLSPIHQAAVGIVDPEKGISLRFPRFIRV 696
Query: 582 RYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGG 615
R DK D Q E+ + + + GG
Sbjct: 697 RDDKGATDATTAQQVSEMYLNQDQIKNQAAGQGG 730
>gi|119872622|ref|YP_930629.1| ATP-dependent DNA ligase [Pyrobaculum islandicum DSM 4184]
gi|166215377|sp|A1RTK4.1|DNLI_PYRIL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|119674030|gb|ABL88286.1| DNA ligase I, ATP-dependent Dnl1 [Pyrobaculum islandicum DSM 4184]
Length = 584
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 162/628 (25%), Positives = 264/628 (42%), Gaps = 80/628 (12%)
Query: 9 VIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFSALRLILPSLDRERGSYGLKES 68
V L ++ + Q+T S F+K D + YF L P E G+ E
Sbjct: 7 VKTLAAVESTTQRTTMVKLLTSLFKKARPEEIDKIIYFVLGDLRPP---WEGVELGVAEK 63
Query: 69 VLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGG----L 124
+ + A G+S +A+ ++K G A + A +R G+++ G L
Sbjct: 64 LCLRAVSKATGVSISELEAL----YKKTGDVGEAARKALSTA----KRPGLLAFGQQKPL 115
Query: 125 TIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSI 181
+ E+ D L ++A + KIS+L++L K + +E K+I ++ L+LG+++ ++
Sbjct: 116 EVSEVYDTLLKVAQASGEGAQDMKISLLASLFAKASPEEAKYIARFVVGKLRLGVADMTL 175
Query: 182 FHE----FHPDAEDL---FNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGD 234
F D E L +++ DL + + + + + I G V P LA R+
Sbjct: 176 IEALSDAFGVDKEALERAYHIYPDLGKLARHVAE-GRPLEEIKITPGVPVLPMLAQRLSS 234
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLV 294
+ KL G + E K+DG+R QIH + FSR D + + K + + V
Sbjct: 235 SSEILAKLGGS-AICEYKYDGERAQIHLKEGVVKIFSRRLEDITHAYPDVVKAVREAVSA 293
Query: 295 DRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFA----FDVLYVGDTS 350
IL+GE++ D F QE+ R + Y FD+LY+
Sbjct: 294 REAILEGEIVAIDPDTGDMLPF---QELMHRKRKHEVAVAVEMYPVVLNLFDLLYIDGED 350
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
+ ++ L R L +VV+ ++ W V + +E++ FF
Sbjct: 351 LTNEPLIYRRVRLSEVVQETE-----------------KVSIAKWR-VFDDAEEIDVFFH 392
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGE 469
E + EG+V K S +E G R W+K K +Y D +D++++G +YG G+R G
Sbjct: 393 EAVSLGMEGLVCKSPTSVYEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFYGRGKRAGL 452
Query: 470 VAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSF 529
FL+A A PA D F + C+VG+G +D +L + L+PY + +P+
Sbjct: 453 YGAFLLA-AYDPATDM----FYTVCKVGSGFTDADLKKMYEMLQPYKIPHRHPRVV---- 503
Query: 530 YQVTNNSKERPDVW------IESPEKSIILSI--TSDIRTIRSEVFSAPYSLRFPRID-R 580
SK PDVW IE I LS T + ++ V A +RFPR R
Sbjct: 504 ------SKMEPDVWFTPQVVIEVIGAEITLSPLHTCCLGAVKPGVGLA---IRFPRFTGR 554
Query: 581 VRYDKPWHDCLDVQSFVELVHSSNGTTQ 608
R DK V +EL Q
Sbjct: 555 YRTDKSPEQATTVSEMIELYKRQKKVAQ 582
>gi|119192832|ref|XP_001247022.1| hypothetical protein CIMG_00793 [Coccidioides immitis RS]
Length = 914
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 136/531 (25%), Positives = 221/531 (41%), Gaps = 99/531 (18%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEF------HPDAEDLFNVTCDL 199
K E K+I+ + L+LG+++K++ HE P AE L L
Sbjct: 414 KGGPSEAKYIVRFLEGKLRLGLADKTVLVALAHAMVAHETLSKGNKTPSAEQLAKGEAIL 473
Query: 200 KLVCEKLKDRN------------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEV 247
K V +L + ++ G ++P LA + GK+
Sbjct: 474 KQVYSELPSYEVIIPAMLEHGIFNLQENCKLQPGVPLKPMLAKPTKSISEVLDRFEGKDF 533
Query: 248 VIECKFDGDRIQIHKNGSE-IHYFSRSFLDHSEYGHAMSKIIEQNV---------LVDRC 297
E K+DG+R QIH + I ++ + + G + I +N ++D+
Sbjct: 534 TCEYKYDGERAQIHYVSQDAIKDYTATAGTLQKDGKGLCAIFSRNSEDLSKKYPDVLDKL 593
Query: 298 -----------ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD--RQLCYFAFDVL 344
+LD E + WD + F Q + + +D + D ++C FAFD+L
Sbjct: 594 ESWVQPGTKSFVLDCETVAWDLENKKVLPF--QQLMTRKRKDVKAEDIKVRVCIFAFDIL 651
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
++ + + +ER LL + P++G E +G S NV+E
Sbjct: 652 FLNGAPTVKMTFRERRALLHETFVPTEG--EFAFAQYGNTS---------------NVEE 694
Query: 405 VEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 460
++ E++++ EG+++K L S +EP RS WLK+K +Y+ G LD+++IG Y
Sbjct: 695 IQTLLDESVKSSCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGIGDSLDLVVIGAY 754
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
+G G+R FL+A A P+ + Y + C +GTG SD LD + L P
Sbjct: 755 FGKGKRTSVYGAFLLA-AYNPSTENYE----TICNIGTGFSDALLDELHKSLSPLAISQP 809
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP------ 570
P FY ++ K++PDVW E K+ L+I+ R EV
Sbjct: 810 KP------FYSHSSVPKDQPDVWFEPRLVWEVKAADLTISPRYRCASDEVMGMAGADGKG 863
Query: 571 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ--KGKEYGGLQDD 619
SLRFPR + R DK + E+ T+ KGK G+ DD
Sbjct: 864 VSLRFPRYIKARDDKKPDQASTTRMVAEMYRKQESVTKEDKGK---GVDDD 911
>gi|45185533|ref|NP_983249.1| ACL155Wp [Ashbya gossypii ATCC 10895]
gi|44981251|gb|AAS51073.1| ACL155Wp [Ashbya gossypii ATCC 10895]
gi|374106454|gb|AEY95363.1| FACL155Wp [Ashbya gossypii FDAG1]
Length = 697
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 146/578 (25%), Positives = 248/578 (42%), Gaps = 86/578 (14%)
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGG 123
GL E +L + DA G SA VR ++R+ G+ VA + + M
Sbjct: 155 GLGEGILIKTISDACG---KSAAQVR-SSYRE------CGDLGTVAQQARVVQPTMFKPK 204
Query: 124 -LTIKELNDLLDRLASSENR---AEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEK 179
LT++++ L +A +E + +KI ++ ++ E K++I + L++G++EK
Sbjct: 205 PLTVRDVFSTLQAIAQAEGKDSQGKKIRLIKKMLTACQGMEAKYLIRSLESKLRIGLAEK 264
Query: 180 SIF---------HEF---HPDAE----------DLFNVTCDLKLVCEKLKDRNQRHKRQD 217
++ HE P E D F + +++ + Q
Sbjct: 265 TVLVALSKAILTHEHDGKEPSPEQVDAAEALVRDTFCQVPNYEMIINAALQYGIMNLPQH 324
Query: 218 --IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRS 273
+ G ++P LA + G+ E K+DG+R Q+H ++G+ I +SR+
Sbjct: 325 CVLTPGIPLKPMLAKPTKSITEVLDRFQGQRFTCEYKYDGERAQVHLMEDGT-IRIYSRN 383
Query: 274 FLDHSE-YGHAMSKIIEQNVLVDRC-ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS 331
+ +E Y N R I+D E + WD + F Q ++ R G+
Sbjct: 384 SENMTERYPEIQFHQFLANPQTTRSLIIDCEAVAWDNEKQKILPF---QVLSTRKRKGVE 440
Query: 332 ---SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVR 388
++C FAFD+LY+ S++ SL +R + L V+K G L+
Sbjct: 441 LKDVKVRVCLFAFDLLYLNGESLLKCSLADRRKHLYSVLKVVPGELQF------------ 488
Query: 389 PQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEY 445
+ + E++ + ++++ EG+++K L S++EP RS WLKLK +Y
Sbjct: 489 -----ANEITTMELSELQTYLEQSVSASCEGLMVKMLDGEESQYEPSKRSRNWLKLKKDY 543
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+ ++G YYG G+R G FL+ PD F + C++GTG S+E
Sbjct: 544 LEGVGDSLDLAVLGAYYGRGKRTGTYGGFLLGCYN---PDL--EEFETCCKIGTGFSEEV 598
Query: 505 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI---TSDIRT 561
L ++ +LK + AP V+ + PDVW E +L+ S +
Sbjct: 599 LQSLHAQLK------DTVIAAPRG--DVSYDDSSPPDVWFEPAMLFEVLTADLSLSPVYK 650
Query: 562 IRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+V+ SLRFPR R+R DK D VE
Sbjct: 651 AGRDVYGKGISLRFPRFLRIREDKSVTDATSSDQIVEF 688
>gi|84453228|dbj|BAE71211.1| putative DNA ligase [Trifolium pratense]
Length = 682
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 205/426 (48%), Gaps = 55/426 (12%)
Query: 179 KSIFHEFHPDAEDLFNVTCDL-KLVCEKLKDRN-QRHKRQDIEVGKAVRPQLAMRIGDAH 236
KS F E + +++V D K+V L D + K+ D G V P L+
Sbjct: 261 KSPFEEAAQIVKKVYSVLPDYDKIVAALLTDGVWELPKKCDFTPGVPVGPMLSKATKGVS 320
Query: 237 AAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHS----EYGHAMSKIIEQ 290
K E E K+DG+R QIH +NGS + +SR+ ++ + A+S++ +
Sbjct: 321 EILNKFQDVEFTCEYKYDGERAQIHYLENGS-VEIYSRNAERNTGKFPDVVAAVSRL--K 377
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS-SD--RQLCYFAFDVLYVG 347
V ILD E++ +D + R F Q ++ AR ++ SD ++C FAFD+LY+
Sbjct: 378 KTTVSSFILDCELVAYDRAKQRILPF---QVLSTRARKNVAISDIKVEVCVFAFDLLYLN 434
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
+++ ++L+ R E L + G + S +++V+E++K
Sbjct: 435 GQALLQENLRIRREHLYASFEEESGFFQFAT-----------------STTSNDVEEIQK 477
Query: 408 FFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIR-AGSDLDVLIIGGYYGSG 464
F + I+ EG+++K L + +EP RS WLKLK +Y+ G LD++ IG ++G G
Sbjct: 478 FLDQAIDASCEGLIIKTLHEDATYEPSKRSLNWLKLKKDYMENIGDSLDLVPIGAFHGRG 537
Query: 465 RRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 524
+R G FL+A D F S ++GTG +E L+ T L R PK
Sbjct: 538 KRTGVYGAFLLACY-----DNDNEEFQSIAKIGTGFKEEVLEERSTSL----RSKVIPK- 587
Query: 525 APPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSAP-YSLRFPRID 579
P S+YQ ++ PDVW E+ E K+ L+I+ R +V S SLRFPR+
Sbjct: 588 -PKSYYQYGEST--NPDVWFEASEVWEVKAADLTISPVYRAAVGKVDSNKGISLRFPRLV 644
Query: 580 RVRYDK 585
RVR DK
Sbjct: 645 RVRPDK 650
>gi|317157291|ref|XP_001826374.2| DNA ligase Cdc9 [Aspergillus oryzae RIB40]
Length = 892
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 131/528 (24%), Positives = 222/528 (42%), Gaps = 93/528 (17%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH------PDAEDLFNVTCDL 199
K E K+I+ + L+LG++EK++ HE P E L L
Sbjct: 392 KGGPSEAKYIVRFLEGKLRLGLAEKTVLVALAQAVVTHEAALKGEKAPSPEKLAEGEAIL 451
Query: 200 KLVCEKL------------KDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEV 247
K V +L ++ H+ ++ G ++P LA + GKE
Sbjct: 452 KTVYSELPAYEIIIPAMLKNGLSKLHEACKLQPGIPIKPMLAKPTKSITEVLDRFEGKEF 511
Query: 248 VIECKFDGDRIQIHKNGSE-IHYFSRSFLDHSEYGHAMSKIIEQN----------VL--- 293
E K+DG+R QIH + H + + + G ++ I +N VL
Sbjct: 512 TCEYKYDGERAQIHYVAPDATHNYPEAQHTLQKDGKGLAAIFSRNSEDLSKKYPDVLAKL 571
Query: 294 -------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVL 344
V +LD E + WDT + F Q + + +D + D ++ C FAFD+L
Sbjct: 572 DSWIKDGVKSFVLDCETVAWDTVNKKVLPF--QQLMTRKRKDVKAEDVKVKVCVFAFDLL 629
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
++ + +SL+ER ELL + + ++G + G N++V +DE
Sbjct: 630 FLNGEPTVKKSLRERRELLHESFQVTEGEFQ--FAQFG-NTNV--------------LDE 672
Query: 405 VEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 460
+++ ++++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G Y
Sbjct: 673 IQELLDDSVKASCEGLMVKMLDTDESGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVLGAY 732
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
YG G+R FL+A A + + + S C +GTG S+ L+ + +L P
Sbjct: 733 YGRGKRTSVYGAFLLA-----AYNANTQTYESICNIGTGFSEANLEELHKELSPLVIDR- 786
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEV-----FSAPY 571
P FY + K++PDVW E K+ L+++ + E
Sbjct: 787 -----PKPFYTHSTVPKDQPDVWFEPRLVWEVKTADLTLSPRYQAAADEFVGTTGGGKGV 841
Query: 572 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
SLRFPR + R DK + E+ ++ G+ DD
Sbjct: 842 SLRFPRFIKARGDKKPEQATTTRQVAEMYRKQEAVAKENAGKKGVDDD 889
>gi|83775118|dbj|BAE65241.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 882
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 131/528 (24%), Positives = 222/528 (42%), Gaps = 93/528 (17%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH------PDAEDLFNVTCDL 199
K E K+I+ + L+LG++EK++ HE P E L L
Sbjct: 382 KGGPSEAKYIVRFLEGKLRLGLAEKTVLVALAQAVVTHEAALKGEKAPSPEKLAEGEAIL 441
Query: 200 KLVCEKL------------KDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEV 247
K V +L ++ H+ ++ G ++P LA + GKE
Sbjct: 442 KTVYSELPAYEIIIPAMLKNGLSKLHEACKLQPGIPIKPMLAKPTKSITEVLDRFEGKEF 501
Query: 248 VIECKFDGDRIQIHKNGSE-IHYFSRSFLDHSEYGHAMSKIIEQN----------VL--- 293
E K+DG+R QIH + H + + + G ++ I +N VL
Sbjct: 502 TCEYKYDGERAQIHYVAPDATHNYPEAQHTLQKDGKGLAAIFSRNSEDLSKKYPDVLAKL 561
Query: 294 -------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVL 344
V +LD E + WDT + F Q + + +D + D ++ C FAFD+L
Sbjct: 562 DSWIKDGVKSFVLDCETVAWDTVNKKVLPF--QQLMTRKRKDVKAEDVKVKVCVFAFDLL 619
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
++ + +SL+ER ELL + + ++G + G N++V +DE
Sbjct: 620 FLNGEPTVKKSLRERRELLHESFQVTEGEFQ--FAQFG-NTNV--------------LDE 662
Query: 405 VEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 460
+++ ++++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G Y
Sbjct: 663 IQELLDDSVKASCEGLMVKMLDTDESGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVLGAY 722
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
YG G+R FL+A A + + + S C +GTG S+ L+ + +L P
Sbjct: 723 YGRGKRTSVYGAFLLA-----AYNANTQTYESICNIGTGFSEANLEELHKELSPLVIDR- 776
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEV-----FSAPY 571
P FY + K++PDVW E K+ L+++ + E
Sbjct: 777 -----PKPFYTHSTVPKDQPDVWFEPRLVWEVKTADLTLSPRYQAAADEFVGTTGGGKGV 831
Query: 572 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
SLRFPR + R DK + E+ ++ G+ DD
Sbjct: 832 SLRFPRFIKARGDKKPEQATTTRQVAEMYRKQEAVAKENAGKKGVDDD 879
>gi|409051591|gb|EKM61067.1| hypothetical protein PHACADRAFT_204217 [Phanerochaete carnosa
HHB-10118-sp]
Length = 843
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 136/510 (26%), Positives = 220/510 (43%), Gaps = 88/510 (17%)
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
SS+N+ K+S+++ L+ +E K+II + L++G +E+++ A
Sbjct: 349 SSQNK--KVSIITKLLAACQGEEAKYIIRSLEGKLRIGNAERTVLVALAHAAILAEQEKA 406
Query: 198 DLKLVCEKLKDRNQR------------------------------HKRQDIEVGKAVRPQ 227
+L EKL R + +R + G ++P
Sbjct: 407 TKRLNQEKLTGRLEHAAEVVKSVYSELPSYDLVIPALLEVGIDGLKERCKLTPGVPLKPM 466
Query: 228 LAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHSE-YGHAMS 285
LA + GK+ E K+DG+R Q+HK + + FSR+ D S+ Y M
Sbjct: 467 LAKPTKAIGEVLDRFEGKKFTCEYKYDGERAQVHKLDDGTVAVFSRNSEDMSKKYPDLMD 526
Query: 286 KIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAF 341
++ +LD E + D + F QE++K R + + +C F F
Sbjct: 527 QLPRCMKSTAKSFVLDAEAVAVDRKTGQLKPF---QELSKRKRKDVKVEDIEIWVCLFGF 583
Query: 342 DVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHN 401
D+LY+ S++H ER ELL + +G + + C
Sbjct: 584 DLLYLNGESLLHHPFAERRELLGTHFQEVEGEF------------TFAKSKDC-----ET 626
Query: 402 VDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 457
+E++ F +E++++ EG+++K L S +EP RS WLKLK +Y+ G LD++++
Sbjct: 627 TEEIQAFLEESVKDGCEGLMVKMLETEASHYEPSRRSVNWLKLKKDYLAGVGDSLDLVVV 686
Query: 458 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 517
GGYYG G+R FL+A D ++ + C++GTG SDE L LKP
Sbjct: 687 GGYYGKGKRTNVYGAFLLACY-----DADGEQYQTICKIGTGFSDEALQQHHELLKP--- 738
Query: 518 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP------- 570
E K P +V +PDVW E K + +T+D+ S V++A
Sbjct: 739 -LELTK--PRGDIKVGGA---KPDVWFEP--KVVWEVLTADLSL--SPVYTAAQGLADER 788
Query: 571 -YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
SLRFPR RVR DK D + E+
Sbjct: 789 GISLRFPRFIRVRDDKGADDATGPEQIAEM 818
>gi|30962491|dbj|BAC76762.1| DNA ligase I [Coprinopsis cinerea]
Length = 825
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 136/529 (25%), Positives = 228/529 (43%), Gaps = 91/529 (17%)
Query: 141 NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLK 200
++A+K+ +++ L+ E K+I+ + L++G +E+S+ A D K
Sbjct: 335 SQAKKVGIITKLLAACQDVEAKYIVRSLEGKLRIGNAERSVLVSLAHAAVLAERERADKK 394
Query: 201 LVCEKLKDRNQR------------------------------HKRQDIEVGKAVRPQLAM 230
+KL R + +R + G ++P LA
Sbjct: 395 WSQDKLTARLEEGAEIMKAVYSELPSYDSVVPALLEGGIKGLRERCKLTPGIPLKPMLAK 454
Query: 231 RIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHS----EYGHAMS 285
+ K E K+DG+R QIH+ + + FSR+ D S + +S
Sbjct: 455 PTKAIREVLDRFENKRFTCEYKYDGERAQIHRLDDGTVGVFSRNSEDMSKKYPDLVDQLS 514
Query: 286 KIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFD 342
K I++N +LD E + D + + F QE+++ R + + ++C FAFD
Sbjct: 515 KCIKKNT--KSFVLDSEAVAIDRTTGKLMPF---QELSRRKRKDVKVEDIQVRVCIFAFD 569
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
+LY+ +I++ L ER +LL+K + G + G +
Sbjct: 570 LLYLNGEPLINKPLVERRDLLRKHFQVVPGEFDFAKSSDG-----------------EST 612
Query: 403 DEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIG 458
DE++ F +E++++ EG+++K L S +EP RS WLKLK +Y+ G LD++++G
Sbjct: 613 DEIQTFLEESVKDGCEGLMVKMLESDASNYEPSRRSVNWLKLKKDYLAGVGDSLDLVVVG 672
Query: 459 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 518
YYG G+R FL+A D + + C++GTG SDE L LKP
Sbjct: 673 AYYGKGKRTNYYGAFLLACY-----DADSEEYQTICKIGTGFSDEALQTHYETLKPL--- 724
Query: 519 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-------- 570
++ P Y +K PD+W E K + +T+D+ S +++A
Sbjct: 725 ----EQTKPRGYIKIGGAK--PDIWFEP--KVVWEVLTADLSL--SPIYTAAQGLVEERG 774
Query: 571 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
SLRFPR RVR DK D + E+ + Q G + G DD
Sbjct: 775 ISLRFPRFIRVRDDKDADDATAPEQIAEM-YERQSLAQAGSKKKGGDDD 822
>gi|112490160|pdb|2CFM|A Chain A, Atp-Dependent Dna Ligase From Pyrococcus Furiosus
Length = 561
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 126/496 (25%), Positives = 222/496 (44%), Gaps = 78/496 (15%)
Query: 124 LTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE-- 178
LTIK + L ++A + +K+ L+ L E K++ IL + G++E
Sbjct: 111 LTIKRVYQTLVKVAETTGEGSQDKKVKYLADLFXDAEPLEAKYLARTILGTXRTGVAEGL 170
Query: 179 --KSIFHEFHPDAEDL---FNVTCDLKLVCEKLK-DRNQRHKRQDIEVGKAVRPQLAMRI 232
+I FH E + + +T D V + K + N+ + +++GK ++P LA +
Sbjct: 171 LRDAIAXAFHVKVELVERAYXLTSDFGYVAKIAKLEGNEGLAKVQVQLGKPIKPXLAQQA 230
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNV 292
A + G E E K+DG R+Q+HK+GS+I +SR + + + + +++ +
Sbjct: 231 ASIRDALLE-XGGEAEFEIKYDGARVQVHKDGSKIIVYSRRLENVTRAIPEIVEALKEAI 289
Query: 293 LVDRCILDGEM---------LVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDV 343
+ ++ I++GE+ L + L RF + +E + L FDV
Sbjct: 290 IPEKAIVEGELVAIGENGRPLPFQYVLRRFRRKHNIEEXXEKI--------PLELNLFDV 341
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
LYV S+I +R L++++K N ++ +L+ V+
Sbjct: 342 LYVDGQSLIDTKFIDRRRTLEEIIKQ--------------NEKIKV----AENLITKKVE 383
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGS 463
E E F+K +E EG+ K L + +EPG+R KWLK+KP +LD++IIG +G
Sbjct: 384 EAEAFYKRALEXGHEGLXAKRLDAVYEPGNRGKKWLKIKP----TXENLDLVIIGAEWGE 439
Query: 464 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
GRR F++ A D F+ +VG+G +D++L LKP K E +
Sbjct: 440 GRRAHLFGSFILG-----AYDPETGEFLEVGKVGSGFTDDDLVEFTKXLKPLIIKEEGKR 494
Query: 524 RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 583
VW++ K +I +I+ +S + + ++LRFPR +R
Sbjct: 495 ------------------VWLQP--KVVIEVTYQEIQ--KSPKYRSGFALRFPRFVALRD 532
Query: 584 DKPWHDCLDVQSFVEL 599
DK D ++ +L
Sbjct: 533 DKGPEDADTIERIAQL 548
>gi|302697907|ref|XP_003038632.1| hypothetical protein SCHCODRAFT_46359 [Schizophyllum commune H4-8]
gi|300112329|gb|EFJ03730.1| hypothetical protein SCHCODRAFT_46359, partial [Schizophyllum
commune H4-8]
Length = 833
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 137/533 (25%), Positives = 231/533 (43%), Gaps = 99/533 (18%)
Query: 141 NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLK 200
++ +K+S+++ L+ E K+I+ + L++G +E+S+ A N D K
Sbjct: 344 SQTKKVSIITKLLAACQDFEAKYIVRSLEGKLRIGNAERSVLVALAHAAVLAENAKRDRK 403
Query: 201 LVCEKLKDRNQR------------------------------HKRQDIEVGKAVRPQLAM 230
L EKL R + + + G ++P LA
Sbjct: 404 LHGEKLAARLEESTNIVKAVYSELPSYDKVIPALLDHGIDGLREHCKLSPGVPLKPMLAK 463
Query: 231 RIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-KNGSEIHYFSRSFLDHSEYGHAMSKIIE 289
+ K E K+DG+R Q+H +I FSR+ D S+ ++E
Sbjct: 464 PTKAIGEVLDRFENKRFTCEYKYDGERAQVHLMEDGKIAVFSRNSEDMSK---KYPDLME 520
Query: 290 QNVLVDRCI--------LDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCY 338
Q + RCI LD E + D + + F QE++K R + + ++C
Sbjct: 521 Q---IPRCIKDSTKSFVLDAEAVAIDRTTGKLMPF---QELSKRKRKDVKVEDIQVKVCL 574
Query: 339 FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLV 398
FAFD+LY+ ++ +SL ER LL++ + V + + S
Sbjct: 575 FAFDLLYLNGEPLLQKSLAERRVLLRESFQ-----------------IVESEFQFAKSTD 617
Query: 399 AHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDV 454
+ V+E++ F +E++++ EG+++K L S +EP RS WLKLK +Y+ G LD+
Sbjct: 618 SETVEEIQTFLEESVKDGCEGLMVKMLESDASYYEPSRRSINWLKLKKDYLAGVGDSLDL 677
Query: 455 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 514
+++GGYYG G+R FL+A D + + C++GTG S+E L + LKP
Sbjct: 678 VVVGGYYGKGKRTNVYGAFLLACY-----DADSEEYQTICKIGTGFSEEALQSHYNVLKP 732
Query: 515 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY--- 571
+ E P+ +PD+W E K + +T+D+ S V++A
Sbjct: 733 L--EMEKPRGD-------IKVGGAKPDIWFEP--KVVWEVLTADLSL--SPVYTAAMGLV 779
Query: 572 -----SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
SLRFPR R+R DK + + E+ + Q G + G + DD
Sbjct: 780 DERGISLRFPRFIRIRDDKNADNATGCEQVAEM-YERQALAQGGGKKGKVVDD 831
>gi|307212762|gb|EFN88433.1| DNA ligase 1 [Harpegnathos saltator]
Length = 826
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 188/420 (44%), Gaps = 62/420 (14%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDH-SE 279
G ++P LA + G + E K+DG+R QIH N +I+ +SR+ ++ S+
Sbjct: 446 GIPLKPMLAHPTKGVQEVLTRFEGLKFTCEWKYDGERAQIHANNGQINIYSRNQENNTSK 505
Query: 280 YGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---Q 335
Y +++ ++ LV+ CILD E + WD + F Q ++ R + + Q
Sbjct: 506 YPDIINRFKNTRDELVENCILDCEAVAWDKEKKQILPF---QILSTRKRKDANEEDIKVQ 562
Query: 336 LCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW 395
+C F FD+LY+ S++ + +R ELL+K K +G +
Sbjct: 563 VCVFMFDLLYLNGKSLVKEPFAKRRELLKKHFKEVEGEWKY-----------------AN 605
Query: 396 SLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDL 452
SL ++E++ F E+++ EG+++K L + +E RS WLKLK +Y+ G L
Sbjct: 606 SLDTSMIEEMQIFLDESVKGNCEGLMVKTLEEEATYEIAKRSRNWLKLKKDYLDGVGDTL 665
Query: 453 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL------- 505
DV++IGGY G G+R G FL+A D + S C++GTG +E+L
Sbjct: 666 DVVVIGGYIGKGKRTGTYGGFLLACY-----DQENEEYQSVCKIGTGFKEEDLENHTKFF 720
Query: 506 -DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIR 560
D V+++ K Y+R + PD W E + K LS++ R
Sbjct: 721 KDHVISQAKSYYR----------------FDGSHEPDHWFEPIQVWEIKCADLSLSPVHR 764
Query: 561 TIRSEVFSAP-YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
V SLRFPR R+R DK + Q ++ ++ K ++D
Sbjct: 765 AAIGIVDPEKGISLRFPRFIRIREDKNCEEATLAQQVADMYNNQEQIKNKTSASKATEED 824
>gi|240282287|gb|EER45790.1| DNA ligase [Ajellomyces capsulatus H143]
Length = 899
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 151/608 (24%), Positives = 255/608 (41%), Gaps = 125/608 (20%)
Query: 103 GNFPMVAAEVLQRRQGMISGG-LTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNA 158
G+ +VAA+ + M LT++ +++ L +A ++ ++ +KIS + L+ +A
Sbjct: 323 GDLGLVAAKSRSNQPTMFKPKPLTVRSVHEGLLAIAKTQGHGSQEKKISAIKKLLSSADA 382
Query: 159 -------------------QEMKWIIMIILKDLKLGISEKSIF---------HEFH---- 186
E K+II + L+LG++EK++ HE
Sbjct: 383 TLAGKGSKGIDITQNKGGPSEAKFIIRFLEGKLRLGLAEKTVLVALAHAMVAHEVELQGK 442
Query: 187 --PDAEDLFNVTCDLKLVCEKLKDR-------------NQRHKRQDIEVGKAVRPQLAMR 231
P E+L LK V +L N + K + ++ G ++P LA
Sbjct: 443 KAPSTEELGKGEAILKSVYSELPSYEVIIPAMLEHGIFNLKEKCK-LQPGVPLKPMLAKP 501
Query: 232 IGDAHAAWRKLHGKEVVIECKFDGDRIQIH------------------KNGSEI-HYFSR 272
+ GK E K+DG+R QIH K+G I FSR
Sbjct: 502 TKSITEVLDRFEGKNFTCEYKYDGERAQIHYVAREEMHKYPSTASTLQKDGEGICAIFSR 561
Query: 273 SFLDHSE-YGHAMSKI---IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARD 328
+ D S+ Y + K+ ++Q +LD E + WDT + F Q + + +D
Sbjct: 562 NSEDLSKKYPDILGKLENWVKQGTT--SFVLDCETVAWDTVNKKVLPF--QQLMTRKRKD 617
Query: 329 GLSSDRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSH 386
+ D ++ C FAFD+L++ + +L+ER L P +G E + HG
Sbjct: 618 VKAEDVKVKVCVFAFDLLFLNGEPTVKMTLRERRARLHDAFTPIEG--EFVFAQHG---- 671
Query: 387 VRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKP 443
+++DE++ E+++ EG+++K L S +EP RS WLK+K
Sbjct: 672 -----------DTNDLDEIQTLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKK 720
Query: 444 EYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSD 502
+Y+ G LD++++G YYG G+R FL+A A +T + F + C +GTG S+
Sbjct: 721 DYLAGIGDSLDLVVLGAYYGRGKRTSVYGAFLLA-----AYNTSTQTFQTVCNIGTGFSE 775
Query: 503 EELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITS 557
L+ + L P P FY ++ K++PDVW E P+ K+ L+++
Sbjct: 776 ALLEELHKSLSPLVIDR------PKPFYDHSSVPKDQPDVWFE-PKYVWEVKAADLTLSP 828
Query: 558 DIRTIRSEVFSAP------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 611
+ E SLRFPR + R DK + + E+ +
Sbjct: 829 RYKAAADEFMGTSNGAGKGISLRFPRYIKSRDDKKPEEATATRQVAEMYRRQESVNKDTT 888
Query: 612 EYGGLQDD 619
GG+ DD
Sbjct: 889 GKGGVDDD 896
>gi|389742332|gb|EIM83519.1| ATP-dependent DNA ligase [Stereum hirsutum FP-91666 SS1]
Length = 934
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 230/511 (45%), Gaps = 90/511 (17%)
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF--------------- 182
SS+N+ KI++++ L+ QE K+I+ + L++G +E+++
Sbjct: 441 SSQNK--KINIITKLLAACLGQEAKYIVRSLEGKLRIGNAERTVLVALAHAAVLAEQEKS 498
Query: 183 -HEFHPD---------AEDLFNVTCDL----KLVCEKLKDRNQRHKRQ-DIEVGKAVRPQ 227
++ PD A + +V +L K++ L D R + G ++P
Sbjct: 499 GKKWSPDKLATRLEQGASIIKSVYSELPNYDKVIPALLTDGLDRLTETCKLTPGVPLKPM 558
Query: 228 LAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHSEYGHAMS 285
LA + GK E K+DG+R Q+H +GS I+ FSR+ D S+ +
Sbjct: 559 LAKPTKAIGEVLDRFEGKRFTCEYKYDGERAQVHMLDDGS-INVFSRNSEDMSKKYPDLV 617
Query: 286 KIIEQNV--LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFA 340
+ + V +LD E + D + F QE++K R + + ++C FA
Sbjct: 618 EQLPHCVKEATKSFVLDTEAVAIDRQTGKLMPF---QELSKRKRKDVKVEDIQVRVCLFA 674
Query: 341 FDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAH 400
FD+LY+ ++H+ L ER ELL+K + +G + S+
Sbjct: 675 FDLLYLNGEPLLHKPLAERRELLRKHFQSVEGEFDF-----------------AKSMDNE 717
Query: 401 NVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 456
+V+E++ F ++++ EG+++K + S +EP RS WLKLK +Y+ G LD+++
Sbjct: 718 SVEEIQTFLDVSVKDGCEGLMVKMMESEASHYEPSRRSVNWLKLKKDYLAGVGDSLDLVV 777
Query: 457 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 516
+GGYYG G+R FL+A D+ F + C++GTG S+E L + LKP
Sbjct: 778 VGGYYGKGKRTNFYGAFLLACY-----DSDSEEFQTICKIGTGFSEEALASHYEALKPLE 832
Query: 517 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY----- 571
+ P +PD+W E K + +T+D+ S V++A
Sbjct: 833 MEKHRGDIKP---------GGAKPDIWFEP--KIVWEVLTADLSL--SPVYTAAQGLVEE 879
Query: 572 ---SLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
SLRFPR RVR DK D + E+
Sbjct: 880 RGISLRFPRFIRVRDDKGADDATGPEQVAEM 910
>gi|154342041|ref|XP_001566972.1| putative DNA ligase I [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134064297|emb|CAM40497.1| putative DNA ligase I [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 776
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 188/411 (45%), Gaps = 51/411 (12%)
Query: 214 KRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH---KNGSEIHYF 270
K I G V+PQLA +L GK+ E K+DG+R QIH NG H F
Sbjct: 384 KELSIRPGLPVKPQLAHPTSGITVILDRLQGKKFTSEYKYDGERAQIHYSEDNG--FHIF 441
Query: 271 SRSFLDHSEYGHAMSKIIEQN---VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR 327
SR+ H+ + I+ V I+D E++ F Q +
Sbjct: 442 SRNSETHTGKYPDVIAILPNTFDAAEVQSFIIDAEVVAVHPETGALQAFQVLQHRGRKNI 501
Query: 328 DGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHV 387
+C F FD+LY+ ++++L++R ELL + ++P +L
Sbjct: 502 AEKDVSISVCLFVFDLLYLNGEPQLNKTLQQRRELLWRYIRPLPAKL------------- 548
Query: 388 RPQGEPCWS--LVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKP 443
C++ L + +V++V+KF +++I + EG+++K L + + P RS WLKLK
Sbjct: 549 ------CFAAYLDSDDVEDVQKFLEKSIADGCEGLMVKTLEEEATYTPAKRSHYWLKLKK 602
Query: 444 EYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSD 502
+Y+ +D LD++ I +YG G+R G FL+A + P D Y S C++GTG D
Sbjct: 603 DYMDGVTDTLDLVPIAAFYGKGKRTGVFGGFLLACYD-PKADEYQ----SICKIGTGFQD 657
Query: 503 EELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSD 558
EEL+ + LKP+ + P +Y+ E PDVW+ + K+ LS++
Sbjct: 658 EELEKLTQSLKPFVVHDK------PRYYRAGG---EEPDVWLTEAQVWEVKAADLSVSPV 708
Query: 559 IRTIRSEV-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 608
+ V + +LRFPR R R DK D + Q E+ + + Q
Sbjct: 709 HQAAVGLVDPNKGIALRFPRYVRQREDKNPVDATNTQQVAEMYKAQSLAVQ 759
>gi|21228816|ref|NP_634738.1| ATP-dependent DNA ligase [Methanosarcina mazei Go1]
gi|23813979|sp|Q8PTK1.1|DNLI2_METMA RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 2
gi|20907336|gb|AAM32410.1| ATP-dependent DNA ligase [Methanosarcina mazei Go1]
Length = 568
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 217/466 (46%), Gaps = 69/466 (14%)
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE----KSIFHEFHPDAEDL---FNVTC 197
K+ L L ++ +E K+I + L++L++G+ E +I F AE + F VT
Sbjct: 143 KVKNLQFLFTSSSPREAKYISRLALEELRIGVGEGVVRDAIAKAFSVPAEIVEHSFMVTN 202
Query: 198 DLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGD 256
DL +V K + +R IE+ + ++ L+ D A R + KEV IE KFDG
Sbjct: 203 DLGIVAAAAKKGGVEALERLGIEINRPIKMMLSQISPDIDADIRAM--KEVAIEWKFDGA 260
Query: 257 RIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWD-TSLNRFAE 315
R+QIHK+G+ + FSR + + + +I+ ++V + ILDGE + D + R
Sbjct: 261 RVQIHKDGNSVTLFSRKLENVTSSLPDLVEIVRKHVKAESAILDGEAVAVDENGVPR--- 317
Query: 316 FGSNQEIAKAAR-------DGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVK 368
+ QEI K R L QL + FD++Y+ ++I L ER + L+ V+
Sbjct: 318 --AFQEILKRFRRKYDVREKALGIPIQLNF--FDIMYINGKTLIDLPLLERRKALESCVE 373
Query: 369 PSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK 428
S V D S ++ +++ VEK ++E ++ EG+++K+ S
Sbjct: 374 SS-------VEDSKSISVAE-------QVITGDLELVEKIYREALKAGHEGVMVKNPNSV 419
Query: 429 WEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPR 488
+ PG R WLK KP LD++I+G +G GRR + + VA + PDT
Sbjct: 420 YSPGKRGKNWLKKKPLM----DTLDLVIVGAEWGFGRRANLIGSYTVACYD---PDTT-- 470
Query: 489 RFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE 548
RF+ +VGTGL+D++L + L E + + RP V +E
Sbjct: 471 RFLQVGKVGTGLTDDQLKELTEILSGLMEGGE-----AGGVFAI------RPKVVLEIAF 519
Query: 549 KSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQ 594
+ I +S + + ++LRFPR R+R DK + +Q
Sbjct: 520 EEI----------QKSPNYDSGFALRFPRFIRIRDDKDPEEADTIQ 555
>gi|328848917|gb|EGF98110.1| hypothetical protein MELLADRAFT_41015 [Melampsora larici-populina
98AG31]
Length = 635
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 160/663 (24%), Positives = 288/663 (43%), Gaps = 117/663 (17%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV------DYFSALRLILPSL--DRERGSY 63
LV F I T KR + K+L Y V + + L + L D E
Sbjct: 10 LVHTFTLIDGTT----KRLEITKYLSQYLMKVINRTPNELIKIIYLCINRLCPDYEGIEL 65
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGG 123
G+ ES+L + ++G + A +++K G+ +VA ++ M
Sbjct: 66 GIGESILIKAIGSSMGRTPTQVKA----DFKK------VGDLGLVAQNSRSTQKTMFKPK 115
Query: 124 L-TIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEK 179
L T+ + L +A++ ++A+K+ +++ ++ +E K+II + L++G++E+
Sbjct: 116 LLTVNSVYQDLKTIATTSGHSSQAKKVGIITKMLAACEGEEAKYIIRSLEGKLRIGLAER 175
Query: 180 SIFHEF----------HPD------------------AEDLFNVTCDLKLVCEKLKDRNQ 211
++ +P + +++ LV L
Sbjct: 176 TVLVALATAVVTTGTSNPTKRKSKETLSTEILEGTNLVKSVYSEIPSYDLVIPALLKGGI 235
Query: 212 RHKRQDIEV--GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEI 267
+ R++ ++ G ++P LA + G+ E K+DG+R QIH ++G+ I
Sbjct: 236 QGLRENCKLTPGVPLKPMLAKPTKSISEVLDRFEGQSFTCEYKYDGERAQIHYLEDGT-I 294
Query: 268 HYFSRSFLDHSEYGHAMSKIIEQNVLVD---RCILDGEMLVWDTSLNRFAEFGSNQEIAK 324
FSR+ + SE M +++++ D +LD E++ WD + F QE++K
Sbjct: 295 SIFSRNSENMSEKYPDMLDQMKKSIKTDITKSFVLDSEVVAWDPICKKILPF---QELSK 351
Query: 325 AARDGLSS---DRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
R + D ++ F FD+LY+ D ++I Q LK R L++
Sbjct: 352 RKRKDVKRSEIDIKIKIFGFDLLYLNDEALIKQDLKYRRMKLKEHF-------------- 397
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK---WEPGDRSGKW 438
+ + + SL + V+E++ F E+I+ EG+++K L + +EP RS W
Sbjct: 398 ---NEIEDEFNLAKSLDSDKVEEIQVFLDESIKASCEGLMVKMLNGENAYYEPSRRSMNW 454
Query: 439 LKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVG 497
LK+K +Y+ G LD+++IG Y+G G+R FL+ + D + S C++G
Sbjct: 455 LKVKKDYLAGLGDSLDLVVIGAYFGKGKRTNVYGAFLLGIY-----DQSTESYQSICKIG 509
Query: 498 TGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS 557
TG +DE L++ KLKP E ++ S+Y + +PDVWIE+ + + + +
Sbjct: 510 TGFTDEVLESHYQKLKP----LELLQKK--SYY---DTGDVKPDVWIEN--RIVWEVLAA 558
Query: 558 DIRTIRSEVFSAP----------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTT 607
D+ S ++SA SLRFPR R R DK D E+ T
Sbjct: 559 DLSL--SPIYSAARGLCGDGTRGISLRFPRYIRERDDKGPEDGTGPDQVAEMYERQVCTQ 616
Query: 608 QKG 610
+G
Sbjct: 617 TQG 619
>gi|157872853|ref|XP_001684953.1| putative DNA ligase I [Leishmania major strain Friedlin]
gi|68128023|emb|CAJ06835.1| putative DNA ligase I [Leishmania major strain Friedlin]
Length = 681
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 193/422 (45%), Gaps = 57/422 (13%)
Query: 210 NQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSE-IH 268
Q K I G V+PQLA +L GK+ E K+DG+R QIH + + H
Sbjct: 294 KQYAKDLSIRPGLPVKPQLAYPTSSITVILDRLQGKKFTSEYKYDGERAQIHYDKDKGFH 353
Query: 269 YFSRSFLDHS-EYGHAMSKI--IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA 325
FSR+ H+ +Y +S + + V V ILD E++ + F Q +
Sbjct: 354 IFSRNSETHTGKYPDVISMLPKVFDPVEVQSFILDSEVVAVHSETGALQAF---QVLQHR 410
Query: 326 ARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
R ++ + +C F FD+LY ++++L++R ELL + + P +L
Sbjct: 411 GRKNIAEEDVSIPVCVFVFDILYFNGEPQLNKTLQQRRELLWRCIHPLPAKL-------S 463
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLK 440
+H L + V++V+ F + +I + EG+++K L + + P RS WLK
Sbjct: 464 FATH----------LDSEKVEDVQTFLERSIADGCEGLMVKTLEEEANYTPAKRSHYWLK 513
Query: 441 LKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 499
LK +Y+ +D LD++ I +YG G+R G FL+A + P D Y S C++GTG
Sbjct: 514 LKKDYMDGVTDTLDLVPIAAFYGKGKRTGVFGGFLLACYD-PKADEYQ----SICKIGTG 568
Query: 500 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSI 555
DEEL+ + LKP+ + P +Y+ E PDVW+ + K+ LS+
Sbjct: 569 FQDEELEKLTQSLKPFVVDEK------PRYYRAGG---EEPDVWLTEAQVWEVKAADLSV 619
Query: 556 TSDIRTIRSEV-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELV--------HSSNGT 606
+ + V +LRFPR R R DK D + + ++ H +NG
Sbjct: 620 SPVHQAAVGLVDPDKGIALRFPRYLRQREDKKPADATNARQVADMYKAQSLAAEHDANGD 679
Query: 607 TQ 608
+
Sbjct: 680 AE 681
>gi|1794221|gb|AAC53003.1| DNA ligase III-beta [Mus musculus]
Length = 956
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 223/497 (44%), Gaps = 53/497 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E++ L L+ E+ L + + A ++K I +I DLK+ K +
Sbjct: 377 LTIQEVDAFLLHLSKLTKEDEQQQALQDIASRCTANDLK-CIRLIKHDLKMNSGAKHVLD 435
Query: 184 EFHPDAEDLFNVTCDLKLVCEKL--------KDRNQRHK-RQDIEVGKAVRPQLAMRIGD 234
P+A + F + +L+ V E++ KD +R R + V+P LA
Sbjct: 436 ALDPNAYEAFKASRNLQDVVERVLHNEQEVEKDPGRRRALRVQASLMTPVQPMLAEACKS 495
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HK G YFSRS L H + H I +
Sbjct: 496 IEYAMKKCPNG-MFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPH-KVAHFKDYIPKAF 553
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + + FG+ KAA D LC F FD +Y D S+
Sbjct: 554 PGGQSMILDSEVLLIDNNTGKPLPFGTLGVHKKAA----FQDANLCLFVFDCIYFNDVSL 609
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + + R+ + S ++ + + D + + +E
Sbjct: 610 MDRPLCERRKFLHDNMVEIRNRI--------MFSEMKQ-----VTKASDLADMINRVIRE 656
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDV--LIIGGYY--GSGRRG 467
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D L++ G + G G +G
Sbjct: 657 GL----EGLVLKDVKGTYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGVFLIGQGSKG 710
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G ++ FL+ + PD+ +++ + + G D L + +L K P
Sbjct: 711 GMMSIFLMGCYD---PDS--QKWCTVTKCAGGHDDATLARLQKEL--VMVKISKDPSKIP 763
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKP 586
S+ ++ N PD + P+K+ + IT RSE +A S+RFPR R+R DK
Sbjct: 764 SWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRFPRCTRIRDDKD 820
Query: 587 WHDCLDVQSFVELVHSS 603
W ++ EL S
Sbjct: 821 WKSATNLPQLKELYQLS 837
>gi|1794223|gb|AAC53004.1| DNA ligase III-alpha [Mus musculus]
Length = 1015
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 221/497 (44%), Gaps = 53/497 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E++ L L+ E+ L + + A ++K I +I DLK+ K +
Sbjct: 377 LTIQEVDAFLLHLSKLTKEDEQQQALQDIASRCTANDLK-CIRLIKHDLKMNSGAKHVLD 435
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQ---------RHKRQDIEVGKAVRPQLAMRIGD 234
P+A + F + +L+ V E++ Q R R + V+P LA
Sbjct: 436 ALDPNAYEAFKASRNLQDVVERVLHNEQEVEKDPGRRRALRVQASLMTPVQPMLAEACKS 495
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQN 291
A +K + E K+DG+R+Q+HK G YFSRS L H + H I +
Sbjct: 496 IEYAMKKCPNG-MFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPH-KVAHFKDYIPKAF 553
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSV 351
ILD E+L+ D + + FG+ KAA D LC F FD +Y D S+
Sbjct: 554 PGGQSMILDSEVLLIDNNTGKPLPFGTLGVHKKAA----FQDANLCLFVFDCIYFNDVSL 609
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
+ + L ER + L + + R+ + S ++ + + D + + +E
Sbjct: 610 MDRPLCERRKFLHDNMVEIRNRI--------MFSEMKQVTK-----ASDLADMINRVIRE 656
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDV--LIIGGYY--GSGRRG 467
+ EG+VLKD+ +EPG R WLK+K +Y+ G+ D L++ G + G G +G
Sbjct: 657 GL----EGLVLKDVKGTYEPGKR--HWLKVKKDYLNEGAMADTADLVVLGVFLIGQGSKG 710
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G ++ FL+ + PD+ +++ + + G D L + +L K P
Sbjct: 711 GMMSIFLMGCYD---PDS--QKWCTVTKCAGGHDDATLARLQKEL--VMVKISKDPSKIP 763
Query: 528 SFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKP 586
S+ ++ N PD + P+K+ + IT RSE +A S+RFPR R+R DK
Sbjct: 764 SWLKI--NKIYYPDFIVPDPKKAAVWEITG-AEFSRSEAHTADGISIRFPRCTRIRDDKD 820
Query: 587 WHDCLDVQSFVELVHSS 603
W ++ EL S
Sbjct: 821 WKSATNLPQLKELYQLS 837
>gi|325967622|ref|YP_004243814.1| ATP-dependent DNA ligase I [Vulcanisaeta moutnovskia 768-28]
gi|323706825|gb|ADY00312.1| DNA ligase I, ATP-dependent Dnl1 [Vulcanisaeta moutnovskia 768-28]
Length = 606
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 137/505 (27%), Positives = 235/505 (46%), Gaps = 70/505 (13%)
Query: 124 LTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ ++ D L +A + K+ +L L + +E K+I ++ L+LG+++ +
Sbjct: 128 LTMGKVYDTLMSIAKASGEGAQDTKVKLLIYLFSRAKPEEAKYIARFVIGRLRLGVADMT 187
Query: 181 IF------HEFHPDA-EDLFNVTCDLKLVCEKLKDRNQRH-KRQDIEVGKAVRPQLAMRI 232
I ++ DA E +++ DL + + + Q + + G ++P LA R+
Sbjct: 188 ILDALSDAYKVSRDALERAYHIYPDLGYIAKMVAQEGQNALSKIHVTPGVPIQPMLAERL 247
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIHKN-GSEIHYFSRSFLDHSEYGHA-MSKIIEQ 290
A KL G +V E K+DG+R Q+H+ E+ FSR L++ Y + +++ +++
Sbjct: 248 STAAEILAKLGGTAMV-EYKYDGERAQVHRTRDGEVRIFSRR-LENITYAYPDVAEYVKE 305
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCY----FAFDVLYV 346
+ I++GE++ D F F QE+ R + Y F FDV+YV
Sbjct: 306 AIDAKEYIVEGEIIAIDPDTGEFRPF---QELMHRKRKHDVKEAMKEYPVNIFLFDVMYV 362
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
+ + L +R L +++KPS+ H+ W ++ ++ +E++
Sbjct: 363 DGQDLTNLPLIDRKRRLLEILKPSE------------YVHL-----ATWRVI-NDAEELD 404
Query: 407 KFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGS 463
KFF E I + EG++ K + S +E G R W+K K +Y +D LD++++G ++G
Sbjct: 405 KFFHEAISDGCEGVMCKSIKADSIYEMGARGWLWIKYKRDYRSELTDTLDLVVVGAFWGR 464
Query: 464 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
G+R G L+A A P D +F + +VG+G +DE+L KLK Y P
Sbjct: 465 GKRAGTYGALLIA-AYDPKTD----QFYTVSKVGSGFTDEDL----VKLKQMLDPYRIPH 515
Query: 524 RAPPSFYQVTNNSKERPDVW------IESPEKSIILSI--TSDIRTIRSEVFSAPYSLRF 575
R P SK PDVW +E I LS T + ++RS+V A +RF
Sbjct: 516 RHPRVV------SKMEPDVWFVPAVVLEIIGAEITLSPLHTCCVGSVRSDVGLA---IRF 566
Query: 576 PRID-RVRYDKPWHDCLDVQSFVEL 599
PR R R DK V +E+
Sbjct: 567 PRFTGRYRTDKSPEQATTVDEILEM 591
>gi|307201128|gb|EFN81039.1| DNA ligase 4 [Harpegnathos saltator]
Length = 806
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 159/652 (24%), Positives = 279/652 (42%), Gaps = 94/652 (14%)
Query: 29 RSKFRKFLDTYCDSVD--YFSALRLILPSL----DRERGSYGLKESVLANCLIDALGMSK 82
R+ K +T+ ++D + LRLILP D + K S L + +SK
Sbjct: 42 RNNASKVQNTHGGNLDEIMYPILRLILPKYYSIKDYDSRKKETKHS-LTILYANVCQLSK 100
Query: 83 DSADAVRLINWRKGGAAPNAGN-FPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSEN 141
S D L+N R + N F A V Q+ S + + ++N LD + S++
Sbjct: 101 QSDDYKALVNSRNLTSDKFEKNDFAECAYFVFQKFLSQHSTKIALADINKFLDDI-SNKK 159
Query: 142 RAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKL 201
+KI + + ++ +MKW+ IIL+DL+LGI AED+ +V D+K
Sbjct: 160 MQQKIELFRLIFRRMTGFQMKWLTRIILQDLQLGIK-----------AEDILDV-LDIKS 207
Query: 202 VCEKLKD----RNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDR 257
L++ + + +Q++++ +P L R+ K ++ K+DG+R
Sbjct: 208 YNTSLRNCTIYDSSKKMKQNVQLFSHFKPMLLERLSIDDICKLFSTSKNYYVQTKYDGER 267
Query: 258 IQIHKNGSEIHYFSRSFLDHSE---------YGHAMSKIIEQNVLVDRC---ILDGEMLV 305
QIH + YF+R+ + ++ G+ K + L C ILDGE++V
Sbjct: 268 SQIHMSHGRYKYFTRNGFEITKKPLLGGIDSLGYLSVKFAQ--FLDPDCTSFILDGELMV 325
Query: 306 WDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVI----HQSLKERHE 361
W+ G ++ G + C+ AFD++ D S++ H+ LK+
Sbjct: 326 WNKKEKALLTKGMKVDVKFLQTVG---PYRPCFIAFDIIMYNDISLLDIPYHRRLKQLEN 382
Query: 362 LLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK-ETIENRDEGI 420
LL K HG S C + + ++E F+ + ++ ++EGI
Sbjct: 383 LLIKA--------------HGAIS-------ACETTPIDDRTQLEDIFRSKCLQGKEEGI 421
Query: 421 VLKDLGSKWEPGDR-SGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALA 478
V+K ++P R G K+K EY DLD++I+GG Y + ++ ++ A
Sbjct: 422 VVKRHDFLYKPNVRDGGGCYKIKAEYSDNLVQDLDLIILGGSYTKNKFPKQLNSLIMG-A 480
Query: 479 ERPAP--DTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNS 536
PA + +P F+ V GLS EE + + + ++ + P + +T +
Sbjct: 481 AIPASSEEEHPSSFMVIVSVSNGLSKEEWNFLEERFSS-----KWVEECPENI--LTYAT 533
Query: 537 KERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSF 596
+ + D+W+ PE S+IL+I + + S YS RFPR+ +R DKPW+ +
Sbjct: 534 RTQSDMWLR-PEDSMILTIRA-TEMVPSNKHLIGYSFRFPRVMHIRQDKPWYSACTNKEI 591
Query: 597 VELVHSSNGTTQKGK------------EYGGLQDDKPKQFRSSRKGEKKNVS 636
+ LV + + K E G DKP+ G+ +V+
Sbjct: 592 LSLVKNKKAIHKLIKPEANLHNNEDLLELSGCTSDKPRILTRPWSGQIAHVA 643
>gi|255513815|gb|EET90080.1| DNA ligase I, ATP-dependent Dnl1 [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 590
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 140/573 (24%), Positives = 257/573 (44%), Gaps = 87/573 (15%)
Query: 63 YGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRR---QGM 119
+GL E + + A G +K+ D +++K G + G + AE L+ + + M
Sbjct: 58 FGLAEKMAEEAIAIATGYTKEETDR----DYKKSG---DLG----ITAENLKSKSKLKPM 106
Query: 120 ISGGLTIKELNDLLDRLASSENRAEK---ISVLSTLIKKTNAQEMKWIIMIILKDLKLGI 176
+ T+ E+ + + +++ + K I +LS LI + E ++++ L L+LG+
Sbjct: 107 LQKKYTVIEVYNTMKKISETSGSGSKDIKIRLLSELIASSAGIEARYLVRYPLGQLRLGL 166
Query: 177 SEKSIFHEF----------HPDAEDLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVR 225
+ +I E +N+ DL V ++L + R + + + K +R
Sbjct: 167 GDATILESLSIAKTGSRVEKETLERAYNLCSDLGYVGKELFEGGIGRVRNFKVAMFKPIR 226
Query: 226 PQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMS 285
P LA R+ A +K+ G+ +E K+DG R Q+H +G ++ FSR D ++ ++
Sbjct: 227 PALAERLPTAEEILKKMGGR-CAVEQKYDGFRCQVHMHGKKVRIFSRRLEDTTQMFPDIA 285
Query: 286 KIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSN------QEIAKAARDGLSSDRQLCYF 339
+ V D I +GE L ++ + F F EI K A + L
Sbjct: 286 DAALKEVHSDDIIFEGEALAYNEATGEFLPFQETIQRKRKHEIGKKA-----IELPLHLI 340
Query: 340 AFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVA 399
AFD++Y S +++ + R ++L+K+++ S T++P + ++
Sbjct: 341 AFDLMYANGKSYMNEEYETRRKMLEKLLEGST----TIIPSN--------------RIIT 382
Query: 400 HNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIG 458
+ E+E+FF+ ++EN EGIV KDL + + G R W+K+K Y SD +DV I+G
Sbjct: 383 DSSKEMEEFFEASVENGLEGIVAKDLKAPYIAGARKFSWIKMKRSYKGELSDTIDVAIVG 442
Query: 459 GYYGSGRRGG-EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDE---ELDAVVTKLKP 514
Y G G R + L A+ + F + R+G+G +++ EL+ +++K+K
Sbjct: 443 YYLGRGSRASFKFGGLLCAVYNKKRD-----MFETISRLGSGFTEKQMSELEELLSKIKT 497
Query: 515 YFRKYEYPKRAPPSF-----YQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSA 569
+ P F Y VT R D +SP + + R + + A
Sbjct: 498 QAKPARVDSLVKPDFWVYPKYVVTV----RADEITKSP-------MHTCGREKQEDGTEA 546
Query: 570 PYSLRFPRI---DRVRYDKPWHDCLDVQSFVEL 599
Y+LRFPR+ + +R DK + +E+
Sbjct: 547 GYALRFPRLVGEEAIRSDKSVEEVNQTSEIIEM 579
>gi|167521445|ref|XP_001745061.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776675|gb|EDQ90294.1| predicted protein [Monosiga brevicollis MX1]
Length = 657
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 194/421 (46%), Gaps = 57/421 (13%)
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG-SEIHYFSRSFLD 276
I G ++P LA + GK E K+DG+R Q+H + + FSR+ D
Sbjct: 267 ITPGIPMKPMLAHPTKGISEVMDRFDGKTFACEYKYDGERAQVHMSKEGRVCIFSRNSED 326
Query: 277 HS-EYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEF-----GSNQEIAKAARDG 329
++ +Y + +I + + V +LD E + +D + F GS+Q + + R
Sbjct: 327 NTTKYPDIVGRIRDAMSQHVTDFVLDCEAVAYDIVERQILPFQACPCGSSQRLVLSTRKR 386
Query: 330 LSSDR-----QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLN 384
++ Q+C FAFD+LY+ S++ ++ + R L++ +
Sbjct: 387 KDANEEDIKVQVCLFAFDLLYLNGESLVRENFQTRRNKLREAFQ---------------- 430
Query: 385 SHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLK 442
HV Q SL+ ++VDE+ ++ +I+ EG+++K L + +E RS WLKLK
Sbjct: 431 -HVEGQFHFANSLITNDVDEINEYLDLSIKESCEGLMVKTLEVDATYEIAKRSHSWLKLK 489
Query: 443 PEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLS 501
+Y+ G LD+++IG + G G+R G FL+A DT F S C++GTG S
Sbjct: 490 KDYLDGVGDTLDLVVIGAWIGKGKRTGTYGAFLLA-----CHDTETEEFQSICKIGTGFS 544
Query: 502 DEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSIT 556
DE+L T LK + PS+Y+ ++ +PDVW +PE K+ LSI+
Sbjct: 545 DEDLKGFATSLKAHVVP------TAPSYYRY--DAGLKPDVWF-APEQVWEVKAADLSIS 595
Query: 557 SDIRTIRSEVFSAP---YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEY 613
R + + P SLRFPR R+R DK D + ++ S +
Sbjct: 596 P--RHLAAAGLVDPNKGISLRFPRFLRIREDKKADDATSAEQVADMYLSQEQIKNNNQTR 653
Query: 614 G 614
G
Sbjct: 654 G 654
>gi|156102559|ref|XP_001616972.1| DNA ligase 1 precursor [Plasmodium vivax Sal-1]
gi|148805846|gb|EDL47245.1| DNA ligase 1 precursor, putative [Plasmodium vivax]
Length = 933
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 192/421 (45%), Gaps = 47/421 (11%)
Query: 208 DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSE 266
D N K+ ++ G V+P LA + + E K+DG+R QIH +
Sbjct: 540 DMNTLSKKCTVKAGLPVQPMLAKPTKGIQEVLDRFNNVTFTCEYKYDGERAQIHYIDKDN 599
Query: 267 IHYFSRSFLDHSEYGHAMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAK 324
I FSR+ +E + +I+ ++ CI+D E++ +D + F +
Sbjct: 600 IKIFSRNLETMTEKYPDVIQIVRDQIISGATECIIDSEVVAYDIENKKILPFQVLTTRKR 659
Query: 325 AARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLN 384
D + ++C F FD++ VI + L+ R +LL ++K G L
Sbjct: 660 KDVDIENIKVKICLFPFDLICCNGVPVIKEPLEIRRKLLYSLLKCKDGVL---------- 709
Query: 385 SHVRPQGEPCWSLVA--HNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLK 440
C++ + +N+++++ F ++ IEN EG+++K L + +EP RS WLK
Sbjct: 710 ---------CYATHSEMNNIEDIDIFLQDAIENNCEGLMVKTLLDNASYEPSRRSLNWLK 760
Query: 441 LKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 499
+K +YI SD +D++ I GYYG G+R G F++A ++ F + C+ GTG
Sbjct: 761 VKKDYIEGLSDSVDLVPIAGYYGKGKRSGVYGAFVLA-----TYNSETENFQTVCKAGTG 815
Query: 500 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSI 555
SDE L ++ L P + S+Y+V++ K PDVW ++ K+ LS+
Sbjct: 816 FSDEVLGSLYETLSDKI----IPNKK--SYYEVSD--KLNPDVWFDAHYVWEVKAADLSL 867
Query: 556 TSDIRTIRSEVFS--APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEY 613
S + T V+S LRFPR R+R DK Q V+ + + + +Y
Sbjct: 868 -SPVHTAAIGVYSDDKGIGLRFPRFLRLREDKNAEQATTSQQIVDFYEAQFTSNKNKNDY 926
Query: 614 G 614
Sbjct: 927 N 927
>gi|358338704|dbj|GAA28692.2| DNA ligase 1 [Clonorchis sinensis]
Length = 553
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 146/577 (25%), Positives = 244/577 (42%), Gaps = 115/577 (19%)
Query: 124 LTIKELNDLLDRLAS---SENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ + L +AS + ++A+K+ + +L+ E K++I + L++G++E+S
Sbjct: 7 LTVSMVFSKLKEIASMSGNSSQAKKVEKICSLLVACRECEAKYLIRSLSGKLRIGLAEQS 66
Query: 181 IFHE---------FHPDA-------EDLFNVTCDL------------------------- 199
+ FH A L +V+ +
Sbjct: 67 VLTALGQAAAVTPFHSAAAVKVGVPSRLLDVSTGVSNEQWKTRVEACVANVKKAYCVCPN 126
Query: 200 --KLVCEKLKD-RNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGD 256
KLV L D + H I G V+P LA ++ + E K+DG+
Sbjct: 127 YDKLVAGLLADGPDGLHFHCFITPGIPVKPMLAHPTRGVVDVLKRFDEADFTCEYKYDGE 186
Query: 257 RIQIHK-NGSEIHYFSRSFLDH-SEY----------------------GHAMSKIIEQNV 292
R QIH + +SR+ D+ S+Y H S+ +N
Sbjct: 187 RAQIHVLDPRTCRVYSRNQEDNTSKYPDIVNTLMPRVLQSAKLTEAALQHMGSEADSKNT 246
Query: 293 LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVI 352
V+ CILD E++ WD F + D + Q+C +AFD+L++ S+I
Sbjct: 247 AVESCILDAEVVAWDRQGGHILPFQVLSTRKRKDVDEAAVKVQVCVYAFDILFINGVSLI 306
Query: 353 HQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKET 412
+ L+ R E+++ ET HG + SL + + +++ F +E+
Sbjct: 307 EKPLRVRREIIR----------ETFSQIHG-------EFMLATSLDSSDTEQIASFLEES 349
Query: 413 IENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGE 469
I+ EG+++K L S +E RS WLKLK +Y+ G LD+++IGG++GSG+R G
Sbjct: 350 IKGNCEGLMVKTLDRNSTYEIAKRSHNWLKLKKDYLDNVGDTLDLVVIGGFHGSGKRAGR 409
Query: 470 VAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSF 529
FL+A D + + C++GTG++DE+L K YF+ +Y ++
Sbjct: 410 YGGFLLACY-----DAECEEYQTICKIGTGMTDEDL----AKFSAYFK--DYIVDNAKAY 458
Query: 530 YQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSAP---YSLRFPRIDRVR 582
YQ PD W E + K+ LSI+ + + P SLRFPR R+R
Sbjct: 459 YQFAPGLV--PDHWFEPTQVWEVKAADLSISPAHKAAAG--LADPEKGISLRFPRFLRIR 514
Query: 583 YDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
DK D Q E+ S K ++ G +Q++
Sbjct: 515 EDKKPEDATTAQQVYEMYKSQEQI--KNQDGGQVQNE 549
>gi|345784854|ref|XP_003432611.1| PREDICTED: DNA ligase 1 [Canis lupus familiaris]
Length = 914
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 154/596 (25%), Positives = 245/596 (41%), Gaps = 100/596 (16%)
Query: 45 YFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGN 104
Y S RL P E G+ + VL + A G DS A G A N+ +
Sbjct: 328 YLSLNRLGPPQQGLE---LGVGDGVLLKAVAQATGRQLDSVKAEAAEKGDVGLVAENSRS 384
Query: 105 FPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWI 164
++ + + G+ K D+ RLA S + A+KI V+ L E ++I
Sbjct: 385 ----TQRLMLPPPALTAAGVFAK-FRDIA-RLAGSASTAKKIDVIKGLFVACRHSEARFI 438
Query: 165 IMIILKDLKLGISEKSIF-------------HEFHPDAED-------------------- 191
+ L+LG++E+S+ EF P D
Sbjct: 439 ARALSGRLRLGLAEQSVLAALAQAVSLTPPGQEFPPAVVDAGKGRTAEARKTWLEEQGMI 498
Query: 192 ---LFNVTCDLKLVCEKLKDRNQRHKRQD--IEVGKAVRPQLAMRIGDAHAAWRKLHGKE 246
F DL + L + H + + G ++P LA ++
Sbjct: 499 LKQTFCEVPDLDRIIPVLLEHGLEHLPEHCRLSPGVPLKPMLAHPTRGVSEVLKRFEEAA 558
Query: 247 VVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEM 303
E K+DG R QIH G E+ FSR+ D++ +Y +S+I + + V ILD E
Sbjct: 559 FTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEA 618
Query: 304 LVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELL 363
+ WD + F + D Q+C +AFD++Y+ S++ + L R +LL
Sbjct: 619 VAWDREKKQIQPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLL 678
Query: 364 QKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW--SLVAHNVDEVEKFFKETIENRDEGIV 421
++ + V +GE + SL + D++ +F ++++++ EG++
Sbjct: 679 RE-------------------NFVETEGEFVFATSLDTKDTDQIAEFLEQSVKDSCEGLM 719
Query: 422 LK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALA 478
+K D+ + +E RS WLKLK +Y+ G LD+++IG Y G G+R G FL+A
Sbjct: 720 VKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-- 777
Query: 479 ERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK----PYFRKYEYPKRAPPSFYQVTN 534
A D + C++GTG SDEEL+ +L+ P R Y V
Sbjct: 778 ---AYDEESEELQAICKLGTGFSDEELEEHYQRLQALVLPTPRSY------------VRV 822
Query: 535 NSKERPDVWIESPE----KSIILSITSDIRTIRSEV-FSAPYSLRFPRIDRVRYDK 585
+ PD W++ K LS++ R V SLRFPR RVR DK
Sbjct: 823 DGAVAPDHWLDPSAVWEVKCADLSLSPIYPAARGLVDGEKGISLRFPRFIRVREDK 878
>gi|284161662|ref|YP_003400285.1| ATP-dependent DNA ligase I [Archaeoglobus profundus DSM 5631]
gi|284011659|gb|ADB57612.1| DNA ligase I, ATP-dependent Dnl1 [Archaeoglobus profundus DSM 5631]
Length = 555
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 154/581 (26%), Positives = 267/581 (45%), Gaps = 99/581 (17%)
Query: 42 SVDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPN 101
+V +F R+ P +RE G+ ++ L + G+SK+ +++ +
Sbjct: 41 NVVHFLMGRVFPPWDERE---LGVGIGLVCKALENVSGVSKEKIESM----------IKD 87
Query: 102 AGNFPMVAAEVLQRR--QGMISGGLTIKELNDLLDRLASSE---NRAEKISVLSTLIKKT 156
G+ +VA +L+ R + + + LTIK + ++ D +AS E ++ KI +L+ L
Sbjct: 88 YGDLGLVAERLLKGRGIKSLFAEELTIKRVREIFDEIASLEGEGSQKRKILLLTGLYGSA 147
Query: 157 NAQEMKWIIMIILKDLKLGISE----KSIFHEFHPDAEDL---FNVTCDLKLVCEKLKDR 209
+ E +++ +IL +++LG+ E +I + DAE + + + DL V K+
Sbjct: 148 SPIEARYLTRLILGEMRLGVGEGIMRDAIARAWGVDAELVERAYMIVNDLGRVAIIAKNE 207
Query: 210 NQRH-KRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIH 268
+ K I++ V+ LA A R++ K + +E K+DG R+Q+H ++
Sbjct: 208 GKEGLKNVKIQLHIPVKMMLAQVAESIEQALREM--KTIAVEWKYDGSRVQVHYGNGKVT 265
Query: 269 YFSRSFLDHSEYGHAMSKIIEQNVLVDRC-----ILDGEML-VWDTSLNRFAE----FGS 318
+SR + ++ A+ +I+E+ + +C ILDGE++ V D F E F
Sbjct: 266 IYSRRLENVTK---ALPEIVEE---IKKCVKEGVILDGEVIAVKDGKPMPFQEVLRRFRR 319
Query: 319 NQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLV 378
EI KA + YF FD+LY D VI LKER ++L+ V+K SK
Sbjct: 320 KHEITKA----MEKIPLEAYF-FDILY-NDGEVIDLPLKERRKILESVIKESK------- 366
Query: 379 PDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKW 438
+ Q +V + +E+E+ FKE ++ EG +LK+ S + PG R W
Sbjct: 367 -----IIKIAKQ------VVTNKKEEIERVFKEALDAGHEGAMLKNPNSPYTPGKRGRHW 415
Query: 439 LKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
LKLK LD++++GG +G GRR ++ F +A D + + +VGT
Sbjct: 416 LKLK----EVMETLDLVVVGGEWGEGRRSHLISSFELA-----CLDPRTGKLLRIGQVGT 466
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G +DE+L+ + KP K E K ++ +P + E + I
Sbjct: 467 GFTDEDLEELTELFKPLIVKEEGKK----VYF--------KPKIVFEVAYQEI------- 507
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+S + + ++LRFPR R+R DK D + EL
Sbjct: 508 ---QKSPKYESGFALRFPRFVRLRDDKGVEDADTIDRVREL 545
>gi|145590341|ref|YP_001152343.1| ATP-dependent DNA ligase [Pyrobaculum arsenaticum DSM 13514]
gi|166215375|sp|A4WH24.1|DNLI_PYRAR RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|145282109|gb|ABP49691.1| DNA ligase I, ATP-dependent Dnl1 [Pyrobaculum arsenaticum DSM
13514]
Length = 584
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 158/604 (26%), Positives = 259/604 (42%), Gaps = 74/604 (12%)
Query: 30 SKFRKFLDTYCDSVDYFSALRLILPSLDR--ERGSYGLKESVLANCLIDALGMSKDSADA 87
S F+K L D V Y LIL L E G+ E + L A G S+ ++
Sbjct: 28 SLFKKALPEEIDKVIY-----LILGDLRPPWEGLELGVGEKLCLRALAKATGTSQAELES 82
Query: 88 VRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGG----LTIKELNDLLDRLASSENRA 143
+ ++K G A + ++ +R G+++ G L + E+ D L ++A +
Sbjct: 83 M----YKKTGDIGEAARRALASS----KRPGLLAFGSQKPLEVSEVYDALIKVARATGEG 134
Query: 144 E---KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEF-------HPDAEDLF 193
KI++LS+L +++ +E K+I ++ L+LG+++ +I D E +
Sbjct: 135 AQDMKIALLSSLFARSSPEEGKYIARFVVGKLRLGVADMTIIEALADAYGVRKEDLERAY 194
Query: 194 NVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKF 253
+V DL + KL + + G V P LA R+ + KL G + E K+
Sbjct: 195 HVYPDLGHLA-KLVASGKPLDEVKVTPGVPVLPMLAQRLSSSSEILAKLGGA-AICEYKY 252
Query: 254 DGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRF 313
DG+R QIH + S + FSR D + + K + + V IL+GE++ D
Sbjct: 253 DGERAQIHISQSGVRIFSRRLEDITHAYPDVVKAVREAVSAREAILEGEIVAVDPDTGEM 312
Query: 314 AEFGSNQEIAKAARDGLSSDRQLCY----FAFDVLYVGDTSVIHQSLKERHELLQKVVKP 369
F QE+ R + Y + FD++YV + ++ L R L ++V
Sbjct: 313 LPF---QELMHRKRKHEVAAAMEMYPTVLYLFDIVYVDGEDLTNEPLIYRRVKLSEIVHE 369
Query: 370 S-KGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK 428
S K ++ W + + D V+ FF E + EG++ K S+
Sbjct: 370 SDKVQIAK------------------WQMF-DDPDTVDVFFHEAVSVGTEGLICKSPTSE 410
Query: 429 WEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYP 487
+E G R W+K K +Y D +D++++G +YG G+R G FL+A A P+ D
Sbjct: 411 YEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFYGRGKRAGLYGAFLLA-AYDPSSDM-- 467
Query: 488 RRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESP 547
F + C+VG+G +D +L + L+P + P R P ++ + P V IE
Sbjct: 468 --FYTVCKVGSGFTDADLKKMYEILQP----LKIPHRHPRVSSKMEADVWFVPQVVIEVI 521
Query: 548 EKSIILSI--TSDIRTIRSEVFSAPYSLRFPRID-RVRYDKPWHDCLDVQSFVELVHSSN 604
I LS T + +R V A +RFPR R R DK V +EL
Sbjct: 522 GAEITLSPLHTCCLGAVRPGVGLA---VRFPRFTGRYRTDKGPEQATTVAEMLELYKRQK 578
Query: 605 GTTQ 608
Q
Sbjct: 579 KVAQ 582
>gi|226293865|gb|EEH49285.1| DNA ligase [Paracoccidioides brasiliensis Pb18]
Length = 912
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 150/608 (24%), Positives = 257/608 (42%), Gaps = 125/608 (20%)
Query: 103 GNFPMVAAEVLQRRQGMISGG-LTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNA 158
G+ +VAA+ + M LT++ ++D L +A ++ +KIS + L+ +A
Sbjct: 336 GDLGLVAAKSRSNQPTMFKPKPLTVRGVHDGLLAIAKTQGHGSQDKKISAIKKLLSSADA 395
Query: 159 -------------------QEMKWIIMIILKDLKLGISEKSIF---------HEFH---- 186
E K+II + L+LG++E+++ HE
Sbjct: 396 AVAGKGSKGIDITHNKGGPSEAKFIIRFLEGKLRLGLAERTVLVALAHAMVAHEVELQGK 455
Query: 187 --PDAEDLFNVTCDLKLVCEKLKDR-------------NQRHKRQDIEVGKAVRPQLAMR 231
P E L LK V +L N + K + ++ G ++P LA
Sbjct: 456 KAPTTEQLAKGEEILKSVYSELPSYEVIIPAMLEHGIFNLKDKCK-LQPGVPLKPMLAKP 514
Query: 232 IGDAHAAWRKLHGKEVVIECKFDGDRIQIH------------------KNGSEI-HYFSR 272
+ GK E K+DG+R QIH K+G + FSR
Sbjct: 515 TKSITEVLDRFEGKNFTCEYKYDGERAQIHYISREAISEYRATASTLQKDGGGVCAIFSR 574
Query: 273 SFLDHSE-YGHAMSKIIEQNVL---VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARD 328
+ D S+ Y +SK+ +N + +LD E + WD + + F Q + + +D
Sbjct: 575 NSEDLSKKYPDILSKL--ENWVKKGTTSFVLDCETVAWDVAGKKVLPF--QQLMTRKRKD 630
Query: 329 GLSSDRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSH 386
+ D ++ C FAFD+L++ + ++L+ER LL + P +G E + HG S
Sbjct: 631 VKAEDVKVKVCVFAFDLLFLNGEPTVKKTLRERRSLLHEAFVPVEG--EFVFAQHGDTS- 687
Query: 387 VRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKP 443
+++E++ E+++ EG+++K L S +EP RS WLK+K
Sbjct: 688 --------------DLEEIQTLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKK 733
Query: 444 EYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSD 502
+Y+ G LD++++G YYG G+R FL+A A P Y + C +GTG S+
Sbjct: 734 DYLAGIGDSLDLVVLGAYYGRGKRTSVYGAFLLA-AYNPTTQNYE----TICNIGTGFSE 788
Query: 503 EELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITS 557
L+ + + L P P FY ++ K++PDVW E P+ K+ L+++
Sbjct: 789 ALLEELHSALSPLVIDR------PKPFYDHSSVPKDQPDVWFE-PKYVWEVKAADLTLSP 841
Query: 558 DIRTIRSEVFSAP------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 611
+ E+ + SLRFPR + R DK + ++ ++
Sbjct: 842 RYKAAADEILGSENGTAKGISLRFPRYIKSREDKKPDEATTTRTVADMYRKQESVANVAA 901
Query: 612 EYGGLQDD 619
GG+ DD
Sbjct: 902 AKGGVDDD 909
>gi|409083536|gb|EKM83893.1| hypothetical protein AGABI1DRAFT_51454 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 822
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 160/652 (24%), Positives = 287/652 (44%), Gaps = 114/652 (17%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV---DYFSALRLILPSLDRERGSY-GLK 66
L F+ I+ T +K S FL D+ S L+ + ++R Y G++
Sbjct: 200 ALAKTFSLIESTTKRLEKNSYLTSFLLLVIQRSAKGDWNSLLQTVYLCINRLSPDYEGIE 259
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGG-LT 125
+ + LI A+ S + AV + ++ G+ +VA ++ + LT
Sbjct: 260 LGIGESLLIKAIAESTGRSLAVIKADLKR------EGDLGLVAMNSKTSQKTLFKPKPLT 313
Query: 126 IKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
+ + L +A++ ++A+K+S+++ L+ E K+II + L++G +E+S+
Sbjct: 314 LPFVFSHLKDIATTSGHSSQAKKVSIITKLLAACQGLEAKYIIRSLEGKLRIGNAERSVL 373
Query: 183 HEFHPDA----EDLFNVTCDLKLVCEKLKDRNQRHKRQDIEV------------------ 220
++ N + + ++L++ R K E+
Sbjct: 374 VAIANAVVLAEKEASNKNWSNEKLIKRLEESTLRIKSVYSELPSYDKVIPALLNVGIDGL 433
Query: 221 --------GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK--NGSEIHYF 270
G ++P LA + + E K+DG+R Q+HK +GS + F
Sbjct: 434 EEVCKLTPGVPLKPMLAKPTKAIGEVLDRFENQHFTCEYKYDGERAQVHKLEDGS-VAVF 492
Query: 271 SRSFLDHSEYGHAMSKIIEQNVLVDRCI--------LDGEMLVWDTSLNRFAEFGSNQEI 322
SR+ D S+ ++EQ + +CI LD E + D + F QE+
Sbjct: 493 SRNSEDMSK---KYPDLVEQ---LPKCIKETTKSFVLDAEAVAIDRKTGKLMPF---QEL 543
Query: 323 AKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVP 379
++ R + + ++C FAFD+LY+ ++ + L ER +LL LE P
Sbjct: 544 SRRKRKDVKVEDIQVRVCLFAFDLLYLNGEPLLRKPLSERRKLL----------LEHFQP 593
Query: 380 DHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSG 436
G + + + +V+E++ F +E++++ EG+++K L S +EP RS
Sbjct: 594 IDGEFNFAKASN-------SQSVEEIQAFLEESVKDGCEGLMVKMLDGEPSFYEPSRRSV 646
Query: 437 KWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCR 495
WLKLK +Y+ G LD++++GGYYG G+R FL+A + PD+ + + C+
Sbjct: 647 NWLKLKKDYLAGVGDSLDLVVVGGYYGKGKRTNVYGAFLLACFD---PDS--EEYQTICK 701
Query: 496 VGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI 555
+GTG SDE L + +LKP + E + N +PD+W E K + +
Sbjct: 702 IGTGFSDEILQSHYNELKPL--ELEKARGD-------VNIGGAKPDIWFEP--KIVWEVL 750
Query: 556 TSDIRTIRSEVFSAPY--------SLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
T+D+ S +++A + SLRFPR RVR DK D + E+
Sbjct: 751 TADLSL--SPIYTAAHGTVDERGISLRFPRFIRVRDDKHVEDATASEQVAEM 800
>gi|403171394|ref|XP_003330631.2| DNA ligase 1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
gi|375169165|gb|EFP86212.2| DNA ligase 1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
Length = 788
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 133/530 (25%), Positives = 232/530 (43%), Gaps = 104/530 (19%)
Query: 141 NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDA----------- 189
++A+K+ +++ L+ +E K+II + L++G++E+++ A
Sbjct: 282 SQAKKVGIITKLLASCQGEEAKFIIRSLEGKLRIGLAERTVLVALANAAVRTGVGNKSNS 341
Query: 190 ------EDL--------------FNVTCDLKLVCEKLKDRNQRHKRQDIEV--GKAVRPQ 227
EDL F+ LV L + R++ ++ G ++P
Sbjct: 342 KRKSSSEDLAKDILEGTEIVKAVFSEIPSYDLVIPALLQGGIKGLRENCKLTPGVPLKPM 401
Query: 228 LAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHS------- 278
LA + G + E K+DG+R QIH +GS I FSR+ + S
Sbjct: 402 LAKPTKAISEVLDRFEGHKFTCEYKYDGERAQIHFLSDGS-ISIFSRNSENMSVKYPDMV 460
Query: 279 -EYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR--- 334
+ A+ K + +N +LD E + WD S + F QE++K R + ++
Sbjct: 461 DQLPRAIKKDVTRNF-----VLDAEAVAWDRSTKKILPF---QELSKRKRKDVKAEEITI 512
Query: 335 QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPC 394
Q+ FAFD+LY+ D +I+ R LL++ +G
Sbjct: 513 QVHIFAFDLLYLNDQPLINTDFSHRRSLLKEHFNQIEGEFSFAT---------------- 556
Query: 395 WSLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GS 450
++ NV+E++ F +++++ EG+++K L + +EP RS WLK+K +Y+ G
Sbjct: 557 -AVDVDNVEEIQTFLEQSVKAGCEGLMVKMLDGQSAHYEPSRRSMNWLKVKKDYLAGIGD 615
Query: 451 DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVT 510
LD++++G Y+G G+R FL+A + P ++Y + C++GTG S+E LD + T
Sbjct: 616 SLDLVVVGAYHGKGKRTAVYGAFLLACYD-PETESYQ----TICKLGTGFSEEVLDCLHT 670
Query: 511 KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP 570
KL P ++Y V + +PDVW E K + + +D+ S V+SA
Sbjct: 671 KLHP------LELTVKKNYYDV---GESKPDVWFEP--KLVWEVLAADLSL--SPVYSAA 717
Query: 571 ----------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG 610
SLRFPR + R DK D + E+ T +
Sbjct: 718 KGLCGDGTRGVSLRFPRYIKERDDKNGEDATSSEQVAEMYKKQASTVDQA 767
>gi|156549819|ref|XP_001606591.1| PREDICTED: DNA ligase 1-like [Nasonia vitripennis]
Length = 1128
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 193/424 (45%), Gaps = 69/424 (16%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-KNGSEIHYFSRSFLDH-S 278
G ++P LA + G + E K+DG+R QIH + + +SR+ D+ S
Sbjct: 747 GIPLKPMLAHPTKGIQEVLSRFEGLKFTCEYKYDGERAQIHIQEDGAVKIYSRNQEDNTS 806
Query: 279 EYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR-DGLSSD--R 334
+Y +++I ++ V C+LD E + WD + F Q ++ R D +D
Sbjct: 807 KYPDIINRISNTRHESVKSCVLDCEAVAWDKEKKQILPF---QVLSTRKRKDANEADIKV 863
Query: 335 QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPC 394
Q+C F FD+LY ++++ + LK+R ELL++ K +GE C
Sbjct: 864 QVCVFMFDLLYFNGSALVEEPLKKRRELLKEYFK-------------------EVEGEWC 904
Query: 395 W--SLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-G 449
+ S+ +DEV++F E+I+ EG+++K L + +E RS WLKLK +Y+ G
Sbjct: 905 FAKSVDVQTMDEVQEFLDESIKGNCEGLMIKTLEKEATYEIAKRSRNWLKLKKDYLEGVG 964
Query: 450 SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL---- 505
LD+++IGGY G G+R G FL+A D + S C++GTG S+++L
Sbjct: 965 DTLDLVVIGGYIGKGKRTGTYGGFLLACY-----DQENEEYQSICKIGTGFSEDDLTKHT 1019
Query: 506 ----DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSIT 556
+ V+ + K Y+R +S PD W E P+ K LS++
Sbjct: 1020 EALKECVIDQAKSYYR----------------CDSSLEPDHWFE-PKLVWEVKCADLSLS 1062
Query: 557 SDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGG 615
+ V SLRFPR RVR DK D Q ++ S + G
Sbjct: 1063 PVHGAAKGIVDPEKGISLRFPRFIRVRDDKNSEDATSAQQIADMYLSQEQIKNQTSSAGP 1122
Query: 616 LQDD 619
++D
Sbjct: 1123 AEED 1126
>gi|358398200|gb|EHK47558.1| hypothetical protein TRIATDRAFT_133844 [Trichoderma atroviride IMI
206040]
Length = 873
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 132/518 (25%), Positives = 226/518 (43%), Gaps = 96/518 (18%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH-----PDAEDLFNVTCDLK 200
K E K+II + L+LG++++++ HE P DL N LK
Sbjct: 376 KGGPSEAKYIIRFLEGKLRLGLADRTVLVSLAQAVVAHEAEVKGKIPTTSDLENGESILK 435
Query: 201 LVCEKLKDRN------QRHKRQDIE------VGKAVRPQLAMRIGDAHAAWRKLHGKEVV 248
V +L + H ++ G ++P LA + G++
Sbjct: 436 TVYSELPSYDVIIPAMMEHGIANLRDHCKLRPGVPLKPMLAKPTKAITEVLDRFEGQKFT 495
Query: 249 IECKFDGDRIQIH---KNGSE-----------------IHYFSRSFLDHSE-YGHAMSKI 287
E K+DG+R QIH K+ ++ FSR+ D S+ Y + K+
Sbjct: 496 CEYKYDGERAQIHYVAKDAAQDLDASTQGSTKKIESGVACIFSRNSEDLSKKYPDVLEKL 555
Query: 288 ---IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD--RQLCYFAFD 342
I+++ ++D E + WD + + F Q + + +D + D ++C FAFD
Sbjct: 556 SAWIKEDT--KSFVVDCETVAWDVAEKKVLPF--QQLMTRKRKDVKAEDIKVKVCVFAFD 611
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
+LY+ +V+ +SL+ER ELL P++G + L +H+ Q +
Sbjct: 612 LLYLNGEAVVEKSLRERRELLSTAFVPTEGEFQ-------LATHMNGQ----------EL 654
Query: 403 DEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIG 458
DE++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G
Sbjct: 655 DEIQTFLDESVKASCEGLMVKMLDGTESGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVLG 714
Query: 459 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 518
YYG G+R FL+A P+ D Y + C +GTG S++ L+ + +L
Sbjct: 715 AYYGKGKRTSVYGAFLLACY-NPSTDVYE----TVCNIGTGFSEQVLEDLHAQLS----- 764
Query: 519 YEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP---- 570
E P FY + + +PDVW E K+ L+++ + E
Sbjct: 765 -EITIARPKPFYSHSAGGQHQPDVWFEPRYVWEVKTADLTLSPRYKAGWKEGVDPAGEKG 823
Query: 571 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 608
SLRFPR ++R DK ++ + E+ T+
Sbjct: 824 ISLRFPRFIKIRDDKKPNEATSSRQVAEMYRKQESVTK 861
>gi|389585979|dbj|GAB68708.1| DNA ligase 1 precursor [Plasmodium cynomolgi strain B]
Length = 920
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 192/418 (45%), Gaps = 48/418 (11%)
Query: 208 DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSE 266
D N K+ ++ G V+P LA + + E K+DG+R QIH +
Sbjct: 527 DMNTLSKKCTVKAGLPVQPMLAKPTKGIQEVLDRFNNVTFTCEYKYDGERAQIHYIDKDN 586
Query: 267 IHYFSRSFLDHSEYGHAMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAK 324
I FSR+ +E + +I+ ++ CI+D E++ +D + F +
Sbjct: 587 IKIFSRNLETMTEKYPDVIQIVRDQIISGATECIIDSEVVAYDIENKKILPFQVLTTRKR 646
Query: 325 AARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLN 384
D + ++C F FD++ VI + L+ R +LL ++K G L
Sbjct: 647 KDVDIENIKVKICLFPFDLICCNGVPVIKEPLEIRRKLLYSLLKCKDGVL---------- 696
Query: 385 SHVRPQGEPCWSLVA--HNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLK 440
C++ + +N+++++ F ++ IEN EG+++K L + +EP RS WLK
Sbjct: 697 ---------CYATHSEMNNIEDIDIFLQDAIENNCEGLMVKTLLDNASYEPSRRSLNWLK 747
Query: 441 LKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 499
+K +YI SD +D++ I GYYG G+R G F++A ++ F + C+ GTG
Sbjct: 748 VKKDYIEGLSDSVDLVPIAGYYGKGKRSGVYGAFVLA-----TYNSETENFQTVCKAGTG 802
Query: 500 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSI 555
SDE L ++ L P + S+Y+V++ K PDVW ++ K+ LS+
Sbjct: 803 FSDEILGSLYETLSDKI----IPNKK--SYYEVSD--KLNPDVWFDAHYVWEVKAADLSL 854
Query: 556 TSDIRTIRSEVFS--APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 611
S + T V+S LRFPR R+R DK Q V+ + + T K K
Sbjct: 855 -SPVHTAAIGVYSDDKGIGLRFPRFLRLREDKNAEQATTSQQIVDF-YEAQFTNNKNK 910
>gi|118379613|ref|XP_001022972.1| DNA ligase I [Tetrahymena thermophila]
gi|89304739|gb|EAS02727.1| DNA ligase I [Tetrahymena thermophila SB210]
Length = 816
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 135/514 (26%), Positives = 240/514 (46%), Gaps = 98/514 (19%)
Query: 129 LNDLLDRLASS--ENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSI----- 181
NDL A+S ++ AE+ ++ + + E + I + ++LK+G +EK++
Sbjct: 312 FNDLKSIAAASGKDSTAERERIIIKYMNEAKPDEACYFIRFLEQNLKIGAAEKTMQAALS 371
Query: 182 ------------FHEFHPDAEDL-----FNVT---CDLK---LVCEKLK----DRNQRHK 214
H + L FN+T C+ V E LK D ++
Sbjct: 372 KAFFEIAHNIKSNHVYTEQQNQLLEEFNFNITRCLCEFPNYYQVIETLKQIGKDISKLLD 431
Query: 215 RQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF 274
I +G +P LA + E K+DG R QIH +G ++ FSR+
Sbjct: 432 ICKITIGVPCKPMLAKPTKSIQVILERFKDMTFTCEYKYDGLRGQIHYDGKDVTIFSRNL 491
Query: 275 LDHSEYGHAMSKIIEQNV----LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGL 330
+ ++ + + I+++V V ILD E++ +D + N+ F Q++A R +
Sbjct: 492 ENMTQMYPDIVEFIKKHVSQSKTVKNFILDSEIVAFDKNTNKIRPF---QQLATRGRVNV 548
Query: 331 SSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHV 387
D ++C F FD++Y+ D S++ +L+ER + +Q+ V
Sbjct: 549 KLDEIDIKVCVFMFDLIYINDQSLLQTTLQERRQKIQECF-------------------V 589
Query: 388 RPQGEPCWS--LVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKP 443
+ GE C++ + +V+++++F +++++ EG+++K L S +EP RS KWLKLK
Sbjct: 590 QEPGEFCFAEHINTEDVEQIQEFLEKSVKVGCEGLMVKTLETNSTYEPAKRSFKWLKLKK 649
Query: 444 EYIRA--GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLS 501
+Y+ + G LD++ I + G+G+R G +L+A R+ + C++GTG S
Sbjct: 650 DYLDSGLGDTLDLVPIAAFKGTGKRVGLYGAYLLACYNEDM-----ERYETICKIGTGFS 704
Query: 502 DEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSIT-SDIR 560
DE L+A +F+ P+ P S Y +T + K DVW + S++ I +D++
Sbjct: 705 DEILEACYK----FFQDKIIPQ--PQSDY-LTKDFK--ADVWFKP---SVVWEIKGADLQ 752
Query: 561 TIRSEVFSAPYS---------LRFPRIDRVRYDK 585
S V++ S LRFPR+ RVR DK
Sbjct: 753 I--SPVYTCAISETNQEKGIGLRFPRLIRVRDDK 784
>gi|315231717|ref|YP_004072153.1| ATP-dependent DNA ligase [Thermococcus barophilus MP]
gi|315184745|gb|ADT84930.1| ATP-dependent DNA ligase [Thermococcus barophilus MP]
Length = 561
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 132/521 (25%), Positives = 238/521 (45%), Gaps = 80/521 (15%)
Query: 101 NAGNFPMVAAEVLQRRQ--GMISGGLTIKELNDLLDRLASSENRA---EKISVLSTLIKK 155
+ G+ A LQ+R+ LTIK + L ++A + K+ L+ L
Sbjct: 87 DTGDLGESVALALQKRKQRSFFGQPLTIKRVYKTLVKVAETTGEGSQDRKLKYLANLFMD 146
Query: 156 TNAQEMKWIIMIILKDLKLGISE----KSIFHEFH--PD-AEDLFNVTCDLKLVCEKLK- 207
E K++ IL ++ G++E +I F P+ E + +T D V + K
Sbjct: 147 AEPIEGKYLARTILGTMRTGVAEGLLRDAIAEAFRVKPELVERAYMLTSDFGFVTKIAKL 206
Query: 208 DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEI 267
+ N+ + I++GK ++P LA + A ++ G E E K+DG R+Q+HK+G ++
Sbjct: 207 EGNEGLSKVTIQIGKPIKPMLAQMAANVREALVEMGG-EAEFEIKYDGARVQVHKDGDKV 265
Query: 268 HYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLV---------WDTSLNRFAEFGS 318
+SR + ++ + + I++++ ++ I++GE++ + L RF +
Sbjct: 266 IIYSRRLENVTKSIPEVVERIKKSIKPEKAIVEGELVAVGEGGRPRPFQYVLRRFRRKYN 325
Query: 319 NQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLV 378
QE+ + L FDVLYV ++I ER + L+ +V+
Sbjct: 326 IQEMIEKI--------PLELNLFDVLYVDGENLIDTPFIERRKKLESIVE---------- 367
Query: 379 PDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKW 438
+N ++ +L+ + +E E+F+ + ++ EG++ K L S +EPG+R KW
Sbjct: 368 ----VNQWIKV----AENLITKSPEEAEEFYHKALDMGHEGLMAKRLDSVYEPGNRGKKW 419
Query: 439 LKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
LK+KP +LD++IIG +G GRR ++ FL+ A P T F+ +VG+
Sbjct: 420 LKIKPTM----ENLDLVIIGAEWGEGRRAHVLSSFLLG-AYDPGTGT----FVPVGKVGS 470
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
G +DE+L LKP +K + F ++ P V IE + I
Sbjct: 471 GFTDEDLVEFTKMLKPLIKKEK------GKFVEI------EPKVVIEVTYQEI------- 511
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+S + + ++LRFPR +R DK D ++ +L
Sbjct: 512 ---QKSPKYESGFALRFPRYVALREDKSPEDADTLERIAQL 549
>gi|282163283|ref|YP_003355668.1| DNA ligase [Methanocella paludicola SANAE]
gi|282155597|dbj|BAI60685.1| DNA ligase [Methanocella paludicola SANAE]
Length = 574
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 132/510 (25%), Positives = 224/510 (43%), Gaps = 85/510 (16%)
Query: 101 NAGNFPMVAAEVLQRRQGMI---SGGLTIKELNDL---LDRLASSENRAEKISVLSTLIK 154
N G+ + A E+ Q+R+ + + +T++ + D + RL + + +K VL L+
Sbjct: 86 NTGHLGVTAEEMFQKRKQTMFFEADEITVRNVYDTFVEIARLTGAGSATKKQKVLIGLLH 145
Query: 155 KTNAQEMKWIIMI----ILKDLKLGISEKSIFHEFHPDAE----------DLFNVTCDLK 200
+ +E ++I+ + +L K G+ E++I F E DL
Sbjct: 146 RATPKEAEYIVSLAMEYVLSGAKEGVMEEAIARAFGVPVELVRRSNMLISDLGETARVAM 205
Query: 201 LVCEK-LKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQ 259
L E L+ N R R VRP LA + A + G+ E K+DG R+Q
Sbjct: 206 LTGEAGLQAINIRPMR-------PVRPMLAQNVASIQEALDAMGGR-ADFETKYDGARLQ 257
Query: 260 IHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSN 319
+HK G E+ +SR + ++ + + Q+V D ILD E + D R F
Sbjct: 258 VHKLGDEVRLYSRRLENLTDALPEIVDYVRQSVKADSAILDSECIATDPKTGRPVPF--- 314
Query: 320 QEIAKAARDGLSSDRQLCYF-----AFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRL 374
Q I R + + + F FD+LY+ S I + ER ++L+ + P
Sbjct: 315 QNILTRLRRIYNVEEKKKLFPLFLRPFDILYLDGESEIDKPFIERRQILETTILP----- 369
Query: 375 ETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDR 434
L+ + P +L+ +V + FKE++++ +EG++ KDL + + PG R
Sbjct: 370 --------LDETCK----PAMALITDDVKAAQDLFKESLKSGNEGLMAKDLNATYTPGVR 417
Query: 435 SGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFC 494
K +K+K LD+ I+ +G GR+ G + F VA A D +++
Sbjct: 418 GKKMVKIK----EVLDTLDLAIVSSEWGHGRKAGWLTSFEVA-----ALDENTDQYVVLG 468
Query: 495 RVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS 554
RV +G SDE+L + +LKP E+ + +PDV +E + I
Sbjct: 469 RVASGFSDEQLQEMTERLKPLITA-EHGRIV-----------DVKPDVIVEVKFQEI--- 513
Query: 555 ITSDIRTIRSEVFSAPYSLRFPRIDRVRYD 584
+S ++S+ Y+LRFPR+ RVR D
Sbjct: 514 -------QKSPIYSSGYALRFPRLVRVRDD 536
>gi|20091397|ref|NP_617472.1| DNA ligase (ATP) [Methanosarcina acetivorans C2A]
gi|22256752|sp|Q8TMT1.1|DNLI2_METAC RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 2
gi|19916535|gb|AAM05952.1| DNA ligase (ATP) [Methanosarcina acetivorans C2A]
Length = 568
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 209/463 (45%), Gaps = 63/463 (13%)
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSI-------FHEFHPDAEDLFNVTC 197
KI L L + +E K+I + L++L++G+ E + F E F VT
Sbjct: 143 KIKNLQFLFNSSTPREAKYISRLALEELRIGVGEGVVRDAIARAFSVPSDKVEHAFMVTN 202
Query: 198 DLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGD 256
DL +V K+ + + IE+ + ++ L+ D A R + G IE KFDG
Sbjct: 203 DLGIVAAAAKEGGIEALESLGIEINRPIKMMLSQISPDIDADIRDMKG--AAIEWKFDGA 260
Query: 257 RIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEF 316
R+QIHKNG+ + FSR + + + +II ++V + ILDGE + D + +
Sbjct: 261 RVQIHKNGNSVTLFSRKLENVTNSLPDLVEIIRKHVKAESAILDGEAVAVDEN----GKP 316
Query: 317 GSNQEIAKAARDGLSSDRQLCYFA-----FDVLYVGDTSVIHQSLKERHELLQKVVKPSK 371
+ QEI K R + + FD++Y+ ++I L ER + L+ V+ S
Sbjct: 317 RAFQEILKRFRRKYDVEEKALGIPIQLNLFDIMYLNGRTLIDLPLVERRKALESCVESSV 376
Query: 372 GRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEP 431
+++ D ++ +++ VEK ++E + EG+++K+ S + P
Sbjct: 377 EDSKSISVDE--------------QVITGDLELVEKIYREALNAGHEGVMVKNPNSAYSP 422
Query: 432 GDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFI 491
G R WLK KP LD++++G +G GRR + + VA + P+T RF+
Sbjct: 423 GKRGKNWLKKKPLM----ETLDLVVVGAEWGYGRRANLIGSYSVACYD---PET--SRFL 473
Query: 492 SFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSI 551
+VGTGL+DE+L + L E + + RP V +E + I
Sbjct: 474 QVGKVGTGLTDEQLKELTEMLSGLMEGGE-----AGGVFAI------RPKVVLEIAFEEI 522
Query: 552 ILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQ 594
+S + + ++LRFPR R+R DK + +Q
Sbjct: 523 ----------QKSPNYDSGFALRFPRFIRIRDDKDPEEADTIQ 555
>gi|85815841|ref|NP_650187.2| DNA ligase III [Drosophila melanogaster]
gi|84796152|gb|AAF54801.3| DNA ligase III [Drosophila melanogaster]
gi|283135256|gb|ADB11088.1| UT01767p [Drosophila melanogaster]
Length = 806
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 128/504 (25%), Positives = 217/504 (43%), Gaps = 64/504 (12%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
L ++E+ ++L L E+ +L L K +++ I ++ DL++ + I
Sbjct: 143 LYLQEVEEMLLHLVERTKEDEQTDLLQKLCSKATDLDLRTFIRLVKHDLRINARARHILD 202
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRH------------KRQDIEVGKAVRPQLAMR 231
F PDA + + DL + E+ + ++ I+V + P LA
Sbjct: 203 AFGPDAYPAYQSSRDLVAIVEQFATKENKNYASSPVKKTKKTSSSAIQVMTPISPMLASP 262
Query: 232 IGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKII 288
A++K + E K+DG+R+QIHK G++ +FSR+ +DH A+ K I
Sbjct: 263 CKSVEDAFKK-SPTGLYSEIKYDGERVQIHKQGNDFKFFSRNLKPVVDHK--IRALKKYI 319
Query: 289 EQNVL-VDRCILDGEMLVWDTSLNRFAEFGS-----NQEIAKAARDGLSSDRQLCYFAFD 342
Q ILD E+++ DT FGS Q A AA +C F FD
Sbjct: 320 PQAFPGGGEMILDSEIILVDTDTGALLPFGSLGAHKKQTFANAA---------VCLFVFD 370
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
+ + ++R E+L++ ++P K SHV + S
Sbjct: 371 CILYDGEDLTQLPFRKRREILEQNIQPIK-------------SHV----QLSESEFLKTT 413
Query: 403 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI---RAGSDLDVLIIGG 459
E+ + EG+VLK S ++PG R+ WLK+K +Y+ + D++++G
Sbjct: 414 RELAAMTARVLHANLEGVVLKSPTSTYQPGKRN--WLKVKKDYLFDGKMADTADLVVLGA 471
Query: 460 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
+YGSG++GG ++ FL+ D + R + + +V +GL D V L +
Sbjct: 472 WYGSGKKGGTLSIFLMGCY-----DAFGRLWKTVTKVHSGLDDATNAEVHKSLIKLTERA 526
Query: 520 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 579
+ A PS+ + + PDV + P K + IT T ++ S+RFPRI
Sbjct: 527 D--ANAIPSWLLCSKSL--VPDVLAKDPMKMPVWEITGAEFTKSDAHTASGISVRFPRIT 582
Query: 580 RVRYDKPWHDCLDVQSFVELVHSS 603
R R DK + D+ +L +S
Sbjct: 583 RRRSDKSAKEANDLAHLEDLFEAS 606
>gi|430811313|emb|CCJ31236.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 488
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 131/509 (25%), Positives = 234/509 (45%), Gaps = 82/509 (16%)
Query: 124 LTIKELNDLLDRLASS---ENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ + L +A++ +++ +K+ ++ L+ N E K+II + L++ ++EK+
Sbjct: 2 LTVPSVFKSLKEIATTSGKDSQVKKLGIIKKLLSVANGSETKFIIRSLEGKLRIRLAEKT 61
Query: 181 IFHE--------------------FHPDAEDL----FNVTCDLKLVCEKLKDRNQRHKRQ 216
+ + + E++ F+ +V L ++ +
Sbjct: 62 VIMSLAHTMVKIQAEKEGTIVTPSYLTNGENIIREVFSQVPSYDIVISALLKNGIQNLPE 121
Query: 217 DIEV--GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSR 272
+ ++ G ++P LA + + + E K+DG+R QIH NG E+ FSR
Sbjct: 122 NCKLTPGIPLKPMLAKPTKTISEIFDRFENQNFTCEYKYDGERTQIHLIPNG-EVKVFSR 180
Query: 273 SFLD----HSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARD 328
+ + + + + KII+ + +LD E + WD F + D
Sbjct: 181 NLENISNKYPDIVGVIPKIIKDGI--TSFVLDCESVAWDGINKVIQPFQILSTRKRKDVD 238
Query: 329 GLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVR 388
S ++C FAFD+LY+ S+IH+S +ER +LL + KP +G + V + L S
Sbjct: 239 IESIRVKVCIFAFDLLYLNGESLIHKSFRERRDLLIQSFKPLEGEF-SFVQFNDLKS--- 294
Query: 389 PQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEY 445
+++++ F +++I++ EG+++K L S +EP RS WLKLK +Y
Sbjct: 295 -------------LEDIQVFLEKSIQDSCEGLMIKMLDGEESGYEPSKRSRNWLKLKKDY 341
Query: 446 I-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD++++GG+YG G+R +L+ E P Y S C++GTG SDE
Sbjct: 342 MSNIGDSLDLVVLGGFYGRGKRTNTYGAYLLGCYE-PDKGVYE----SICKLGTGFSDEV 396
Query: 505 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE--------SPEKSIILSIT 556
L++ T + K++ S+Y + E+PDVW E + + SI
Sbjct: 397 LESYTTFFNNHILKHK------KSYYHHSAKG-EQPDVWFEPVAVWEVLAADLSISPKYL 449
Query: 557 SDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
+ + + S+ SLRFPR RVR DK
Sbjct: 450 AAVGMVDSD---KGISLRFPRHIRVRDDK 475
>gi|374327751|ref|YP_005085951.1| DNA ligase [Pyrobaculum sp. 1860]
gi|356643020|gb|AET33699.1| DNA ligase [Pyrobaculum sp. 1860]
Length = 563
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 150/567 (26%), Positives = 247/567 (43%), Gaps = 65/567 (11%)
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGG 123
G+ E + L A G+ +A+ ++K G A + + +R G+++ G
Sbjct: 38 GVAEKLCIRALSKASGVPASELEAL----YKKTGDVGEAARRALSTS----KRPGLLAFG 89
Query: 124 ----LTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKDLKLGI 176
L + E+ D+L ++A + KI++LS+L + + +E K+I ++ L+LG+
Sbjct: 90 SQKPLEVSEVYDVLLKVARASGEGAQDLKINLLSSLFARASPEEGKYIARFVVGRLRLGV 149
Query: 177 SEKSIFH----EFHPDAEDL---FNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLA 229
++ +I F + E L ++V DL + + + + + I +G V P LA
Sbjct: 150 ADMTIIEGLSEAFGVEKESLERAYHVYPDLGRLARHVAE-GRPLEEIKITLGVPVLPMLA 208
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE 289
R+ A KL G V E K+DG+R QIH + + + FSR D + + K +
Sbjct: 209 QRLSSASEILAKLGGS-AVCEYKYDGERAQIHLSKAGVKIFSRRLEDITHAYPDVVKAVR 267
Query: 290 QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCY----FAFDVLY 345
+ V IL+GE++ D F QE+ R + Y + FDVLY
Sbjct: 268 EAVSAGEAILEGEIVAVDPDTGDMLPF---QELMHRKRKHEVAAAVEMYPTVLYLFDVLY 324
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
V + + L R L ++VK S D + R +P D V
Sbjct: 325 VDGEDLTEEPLIYRRVKLSEIVKES---------DKVSIAKWRIFDDP---------DSV 366
Query: 406 EKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSG 464
+ FF E++ EG++ K S +E G R W+K K +Y D +D++++G ++G G
Sbjct: 367 DVFFHESVSMGTEGLICKSPTSVYEMGARGWNWIKYKRDYRSEMIDTVDLVVVGAFHGRG 426
Query: 465 RRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 524
+R G FL+A A P+ D F + C+VG+G +D +L + L+P + P R
Sbjct: 427 KRAGLYGAFLLA-AYDPSTDM----FYTVCKVGSGFTDADLKKMYETLQP----LKLPHR 477
Query: 525 APPSFYQVTNNSKERPDVWIESPEKSIILSI--TSDIRTIRSEVFSAPYSLRFPRID-RV 581
P ++ + P V IE I LS T + +R V A +RFPR R
Sbjct: 478 HPRVVSKMEADVWFVPQVVIEVIGAEITLSPLHTCCLGAVRPGVGLA---VRFPRFTGRY 534
Query: 582 RYDKPWHDCLDVQSFVELVHSSNGTTQ 608
R DK V +EL Q
Sbjct: 535 RSDKSPEQATTVAEMLELYKRQKKVAQ 561
>gi|432911802|ref|XP_004078727.1| PREDICTED: DNA ligase 1-like [Oryzias latipes]
Length = 974
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 149/582 (25%), Positives = 248/582 (42%), Gaps = 99/582 (17%)
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMIS-G 122
G+ E+VL + A G D A A G+ +VA ++ M
Sbjct: 425 GVGETVLMKAVAQATGRQLDKIKA----------EAQEKGDLGLVAESSRSNQRMMFQPA 474
Query: 123 GLTIKELNDLLDRLAS-SENRA--EKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEK 179
LT+ + L +AS S N A +KI ++ L E ++I+ + L++G++E+
Sbjct: 475 SLTVGSVFKKLKEIASMSGNSAMNKKIDIIKGLFVACRFSEARYIVRSLAGKLRIGLAEQ 534
Query: 180 SIFHEFH------PDAEDLFNVTCDL---------------------KLVCEK------- 205
S+ P +D D + CE
Sbjct: 535 SVLSALSQAVCLTPPGQDFPPAVIDASKGMSAESRRAWIEEKSLILKQTYCEMPNYDIIL 594
Query: 206 ---LKDR-NQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH 261
LK+ +Q + G +RP LA +K E K+DG+R QIH
Sbjct: 595 PVLLKEGIDQLPNHCKLTPGVPLRPMLAHPTKGVGEVMKKFDEAAFTCEYKYDGERAQIH 654
Query: 262 -KNGSEIHYFSRSFLDH-SEYGHAMSKI--IEQNVLVDRCILDGEMLVWDTSLNRFAEFG 317
E+ FSR+ D+ S+Y +++I +++ +V C+LD E + WD + F
Sbjct: 655 ILESGEVRIFSRNQEDNTSKYPDIIARIPKVKKESVVS-CVLDSEAVAWDHEKKQIQPFQ 713
Query: 318 SNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETL 377
+ D Q+C +AFD+LY+ S++ Q L R LL+
Sbjct: 714 VLTTRKRKDVDASEIKVQVCVYAFDLLYLNGESLVRQPLCRRRALLR------------- 760
Query: 378 VPDHGLNSHVRPQGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGD 433
+S + +GE + S+ + + D + +F ++++ + EG+++K L + +E
Sbjct: 761 ------DSFMEVEGEFMFARSIDSDSTDAIAEFLEQSVRDSCEGLMVKTLEKDATYEIAK 814
Query: 434 RSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFIS 492
RS WLKLK +Y+ G +D+ +IG Y G G+R G FL+A D F S
Sbjct: 815 RSHNWLKLKKDYLDGVGDTVDLCVIGAYLGKGKRTGTYGGFLLACY-----DDENEEFQS 869
Query: 493 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE---- 548
C++GTG DE+L+ LK + PK P ++Y+V +++ PDVW+++ +
Sbjct: 870 VCKIGTGFKDEDLEQHYKFLKEHI----LPK--PRAYYRVDQSAE--PDVWLDAVQVWEV 921
Query: 549 KSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPWHD 589
K LS++ + V SLRFPR R+R DK D
Sbjct: 922 KCADLSLSPVYKAAMGLVDPEKGISLRFPRFLRIRDDKKPED 963
>gi|392571467|gb|EIW64639.1| ATP-dependent DNA ligase [Trametes versicolor FP-101664 SS1]
Length = 692
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 135/515 (26%), Positives = 224/515 (43%), Gaps = 94/515 (18%)
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTC 197
SS+N+ K+S+++ L+ QE K+II + L++G +E+++ A
Sbjct: 197 SSQNK--KVSIITKLMASCQGQEAKYIIRSLEGKLRIGNAERTVLVALAHAAVLAEQEIS 254
Query: 198 DLKLVCEKLKDRNQRHKR-------------------------QDIEV-----GKAVRPQ 227
+ + EKL R + + IEV G ++P
Sbjct: 255 NKRSSAEKLASRLEESASIIKQVYSELPNYDLVIPALLDVGVDRLIEVCKLTPGVPLKPM 314
Query: 228 LAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK--NGSEIHYFSRSFLDHSE-YGHAM 284
LA K GK+ E K+DG+R Q+HK +GS I FSR+ D S+ Y M
Sbjct: 315 LAKPTKAIGEVLDKFEGKKFTCEYKYDGERAQVHKLEDGS-IAVFSRNSEDMSKKYPDLM 373
Query: 285 SKI---IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCY 338
+++ I++ + D E + D + F QE+++ R + + ++C
Sbjct: 374 AQLPSCIKEGT--KTFVFDAEAVAIDKDTGKLMPF---QELSRRKRKDVKVEDIKVRVCL 428
Query: 339 FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLV 398
FAFD+LY+ ++ + R LLQ+ P G + + C
Sbjct: 429 FAFDLLYLNGEPLLQRDFGTRRGLLQEHFLPVDGEFQF------------AKSSDC---- 472
Query: 399 AHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 454
DE++ F +E++++ EG+++K L S ++P R+ WLKLK +Y+ G LD+
Sbjct: 473 -DTTDEIQTFLEESVKDGCEGLMVKMLEGELSHYQPSRRTVNWLKLKKDYLAGVGDSLDL 531
Query: 455 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 514
+++G YYG G+R FL+A D + + C++GTG SDE L A LKP
Sbjct: 532 VVVGAYYGKGKRTNVYGAFLLACY-----DADSEEYQTICKIGTGFSDEALQAHAATLKP 586
Query: 515 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---- 570
P +V +PDVW+E K + +T+D+ S +++A
Sbjct: 587 ------LEMTTPRGDVKVGGA---KPDVWLEP--KVVWEVLTADLSL--SPIYTAAQGLV 633
Query: 571 ----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVH 601
SLRFPR R+R DK D + E+
Sbjct: 634 EERGISLRFPRFIRIREDKAADDATGPEQIAEMYQ 668
>gi|449551128|gb|EMD42092.1| hypothetical protein CERSUDRAFT_110637 [Ceriporiopsis subvermispora
B]
Length = 841
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 164/672 (24%), Positives = 286/672 (42%), Gaps = 112/672 (16%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTY---CDSVDYFSALRLILPSLDRERGSY-GLK 66
L +F+ I+ T +K S F D S L+ + ++R Y G++
Sbjct: 216 ALAKVFSLIEATTKRLEKTSLLTAFFLLVIRRSAPGDTQSLLQAVYLCINRLSPDYVGVE 275
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISG-GLT 125
+ + LI A+G S + AV + +K G+ +VA ++ + LT
Sbjct: 276 LGIGESLLIKAIGESTGRSLAVVKADLKK------EGDLGLVAMNSKNSQKTLFKPKPLT 329
Query: 126 IKELNDLLDRLA-----SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
+ + + L +A SS+N+ K+S+++ L+ E K+II + L++G +E++
Sbjct: 330 LPFVFNNLKEIALSTGHSSQNK--KVSIITKLLAACQESEAKYIIRSLEGKLRIGNAEQT 387
Query: 181 IFHEFHPDAEDLFNVTCDLKLVCEKLKDR------------------------------N 210
+ + + K+ EKL R +
Sbjct: 388 VLVALAHASAIAEQERANKKINKEKLAARLPQASEIIKSVYSELPNYDLVIPALIEVGLD 447
Query: 211 QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIH 268
+ H+ + G ++P LA + K E K+DG+R Q+H ++G+ +
Sbjct: 448 KLHEHCKLTPGVPLKPMLAKPTKAIGEVLDRFENKRFTCEYKYDGERAQVHLVEDGT-VS 506
Query: 269 YFSRSFLDHSE-YGHAMSKI---IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAK 324
FSR+ D S+ Y M++I I++N +LD E + D F QE+++
Sbjct: 507 VFSRNSEDMSKKYPDLMAQIPHCIKENT--KSFVLDAEAVAIDKDTGSLMPF---QELSR 561
Query: 325 AARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDH 381
R + + ++C FAFD+LY+ ++ +SL ER +LL++ +P +
Sbjct: 562 RKRKDVKVEDIQVRVCLFAFDLLYLNGEPLLRKSLAERRQLLREHFQPMHLEFDFAKSSD 621
Query: 382 GLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK---WEPGDRSGKW 438
G +E++ F +E++++ EG+++K L + +EP RS W
Sbjct: 622 G-----------------ETTEEIQTFLEESVKDGCEGLMVKMLDGEPSFYEPSRRSVNW 664
Query: 439 LKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVG 497
LKLK +Y+ G LD++++G YYG G+R FL+A D F + C++G
Sbjct: 665 LKLKKDYLAGVGDSLDLVVVGAYYGKGKRTNVYGAFLLACW-----DADAEEFQTICKIG 719
Query: 498 TGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS 557
TG S+E L L+P E K P ++ +PDVW E K + +T+
Sbjct: 720 TGFSEEVLQKHYESLQP----LEMTK--PRGDIKIGG---AKPDVWFEP--KVVWEVLTA 768
Query: 558 DIRTIRSEVFSAP--------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQK 609
D+ S +++A SLRFPR R+R DK D + E+ K
Sbjct: 769 DLSL--SPIYTAAQGLVDERGISLRFPRFIRIRDDKSAEDGTGPEQIAEMYEKQALAQSK 826
Query: 610 G--KEYGGLQDD 619
G + GG DD
Sbjct: 827 GGKRSKGGDADD 838
>gi|320170916|gb|EFW47815.1| ligase I [Capsaspora owczarzaki ATCC 30864]
Length = 981
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 154/613 (25%), Positives = 261/613 (42%), Gaps = 101/613 (16%)
Query: 64 GLKESVLANCLIDALG--MSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMIS 121
G+ ES+L + DA G M + ADA G+ +VA E ++ M +
Sbjct: 411 GIGESLLMKAIADATGRDMRRIKADA------------EAKGDLGIVAKESRSSQKTMFA 458
Query: 122 -GGLTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNAQEMKWIIMIILKDLKLGIS 177
LT++ + L +AS + +KI + ++ E ++I + L++G++
Sbjct: 459 HKTLTVEAVFKNLREIASMTGHSVMSKKIVKIKAMLVACKESESMFLIRSLAGKLRIGLA 518
Query: 178 EKSIFH-----------EFHPD----------------AEDLFNVTCDLKLVCEKLKDRN 210
E+S+ +P A +L T +K V +L + +
Sbjct: 519 EQSVLAALARAILLTPPRINPAKAQVVDASKSMSEADLAAELERATLAVKTVYCELPNYD 578
Query: 211 ------------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRI 258
+ R + G ++P LA ++ G E K+DG+R
Sbjct: 579 VIIPTLLEVGLEELQVRCTLTPGIPLKPMLAHPTKGVSEVLKRFEGMTFTCEYKYDGERA 638
Query: 259 QIH-KNGSEIHYFSRSFLDH-SEYGHAMSKIIEQ-NVLVDRCILDGEMLVWDTSLNRFAE 315
QIH K ++ +SR+ ++ S+Y + +I + V ILD E + WDT +
Sbjct: 639 QIHMKEDRVVNIYSRNSENNTSKYPDIIERIPKSLKDTVKSYILDCESVAWDTEKKQILP 698
Query: 316 FGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLE 375
F + D Q+C FAFD+LY+ S++ Q LK R ELL++ +G +
Sbjct: 699 FQVLSTRKRKDADVAEIKVQVCLFAFDLLYLNGESLVKQPLKRRRELLREHFAEIEGEIM 758
Query: 376 TLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGD 433
S+ N +++E+F ++I+ EG+++K L + +E
Sbjct: 759 F-----------------ATSMDGTNTEQIEEFLDQSIKAGCEGLMVKTLEQEATYEIAK 801
Query: 434 RSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFIS 492
RS WLKLK +Y+ G LD+++IGGY G G+R G FL+A D + S
Sbjct: 802 RSHNWLKLKKDYLDGVGDTLDLVVIGGYRGKGKRTGFYGGFLLACY-----DEENEEYQS 856
Query: 493 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE---- 548
C++GTG SDE+L T +F+ + P S+Y+ + PD W ++ +
Sbjct: 857 ICKIGTGFSDEDLQRHST----FFKDHVI--SGPKSYYRADDTLA--PDDWFDTVQVWEV 908
Query: 549 KSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTT 607
K+ LSI+ + V SLRFPR R+R DK + ++ S
Sbjct: 909 KAADLSISPVHKAAAGLVDPEKGISLRFPRFLRIRDDKSTEQATNASQVADMYRSQQLLN 968
Query: 608 QKGKEYGGLQDDK 620
Q+GK G +D++
Sbjct: 969 QQGK---GAEDEE 978
>gi|21064069|gb|AAM29264.1| AT15112p [Drosophila melanogaster]
Length = 696
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 217/504 (43%), Gaps = 64/504 (12%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
L ++E+ ++L L E+ +L L K +++ I ++ DL++ + I
Sbjct: 33 LYLQEVEEMLLHLVERTKEDEQTDLLQKLCSKATDLDLRTFIRLVKHDLRINARARHILD 92
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRH------------KRQDIEVGKAVRPQLAMR 231
F PDA + + DL + E+ + ++ I+V + P LA
Sbjct: 93 AFGPDAYPAYQSSRDLVAIVEQFATKENKNYASSPVKKTKKTSSSAIQVMTPISPMLASP 152
Query: 232 IGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKII 288
A++K + E K+DG+R+QIHK G++ +FSR+ +DH A+ K I
Sbjct: 153 CKSVEDAFKK-SPTGLYSEIKYDGERVQIHKQGNDFKFFSRNLKPVVDHK--IRALKKYI 209
Query: 289 EQNVL-VDRCILDGEMLVWDTSLNRFAEFGS-----NQEIAKAARDGLSSDRQLCYFAFD 342
Q ILD E+++ DT FGS Q A AA +C F FD
Sbjct: 210 PQAFPGGGEMILDSEIILVDTDTGALLPFGSLGAHKKQTFANAA---------VCLFVFD 260
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
+ + ++R E+L++ ++P + SHV + S
Sbjct: 261 CILYDGEDLTQLPFRKRREILEQNIQP-------------IKSHV----QLSESEFLKTT 303
Query: 403 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI---RAGSDLDVLIIGG 459
E+ + EG+VLK S ++PG R+ WLK+K +Y+ + D++++G
Sbjct: 304 RELAAMTARVLHANLEGVVLKSPTSTYQPGKRN--WLKVKKDYLFDGKMADTADLVVLGA 361
Query: 460 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
+YGSG++GG ++ FL+ D + R + + +V +GL D V L +
Sbjct: 362 WYGSGKKGGTLSIFLMGCY-----DAFGRLWKTVTKVHSGLDDATNAEVHKSLIKLTERA 416
Query: 520 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 579
+ A PS+ + + PDV + P K + IT T ++ S+RFPRI
Sbjct: 417 D--ANAIPSWLLCSKSL--VPDVLAKDPMKMPVWEITGAEFTKSDAHTASGISVRFPRIT 472
Query: 580 RVRYDKPWHDCLDVQSFVELVHSS 603
R R DK + D+ +L +S
Sbjct: 473 RRRSDKSAKEANDLAHLEDLFEAS 496
>gi|367027026|ref|XP_003662797.1| hypothetical protein MYCTH_2303831 [Myceliophthora thermophila ATCC
42464]
gi|347010066|gb|AEO57552.1| hypothetical protein MYCTH_2303831 [Myceliophthora thermophila ATCC
42464]
Length = 892
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 132/508 (25%), Positives = 214/508 (42%), Gaps = 94/508 (18%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH-----PDAEDLFNVTCDLK 200
K E K+I+ + L+LG++EK++ HE + P DL LK
Sbjct: 395 KGGPSEAKYIVRFLEGKLRLGLAEKTVIVALAQAVVAHEAYQKGTVPSTSDLEKGESILK 454
Query: 201 LVCEKLKD-------------RNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEV 247
V +L N R + + G ++P LA + G+
Sbjct: 455 TVYSELPSYDIIIPAMVKYGIENLREHCK-LRPGVPLKPMLAKPTKAITEVLDRFEGQTF 513
Query: 248 VIECKFDGDRIQIHKNGSEI-HYFSRSFLDHS-EYGHAMSKIIEQN----------VL-- 293
E K+DG+R QIH + S+S + + E G ++ I +N +L
Sbjct: 514 TCEYKYDGERAQIHYVAKDTDEQLSQSAMGATKEVGKGVAAIFSRNSEDLSKKYPDILAK 573
Query: 294 --------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDV 343
+LD E + WD + F Q + + +D D ++ C FAFD+
Sbjct: 574 LPTWVKEDTKSFVLDCESVAWDVKEKKVLPF--QQLMTRKKKDVKVEDVKVTVCVFAFDL 631
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
LY+ +V+ +SL+ER ELLQ+ +P +G +G +D
Sbjct: 632 LYLNGEAVVKKSLRERRELLQQAFQPVEGEFAFATYMNG-----------------QELD 674
Query: 404 EVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGG 459
E++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G
Sbjct: 675 EIQAFLDESVKASCEGLMVKMLDGEESGYEPSKRSRNWLKIKKDYLSGIGDSLDLVVLGA 734
Query: 460 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
YYG G+R FL+A P DTY + C +GTG S+ L+ + L
Sbjct: 735 YYGKGKRTSVYGAFLLACY-NPGTDTYE----TVCNIGTGFSEAVLEELHKSLS------ 783
Query: 520 EYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP----Y 571
E P FY ++ S+ +PDVW E ++ L+++ + E
Sbjct: 784 EIVIDRPKPFYSHSSGSQHQPDVWFEPRYVWEVRTADLTLSPRYKAGMKEGVDPSGEKGI 843
Query: 572 SLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
SLRFPR +VR DK + + E+
Sbjct: 844 SLRFPRFIKVRDDKKPDEATTSRQVAEM 871
>gi|426201422|gb|EKV51345.1| hypothetical protein AGABI2DRAFT_214235 [Agaricus bisporus var.
bisporus H97]
Length = 822
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 158/652 (24%), Positives = 286/652 (43%), Gaps = 114/652 (17%)
Query: 11 VLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSV---DYFSALRLILPSLDRERGSY-GLK 66
L F+ I+ T +K S FL D+ S L+ + ++R Y G++
Sbjct: 200 ALAKTFSLIESTTKRLEKNSYLTSFLLLVIQRSAKGDWNSLLQTVYLCINRLSPDYEGIE 259
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGG-LT 125
+ + LI A+ S + AV + ++ G+ +VA ++ + LT
Sbjct: 260 LGIGESLLIKAIAESTGRSLAVIKADLKR------EGDLGLVAMNSKTSQKTLFKPKPLT 313
Query: 126 IKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF 182
+ + L +A++ ++A+K+S+++ L+ E K+II + L++G +E+S+
Sbjct: 314 LPFVFSHLKDIATTSGHSSQAKKVSIITKLLAACQGLEAKYIIRSLEGKLRIGNAERSVL 373
Query: 183 HEFHPDA----EDLFNVTCDLKLVCEKLKDRNQRHKRQDIEV------------------ 220
++ N + + ++L++ R K E+
Sbjct: 374 VAIANAVVLAEKEASNRNWSNEKLIKRLEESTLRIKSVYSELPNYDKVIPALLDVGIDGL 433
Query: 221 --------GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK--NGSEIHYF 270
G ++P LA + + E K+DG+R Q+HK +GS + F
Sbjct: 434 EEVCKLTPGVPLKPMLAKPTKAIGEVLDRFENQHFTCEYKYDGERAQVHKLEDGS-VAVF 492
Query: 271 SRSFLDHSEYGHAMSKIIEQNVLVDRCI--------LDGEMLVWDTSLNRFAEFGSNQEI 322
SR+ D S+ ++EQ + +CI LD E + D + F QE+
Sbjct: 493 SRNSEDMSK---KYPDLVEQ---LPKCIKETTKSFVLDAEAVAIDRKTGKLMPF---QEL 543
Query: 323 AKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVP 379
++ R + + ++C FAFD+LY+ ++ + L ER +LL + +P G
Sbjct: 544 SRRKRKDVKVEDIQVRVCLFAFDLLYLNGEPLLRKPLSERRKLLLEHFQPIDGEFNFAKA 603
Query: 380 DHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSG 436
+ + +V+E++ F +E++++ EG+++K L S +EP RS
Sbjct: 604 SN-----------------SQSVEEIQAFLEESVKDGCEGLMVKMLDGEPSFYEPSRRSV 646
Query: 437 KWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCR 495
WLKLK +Y+ G LD++++GGYYG G+R FL+A + PD+ + + C+
Sbjct: 647 NWLKLKKDYLAGVGDSLDLVVVGGYYGKGKRTNVYGAFLLACFD---PDS--EEYQTICK 701
Query: 496 VGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI 555
+GTG SDE L + +LKP + E + N +PD+W E K + +
Sbjct: 702 IGTGFSDEILQSHYNELKPL--ELEKARGD-------VNIGGAKPDIWFEP--KIVWEVL 750
Query: 556 TSDIRTIRSEVFSAPY--------SLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
T+D+ S +++A + SLRFPR RVR DK D + E+
Sbjct: 751 TADLSL--SPIYTAAHGTVDERGISLRFPRFIRVRDDKHVEDATASEQVAEM 800
>gi|224487994|sp|A3DP49.2|DNLI_STAMF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
Length = 597
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 137/502 (27%), Positives = 236/502 (47%), Gaps = 63/502 (12%)
Query: 124 LTIKELNDLLDR--LASSE-NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ ++ + L R LA+ E +R K+ +L+ L+ + +E K+II + L+LGI + +
Sbjct: 123 LTVSQVYETLSRVALATGEGSRDIKLKLLAGLLSDASPKEAKYIIRFVEGRLRLGIGDAT 182
Query: 181 IFHEF----------HPDAEDLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQLA 229
I P E +N+ DL + + L + K +VG +RP LA
Sbjct: 183 IMDALAIVYGGGAHARPIVERAYNLRADLGHIAKILATQGLNALKGIKPQVGIPIRPMLA 242
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE 289
R+ + +K+ G V E K+DG+R QIHK G +I +SR + + +
Sbjct: 243 ERLNNPVEILKKVGGIAFV-EYKYDGERAQIHKLGDKIWIYSRRLENITHQYPDVVDYAR 301
Query: 290 QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG----LSSDRQLCYFAFDVLY 345
+ + + I++GE++ +D F QE+ R + + + FD+LY
Sbjct: 302 KYIKANEAIVEGEIVAYDPDTGELRPF---QELMHRKRKHDIHIAIKEVPVKVYLFDLLY 358
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
V + L ER L ++++ + ET + ++R +N DE+
Sbjct: 359 VDGEDYTLKPLPERRAKLVEIIEQT----ETF----QIAEYIR----------TNNPDEL 400
Query: 406 EKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYG 462
EKFF + IE+ EG+++K L + ++ G R W+K K +Y D +D+++IG +YG
Sbjct: 401 EKFFLKAIEDGAEGVMIKALHKNAIYQAGTRGWLWIKYKRDYKSEMIDTVDLVVIGAFYG 460
Query: 463 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
GRRGG+ L+A + P D F S C+VG+G DE++D + LKPY ++++P
Sbjct: 461 RGRRGGKYGALLMA-SYNPDKDV----FESVCKVGSGFKDEDIDKLPEMLKPYIIEHKHP 515
Query: 523 KRAPPSFYQVTNNSKERPDVWIESPEKSIILS---ITSDIRTIRSEVF--SAPYSLRFPR 577
+ ++ +PDVW+ + I+ S + T ++ S+RFPR
Sbjct: 516 RVV----------ARMKPDVWVTPALVAEIIGAELTLSPLHTCCLDIIKPGVGISIRFPR 565
Query: 578 IDRVRYDKPWHDCLDVQSFVEL 599
R R DK D Q +E+
Sbjct: 566 FIRWRPDKGPEDATTSQELLEM 587
>gi|440790289|gb|ELR11572.1| ATPdependent DNA ligase domain containing protein, partial
[Acanthamoeba castellanii str. Neff]
Length = 667
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 181/363 (49%), Gaps = 29/363 (7%)
Query: 250 ECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYG-HAMSKIIEQNVLVDRCILDGEMLVWDT 308
E K+DG+RIQIHK G E +FSR+ E+ A+ I ++ + ILDGE+L+ DT
Sbjct: 164 EIKYDGERIQIHKKGDEYAFFSRNLKKILEWKVAAVRDYITESTEAESIILDGEILLMDT 223
Query: 309 SLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVK 368
++ FGS +A ++ D +C F FD+LYV V+++ LK+R ++L++ V
Sbjct: 224 KTSKPLPFGS---LAIHKKNDFQ-DATVCLFLFDILYVDGKVVMNEPLKKRRQILEESVT 279
Query: 369 PSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK 428
R+E ++ S + E ++ ++ KE +E G+++KD+G
Sbjct: 280 SIPHRIE--FSEYKEISDLTTGEEALTEMM-------DRVLKEGLE----GLMIKDIGDV 326
Query: 429 WEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYP 487
++P R WLKLK +Y+ +D D++++G Y+G+G GG ++ FL+ +
Sbjct: 327 YKPDKRH--WLKLKKDYLAGMADSADLVVLGAYFGTGAYGGMMSVFLMGSYDPDEEKWKA 384
Query: 488 RRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE--YPKRAPPSFYQVTNNSKERPDVWIE 545
R + C+ G G D L + +L+P+ ++ Y K P +++ + PD +
Sbjct: 385 RSRNTVCKAGNGFDDAALKQLQKQLRPHMKQIHKSYDKWNP---HKMPRHRLHVPDFIVT 441
Query: 546 SPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVH-SSN 604
PE++ + + + S+RFPR+ R+R DK + DV L S+
Sbjct: 442 DPEQAPVWEVAG--QGFTDSKHHTTLSIRFPRVTRIRDDKDFSTHTDVVHLRALAQASAE 499
Query: 605 GTT 607
GT+
Sbjct: 500 GTS 502
>gi|409730230|ref|ZP_11271816.1| DNA ligase (ATP) [Halococcus hamelinensis 100A6]
gi|448723593|ref|ZP_21706110.1| DNA ligase (ATP) [Halococcus hamelinensis 100A6]
gi|445787429|gb|EMA38173.1| DNA ligase (ATP) [Halococcus hamelinensis 100A6]
Length = 556
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 138/541 (25%), Positives = 244/541 (45%), Gaps = 81/541 (14%)
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRR--QGMIS 121
G+ S+ L DA G+ DA R+ +WR+ G+ AA+ ++ R + S
Sbjct: 58 GVSSSLTVRALSDATGV-----DADRIGDWRR-----ETGDLGDAAAKAVENRVQTTLFS 107
Query: 122 GGLTIKELNDLLDRLASSENRAEKISV---LSTLIKKTNAQEMKWIIMIILKDLKLGISE 178
G L+++ + D L LA+ E + ++ L+ ++ E ++++ I+ ++LG+ E
Sbjct: 108 GSLSVRRVYDTLRGLATYEGPGSQTRATDDIADLLGDASSDEARYVVRTIVGTMRLGVGE 167
Query: 179 KSI----FHEFHPDAEDL-------FNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQ 227
+I F DA+D + VT D ++V E +DR R ++E + RP
Sbjct: 168 GTIRDALARAFLDDADDAVRAVERAYEVTNDFRVVGETARDRG-REGLDELE-AELFRPV 225
Query: 228 LAMRIGDAHAAWRKLHGKE-VVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSK 286
AM A L E ++E K+DG R++IH +G EI F+R D +E + +
Sbjct: 226 KAMLARKAEGLEDALESIERPLLEYKYDGMRVKIHVDGDEIRVFTRRLEDVTEQFPDVVE 285
Query: 287 IIEQNVLVDRCILDGEMLVWDTSLNR---FAEFGSNQEIAKAARDGLSSDRQLCYFAFDV 343
+ V + +++ E++ +D R F EF S + K D L++ + AFD+
Sbjct: 286 AVRDEVTAETAVVEAEVVGYDPETGRPIPFQEF-SKRIKRKTDIDELAAAHPVTVHAFDL 344
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
LY D ++ +L +R L+ V+ P ET+V HVR ++
Sbjct: 345 LYHDDDPLVEAALSDRLSRLEAVIDPGS---ETVV----RAEHVRTDA----------LE 387
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGS 463
E+F+ + ++ EG+++K+L + ++PG R G LK+KP LD++++ + +
Sbjct: 388 TAEEFYGDALDAGQEGLMVKNLDAGYQPGSRVGYMLKVKPTM----EPLDLVVVQAKWSA 443
Query: 464 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
GR+ + + +A D R+ +GL+D EL + KL+P E
Sbjct: 444 GRKSEWLGRLRLACW-----DADCEELREVGRMFSGLTDAELREITEKLEPLIESVE--- 495
Query: 524 RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 583
+K RP+V +E ++I S D + Y+LRFPR R
Sbjct: 496 ---------GRTAKLRPEVVVEVEYEAIQESTKYD----------SGYALRFPRFGGFRD 536
Query: 584 D 584
D
Sbjct: 537 D 537
>gi|340516366|gb|EGR46615.1| DNA ligase [Trichoderma reesei QM6a]
Length = 877
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 133/519 (25%), Positives = 222/519 (42%), Gaps = 98/519 (18%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH-----PDAEDLFNVTCDLK 200
K E K+II + L+LG++++++ HE P DL N LK
Sbjct: 380 KGGPSEAKYIIRFLEGKLRLGLADRTVLVSLAQAVVAHEAEQKGKIPSTTDLENGESILK 439
Query: 201 LVCEKLKDRN------------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVV 248
V +L + + + G ++P LA + G+
Sbjct: 440 TVYSELPSYDVIIPAMLKYGIFNLREHCKLRPGVPLKPMLAKPTKAITEVLDRFEGQTFT 499
Query: 249 IECKFDGDRIQIH---KNGSE-----------------IHYFSRSFLDHSE-YGHAMSKI 287
E K+DG+R QIH K+ SE FSR+ D S+ Y + K+
Sbjct: 500 CEYKYDGERAQIHYVAKDASEDLSAPAAGVAKPAASGVSCIFSRNSEDLSKKYPDILEKL 559
Query: 288 ---IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD--RQLCYFAFD 342
++++ +LD E + WD + + F Q + + +D + D ++C FAFD
Sbjct: 560 HTWVKEDT--KSFVLDCETVAWDVTEKKVLPF--QQLMTRKRKDVKAEDIKVKVCVFAFD 615
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
+LY +V+ +SL+ER ELL P +G +H+ Q +
Sbjct: 616 LLYFNGEAVVEKSLRERRELLHTAFTPVEGEF-------AFATHMNGQ----------EL 658
Query: 403 DEVEKFFKETIENRDEGIVLKDLGSK---WEPGDRSGKWLKLKPEYIRA-GSDLDVLIIG 458
DE++ F E+++ EG+++K L K +EP RS WLK+K +Y+ G LD+++IG
Sbjct: 659 DEIQSFLDESVKASCEGLMVKMLDGKESGYEPSKRSRNWLKIKKDYLSGVGDSLDLVVIG 718
Query: 459 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 518
YYG G+R FL+A + DTY + C +GTG S++ L+ + +L
Sbjct: 719 AYYGKGKRTSVYGAFLLACY-NASTDTYE----TVCNIGTGFSEQVLEDLYAQLS----- 768
Query: 519 YEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSAP--- 570
+ P FY ++ + +PDVW E P+ K+ L+++ + E
Sbjct: 769 -QITISRPKPFYSHSSGGQHQPDVWFE-PKYVWEVKTADLTLSPRYKAGWKEGVDPAGEK 826
Query: 571 -YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 608
SLRFPR ++R DK + + E+ T+
Sbjct: 827 GISLRFPRFIKIRDDKKPDEATSSRQVAEMYRKQESVTK 865
>gi|126466208|ref|YP_001041317.1| ATP-dependent DNA ligase [Staphylothermus marinus F1]
gi|91177882|gb|ABE27150.1| ATP-dependent DNA ligase [Staphylothermus marinus]
gi|126015031|gb|ABN70409.1| DNA ligase I, ATP-dependent Dnl1 [Staphylothermus marinus F1]
Length = 611
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 137/502 (27%), Positives = 236/502 (47%), Gaps = 63/502 (12%)
Query: 124 LTIKELNDLLDR--LASSE-NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ ++ + L R LA+ E +R K+ +L+ L+ + +E K+II + L+LGI + +
Sbjct: 137 LTVSQVYETLSRVALATGEGSRDIKLKLLAGLLSDASPKEAKYIIRFVEGRLRLGIGDAT 196
Query: 181 IFHEF----------HPDAEDLFNVTCDLKLVCEKLKDRNQRH-KRQDIEVGKAVRPQLA 229
I P E +N+ DL + + L + K +VG +RP LA
Sbjct: 197 IMDALAIVYGGGAHARPIVERAYNLRADLGHIAKILATQGLNALKGIKPQVGIPIRPMLA 256
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE 289
R+ + +K+ G V E K+DG+R QIHK G +I +SR + + +
Sbjct: 257 ERLNNPVEILKKVGGIAFV-EYKYDGERAQIHKLGDKIWIYSRRLENITHQYPDVVDYAR 315
Query: 290 QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG----LSSDRQLCYFAFDVLY 345
+ + + I++GE++ +D F QE+ R + + + FD+LY
Sbjct: 316 KYIKANEAIVEGEIVAYDPDTGELRPF---QELMHRKRKHDIHIAIKEVPVKVYLFDLLY 372
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
V + L ER L ++++ + ET + ++R +N DE+
Sbjct: 373 VDGEDYTLKPLPERRAKLVEIIEQT----ETF----QIAEYIR----------TNNPDEL 414
Query: 406 EKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYG 462
EKFF + IE+ EG+++K L + ++ G R W+K K +Y D +D+++IG +YG
Sbjct: 415 EKFFLKAIEDGAEGVMIKALHKNAIYQAGTRGWLWIKYKRDYKSEMIDTVDLVVIGAFYG 474
Query: 463 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
GRRGG+ L+A + P D F S C+VG+G DE++D + LKPY ++++P
Sbjct: 475 RGRRGGKYGALLMA-SYNPDKDV----FESVCKVGSGFKDEDIDKLPEMLKPYIIEHKHP 529
Query: 523 KRAPPSFYQVTNNSKERPDVWIESPEKSIILS---ITSDIRTIRSEVF--SAPYSLRFPR 577
+ ++ +PDVW+ + I+ S + T ++ S+RFPR
Sbjct: 530 RVV----------ARMKPDVWVTPALVAEIIGAELTLSPLHTCCLDIIKPGVGISIRFPR 579
Query: 578 IDRVRYDKPWHDCLDVQSFVEL 599
R R DK D Q +E+
Sbjct: 580 FIRWRPDKGPEDATTSQELLEM 601
>gi|322801939|gb|EFZ22486.1| hypothetical protein SINV_00170 [Solenopsis invicta]
Length = 759
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 186/413 (45%), Gaps = 47/413 (11%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-KNGSEIHYFSRSFLDHSE 279
G ++P LA + G + E K+DG+R QIH + +++ +SR+ +++
Sbjct: 378 GIPLKPMLAHPTKGVQEVLTRFEGLKFTCEWKYDGERAQIHVADNGQVNIYSRNQENNTS 437
Query: 280 YGHAMSKIIEQNV--LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR--- 334
+ K + LV CILD E + WD N+ F Q ++ R + +
Sbjct: 438 KYPDIIKRFKNTCGDLVKNCILDCEAVAWDREKNQILPF---QILSTRKRKDANEEDIKV 494
Query: 335 QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPC 394
Q+C F FD+LY+ D ++ + +R ELL++ K +G +
Sbjct: 495 QVCVFMFDLLYLNDEPLVKEPFIKRRELLKQHFKEVEGEWKFAT---------------- 538
Query: 395 WSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSD 451
SL ++EVE F E+++ EG+++K L + +E RS WLKLK +Y+ G
Sbjct: 539 -SLDTTTMEEVEVFLDESVKGNCEGLMVKTLEKDATYEIAKRSRNWLKLKKDYLDGVGDT 597
Query: 452 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 511
LDV++IGGY G G+R G FL+A D + S C++GTG +++L+
Sbjct: 598 LDVVVIGGYIGKGKRTGTYGGFLLACY-----DQENEEYQSICKIGTGFKEDDLETHTK- 651
Query: 512 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVF 567
+F+ + P+ S+Y+ +S PD W E + K LS++ R V
Sbjct: 652 ---FFKDHVIPQAK--SYYRF--DSSHEPDHWFEPIQVWEIKCADLSLSPVHRAAIGIVD 704
Query: 568 SAP-YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
SLRFPR R+R DK Q ++ ++ K ++D
Sbjct: 705 PEKGISLRFPRFIRIREDKTCEQANSAQDVADMYNNQEQIKNKTSALKATEED 757
>gi|406907770|gb|EKD48493.1| hypothetical protein ACD_64C00280G0001 [uncultured bacterium]
Length = 465
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 138/499 (27%), Positives = 222/499 (44%), Gaps = 75/499 (15%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
L+++ + ++ EK L L+ + + K+++ I+L L+LG S+ ++
Sbjct: 3 LEKIEGTGSQEEKAGKLFELLAQLDPISAKYVVRIVLGKLRLGFSDMTVIDALSWMEVGD 62
Query: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ-DIEVGKAVRPQLAMRIGDAHAAWRK 241
E +N++ D L+ + LK+ + Q I +G +RP A R+ A K
Sbjct: 63 KSLRAKIEHAYNISVDSGLIAKTLKEGGIKAIEQMHITIGIPIRPAAAERLPTAKDIVDK 122
Query: 242 LHGKEVVIECKFDGDRIQIH--KNGS--EIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRC 297
L GK V + K DG R+QIH K G +I +FSR+ D S+ + IE V V
Sbjct: 123 L-GK-CVAQPKLDGFRLQIHLDKTGPRPKIRFFSRNLKDMSDMFPDLVAPIEA-VDVQTL 179
Query: 298 ILDGEMLVWDTSLNRFAEFGSNQEIAKAAR----DGLSSDRQLCYFAFDVLYVGDTSVIH 353
I +GE + +D + + F F QE K R + +++ L F FD+LY+ ++
Sbjct: 180 ICEGEAIGYDANTDTFLPF---QETVKRKRKHGIEQAATEFPLKLFLFDLLYLNGEPLLD 236
Query: 354 QSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETI 413
++R+ LL+K+VK + + + + + ++E++F E I
Sbjct: 237 MPHEQRYHLLKKLVKHDQNNPLQFIAEKEITT----------------AKQLEEYFYEMI 280
Query: 414 ENRDEGIVLKDLGSKWEPGDRSGKWLKLK-PEYIRAGSDLDVLIIGGYYGSGRRGG-EVA 471
E EG+V+K + + ++PG R+ W+KLK E +D I+G YYG+G+R +
Sbjct: 281 EEGLEGVVVKRMNAIYQPGKRNFNWIKLKRQEEGELEDTIDCAILGYYYGAGKRATFGIG 340
Query: 472 QFLVALAERPAPDTYPRRFISFCRVGTGLSD-------EELDAVVTKLKPYFRKYEYPKR 524
FLV + + RF + +VGTGLSD +LDA KP
Sbjct: 341 AFLVGVFNKGH-----DRFETVAKVGTGLSDVAWKELRTKLDAAAVTHKP---------- 385
Query: 525 APPSFYQVTNNSKERPDVWIESPEKSIIL---SIT-SDIRTIRSEVFSAPYSLRFPRIDR 580
V + PDVW +PE I+ IT S T Y+LRFPR
Sbjct: 386 -----VNVECAKELYPDVWT-APEIVCIIRADEITKSPTHTAGKTAHELGYALRFPRFMG 439
Query: 581 VRYDKPWHDCLDVQSFVEL 599
R DK D V E+
Sbjct: 440 YREDKSPEDATTVFELKEM 458
>gi|386002175|ref|YP_005920474.1| DNA ligase [Methanosaeta harundinacea 6Ac]
gi|357210231|gb|AET64851.1| DNA ligase [Methanosaeta harundinacea 6Ac]
Length = 560
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 143/530 (26%), Positives = 233/530 (43%), Gaps = 96/530 (18%)
Query: 97 GAAPN--------AGNFPMVAAEVLQR-RQGMISG-----GLTIKELND---LLDRLASS 139
GAAP+ G+ VAAE+ ++ R +S LTI E++ L+ R +
Sbjct: 75 GAAPSEVQELLRRTGDVGAVAAELAKKGRSSTLSTFLEGERLTILEVHSRFLLIARASGR 134
Query: 140 ENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEK----SIFHEFHPDAEDL--- 192
++ K+ L L + A E +++ + L+D+++G+ E ++ F E++
Sbjct: 135 RSQTAKMKHLRYLFSEAGATEARYMARLALEDMRIGVGEGIVRDAVAKAFGISPEEVERG 194
Query: 193 FNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECK 252
+N T DL LV + K+ R + IE+G+ ++ LA ++G A G +E K
Sbjct: 195 YNFTSDLGLVARQAKE--GRLQELTIEIGRPIKMMLA-QLGSGIAGSVAEMGT-AAVEVK 250
Query: 253 FDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNR 312
+DG R+QIHK G E+ FSR + + +++ V + ILDGE + R
Sbjct: 251 YDGSRVQIHKRGEEVEIFSRRLERVTRSLPEIVSFVKEGVRAEAAILDGEAVARGED-GR 309
Query: 313 FAEFGSNQEIAKAAR-----DGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVV 367
F QEI K R +G + L FD++Y+ +I + L+ER LL+ V
Sbjct: 310 PLPF---QEILKRFRRKYRVEGAAKRIPLELMLFDLIYLNGRVLIDEPLRERRRLLESVA 366
Query: 368 KPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGS 427
D + + + +P +EV ++E I EG++LK S
Sbjct: 367 ------------DEKILAGQKVTDDP---------EEVAGIYEEAIAEGHEGVMLKSPES 405
Query: 428 KWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYP 487
+ PG R WLK+KP LD+++IG +G GRR + +A +PD
Sbjct: 406 PYAPGKRGKNWLKIKPVM----ETLDLVVIGARWGEGRRATFFGSYRLA-----SPDPET 456
Query: 488 RRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKE---RPDVWI 544
R V TG++DE ++ +L FR V E +P+V
Sbjct: 457 GRLEDVGWVATGITDE----MLAELTELFR----------DLVLVAGEGMEVEVKPEVVF 502
Query: 545 ESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWH--DCLD 592
E + I +S+ +S+ Y+LRFPR+ R+R DK D LD
Sbjct: 503 EVAFEEIQ----------KSKSYSSGYALRFPRLVRIRDDKAVEEADTLD 542
>gi|402582195|gb|EJW76141.1| hypothetical protein WUBG_12948, partial [Wuchereria bancrofti]
Length = 322
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 178/348 (51%), Gaps = 36/348 (10%)
Query: 129 LNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPD 188
++D L++L+ E+ S + K + E+K+II +I+KDL++ K I
Sbjct: 1 VDDWLEKLSELTREKEQQMHFSKICKLVSCLELKYIIRLIMKDLRISAGAKHILEGVKKG 60
Query: 189 AEDLFNVTCDLKLVCEKLKDRNQRHKRQD-IEVGKAVRPQLAMRIGDAHAAWRKLHGKEV 247
A ++F + +L+ V EK + ++ + I + ++P LA A K + KE+
Sbjct: 61 AYEMFQNSRNLQAVIEKCQCTDKEKLLESGIVLNTPIKPMLAEPCRSVKQAMEKCN-KEM 119
Query: 248 VIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDR-CILDGEM 303
E K+DG+R+Q+HK+GS+ +FSRS LDH ++K+I + R I+D EM
Sbjct: 120 FAEIKYDGERLQLHKDGSKFMFFSRSLKPTLDHKVID--LNKVISEAFPTSRDLIVDAEM 177
Query: 304 LVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELL 363
L+ DT+ + FG+ + D +C F FD +Y S++ + L+ER + L
Sbjct: 178 LLIDTNTGKPLPFGT----LGIHKKKQFKDAAVCLFVFDCIYYDSKSLMEKPLRERRKFL 233
Query: 364 QKVVKPSKGRLETLVPDHGL--NSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIV 421
+ +K +P+ L N H+ +GE ++E +TI+ EG+V
Sbjct: 234 EDNMKE--------IPNRVLLSNCHLIKKGEN---------HKLEMLVLKTIDEGLEGLV 276
Query: 422 LKDLGSKWEPGDRSGKWLKLKPEYIRAG---SDLDVLIIGGYYGSGRR 466
LKDL S +EPG R WLK+K +Y++ G D++++G +YG+G +
Sbjct: 277 LKDLDSIYEPGKRH--WLKVKKDYLQGGDMADTADLILLGAFYGTGNK 322
>gi|198427151|ref|XP_002124805.1| PREDICTED: similar to ligase I [Ciona intestinalis]
Length = 1060
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 138/565 (24%), Positives = 246/565 (43%), Gaps = 106/565 (18%)
Query: 101 NAGNFPMVAAEVLQRRQGMIS-GGLTIKELNDLLDRLAS---SENRAEKISVLSTLIKKT 156
N G+ +VA ++ M + LT+ + L ++A+ + ++K+S++ +L+
Sbjct: 517 NTGDLGLVAENSRSNQKMMFTPAALTVDGVFKKLKQIAAISGGSSMSQKVSLVKSLLVAC 576
Query: 157 NAQEMKWIIMIILKDLKLGISEKSIF-------------HEFHP---------DAE---- 190
E ++++ + L++G++E+S+ +F P AE
Sbjct: 577 KHCEARYLMRSLGGKLRIGLAEQSVLVAIANAAYLTPPGQDFPPAIINAGEKIPAETLKS 636
Query: 191 --------------DLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAH 236
+L N +K + E D+ H R + G ++P LA
Sbjct: 637 KMDEKALIVKTTYSELPNYDIVIKTMLEHGVDKLPDHCR--LTPGIPLKPMLAHPTKGVS 694
Query: 237 AAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDH-SEYGHAMSKIIEQ-NVL 293
+ + E E K+DG+R QIH G E+ +SR+ ++ S+Y +S++
Sbjct: 695 EVFNRFDKSEFTCEYKYDGERAQIHLLEGGEVRIYSRNQENNTSKYPDIISRVPAMLKDE 754
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIH 353
V C++D E + WDT + F + D + Q+C +AFD+LY+ S++
Sbjct: 755 VTSCVIDSEAVAWDTDKKQILPFQVLSTRKRKDADLSTIKVQVCIYAFDLLYLNGESLVR 814
Query: 354 QSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETI 413
+S +ER +LL G+ S + D++ +F +E+I
Sbjct: 815 KSFRERRKLLLDNFNVCDGQFVF-----------------AESQDTTDTDKIAEFLEESI 857
Query: 414 ENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEV 470
+ EG+++K L + +E RS WLKLK +Y+ G LD+++IGGY G G+R G
Sbjct: 858 KGNCEGLMVKTLDDDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGGYKGKGKRVGNY 917
Query: 471 AQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL-DAVVTKLKPYFRKYEYPKRAPPSF 529
FL+A D + + C++GTG SD+ L D + +F ++ + P S+
Sbjct: 918 GGFLLACY-----DEESEEYQTICKIGTGFSDQNLADHAI-----FFNQHLIDQ--PKSY 965
Query: 530 YQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSAP---------YSLRFP 576
Y++ + D W E + K+ LS+ S V++A SLRFP
Sbjct: 966 YRLNGSDA---DQWFEPVQVWEVKAADLSV--------SPVYAAANGIIDPERGISLRFP 1014
Query: 577 RIDRVRYDKPWHDCLDVQSFVELVH 601
R R+R DK + + Q +L H
Sbjct: 1015 RFIRIRDDKKPEEATNSQQVADLYH 1039
>gi|195109244|ref|XP_001999197.1| GI24375 [Drosophila mojavensis]
gi|193915791|gb|EDW14658.1| GI24375 [Drosophila mojavensis]
Length = 793
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 128/509 (25%), Positives = 221/509 (43%), Gaps = 72/509 (14%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
L + E+ +L +L E+ VL L K+ +++ I +I +DL++ + I
Sbjct: 123 LYLHEVEKMLCQLEQRTKEDEQTEVLQKLCKQATDLDLRTFIRLIKQDLRINARARHILD 182
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKR--------------QDIEVGKAVRPQLA 229
F P A + + DL + + + + I+V + P LA
Sbjct: 183 AFGPQAYPAYQSSRDLAAIVQNFAGKEGTSLKTPIKATAKKAKKDTSAIQVMTPISPMLA 242
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSK 286
A++K G + E K+DG+R+QIHK G+E +FSR+ +DH K
Sbjct: 243 NACKSVEEAFKKNPGG-LYSEIKYDGERVQIHKKGAEFKFFSRNLKPVMDH--------K 293
Query: 287 IIEQNVLVDRC-------ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYF 339
I + + R ILD E+++ DT FG+ A + ++ +C F
Sbjct: 294 IKDLKDYIPRAFPGAGDMILDSEIILVDTETGALLPFGT----LGAHKKHTYANASICLF 349
Query: 340 AFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVA 399
FD L + + +R E+L++ ++P K SHV + S
Sbjct: 350 VFDCLLYDGDDLTQLAFCKRREILEQNIQPIK-------------SHV----QLSESEFL 392
Query: 400 HNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLI 456
+E+ + ++ EG+VLK S ++PG R+ WLK+K +Y+ G D+++
Sbjct: 393 KTKNELALMTAKVLQANLEGVVLKSPSSTYQPGKRN--WLKVKKDYLFGGKMADTADLVV 450
Query: 457 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 516
+G +YGSG++GG ++ FL+ D + + +V +GL D D + +L
Sbjct: 451 LGAWYGSGKKGGVLSIFLMGCY-----DARDHLWKTVTKVHSGLDDATNDEIHEEL---- 501
Query: 517 RKYEYPKRAPPSFYQVTNNSKER--PDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLR 574
+ KRA + + K+ PDV ++PEK + IT T + S+R
Sbjct: 502 --MKLTKRADANNIPNWLHCKKALIPDVLAKTPEKMPVWEITGAEFTQSEAHTAGGISIR 559
Query: 575 FPRIDRVRYDKPWHDCLDVQSFVELVHSS 603
FPRI R+R DK + D+ +L +S
Sbjct: 560 FPRITRLRSDKCAKEANDLAHLEQLYAAS 588
>gi|440803704|gb|ELR24587.1| ligase I, DNA, ATPdependent, putative [Acanthamoeba castellanii
str. Neff]
Length = 753
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 144/606 (23%), Positives = 256/606 (42%), Gaps = 101/606 (16%)
Query: 49 LRLILPSLDRERGSY-GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPM 107
L + ++++ SY GL+ V + LI A+ + D+V + K G+ +
Sbjct: 175 LACVYLTINKIAPSYEGLELGVGESILIKAVASATGKKDSVIKAEYEK------LGDLGL 228
Query: 108 VAAEVLQRRQGMISGG-LTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNAQEMKW 163
VAA ++ M LT+ + + L+++A + RA +K ++ L+ E +W
Sbjct: 229 VAAAARNTQKTMFPPPPLTVSFVFNTLNQIAKAAGRASQDKKKGLIQQLLVGAREGEAQW 288
Query: 164 IIMIILKDLKLGISEKSI----FHEFHPDAEDL------FNVTCDLKLVCEKLKDRNQRH 213
+I + L++G++EK++ H DL + +++ E LK+
Sbjct: 289 LIRSLEGKLRIGLAEKTVQVALAHAIVLTRTDLQDKRARLGLEERMRVAAETLKEVFNEL 348
Query: 214 KRQDIEV-------------------GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFD 254
+I + G V P LA ++ E K+D
Sbjct: 349 PNYNILIPVILKEEPEKWSESCHLTPGIPVHPMLAHPTKGIDEVLQRCADAAFTCEWKYD 408
Query: 255 GDRIQIH-KNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVD--RCILDGEMLVWDTSLN 311
G+R Q+H + +H +SR+ D++ + + + + + D ILD E++ +D
Sbjct: 409 GERAQVHFTDDGGVHVYSRNLEDNTTKYPDIKQNLPKAMKPDTHSFILDCEVVAYDREKK 468
Query: 312 RFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSK 371
+ F A+ D Q+C F FD+LY S++ + ++R ELL
Sbjct: 469 QILPFQVLSTRARKDADMSEIKVQICLFGFDLLYFNGQSLVREPFRKRRELLH------- 521
Query: 372 GRLETLVPDHGLNSHVRPQGEPCWSLV--AHNVDEVEKFFKETIENRDEGIVLK--DLGS 427
N+ V E ++ A+ DE+ E++ EG+++K D +
Sbjct: 522 ------------NAFVEVDDEFKFARYSDANTTDEIANSLHESVAGNCEGLMIKRLDEDA 569
Query: 428 KWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTY 486
++P RS WLK+K +Y+ +D +D++ IG YYG G+R G FL+A D
Sbjct: 570 TYQPSKRSYSWLKVKKDYLTGMTDSVDLVPIGAYYGKGKRTGVYGAFLLACY-----DPN 624
Query: 487 PRRFISFCRVGTGLSDEEL--------DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKE 538
F + C++GTG SDE+L D +++K +PY+R + +
Sbjct: 625 AEEFQNVCKIGTGFSDEDLEKFAEFFKDKIISKPRPYYR----------------YSDQV 668
Query: 539 RPDVWIESP----EKSIILSITSDIRTIRSEVF-SAPYSLRFPRIDRVRYDKPWHDCLDV 593
PDVW ++ K+ LS++ + V S SLRFPR R R DK D +
Sbjct: 669 EPDVWFDASVVWEVKAADLSLSPHYKAALGLVSESKGISLRFPRYLRTRDDKKPEDATNG 728
Query: 594 QSFVEL 599
+ E+
Sbjct: 729 EQIAEM 734
>gi|340711651|ref|XP_003394386.1| PREDICTED: DNA ligase 1-like [Bombus terrestris]
Length = 925
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 187/402 (46%), Gaps = 53/402 (13%)
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-KNGSEIHYFSRSFLD 276
I G ++P LA + G + E K+DG+R QIH +I+ +SR+ +
Sbjct: 541 ITPGIPMKPMLAHPTKGVQEVLTRFDGLKFTCEWKYDGERAQIHLAEDGKINIYSRNQEN 600
Query: 277 H-SEYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR-DGLSSD 333
+ S+Y + ++ Q V CILD E + WD + F Q ++ R D +D
Sbjct: 601 NTSKYPDIIGRLKNTQGEEVKSCILDCEAVAWDNENKQILPF---QILSTRKRKDANEAD 657
Query: 334 --RQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
Q+C F FD+LY+ ++ Q +R ELL+K K G +
Sbjct: 658 IKVQVCVFMFDLLYLNGEPLVQQPFIKRRELLKKNFKEVIGEWKFAT------------- 704
Query: 392 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA- 448
SL +++V+ F E+++ EG+++K L + +E RS WLKLK +Y+
Sbjct: 705 ----SLDTSTMEQVQDFLDESVKGNCEGLMVKTLEQDATYEIAKRSRNWLKLKKDYLEGV 760
Query: 449 GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAV 508
G LDV++IGGY G G+R G FL+A D + S C++GTG S+E+L
Sbjct: 761 GDTLDVVVIGGYIGKGKRTGTYGGFLLACY-----DQENEEYQSVCKIGTGFSEEDLQ-- 813
Query: 509 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT----SDIR 560
K +F+++ P+ S+Y+ +S PD W E + K LS++ + +
Sbjct: 814 --KHTEFFKEHIIPQTK--SYYRY--DSSLEPDHWFEPVQVWEIKCADLSLSPVHKAAVG 867
Query: 561 TIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
I E SLRFPR R+R DK D Q ++ +S
Sbjct: 868 IIDPE---KGISLRFPRFVRIRDDKNNEDATSAQQIADMYNS 906
>gi|321477879|gb|EFX88837.1| hypothetical protein DAPPUDRAFT_304798 [Daphnia pulex]
Length = 677
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 185/414 (44%), Gaps = 67/414 (16%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDH- 277
G ++P LA +K + E K+DG+R QIH +NG EI +SR+ ++
Sbjct: 296 GVPLKPMLACPTRGVGEVLQKFESTKFTCEWKYDGERAQIHLLENG-EIRIYSRNQENNT 354
Query: 278 SEYGHAMSKI---IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR-DGLSSD 333
S+Y +S+ IE + V ILD E + WDT + F Q ++ R D + +D
Sbjct: 355 SKYPDIISRFQSWIEPSASVRSAILDTEAVAWDTDKKQILPF---QILSTRKRKDAVEAD 411
Query: 334 --RQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
Q+C +AFD+LY+ S++ L ER + L G+ G + PQ
Sbjct: 412 IKVQVCVYAFDLLYLNGESLVTMPLIERRQRLWNSFHKVDGQF-------GFATSRDPQ- 463
Query: 392 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA- 448
V+E+E+F E+++ EG+++K L + +E RS WLKLK +Y+
Sbjct: 464 ---------TVEEIEEFLDESLKGNCEGLMVKGLVKDATYEIAKRSKNWLKLKKDYLDGI 514
Query: 449 GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA- 507
G +D ++IGGY G G+R G FL+A D + S C++GTG SDE+ A
Sbjct: 515 GDTIDAVVIGGYLGRGKRTGLYGGFLLACY-----DEANEEYQSLCKIGTGFSDEDFQAH 569
Query: 508 -------VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
+ K KPYF R PS PD W E + K LSI+
Sbjct: 570 SDFLKNHKIPKPKPYF-------RFDPSL---------SPDDWFEPVQVWEIKCADLSIS 613
Query: 557 SDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQK 609
R V SLRFPR R+R DK + + +L +S K
Sbjct: 614 PVHRAATGIVDPVKGISLRFPRFIRIRPDKNPENATSSEQIADLYNSQEQVKNK 667
>gi|195053390|ref|XP_001993609.1| GH20153 [Drosophila grimshawi]
gi|193895479|gb|EDV94345.1| GH20153 [Drosophila grimshawi]
Length = 799
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 218/504 (43%), Gaps = 59/504 (11%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
L + E+ LL +L E+ VL L K+ +++ I +I +DL++ + I
Sbjct: 123 LYLHEVETLLCQLEQRTKEDEQTEVLHALCKQATDLDLRTFIRLIKQDLRINARARHILD 182
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKD-----------------RNQRHKRQDIEVGKAVRP 226
F P A + + DL + E + + I+V V P
Sbjct: 183 AFGPQAYPAYQSSRDLTAIVENFAGSQDTSTAPKTPAKAAGGKKMKVASSGIQVMTPVSP 242
Query: 227 QLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHA 283
LA A++K + + E K+DG+R+QIHK G E +FSR+ +DH +
Sbjct: 243 MLANACKSVEEAFKK-NPDGLYSEIKYDGERVQIHKQGDEFKFFSRNLKPVMDH-KIKDL 300
Query: 284 MSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFD- 342
I D ILD E+++ DT FG+ A + + +C F FD
Sbjct: 301 KDYIPRAFPGADDMILDSEIILVDTETGSLLPFGT----LGAHKKHTFENASVCLFVFDC 356
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
+LY GD + ++R E+L+K +KP K SHV + S
Sbjct: 357 LLYDGD-DLTQVEFRKRREILEKNIKPIK-------------SHV----QLSESEFLKTK 398
Query: 403 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGG 459
E+ + ++ EG+VLK+ ++PG R+ WLK+K +Y+ G D++++G
Sbjct: 399 KELALMTAKVLQANLEGVVLKNPAGTYQPGKRN--WLKVKKDYLFGGKMADTADLVVLGA 456
Query: 460 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
+YGSG++GG ++ FL+ D + + +V +GL D D V L +
Sbjct: 457 WYGSGKKGGVLSIFLMGCF-----DARDHLWKTVTKVHSGLDDVTNDDVHEALMKLTDRA 511
Query: 520 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 579
+ K PS+ + PDV + PE+ + IT T +A S+RFPRI
Sbjct: 512 DANK--IPSW--LLCKKALVPDVLAKVPEQMPVWEITGAEFTQSEAHTAAGISIRFPRIT 567
Query: 580 RVRYDKPWHDCLDVQSFVELVHSS 603
R+R DK D++ +L +S
Sbjct: 568 RLRSDKSAMQANDLEHLEQLYAAS 591
>gi|395528668|ref|XP_003766449.1| PREDICTED: DNA ligase 1, partial [Sarcophilus harrisii]
Length = 709
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 135/522 (25%), Positives = 222/522 (42%), Gaps = 94/522 (18%)
Query: 120 ISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEK 179
++ + +L D+ RL S ++KI ++ L E ++I + L+LG++E+
Sbjct: 188 LTAAGVLSKLRDIA-RLTGSAATSKKIEIIKGLFVACRHSEARFIARALSGRLRLGLAEQ 246
Query: 180 SIF-------------HEFHPDAED-----------------------LFNVTCDLKLVC 203
S+ EF P D F DL L+
Sbjct: 247 SVLAALAQAVSLTPPGQEFPPAVVDAGKGKAAEARKSWLEEKGLILKQTFCEVPDLDLII 306
Query: 204 EKLKDR--NQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH 261
L +Q + + G ++P LA ++ E K+DG R QIH
Sbjct: 307 PALLKHGLDQLPQHCQLTPGVPLKPMLAHPTRGIGEVLKRFEESAFTCEYKYDGQRAQIH 366
Query: 262 --KNGSEIHYFSRSFLDHS-EYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFG 317
NG ++ FSR+ D++ Y +S++ + + V CILD E + WD + + F
Sbjct: 367 VLDNG-DVKIFSRNQEDNTGRYPDVISRVPKMKRPSVVSCILDSEAVAWDRAKKQIQPFQ 425
Query: 318 SNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETL 377
+ D Q+C +AFD++Y+ S++ + L R +LL++
Sbjct: 426 VLSTRKRKEVDESDIQVQVCLYAFDLIYLNGQSLVREPLSRRRQLLRE------------ 473
Query: 378 VPDHGLNSHVRPQGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGD 433
+ + +GE + SL + +++ F ++++++ EG+++K L + +E
Sbjct: 474 -------NFIETEGEFVFATSLDTEDTEQIADFLEQSVKDSCEGLMVKTLETNATYEIAK 526
Query: 434 RSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFIS 492
RS WLKLK +Y+ G LD+++IG Y G G+R G FL+A A D F +
Sbjct: 527 RSHNWLKLKKDYLEGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----AFDEDSEEFQA 581
Query: 493 FCRVGTGLSDEELDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE 548
C++GTG SDEEL+ L+ P R Y + A P PD W+E
Sbjct: 582 ICKLGTGFSDEELEEHYQNLQALVIPAPRSYVRAEGAVP------------PDHWLEPTT 629
Query: 549 ----KSIILSITSDIRTIRSEVFS-APYSLRFPRIDRVRYDK 585
K LS++ R V S SLRFPR +VR DK
Sbjct: 630 VWEVKCADLSVSPIYSAARGLVESDKGISLRFPRFVQVRKDK 671
>gi|398019792|ref|XP_003863060.1| DNA ligase I, putative [Leishmania donovani]
gi|322501291|emb|CBZ36370.1| DNA ligase I, putative [Leishmania donovani]
Length = 667
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 187/406 (46%), Gaps = 49/406 (12%)
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSE-IHYFSRSFLD 276
I G V+PQLA +L GK+ E K+DG+R QIH + + H FSR+
Sbjct: 288 IRPGLPVKPQLAYPTSSITVILDRLQGKKFTSEYKYDGERAQIHYDKDKGFHIFSRNSET 347
Query: 277 HS-EYGHAMSKI--IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD 333
H+ +Y +S + + V V ILD E++ F Q + R ++ +
Sbjct: 348 HTGKYPDVISMLPKVFDPVEVQSFILDSEVVAVHPETGALQAF---QVLQHRGRKNIAEE 404
Query: 334 R---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQ 390
+C F FD+LY ++++L++R ELL + + P +L
Sbjct: 405 DVSIPVCVFVFDILYFNGEPQLNKTLQQRRELLWRCIHPLPAKLSF-------------- 450
Query: 391 GEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA 448
L + V++++ F + +I + EG+++K L + + P RS WLKLK +Y+
Sbjct: 451 ---ATYLDSDKVEDIQTFLERSIADGCEGLMVKTLDEEANYTPAKRSHYWLKLKKDYMDG 507
Query: 449 GSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA 507
+D LD++ I ++G G+R G FL+A + P D Y S C++GTG DEEL+
Sbjct: 508 VTDTLDLVPIAAFHGKGKRTGVFGGFLLACYD-PKADEYQ----SICKIGTGFQDEELEK 562
Query: 508 VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIR 563
+ LKP+ + P +Y+ E PDVW+ + K+ LS++ +
Sbjct: 563 LTQSLKPFVVDDK------PRYYRAGG---EEPDVWLTEAQVWEVKAADLSVSPVHQAAV 613
Query: 564 SEV-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 608
V S +LRFPR R R DK D + Q ++ + + Q
Sbjct: 614 GLVDPSKGIALRFPRYLRQREDKKPADATNAQQVADMYKAQSLAVQ 659
>gi|432328175|ref|YP_007246319.1| ATP-dependent DNA ligase I [Aciduliprofundum sp. MAR08-339]
gi|432134884|gb|AGB04153.1| ATP-dependent DNA ligase I [Aciduliprofundum sp. MAR08-339]
Length = 589
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 134/523 (25%), Positives = 239/523 (45%), Gaps = 56/523 (10%)
Query: 103 GNFPMVAAEVLQR-RQGMI-----SGGLTIKELNDLLDRLASSENRAE---KISVLSTLI 153
G+ +VA E +++ RQ + LT++++ + +++A +E KI +L+ L+
Sbjct: 88 GDLGIVAEEAIKKKRQTTLFSFEEEKKLTVEKVYENFEKIARAEGEGSQDRKIQLLAELL 147
Query: 154 KKTNAQEMKWIIMIILKDLKLGISEKSIF----------HEFHPDAEDLFNVTCDLKLVC 203
+ E ++I+ + L+LGI++ +I E E +N+ DL +
Sbjct: 148 NLASPLEARYIVRTVEGKLRLGIADMTILDALSIAFGGSKELRSFVERAYNIHPDLGFIA 207
Query: 204 EKLKDRN-QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK 262
+KL + K I++G +R LA R+ K+ G+ E K+DG RIQ H
Sbjct: 208 KKLAVEGIEGVKGIKIQLGIPIRAMLAERLPSLEEILAKMGGR-AAFEYKYDGMRIQGH- 265
Query: 263 NGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFG--SNQ 320
G +I +SR + + + + +++ + I DGE + D + F S++
Sbjct: 266 VGKKIWLYSRRLENLTSQFPDVVEALKEAFKGEEGIFDGEAVPVDINTGELLPFQVVSHR 325
Query: 321 EIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPD 380
K + D + F FDVLY+ + + ER ++L++V++P+ D
Sbjct: 326 RGRKYGIEKAMEDYPVVLFLFDVLYLDGEDLTQKPYPERRKILERVIQPT---------D 376
Query: 381 HGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKW 438
+H +V+ ++ E++ FF IE+ EG+V K++G S + G R W
Sbjct: 377 RVKFAH---------RIVSSDISEIKDFFNHAIEDGCEGLVAKNVGEESIYRAGAREFLW 427
Query: 439 LKLKPEY-IRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVG 497
+K K +Y + G +D++++G + G GRR G L+A A P D RF + C++G
Sbjct: 428 IKYKKDYKVEMGDTVDLVVVGAFAGKGRRKGTYGALLMA-AYNPEKD----RFETVCKLG 482
Query: 498 TGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS 557
+G +DE+L L F + + KR P + ++ + P V +E I LS T
Sbjct: 483 SGFTDEQL----AHLPKKFEELKIEKRHPRVWSKMDADYWFVPKVVLEVIGAEITLSPTH 538
Query: 558 DIRTIRSEVFSAPYSLRFPRID-RVRYDKPWHDCLDVQSFVEL 599
E S ++RFPR R R DK + + VE+
Sbjct: 539 TCARDVVEKGSG-LAIRFPRFTGRWRDDKSPEEATTTKELVEM 580
>gi|410720583|ref|ZP_11359937.1| ATP-dependent DNA ligase I [Methanobacterium sp. Maddingley MBC34]
gi|410600710|gb|EKQ55235.1| ATP-dependent DNA ligase I [Methanobacterium sp. Maddingley MBC34]
Length = 557
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 157/608 (25%), Positives = 270/608 (44%), Gaps = 113/608 (18%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDS------VDYFSALRLILPSLDRERGSYGL 65
LV ++ + T +K KF D + +L I P+ E G+
Sbjct: 6 LVEVYQDLDSTTKRLEKTDILAKFFAKVGDEDPELLPIVTLLSLGRIFPTWSEE--ELGI 63
Query: 66 KESVLANCLIDALGMS-KDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQ--GMISG 122
+L + A+G+S +D + +R + G+ A E+ Q++ + S
Sbjct: 64 GSKLLMKAISQAVGVSPEDVENRMR-----------DTGDIGEAAEELYQKKSQVTLFSR 112
Query: 123 GLTIKELNDLLDRLAS-SENRAE--KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEK 179
LTI +++ L ++A S NRA+ KI L L+ + E K+I +L++L++G+ E
Sbjct: 113 PLTIVKVHRNLVKMAEISGNRAQFKKIDYLMELLSSASPSEAKYITRTVLEELRVGVGEG 172
Query: 180 SI-------FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ-DIEVGKAVRPQLA-- 229
+I F AE +T D+ LV E + + R+ ++ GK V+P LA
Sbjct: 173 TIRDAISQAFDIPKEVAERAHMLTNDMGLVAEVARMEGEEGLRKLTLKPGKPVKPMLAQL 232
Query: 230 ---MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSK 286
+ + W + E K+DG R+QIH++G +I F+R + S +S
Sbjct: 233 SPGINVSVGEMGW-------AICETKYDGIRVQIHRHGDKIDIFTRRLENISLALPEISD 285
Query: 287 IIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR-----DGLSSDRQLCYFAF 341
I+Q++ + I++GE++ +R + S Q + + R D + S L + F
Sbjct: 286 YIKQSLPQEDFIVEGEIIA-----SRDGKPISFQYMLQRVRRKYEIDKMISKIPLTVYLF 340
Query: 342 DVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHN 401
DVLY ++ + L+ER + L+ +VK ++G+LE L++ V+ E +
Sbjct: 341 DVLYY-RGPILDEPLQERRKTLESIVKVAEGKLE-------LSAQVKVTPEEIY------ 386
Query: 402 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYY 461
+ + F+ +I+ EGI++KD + + PG R K LKLK E LD++++GG Y
Sbjct: 387 --KAQDLFERSIKGGHEGIMIKDPHAPYMPGIRGKKMLKLKAE----PETLDLVVVGGTY 440
Query: 462 GSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 521
G G+R + +L+AL + + + TGL D L + ++P
Sbjct: 441 GKGKRAHFIGSYLMALQDE------DNQLKTLAYAATGLDDNTLMELSQMVEPLI----- 489
Query: 522 PKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-----YSLRFP 576
SK+ V IE S+IL I SE+ +P YSLRFP
Sbjct: 490 -------------ISKDGRQVKIEP---SVILEIAF------SEIVESPESETGYSLRFP 527
Query: 577 RIDRVRYD 584
+ R+R D
Sbjct: 528 VVKRIRND 535
>gi|242008676|ref|XP_002425128.1| DNA ligase, putative [Pediculus humanus corporis]
gi|212508802|gb|EEB12390.1| DNA ligase, putative [Pediculus humanus corporis]
Length = 786
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 180/418 (43%), Gaps = 77/418 (18%)
Query: 214 KRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFS 271
K I G ++P LA + E E K+DG+R QIH +NG ++ FS
Sbjct: 399 KHCKITPGLPMKPMLAQPTKGVQEVLTRFEDMEFTCEWKYDGERAQIHYLENG-KVKIFS 457
Query: 272 RSFLDH-SEYGHAMSKIIEQNVLVDRC---ILDGEMLVWDTSLNRFAEFGSNQEIAKAAR 327
R+ D+ S+Y +S+I Q V D ILD E + WD N F I + +
Sbjct: 458 RNQEDNTSKYPDIISRI--QQVKKDSVTSFILDCEAVAWDKENNAILPF--QVLIKRKRK 513
Query: 328 DGLSSDRQ--LCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNS 385
D SD + +C + FD+LY+ ++ + +R LLQ+ G
Sbjct: 514 DVAESDIKVPVCVYMFDLLYLNGKPLVKEKFIDRRRLLQENFNEVLGE------------ 561
Query: 386 HVRPQGEPCWSLV----AHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWL 439
W+ ++EV++F +E+I+ EG+++K L + +E RS WL
Sbjct: 562 ---------WTFAKSIDTTKMEEVQEFLEESIKGNCEGLMVKTLREEATYEIAKRSKNWL 612
Query: 440 KLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGT 498
KLK +Y+ G LD++++GGY G G+R G FL+ D + S C++GT
Sbjct: 613 KLKKDYLEGVGDTLDLVVLGGYLGKGKRTGTYGGFLIGCY-----DNDNEEYQSICKLGT 667
Query: 499 GLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE------------- 545
G SDE L KP+ PS+YQ ++ PD W E
Sbjct: 668 GFSDESLAQHTEFFKPHVI------TQAPSYYQY--DTSMEPDHWFEPIQVWETKCADFS 719
Query: 546 -SPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
SP + + ++ I SLRFPR R+R DK D Q ++L H+
Sbjct: 720 LSPIHRAAVGVVDPVKGI---------SLRFPRFLRIRDDKKPEDATTAQQIIDLYHN 768
>gi|448516161|ref|XP_003867506.1| Cdc9 protein [Candida orthopsilosis Co 90-125]
gi|380351845|emb|CCG22069.1| Cdc9 protein [Candida orthopsilosis]
Length = 760
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 184/397 (46%), Gaps = 51/397 (12%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHS 278
G ++P LA + ++ E K+DG+R QIH NG ++ +SR+ D S
Sbjct: 388 GIPLKPMLAKPTKSMSEVLDRFQDEKFTCEYKYDGERAQIHLLPNG-DVRIYSRNSEDMS 446
Query: 279 E-YGHAMSKIIEQNVLVDRC--ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQ 335
+ Y +S I E + + ILD E + WD + F + + L
Sbjct: 447 QRYPDLISIIREFSKAQEHTSLILDCEAVAWDRINKKILPFQVLSTRKRKDVNELDITVH 506
Query: 336 LCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW 395
+C FAFD+LY + S++ +SL ER ++ + P +G+ +
Sbjct: 507 ICLFAFDLLYYNNESLLTKSLSERRSIMFTHLHPLEGKFQF-----------------AT 549
Query: 396 SLVAHNVDEVEKFFKETIENRDEGIVLKDL-GSK--WEPGDRSGKWLKLKPEYIRA-GSD 451
S + +++ +++F +++ + EG+++K L GS+ +EP RS WLKLK +Y+ G
Sbjct: 550 SKDSTSLEVLQQFLDQSVHDSCEGLMVKMLEGSESYYEPSKRSRNWLKLKKDYLAGVGDS 609
Query: 452 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 511
LD+++IG Y G G+R G FL+A + D + C++GTG SDE L + K
Sbjct: 610 LDLVVIGAYNGKGKRTGTYGGFLLATYNQDTGD-----LETTCKIGTGFSDEMLTQLYQK 664
Query: 512 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY 571
L P E P R F NS PDVW E + +T+D+ S ++ A +
Sbjct: 665 LHP----SEIP-RPKEYFVYDKTNSNAVPDVWFEP--TMLFEVLTADLSL--SPIYKAAH 715
Query: 572 -------SLRFPRIDRVRYDKPWHDC---LDVQSFVE 598
SLRFPR R+R DK D DV F E
Sbjct: 716 NEYGKGISLRFPRFLRIRDDKAIEDATSSTDVAEFYE 752
>gi|325188612|emb|CCA23144.1| DNA ligase putative [Albugo laibachii Nc14]
Length = 882
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 183/392 (46%), Gaps = 56/392 (14%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG---SEIHYFSRSFLDH 277
G V P LA + + GK E K+DG+R QIH ++H FSR+F +
Sbjct: 484 GTPVAPMLARPTKTYAMVFDRFQGKPFTCEYKYDGERAQIHLESHAQQKVHIFSRNFENT 543
Query: 278 SE----YGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD 333
+E I + +D CI+D E++ D + F Q ++ +R + +
Sbjct: 544 TERFPDVKMNFLNAISASEGLDNCIMDAEIVAIDRITRKRLPF---QVLSTRSRKNVRIE 600
Query: 334 R---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETL----VPD--HGLN 384
+C +AFD+LY+ S++ +SL+ER E L + +P G E + V D H ++
Sbjct: 601 DIKVAVCVYAFDLLYLNGDSLLSKSLRERREKLHALFQPQDGSFENVQCMDVTDTRHDID 660
Query: 385 SHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLK 442
S + + + F ++ E EG+++K L + +EP +RS KWLK+K
Sbjct: 661 SDALEEA----------ISHIRSFLEKATEEHCEGLMVKTLDEDATYEPANRSHKWLKVK 710
Query: 443 PEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLS 501
+Y+ G D++ IG ++G G+R G +L+A + P D Y ++GTGLS
Sbjct: 711 KDYLDGIGDSTDLIPIGAFHGRGKRTGVYGAYLLACYD-PDLDMYQ----CITKLGTGLS 765
Query: 502 DEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE--------SPEKSIIL 553
DE L + +L+ +K E P Y VT+N K PDVW E + SI
Sbjct: 766 DEMLRELHAQLQS--KKVE----QIPREYVVTDNIK--PDVWFEPSCVWEILGADLSISP 817
Query: 554 SITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
T+ + I E SLRFPR R+R DK
Sbjct: 818 KYTAAMGLIARE---KGISLRFPRFIRIRDDK 846
>gi|290559352|gb|EFD92686.1| DNA ligase I, ATP-dependent Dnl1 [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 576
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 141/522 (27%), Positives = 239/522 (45%), Gaps = 69/522 (13%)
Query: 103 GNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLA--SSENRA-EKISVLSTLIKKTNAQ 159
G+ VA + ++G L++KE+ D L ++A S E +KI+ L+ ++K +
Sbjct: 88 GDMGEVAEKECTSKEG---NDLSVKEVYDRLLQIARISGEGSVDQKITQLAEILKACSPT 144
Query: 160 EMKWIIMIILKDLKLGISEKSIFH----------EFHPDAEDLFNVTCDLKLVCEKLKDR 209
E K+++ I+ L+LG+ E +I EF E FN+ DL V + L +
Sbjct: 145 EAKFLMRFIMGKLRLGVGEATIMEALSKAKTGNREFKKKIERAFNLCSDLGYVSDVLYSK 204
Query: 210 NQRHKRQ-DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIH 268
+ +I K +RP LA R + ++ GK I+ K DG R Q+HKNG EI
Sbjct: 205 GKEGIENFNISAMKPIRPALAERASSSEEIISRM-GK-CAIDQKLDGFRAQVHKNGQEIK 262
Query: 269 YFSRSFLDHSEYGHAMSKIIEQ--NVLVDRCILDGEMLVWDTSLNRFAEFG-SNQEIAKA 325
FSR+ + + H M +++ + + D ILD E L +D + F + Q K
Sbjct: 263 VFSRNLENIT---HFMPEVVNEIKKMKYDSFILDSEALTYDENTGVLYPFQITIQRRRKH 319
Query: 326 ARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNS 385
+ +S D L F FD++++ S+I ER + ++ L D +
Sbjct: 320 NIEEVSQDLPLRLFVFDIMFLNGNSMIDLPYSERRK-----------EIDHLFSDTDTIA 368
Query: 386 HVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEY 445
+ +V + ++++KFF +E+ EGIV K L S + G R+ W+K+K Y
Sbjct: 369 KTK-------MIVTDDPNKIDKFFDSALESGLEGIVAKRLESVYSAGARNFNWIKMKRSY 421
Query: 446 IRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+D +D++I+G + G G R ++ P DT F + +VG+G S+E+
Sbjct: 422 KSKLNDTIDLVILGYFKGRGHRANFGIGAVLGGVYDPESDT----FKTLTKVGSGFSEEQ 477
Query: 505 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRS 564
+ KL + P R +S +PDVW P+ ++++ +D RS
Sbjct: 478 FKELY-KLLNDIKVDSKPARV---------DSILQPDVWT-VPK--YVITVKAD-EITRS 523
Query: 565 EVFSA------PYSLRFPR-IDRVRYDKPWHDCLDVQSFVEL 599
+A Y+LRFPR + +R DK D V+ +E+
Sbjct: 524 PTHTAGMKDGIGYALRFPRAMTFIRQDKKAEDSNTVKDIIEM 565
>gi|312136730|ref|YP_004004067.1| DNA ligase i, ATP-dependent dnl1 [Methanothermus fervidus DSM 2088]
gi|311224449|gb|ADP77305.1| DNA ligase I, ATP-dependent Dnl1 [Methanothermus fervidus DSM 2088]
Length = 554
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 156/612 (25%), Positives = 267/612 (43%), Gaps = 99/612 (16%)
Query: 10 IVLVSLFNWIQKTKPAAKKRSKFRKFL---DTYCDSVDYFSALRLILPSLDRERGSYGLK 66
I LV L+ ++ T KK KFL D L + P + G K
Sbjct: 4 IKLVELYEKLESTTKKLKKIDLLSKFLSEVDKELLPAVVLMTLGTVFPGWSEKELGVGFK 63
Query: 67 ESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGM--ISGGL 124
V A ++ + +K G+ + A ++ ++R+ + I+ L
Sbjct: 64 LLVKAMSIVSGISANKIEEKIA------------EEGDVGLAAEKLFKKRRQVTFITQPL 111
Query: 125 TIKELNDLLDRLASSEN---RAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE--- 178
T++++ L ++A + KI++++ ++ +E K++ +IL++L++G+ E
Sbjct: 112 TVEKVYTNLKKVADITGEGAQTRKINLITDILSLAKPKEAKYLTRMILEELRVGVGEGIM 171
Query: 179 -KSIFHEFHPD---AEDLFNVTCDLKLV----CEKLKDRNQRHKRQDIEVGKAVRPQLAM 230
+I F D E +T DL LV CEK + K+ ++ G+ V+P LA
Sbjct: 172 RDAIAKAFKVDPKIVERAHMLTNDLGLVAKVACEK---GVEGLKQLSLKPGRPVKPMLAQ 228
Query: 231 RIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQ 290
A ++ GK E K+DG R+QIH+ SEI F+R + + + +E+
Sbjct: 229 TAPSIKKAIEEM-GK-AFCETKYDGIRVQIHRKNSEIVVFTRRLENITNAVPDIVDAVEK 286
Query: 291 NVLVDRCILDGEML--------VWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFD 342
+ I++GE++ + L+R EI KA ++ F FD
Sbjct: 287 ALPKKDFIVEGEIIGVKNGRPIPFQYLLHRIR---RKYEIEKAIKE-----IPFTLFLFD 338
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
VLY + +I + + R ++L+ + K +G++E L+ V + N+
Sbjct: 339 VLYF-ENPLIDEKFENRRKILESITKTKEGKVE-------LSRKV--------EVTCENI 382
Query: 403 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYG 462
D+ EK FKE+IE EGI++KD + + PG R K LK K E LD+++IGG YG
Sbjct: 383 DDAEKLFKESIEAGHEGIMIKDPNAPYIPGIRGKKMLKYKAE----PETLDLVVIGGDYG 438
Query: 463 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
G+R V +LVA + + P V TGL D+ L + +++
Sbjct: 439 EGKRAHLVGSYLVAARDEDTGELKP-----VAHVATGLDDDTLKNLTERME--------- 484
Query: 523 KRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVR 582
++ N K + IE K I+ S+I ++S + + YSLRFP + R+R
Sbjct: 485 --------RIMVNKKGK---KIEVEPKIILEVAFSEI--VKSPEYESGYSLRFPVVKRIR 531
Query: 583 YDKPWHDCLDVQ 594
D D VQ
Sbjct: 532 DDLSLEDVDTVQ 543
>gi|195445000|ref|XP_002070126.1| GK11194 [Drosophila willistoni]
gi|194166211|gb|EDW81112.1| GK11194 [Drosophila willistoni]
Length = 796
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/504 (23%), Positives = 221/504 (43%), Gaps = 65/504 (12%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
L ++E+++LL +L ++ +L L KK +++ I +I +DL++ + I
Sbjct: 122 LYLQEVDELLRQLEQKTKEDDQTELLKELCKKATELDLRTFIRLIKQDLRINARARHILD 181
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD-----------IEVGKAVRPQLAMRI 232
F P A + + DL + ++ + + + + I+V + P LA
Sbjct: 182 AFGPLAYPAYQSSRDLTAIVQQFAGKAVKTQAKSPAKKLKTTTSAIQVMTPISPMLANAC 241
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIE 289
A++K + + E K+DG+R+QIHK G E +FSR+ +DH KI
Sbjct: 242 KSVEEAFKK-NPAGLFGEVKYDGERVQIHKKGKEFKFFSRNLKPVMDH--------KIKR 292
Query: 290 QNVLVDRC-------ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFD 342
+ R ILD E+++ DT FG+ A + ++ +C F FD
Sbjct: 293 LTEYIPRAFPGAGDMILDSEIILVDTETGALLPFGT----LGAHKKHEYANASVCLFVFD 348
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
+ ++ ++R E+L++ ++P K ++ S
Sbjct: 349 CILYDGEDLMQLEFRKRREILEQNIEPIKSYVQL-----------------SESQFLKTK 391
Query: 403 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI---RAGSDLDVLIIGG 459
E+ + ++ EG+VLK+ ++PG R+ WLK+K +Y+ + D++++G
Sbjct: 392 SELAMMTAKVLQANLEGVVLKNPNGTYQPGKRN--WLKVKKDYLFDGKMADTADLVVLGA 449
Query: 460 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
+YGSG++GG ++ FL+ D R + + +V +GL D D + L +
Sbjct: 450 WYGSGKKGGVLSIFLMGCY-----DPKDRLWKTVTKVHSGLDDSTNDEIHENLMKLTTRA 504
Query: 520 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 579
+ K P++ + PDV P+K + IT T +A S+RFPRI
Sbjct: 505 DANK--TPNWLLCKKSL--VPDVLAVDPQKMPVWEITGAEFTKSEAHTAAGVSIRFPRIT 560
Query: 580 RVRYDKPWHDCLDVQSFVELVHSS 603
R+R DK + D+ + L +S
Sbjct: 561 RLRSDKTSKEANDLPHLLNLYEAS 584
>gi|333986415|ref|YP_004519022.1| DNA ligase [Methanobacterium sp. SWAN-1]
gi|333824559|gb|AEG17221.1| DNA ligase [Methanobacterium sp. SWAN-1]
Length = 561
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 159/615 (25%), Positives = 264/615 (42%), Gaps = 106/615 (17%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDS------VDYFSALRLILPSLDRERGSYGL 65
LV ++ + T +K S KF + + +L I P+ E G
Sbjct: 12 LVEVYEALDSTTKRLEKTSILAKFFKIMGNEEPELLPIVTLMSLGRIFPTWSEEELGLGS 71
Query: 66 KESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQG---MISG 122
K + A L+ +G D + R +AG+ + A +L+R+Q
Sbjct: 72 KLLMKAISLVAGVG-PDDVENMTR-----------DAGDIGLAAETLLKRKQQSTLFARQ 119
Query: 123 GLTIKELNDLLDRLAS-SENRAE--KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEK 179
LTI++++ L ++ S NRA+ K+ +L L + +E K+I +L++L++G+ E
Sbjct: 120 PLTIEKVHSNLIKITKISGNRAQNKKMEILRELFSSASPKEAKYITRTVLEELRVGVGEG 179
Query: 180 SI-------FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRH-KRQDIEVGKAVRPQLA-- 229
+I F E +T DL LV E K+ + + ++ GK V+P LA
Sbjct: 180 TIKDAISEAFEVEKTAVERAHMLTNDLGLVAEVAKEEGEEGLGKLTLKPGKPVKPMLAQL 239
Query: 230 ---MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSK 286
++I W + E K+DG R+QIH+ G +I+ F+R + S + +
Sbjct: 240 SPGIKISVEEMGW-------ALCETKYDGIRVQIHRLGDDINIFTRRLENISNAVPEIVE 292
Query: 287 IIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR-----DGLSSDRQLCYFAF 341
I +++ I++GE++V R + S Q I + R + + L + F
Sbjct: 293 YIRKSLPACDFIVEGEIIV-----TRDGKPISFQYILQRVRRKYDIEKMREKVPLKLYLF 347
Query: 342 DVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHN 401
DVLY D I +ER +L+ +V ++ +LE L+S V+ E W
Sbjct: 348 DVLYY-DGPQIDTPFEERRRILESIVTVTEHKLE-------LSSQVKTTPEEIW------ 393
Query: 402 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLK--PEYIRAGSDLDVLIIGG 459
+ E F +I+ EGI++KD + + PG R K LKLK PE LD++I+GG
Sbjct: 394 --KAEDLFTASIKGGHEGIMIKDPHAPYMPGIRGKKMLKLKAVPE------TLDLVIVGG 445
Query: 460 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
YG GRR + +L+A+ + F + TGL D L + ++P K
Sbjct: 446 TYGKGRRAHVIGSYLLAVRDE------NNDFKTLAHAATGLDDNMLIELSRMVEPLIVKK 499
Query: 520 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 579
K ++T SIIL I ++S + + YSLRFP +
Sbjct: 500 MGRK------VEIT---------------PSIILEIAYS-EIVKSPEYESGYSLRFPVVK 537
Query: 580 RVRYDKPWHDCLDVQ 594
R+R D D V+
Sbjct: 538 RIREDIGLDDIDTVE 552
>gi|330506981|ref|YP_004383409.1| DNA ligase [Methanosaeta concilii GP6]
gi|328927789|gb|AEB67591.1| DNA ligase [Methanosaeta concilii GP6]
Length = 556
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 219/484 (45%), Gaps = 80/484 (16%)
Query: 124 LTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE-- 178
L+IKE+ L +A + + K+ L L + E ++I + ++D+++GI E
Sbjct: 116 LSIKEVYQRLVAVARASGKGSQDAKVKNLQYLFSQATPLEAQYIARLAIEDMRIGIGEGG 175
Query: 179 --KSIFHEFHPDA---EDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIG 233
+I F DA E +N+T D+ LV + R + + ++ LA ++G
Sbjct: 176 VRDAIAQAFSQDASKVERAYNLTNDIGLVA--VNARKGTLADLSVLINHPIKMMLA-QVG 232
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE--QN 291
+ +A + G IE K+DG R+QIHK+G + FSR D + ++ +I+ Q
Sbjct: 233 EGISASMQELGS-AAIEWKYDGARVQIHKDGKRVRIFSRRLEDVT---RSLPEIVRLAQE 288
Query: 292 VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQ-----LCYFAFDVLYV 346
V D+ ILDGE++ ++ + + + QEI K R + ++Q L F FD++Y+
Sbjct: 289 VRADKAILDGEVV----AIGKDSRPLAFQEILKRFRRKYNVEKQAKETPLHLFLFDLIYL 344
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
S + L R ELL+ + PS ++ D +++ +V E
Sbjct: 345 DGQSTVDLPLTRRRELLEGIADPS------ILADQ---------------VISDSVQRAE 383
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRR 466
+ + + +E EG++LK+ S + PG R WLK+KP LD+ +IG +G GRR
Sbjct: 384 EIYHQALEKGHEGLILKNSMSVYAPGKRGKNWLKIKP----VMETLDLAVIGAKWGEGRR 439
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
+ + +A D + V TGL+DE L +L FR+
Sbjct: 440 ASFLGSYRLA-----CLDEATSKLQDIGWVATGLTDEAL----AELTELFREL------- 483
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
Q + +P V E + I +S+ +S+ Y+LRFPR+ RVR DK
Sbjct: 484 -ILVQNGMEVELKPAVIFEVAYEEI----------QKSQSYSSGYALRFPRLVRVRDDKS 532
Query: 587 WHDC 590
+
Sbjct: 533 LEEA 536
>gi|313679806|ref|YP_004057545.1| DNA ligase i, ATP-dependent dnl1 [Oceanithermus profundus DSM
14977]
gi|313152521|gb|ADR36372.1| DNA ligase I, ATP-dependent Dnl1 [Oceanithermus profundus DSM
14977]
Length = 571
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 142/526 (26%), Positives = 225/526 (42%), Gaps = 67/526 (12%)
Query: 98 AAPNAGNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSE---NRAEKISVLSTLIK 154
A G+ A EVL RR +GGL+++ + L +A ++A K LS L+
Sbjct: 83 AVKEKGDIGAYALEVLPRR----AGGLSLRHVYGELRAIAEDAGPGSQARKRERLSRLVA 138
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIFHEF----------HPDAEDLFNVTCDLKLVCE 204
+ + +E I+ + L+LG+ + ++ P E +N+T DL V
Sbjct: 139 EASPEEAAVILRTVTGRLRLGVGDATVLEALALAFLGDRAKKPLLERAYNLTSDLAYVAR 198
Query: 205 KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG 264
+ + ++ +EVGK VR LA R+ KL E K+DG+R+Q+H +G
Sbjct: 199 LALEGEEALRQVKLEVGKPVRMMLAERLPGPEQIMEKLGPH--FAEHKYDGERVQVHFDG 256
Query: 265 SEIHYFSRSFLDHSEYGHAMSKIIE--QNVLVDRCILDGEMLVWDTSLNRFAEFGS--NQ 320
+SR + + H ++E + V IL+ E +V D F + N+
Sbjct: 257 ERFWVYSRRLENIT---HQYPDLLEALREVQHGPFILEAEAVVTDPVTGEMRPFQNVLNR 313
Query: 321 EIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPD 380
++ K L + F F++LY +I + ER E L++ +P + RLE
Sbjct: 314 KV-KHLTPELLEKYPIKGFVFELLYADGEVLIERPYSERRERLERWFRPHE-RLEL---- 367
Query: 381 HGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLK 440
+E+ +FF +IE EG+V K +E G R KW+K
Sbjct: 368 -------------STKRFVETTEELVQFFDASIEAGCEGLVCKKPDGDYEAGKRGFKWVK 414
Query: 441 LKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 499
K SD LD++I+G + G GRR G L A A P D RF + +VG+G
Sbjct: 415 YKRGIAGKLSDTLDLVIVGAWLGRGRRAGTYGSLLAA-AYNPDED----RFETLTKVGSG 469
Query: 500 LSDEELDAVVT-KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
SDE+L+ V+ +L PY R +P+ S PDVW E + + +
Sbjct: 470 FSDEDLNEVLPRRLDPYRRGERHPR----------VWSLLEPDVWFEPVQVIEVEAQEIT 519
Query: 559 IRTIRSEVFSA-----PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+ + F A +LRFPR R R DK + + VE+
Sbjct: 520 LSPNHTCAFGAVQEGRGLALRFPRFVRYRDDKSPEEATTTKEVVEM 565
>gi|300176568|emb|CBK24233.2| unnamed protein product [Blastocystis hominis]
Length = 645
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 133/526 (25%), Positives = 228/526 (43%), Gaps = 91/526 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH--------- 183
L +L + ++ K+ V+ L+ + E+K+++ + L++G++E+S+
Sbjct: 146 LAQLEGNSTQSRKVGVIKRLLVSAHGSEIKFLVRGLQGKLRVGLAEQSVLAALAHAVVLT 205
Query: 184 -------------EFHPDAEDLFNVTCDL---------------KLVCEKLK-DRNQRHK 214
H + L + D KL+ L+ +Q ++
Sbjct: 206 PPSATLPPPVLDASLHTNPAKLQTMLSDAVETVKQALSECPSYDKLIPAVLQAPLSQLNQ 265
Query: 215 RQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRS 273
+ G V P LA +L G++ E K+DG+R QIH+ I FSR+
Sbjct: 266 ICHLTPGIPVHPMLAKPTKGISEVLDRLQGRQFTCEFKYDGERAQIHRREDGTIKIFSRN 325
Query: 274 FLDHSEYGHAMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS 331
D++ + K ++ V V I+D E + WD R F Q ++ AR +
Sbjct: 326 NEDNTSKYPDLVKALQDCVSASVGTFIVDSECVAWDREAKRILPF---QILSTRARKEVK 382
Query: 332 SDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLE--TLVPDHGLNSH 386
+ + FAFD+L++ S+I + L+ER LL++ K +G++ + + D+
Sbjct: 383 EEEVKIHVVIFAFDLLFLNGESLIQKPLRERRALLRENFKEVEGKIHFASFMDDN----- 437
Query: 387 VRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPE 444
+ ++++ F E++ N EG+++K L + +EP RS WLKLK +
Sbjct: 438 --------------DTEKIQAFLLESVANGCEGLMIKTLEENATYEPSKRSLNWLKLKKD 483
Query: 445 YIR-AGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRV-GTGLSD 502
Y++ G +D++ IGGYYG G+R G FL+A D F S C+V GTG SD
Sbjct: 484 YLQDLGDSMDLVPIGGYYGKGKRTGNFGAFLLACF-----DESSEEFQSICKVIGTGFSD 538
Query: 503 EELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSD 558
+ L + +F P F N PDVW+ + ++ LSI S
Sbjct: 539 DALK----QYSEFFSNGNLLDHKLPIF---NVNPSVEPDVWLNPVQVWEVRAADLSI-SP 590
Query: 559 IRTIRSEVFSAP--YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
+ T + A +LRFPR R+R DK + + V+ S
Sbjct: 591 VHTAAIGLVDADKGIALRFPRFVRIREDKKPEEATTAEQVVDFYKS 636
>gi|223995863|ref|XP_002287605.1| ligase [Thalassiosira pseudonana CCMP1335]
gi|220976721|gb|EED95048.1| ligase [Thalassiosira pseudonana CCMP1335]
Length = 633
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 194/409 (47%), Gaps = 42/409 (10%)
Query: 210 NQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKN-GSEIH 268
+ HK ++ G V P LA ++L+G E K+DG+R Q+H +
Sbjct: 238 QEMHKACNLTPGIPVEPMLAKPTKSVLEVLKRLNGARFTCEYKYDGERAQVHMTPDGKTK 297
Query: 269 YFSRSFLDHSEYGHAMSKIIEQ---NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA 325
FSRS L+ SE + +++ V +LD E++ ++ +F F K
Sbjct: 298 VFSRSLLNTSEKFPEVPLYVQEACKETSVTSFVLDTEVVAFNRVTQQFVPFQVLSTRKKT 357
Query: 326 ARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVP-DHGLN 384
+ ++ AFD++Y+ S++ + L ER EL++K P G+ + DH +
Sbjct: 358 EESAEDAKVKVIVQAFDLMYLNGESLLDRPLAERRELMRKNFIPVPGKFQFATSLDHTED 417
Query: 385 SHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLK 442
+ VE+F ++ + EG+++K D+ + +EP RS WLKLK
Sbjct: 418 G---------------DTAVVEEFLDNAVKGQCEGLMVKTLDVNAAYEPSRRSLNWLKLK 462
Query: 443 PEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLS 501
+Y+ G +D++ +G Y+G G+R G +L+A+ E DT F S C++GTG S
Sbjct: 463 KDYLEGLGDSVDLVPLGAYHGRGKRTGVYGAYLLAVYEE---DT--EEFQSVCKIGTGFS 517
Query: 502 DEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITS 557
+E+L + LKP+ P+++ S Y V+++ + DVW ++ + K+ LS +S
Sbjct: 518 EEDLKELAASLKPHI----IPEKS--SQYVVSDSLE--CDVWFDAVQVWEVKAADLSKSS 569
Query: 558 DIRTIRSEVFSA--PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSN 604
+ + + LRFPR +RVR DK D +++ ++ +
Sbjct: 570 THKGAVDKTGESGRGIGLRFPRFERVRPDKKPEDATSADQILDMYYNQD 618
>gi|32968197|emb|CAA80615.2| DNA ligase I [Crithidia fasciculata]
Length = 766
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 188/414 (45%), Gaps = 51/414 (12%)
Query: 216 QDIEV--GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-KNGSEIHYFSR 272
QD+ + G V+PQLA +L GK E K+DG+R QIH + G FSR
Sbjct: 383 QDLSIRPGLPVKPQLAHPTSGIXVILDRLQGKRFTSEYKYDGERAQIHYQAGRGFQIFSR 442
Query: 273 SFLDHS-EYGHAMSKI--IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
+ H+ +Y +S + + V I+D E++ + F Q + R
Sbjct: 443 NSETHTGKYPDVISMLPKVFDAAAVHSFIIDSEVVAVNPETGALQAF---QVLQHRGRKN 499
Query: 330 LSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSH 386
++ + +C FAFD+LY + ++L+ER +L P L +H
Sbjct: 500 IAEEDVRIPVCVFAFDILYFNGEPQLGKTLQERRHVLWNAFTP-------LTAAFAFATH 552
Query: 387 VRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPE 444
L + NV++V+KF ++I + EG+++K L + + P RS WLK K +
Sbjct: 553 ----------LDSDNVEDVQKFLDKSIADGCEGLMVKTLEEQATYTPAKRSHFWLKFKKD 602
Query: 445 YIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDE 503
YI +D LD++ I +YG G+R G FL+A + P D Y S C++GTG DE
Sbjct: 603 YIDGVTDTLDLVPIAAFYGKGKRTGVFGGFLLACYD-PEADEYQ----SICKIGTGFPDE 657
Query: 504 ELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITS-D 558
EL+ + LKP+ + P +Y+ ++ PDVW+ + K+ LS++
Sbjct: 658 ELERLTQALKPFVVHDK------PRYYRAEDDG---PDVWLTEAQVWEVKAADLSVSPVH 708
Query: 559 IRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKE 612
I + +LRFPR R R DK D + Q ++ + + Q E
Sbjct: 709 YAAIGLVDLNKGIALRFPRYIRERDDKKPADATNAQQVADMYKAQSLAVQHDGE 762
>gi|301765093|ref|XP_002917926.1| PREDICTED: DNA ligase 1-like [Ailuropoda melanoleuca]
Length = 911
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 133/510 (26%), Positives = 218/510 (42%), Gaps = 95/510 (18%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RLA S + A+K+ V+ L E ++I + L+LG++E+S+
Sbjct: 403 IARLAGSASTAKKMDVIKGLFVACRHSEARYIARALSGRLRLGLAEQSVLAALSQAVSLT 462
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 463 PPGQEFPPAVVDAGKGRTAEARKTWLEEQAMILKQTFCEVPDLDRIIPVLLEHGLERLPE 522
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 523 HCK--LSPGVPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHVLEGGEVKIFS 580
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 581 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 640
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 641 AEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 681
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL + D++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 682 EGEFVFATSLDTKDTDQIAEFLEQSVKDSCEGLMVKTLDVNATYEIAKRSHNWLKLKKDY 741
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A A D + C++GTG SDEE
Sbjct: 742 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEE 796
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ KL+ P R Y V + PD W++ K LS++
Sbjct: 797 LEEHHRKLQALVLPTPRPY------------VRADGAVAPDHWLDPSAVWEVKCADLSLS 844
Query: 557 SDIRTIRSEV-FSAPYSLRFPRIDRVRYDK 585
R V SLRFPR R+R DK
Sbjct: 845 PIYPAARGLVDGEKGISLRFPRFIRIREDK 874
>gi|146094184|ref|XP_001467203.1| putative DNA ligase I [Leishmania infantum JPCM5]
gi|134071567|emb|CAM70256.1| putative DNA ligase I [Leishmania infantum JPCM5]
Length = 667
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 187/406 (46%), Gaps = 49/406 (12%)
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSE-IHYFSRSFLD 276
I G V+PQLA +L GK+ E K+DG+R QIH + + H FSR+
Sbjct: 288 IRPGLPVKPQLAYPTSSITVILDRLQGKKFTSEYKYDGERAQIHYDKDKGFHIFSRNSET 347
Query: 277 HS-EYGHAMSKI--IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD 333
H+ +Y +S + + V V ILD E++ F Q + R ++ +
Sbjct: 348 HTGKYPDVISMLPKVFDPVEVQSFILDSEVVAVHPETGALQAF---QVLQHRGRKNIAEE 404
Query: 334 R---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQ 390
+C F FD+LY ++++L++R ELL + + P +L
Sbjct: 405 DVSIPVCVFVFDILYFNGEPQLNKTLQQRRELLWRCIHPLPAKLSF-------------- 450
Query: 391 GEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA 448
L + V++++ F + +I + EG+++K L + + P RS WLKLK +Y+
Sbjct: 451 ---ATYLDSDKVEDMQTFLERSIADGCEGLMVKTLDEEANYTPAKRSHYWLKLKKDYMDG 507
Query: 449 GSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA 507
+D LD++ I ++G G+R G FL+A + P D Y S C++GTG DEEL+
Sbjct: 508 VTDTLDLVPIAAFHGKGKRTGVFGGFLLACYD-PKADEYQ----SICKIGTGFQDEELEK 562
Query: 508 VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIR 563
+ LKP+ + P +Y+ E PDVW+ + K+ LS++ +
Sbjct: 563 LTQSLKPFVVDDK------PRYYRAGG---EEPDVWLTEAQVWEVKAADLSVSPVHQAAV 613
Query: 564 SEV-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 608
V S +LRFPR R R DK D + Q ++ + + Q
Sbjct: 614 GLVDPSKGIALRFPRYLRQREDKKPADATNAQQVADMYKAQSLAVQ 659
>gi|328871756|gb|EGG20126.1| DNA ligase I [Dictyostelium fasciculatum]
Length = 929
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 185/403 (45%), Gaps = 67/403 (16%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-KNGSEIHYFSRSFLDHS- 278
G V+P LA + E E K+DG+R QIH +I ++R+ D++
Sbjct: 554 GIPVKPMLAQPTTGITQVLDRFQEMEFTCEFKYDGERAQIHLTEDGKISIYTRNLEDYTG 613
Query: 279 EYGHAMSKI---IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR- 334
+Y ++ + I + V ILD E + +D + N+ F Q ++ R G+S D+
Sbjct: 614 KYPDIIANVKRFIGEGV--TSFILDCEAVAYDPTNNKILSF---QILSSRPRKGVSLDQI 668
Query: 335 --QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGE 392
+C FAFD+LY+ S+I + +R E+L K + G L + ++++
Sbjct: 669 KIPVCVFAFDLLYLNGKSLIDEPFYKRREVLYANFKETPGALT-----YAKHANI----- 718
Query: 393 PCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGS 450
+V++++ + +E I+ EG+++K L S +EP RS WLK+K +Y+ +
Sbjct: 719 -------SDVNDIQLYLQEAIDGNCEGLMVKTLKEQSIYEPSKRSYNWLKIKKDYMAGMT 771
Query: 451 D-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV 509
D +DV+ IG +YG G+R G +L+A + D F + C++GTG SDE+L
Sbjct: 772 DSVDVVPIGAWYGKGKRTGVYGAYLLACYDDDNED-----FQTLCKIGTGFSDEQLKEFT 826
Query: 510 TKLKPYFRKYEYPKRAPPSFYQVTNNSKE--------RPDVWIESPEKSIILSITSDIRT 561
L P QVTN+ K +PDVW + +L+ I
Sbjct: 827 EILAP----------------QVTNSCKNTYIVSDNLKPDVWFNPSQVWEVLAADLSISP 870
Query: 562 IRSEVF-----SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
I + + +LRFPR ++R DK D V++
Sbjct: 871 IHTAAVGVLDPNKGIALRFPRFIQIRKDKNPEDATTASQIVDM 913
>gi|281348405|gb|EFB23989.1| hypothetical protein PANDA_006333 [Ailuropoda melanoleuca]
Length = 909
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 133/510 (26%), Positives = 218/510 (42%), Gaps = 95/510 (18%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RLA S + A+K+ V+ L E ++I + L+LG++E+S+
Sbjct: 401 IARLAGSASTAKKMDVIKGLFVACRHSEARYIARALSGRLRLGLAEQSVLAALSQAVSLT 460
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 461 PPGQEFPPAVVDAGKGRTAEARKTWLEEQAMILKQTFCEVPDLDRIIPVLLEHGLERLPE 520
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 521 HCK--LSPGVPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHVLEGGEVKIFS 578
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 579 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 638
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 639 AEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 679
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL + D++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 680 EGEFVFATSLDTKDTDQIAEFLEQSVKDSCEGLMVKTLDVNATYEIAKRSHNWLKLKKDY 739
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A A D + C++GTG SDEE
Sbjct: 740 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEE 794
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ KL+ P R Y V + PD W++ K LS++
Sbjct: 795 LEEHHRKLQALVLPTPRPY------------VRADGAVAPDHWLDPSAVWEVKCADLSLS 842
Query: 557 SDIRTIRSEV-FSAPYSLRFPRIDRVRYDK 585
R V SLRFPR R+R DK
Sbjct: 843 PIYPAARGLVDGEKGISLRFPRFIRIREDK 872
>gi|311257832|ref|XP_003127315.1| PREDICTED: DNA ligase 1 [Sus scrofa]
Length = 921
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 134/506 (26%), Positives = 220/506 (43%), Gaps = 87/506 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ +LA S + A+K+ ++ L E ++I + L+LG++E+S+
Sbjct: 413 IAQLAGSASTAKKMEIIKGLFVACRHSEARFIARALSGRLRLGLAEQSVLAALAQAASLT 472
Query: 183 ---HEFHPDAED--------------------LFNVTCDLK-------LVCEKLKDRNQR 212
EF P D L C++ ++ E +R
Sbjct: 473 PPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIVPVLLEHGLERLPE 532
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H R + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 533 HCR--LSPGVPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHVLEGGEVKIFS 590
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ Y +S+I + + V ILD E + WD + F + D
Sbjct: 591 RNQEDNTGRYPDIISRIPKIKLPSVTSFILDAEAVAWDREKKQIQPFQVLTTRKRKEVDA 650
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 651 AEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 691
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL + D++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 692 EGEFVFATSLDTKDTDQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 751
Query: 446 IRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ SD LD+++IG Y G G+R G FL+A + D + C++GTG SDEE
Sbjct: 752 LDGVSDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEESEELQAICKLGTGFSDEE 806
Query: 505 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIR 560
L+A L+ AP S+ V + PD W++ K LS++
Sbjct: 807 LEAHHQSLQALVLP------APRSY--VRADGAVAPDHWLDPSAVWEVKCADLSLSPIYP 858
Query: 561 TIRSEVFSAP-YSLRFPRIDRVRYDK 585
R V S SLRFPR RVR DK
Sbjct: 859 AARGLVDSEKGISLRFPRFIRVRDDK 884
>gi|118387305|ref|XP_001026764.1| DNA ligase I, ATP-dependent [Tetrahymena thermophila]
gi|89308531|gb|EAS06519.1| DNA ligase I, ATP-dependent [Tetrahymena thermophila SB210]
Length = 635
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 147/544 (27%), Positives = 251/544 (46%), Gaps = 75/544 (13%)
Query: 103 GNFPMVAAEVLQRR------QGMISGGLTIKELNDLLDRLASSE---NRAEKISVLSTLI 153
G+ + A E+L+++ L+I E+ ++L + + +R EK ++ +
Sbjct: 117 GDIGLYAKEMLEKKLEKEGNNRTEKNHLSILEVTSFFEKLKNLQGDRSRLEKQELIIDFL 176
Query: 154 KKT-NAQEMKWIIMIILKDLKLGISEKSIFHEF-HPDAEDLFNVTCDLKLVCEKLKDRNQ 211
KK + E+++ I I+ K L++G+SEKSI + + + ++ LK V +K+ N
Sbjct: 177 KKIQDPLEIQYFIRILSKSLRIGVSEKSIIKALTNINKKKKNSLDSLLKNVQDKIFGYNT 236
Query: 212 RHKRQDIEVGKAVRPQLAMRIGDAHAA---WRKLHGKEVVIECKFDGDRIQIHKNGSE-I 267
DI++G V P LA + D +K K+V +E K+DG+R Q+H + I
Sbjct: 237 AL-HTDIQIGTPVPPMLAKPVSDFDELLKFLKKYESKKVSLELKYDGERCQVHYGKKKGI 295
Query: 268 HYFSRSF-LDHSEYG---HAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIA 323
FSR+ + + +Y + K ++N V+ CILDGE++V D+ N F Q+
Sbjct: 296 KLFSRNLEIQNEKYPQLVQQLEKYFQKNNSVEDCILDGEIVVTDSKGN-IKSFQEQQQNR 354
Query: 324 KAARD-----GLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLV 378
K +D D + FD+L++ + Q+ KE +L +K + ++
Sbjct: 355 KRKQDSNKVVAFDEDNIEKIYLFDILFL---NACEQNTKE--QLYRKSL------IKENF 403
Query: 379 PDHGLNSHVRPQGEPCWSL-VAHNVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRS 435
P G +H + + L + + DE++K K+ I+ ++EG ++K L S ++ R+
Sbjct: 404 PIEGPVNHAESK---IFDLSIQKDFDELKKLVKQYIDQKEEGAMVKSLDSNTFYDNNGRT 460
Query: 436 GKWLKLKPEYIRAG--SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISF 493
+W KLK + + G DV+ I YYG G+R G +L+A D + +++
Sbjct: 461 -QWAKLKKQVLSGGLADTFDVIPIAAYYGKGKRSGVYGSYLLA-----CYDDKKKEYVAL 514
Query: 494 CRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIIL 553
C++GTG SD+ L +LK + P Y V K PDVW + + +
Sbjct: 515 CKIGTGFSDQFLQDSTDRLK------QKVCSQKPKEYSVHRTFK--PDVWFQKDAE--VW 564
Query: 554 SITSD------IRTIRSEVFS-APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGT 606
+ SD I TI +S SLRFPR RVR DK + +N
Sbjct: 565 EVESDSLSSSPIYTIGKMNYSDNGISLRFPRFLRVRDDKTTEQSTK-------TYQNNSK 617
Query: 607 TQKG 610
QKG
Sbjct: 618 DQKG 621
>gi|255073103|ref|XP_002500226.1| predicted protein [Micromonas sp. RCC299]
gi|226515488|gb|ACO61484.1| predicted protein [Micromonas sp. RCC299]
Length = 676
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 195/422 (46%), Gaps = 48/422 (11%)
Query: 210 NQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEI 267
++ H R G V+P LA ++ E E K+DG+R QIH ++G+ +
Sbjct: 290 DKLHSRCHFRPGVPVKPMLAKPTCGVSEVLQRFSDVEFTCEYKYDGERAQIHLLEDGT-V 348
Query: 268 HYFSRSFLDHS----EYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIA 323
FSR+ D++ + A+ ++ V ++DGE + +D ++ F
Sbjct: 349 KIFSRNQEDNTPKFPDVIRALPSYLKAGV--KSVVIDGEAVAYDREQHKILPFQILSTRG 406
Query: 324 KAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGL 383
+ D +C +AFD LY+ +++ +SL ER E + K VPD
Sbjct: 407 RKNIDEADIKVNVCIYAFDCLYLNGETLLQKSLTERREAMYSAFKE--------VPDEFY 458
Query: 384 NSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKP 443
C + ++ +V+E++ F +++I + EG+++K + + +EP RS WLKLK
Sbjct: 459 F---------CTAKISRDVEELQVFLEDSIADNTEGLIVKTMDATYEPSKRSLNWLKLKK 509
Query: 444 EYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSD 502
+Y+ G LD++ IG ++G G+R G +L+A D S C++GTG SD
Sbjct: 510 DYLEGCGDSLDLVPIGAFHGRGKRTGVYGAYLLACY-----DEESEELQSICKIGTGFSD 564
Query: 503 EELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSD 558
E+L + L+P + AP S+++ N+ + DVW + + K+ LSI+
Sbjct: 565 EQLVELTEGLRPTVIE------APRSYFKYDANAM-KCDVWFDPSQVWEVKAADLSISPV 617
Query: 559 IRTIRSEVFSAP-YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQ 617
+ V +LRFPR R R DK + + + +++ T Q E+ G
Sbjct: 618 HQAGHGLVDPVKGIALRFPRFLRKRDDKNVEQATNSEQVADF-YNAQATKQ---EFAGGD 673
Query: 618 DD 619
DD
Sbjct: 674 DD 675
>gi|403299143|ref|XP_003940349.1| PREDICTED: DNA ligase 1-like isoform 3 [Saimiri boliviensis
boliviensis]
Length = 887
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 138/541 (25%), Positives = 227/541 (41%), Gaps = 96/541 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 378 IARLTGSASTAKKIDIIKALFVACRHSEARYIARSLSGRLRLGLAEQSVLAALSQAVSLT 437
Query: 183 ---HEFHPDAED--------------------LFNVTCDLK-------LVCEKLKDRNQR 212
EF P D L C++ ++ E +R
Sbjct: 438 PPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIVPVLLEHGLERLPE 497
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA + ++ E K+DG R QIH E+ FS
Sbjct: 498 HCK--LSPGIPLKPMLAHPTRGINEVLKRFEEAAFTCEYKYDGQRAQIHALESGEVKIFS 555
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + V ILD E + WD + F + D
Sbjct: 556 RNQEDNTGKYPDIISRIPRIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 615
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 616 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 656
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +V+++ +F ++++++ EG++LK D+ + +E RS WLK+K +Y
Sbjct: 657 EGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMLKTLDVDATYEIAKRSHNWLKMKKDY 716
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A E + + C++GTG SD+E
Sbjct: 717 LSGVGDTLDLVVIGAYLGRGKRAGRYGGFLLACYEEDS-----EELQAICKLGTGFSDDE 771
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+A L+ P R Y V + PD W++ K LS++
Sbjct: 772 LEAHHQSLQALVLPSPRPY------------VRTDDAVTPDHWLDPSAVWEVKCADLSLS 819
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G+E
Sbjct: 820 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEEDT 879
Query: 615 G 615
G
Sbjct: 880 G 880
>gi|403299139|ref|XP_003940347.1| PREDICTED: DNA ligase 1-like isoform 1 [Saimiri boliviensis
boliviensis]
Length = 918
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 138/541 (25%), Positives = 227/541 (41%), Gaps = 96/541 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 409 IARLTGSASTAKKIDIIKALFVACRHSEARYIARSLSGRLRLGLAEQSVLAALSQAVSLT 468
Query: 183 ---HEFHPDAED--------------------LFNVTCDLK-------LVCEKLKDRNQR 212
EF P D L C++ ++ E +R
Sbjct: 469 PPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIVPVLLEHGLERLPE 528
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA + ++ E K+DG R QIH E+ FS
Sbjct: 529 HCK--LSPGIPLKPMLAHPTRGINEVLKRFEEAAFTCEYKYDGQRAQIHALESGEVKIFS 586
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + V ILD E + WD + F + D
Sbjct: 587 RNQEDNTGKYPDIISRIPRIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 646
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 647 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 687
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +V+++ +F ++++++ EG++LK D+ + +E RS WLK+K +Y
Sbjct: 688 EGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMLKTLDVDATYEIAKRSHNWLKMKKDY 747
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A E + + C++GTG SD+E
Sbjct: 748 LSGVGDTLDLVVIGAYLGRGKRAGRYGGFLLACYEEDS-----EELQAICKLGTGFSDDE 802
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+A L+ P R Y V + PD W++ K LS++
Sbjct: 803 LEAHHQSLQALVLPSPRPY------------VRTDDAVTPDHWLDPSAVWEVKCADLSLS 850
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G+E
Sbjct: 851 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEEDT 910
Query: 615 G 615
G
Sbjct: 911 G 911
>gi|410221310|gb|JAA07874.1| ligase I, DNA, ATP-dependent [Pan troglodytes]
gi|410251416|gb|JAA13675.1| ligase I, DNA, ATP-dependent [Pan troglodytes]
gi|410288274|gb|JAA22737.1| ligase I, DNA, ATP-dependent [Pan troglodytes]
gi|410353221|gb|JAA43214.1| ligase I, DNA, ATP-dependent [Pan troglodytes]
Length = 919
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 141/545 (25%), Positives = 229/545 (42%), Gaps = 96/545 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 411 IARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLT 470
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 471 PPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPE 530
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 531 HCK--LSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFS 588
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 589 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 648
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 649 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 689
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 690 EGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 749
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + D + C++GTG SDEE
Sbjct: 750 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEE 804
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
LD LK P R Y V + PD W++ K LS++
Sbjct: 805 LDEHHQSLKALVLPSPRPY------------VRIDGAVIPDHWLDPSAVWEVKCADLSLS 852
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G++ G
Sbjct: 853 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSG 912
Query: 615 GLQDD 619
+D
Sbjct: 913 SDPED 917
>gi|307187908|gb|EFN72821.1| DNA ligase 1 [Camponotus floridanus]
Length = 870
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 186/421 (44%), Gaps = 63/421 (14%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-KNGSEIHYFSRSFLDH-S 278
G ++P LA + G + E K+DG+R QIH + I+ +SR+ ++ S
Sbjct: 489 GIPLKPMLAHPTKGIQEVLTRFEGLKFTCEWKYDGERAQIHVADNGHINIYSRNQENNTS 548
Query: 279 EYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR-DGLSSD--R 334
+Y + + + LV CILD E + WD + F Q ++ R D D
Sbjct: 549 KYPDIIKRFKNTRGDLVKNCILDCEAVAWDNEQKQILPF---QVLSTRKRKDANEKDIKV 605
Query: 335 QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPC 394
Q+C F FD+LY+ D ++ +S +R ELL++ K +G +
Sbjct: 606 QVCVFMFDLLYLNDEPLVKESFAKRRELLKQHFKEIEGEWKF-----------------A 648
Query: 395 WSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSD 451
S+ ++EV+ F E+++ EG+++K L + +E RS WLKLK +Y+ G
Sbjct: 649 NSMDTTTMEEVQIFLDESVKGNCEGLMVKTLEEEATYEIAKRSRNWLKLKKDYLDGVGDT 708
Query: 452 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL------ 505
LDV++IGGY G G+R G FL+A D + S C++GTG +E+L
Sbjct: 709 LDVVVIGGYIGKGKRTGTYGGFLLACY-----DQENEEYQSICKIGTGFKEEDLENHTKF 763
Query: 506 --DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDI 559
D V+++ K Y+R +S PD W E + K LS++
Sbjct: 764 FKDHVISQTKSYYR----------------FDSSHEPDHWFEPVQVWEIKCADLSLSPVH 807
Query: 560 RTIRSEVFSAP-YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQD 618
R V SLRFPR R+R DK + Q ++ ++ K ++
Sbjct: 808 RAAIGIVDPEKGISLRFPRFIRIREDKNCEEATSAQQVADMYNNQEQIKNKTSASKATEE 867
Query: 619 D 619
D
Sbjct: 868 D 868
>gi|403299141|ref|XP_003940348.1| PREDICTED: DNA ligase 1-like isoform 2 [Saimiri boliviensis
boliviensis]
Length = 850
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 138/541 (25%), Positives = 227/541 (41%), Gaps = 96/541 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 341 IARLTGSASTAKKIDIIKALFVACRHSEARYIARSLSGRLRLGLAEQSVLAALSQAVSLT 400
Query: 183 ---HEFHPDAED--------------------LFNVTCDLK-------LVCEKLKDRNQR 212
EF P D L C++ ++ E +R
Sbjct: 401 PPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIVPVLLEHGLERLPE 460
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA + ++ E K+DG R QIH E+ FS
Sbjct: 461 HCK--LSPGIPLKPMLAHPTRGINEVLKRFEEAAFTCEYKYDGQRAQIHALESGEVKIFS 518
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + V ILD E + WD + F + D
Sbjct: 519 RNQEDNTGKYPDIISRIPRIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 578
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 579 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 619
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +V+++ +F ++++++ EG++LK D+ + +E RS WLK+K +Y
Sbjct: 620 EGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMLKTLDVDATYEIAKRSHNWLKMKKDY 679
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A E + + C++GTG SD+E
Sbjct: 680 LSGVGDTLDLVVIGAYLGRGKRAGRYGGFLLACYEEDS-----EELQAICKLGTGFSDDE 734
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+A L+ P R Y V + PD W++ K LS++
Sbjct: 735 LEAHHQSLQALVLPSPRPY------------VRTDDAVTPDHWLDPSAVWEVKCADLSLS 782
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G+E
Sbjct: 783 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEEDT 842
Query: 615 G 615
G
Sbjct: 843 G 843
>gi|322697185|gb|EFY88968.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Metarhizium
acridum CQMa 102]
Length = 899
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 133/518 (25%), Positives = 220/518 (42%), Gaps = 96/518 (18%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH-----PDAEDLFNVTCDLK 200
K E K+II + L+LG++E+++ HE P D+ N LK
Sbjct: 402 KGGPSEAKYIIRFLEGKLRLGLAERTVLVSLAQAIVCHEAEQKGKVPSTTDMENGESILK 461
Query: 201 LVCEKLKDRN------------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVV 248
V +L + + + + G ++P LA + G++
Sbjct: 462 TVYSELPSYDAIIPAVLSHGIMKLRECCKLRPGVPLKPMLAKPTKAITEVLDRFEGQKFT 521
Query: 249 IECKFDGDRIQIH----KNGSEIH----------------YFSRSFLDHSE-YGHAMSKI 287
E K+DG+R QIH +G E+ FSR+ D S+ Y ++K+
Sbjct: 522 CEYKYDGERAQIHYVARDSGQELSRETSGAAKQAAGGVASIFSRNSEDLSKKYPDILAKL 581
Query: 288 ---IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFD 342
++ + +LD E + WD S + F Q + + +D D ++ C FAFD
Sbjct: 582 HSWVKNDT--KSFVLDCETVAWDVSEKKVLPF--QQLMTRKKKDVKLEDVKVKVCVFAFD 637
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
+LY+ V+ +SL+ER ELLQ+ P +G G +
Sbjct: 638 LLYLNGLPVVEKSLRERRELLQQSFAPVEGEFSFATYMDG-----------------QEL 680
Query: 403 DEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIG 458
DE++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G
Sbjct: 681 DEIQLFLDESVKASCEGLMVKMLDGTESGYEPSKRSRNWLKVKKDYLAGVGDSLDLVVLG 740
Query: 459 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 518
Y+G G+R FL+A PA DTY + C +GTG S++ L+ + +L
Sbjct: 741 AYHGRGKRTSVYGAFLLACY-NPANDTYE----TVCNIGTGFSEQVLEELHAQLS----- 790
Query: 519 YEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP---- 570
E P FY + + +PDVW E K+ L+++ + E
Sbjct: 791 -EIVIDRPKPFYSHSAGGQHQPDVWFEPRYVWEVKTADLTLSPRYKAGCKEGVDPAGDKG 849
Query: 571 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 608
SLRFPR ++R DK + + E+ T+
Sbjct: 850 ISLRFPRFIKIRDDKRPDEATSSRQIAEMYRKQESVTK 887
>gi|402906130|ref|XP_003915857.1| PREDICTED: DNA ligase 1 isoform 2 [Papio anubis]
Length = 851
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 140/545 (25%), Positives = 229/545 (42%), Gaps = 96/545 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 343 IARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLT 402
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 403 PPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPE 462
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 463 HCK--LSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFS 520
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 521 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 580
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 581 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 621
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 622 EGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 681
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + D + C++GTG SDEE
Sbjct: 682 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEE 736
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ LK P R Y V + PD W++ K LS++
Sbjct: 737 LEEHHQSLKALVLPSPRPY------------VRIDGAVTPDHWLDPSAVWEVKCADLSLS 784
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G++ G
Sbjct: 785 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSG 844
Query: 615 GLQDD 619
+D
Sbjct: 845 SDPED 849
>gi|115443382|ref|XP_001218498.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Aspergillus
terreus NIH2624]
gi|114188367|gb|EAU30067.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Aspergillus
terreus NIH2624]
Length = 873
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 131/528 (24%), Positives = 223/528 (42%), Gaps = 93/528 (17%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH------PDAEDLFNVTCDL 199
K E K+I+ + L+LG++EK++ HE P AE + L
Sbjct: 373 KGGPSEAKFIVRFLEGKLRLGLAEKTVLVALAQAVVAHEAALKGEKTPSAEKMAQGEAVL 432
Query: 200 KLVCEKLKDRN------------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEV 247
K V +L K ++ G ++P LA + GK+
Sbjct: 433 KTVYSELPAYEVIIPAMLEHGLFNLGKVCKLQPGIPIKPMLAKPTKSITEVLDRFEGKDF 492
Query: 248 VIECKFDGDRIQIHK-NGSEIHYFSRSFLDHSEYGHAMSKIIEQN----------VL--- 293
E K+DG+R QIH + IH F + ++ + I +N V+
Sbjct: 493 TCEYKYDGERAQIHYVSPDSIHEFPGATATLNQDTKGLCAIFSRNSEDLSKKYPDVMGKL 552
Query: 294 -------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVL 344
V +LD E + WDT + F Q + + +D + D ++ C FAFD+L
Sbjct: 553 EGWVKDGVKSFVLDCETVAWDTVNKKVLPF--QQLMTRKRKDVKAEDVKVKVCVFAFDLL 610
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
++ + +SL+ER ELL + + +G + G N++V +DE
Sbjct: 611 FLNGEPTVKKSLRERRELLHESFQVVEGEFQ--FAQFG-NTNV--------------LDE 653
Query: 405 VEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 460
++ +E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G Y
Sbjct: 654 IQNLLEESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLSGVGDSLDLVVLGAY 713
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
+G G+R FL+A A + + + + C +GTG S+ +L+ + +L P
Sbjct: 714 HGRGKRTSVYGAFLLA-----AYNASTQTYETICNIGTGFSEADLEELHKELSPLVI--- 765
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP-----Y 571
RA P FY + K++PDVW E K+ L+++ + E
Sbjct: 766 --DRAKP-FYSHSTVPKDQPDVWFEPRLVWEVKTADLTLSPRYKAAADEFMGTTGGTKGV 822
Query: 572 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
SLRFPR + R DK ++ E+ ++ G+ DD
Sbjct: 823 SLRFPRFIKRRDDKKPEQATTTRAVAEMYRKQEAVAKENVGKKGVDDD 870
>gi|298674833|ref|YP_003726583.1| ATP-dependent DNA ligase I [Methanohalobium evestigatum Z-7303]
gi|298287821|gb|ADI73787.1| DNA ligase I, ATP-dependent Dnl1 [Methanohalobium evestigatum
Z-7303]
Length = 569
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 140/550 (25%), Positives = 245/550 (44%), Gaps = 95/550 (17%)
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISG- 122
G+ ES+L L A G+S D + + R G + G + A L R Q S
Sbjct: 60 GIGESLLYTALSKASGLSVDDIENI----IRDTG---DIGETAVRALSKLSRNQVTFSSF 112
Query: 123 ------GLTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNAQEMKWIIMIILKDLK 173
+TI E++D L R+A+ + +K+ L L ++ +E +++ + +++L+
Sbjct: 113 VEEPTPQITILEVSDRLKRIANVSGKGSQNQKVKNLQYLFNASSPEEARYLSRLAVEELR 172
Query: 174 LGISE----KSIFHEFHPDAEDL---FNVTCDLKLVCEKLKDRNQRH-KRQDIEVGKAVR 225
+G+ E +I F+ E L F +T DL V + + + DI+V + VR
Sbjct: 173 IGVGEGIVRDAISKAFNVPVEKLERSFMLTNDLGAVAVAAQQGGEEEVSKLDIQVNRPVR 232
Query: 226 PQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMS 285
LA A+ ++ IE KFDG R+QIHK+ E++ FSR + + +
Sbjct: 233 MMLAQVTPSIETAFNEMG--TAAIEWKFDGARVQIHKDKEEVNIFSRKLENVTNSLPDIV 290
Query: 286 KIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR---DGLSSDRQLCYF--A 340
+ ++ + D I+DGE + D R F Q+I + R D LS+ +++
Sbjct: 291 ESVKNQLNADTAIIDGEAVAIDED-GRPRAF---QDILRRFRRKYDVLSTSKEIPIILNM 346
Query: 341 FDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAH 400
FD++Y+ S I LK R E+L +V+ +K + V Q ++
Sbjct: 347 FDLMYLDGESYIDLPLKYRREILGNIVENTK------------SIKVDKQ------ILTS 388
Query: 401 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGY 460
+V+E + + + EGI++K+ S + PG R WLK KP LD+++IGG
Sbjct: 389 DVEEANRVYNNALSAGHEGIMIKNPESPYSPGKRGKNWLKKKP----IMETLDLVVIGGE 444
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF---- 516
+G GRR + + +A +R +++ +V TG++DE+L+ + +
Sbjct: 445 WGYGRRANLIGSYAIACYDRDRG-----QYLPIGKVATGITDEKLEELTSLFSDLIVSEK 499
Query: 517 -RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 575
RK E+ +P++ E + I +S + + Y+LRF
Sbjct: 500 GRKIEF-----------------KPEIVFEIGFEEI----------QKSNNYESGYALRF 532
Query: 576 PRIDRVRYDK 585
PR+ VR DK
Sbjct: 533 PRLVNVRDDK 542
>gi|355699355|gb|AES01100.1| ligase I, DNA, ATP-dependent [Mustela putorius furo]
Length = 919
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 217/508 (42%), Gaps = 91/508 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RLA S + A+K+ V+ L E ++I + L+LG++E+S+
Sbjct: 412 IARLAGSASTAKKMDVIKGLFVACRHSEARYIARALSGRLRLGLAEQSVLAALAQAVSLT 471
Query: 183 ---HEFHPDAED-----------------------LFNVTCDLKLVCEKLKDRNQRHKRQ 216
EF P D F DL + L + H +
Sbjct: 472 PPGQEFPPGIVDAGKGRTAEARKMWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLEHLPE 531
Query: 217 DIEV--GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRS 273
++ G ++P LA ++ E K+DG R QIH G E+ FSR+
Sbjct: 532 HCKLSPGVPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHVLEGGEVKIFSRN 591
Query: 274 FLDH-SEYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS 331
D+ S+Y +S+I + + V ILD E + WD + F + D
Sbjct: 592 QEDNTSKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDAAE 651
Query: 332 SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
Q+C +AFD++Y+ S++ + L R +LL++ + V+ +G
Sbjct: 652 IQVQVCLYAFDLIYLNGQSLVREPLSRRRQLLRE-------------------NFVQTEG 692
Query: 392 EPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIR 447
E + SL + +++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+
Sbjct: 693 EFVFATSLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLD 752
Query: 448 A-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 506
G LD+++IG Y G G+R G FL+A A D + C++GTG SDEEL+
Sbjct: 753 GVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEELE 807
Query: 507 AVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSD 558
+L+ P R Y V + PD W++ K LS++
Sbjct: 808 EHHHRLQALVLPSPRPY------------VRVDGAVAPDHWLDPSAVWEVKCADLSLSPI 855
Query: 559 IRTIRSEV-FSAPYSLRFPRIDRVRYDK 585
R V SLRFPR RVR DK
Sbjct: 856 YPAARGLVDGEKGISLRFPRFIRVREDK 883
>gi|322709388|gb|EFZ00964.1| DNA ligase [Metarhizium anisopliae ARSEF 23]
Length = 886
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 134/518 (25%), Positives = 222/518 (42%), Gaps = 96/518 (18%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH-----PDAEDLFNVTCDLK 200
K E K+II + L+LG++E+++ HE P D+ N LK
Sbjct: 389 KGGPSEAKFIIRFLEGKLRLGLAERTVLVSLAQAIVCHEAEQKGKVPSTTDMENGESILK 448
Query: 201 LVCEKLKDRNQ------RHKRQDIE------VGKAVRPQLAMRIGDAHAAWRKLHGKEVV 248
V +L + H ++ G ++P LA + G++
Sbjct: 449 TVYSELPSYDAIIPAVLSHGIMNLRECCKLRPGVPLKPMLAKPTKAITEVLDRFEGQKFT 508
Query: 249 IECKFDGDRIQIH------------------KNGSE--IHYFSRSFLDHSE-YGHAMSKI 287
E K+DG+R QIH K ++ FSR+ D S+ Y ++K+
Sbjct: 509 CEYKYDGERAQIHYVARDSDQELSQETSGAAKQAADGVASIFSRNSEDLSKKYPDILAKL 568
Query: 288 ---IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFD 342
++ + +LD E + WD S + F Q + + +D D ++ C FAFD
Sbjct: 569 HTWVKNDT--KSFVLDCETVAWDVSEKKVLPF--QQLMTRKKKDVKLEDVKVKVCVFAFD 624
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
+LY+ V+ +SL+ER ELLQ+ P +G +++ Q +
Sbjct: 625 LLYLNGLPVVEKSLRERRELLQQSFAPVEGEF-------AFATYMDGQ----------EL 667
Query: 403 DEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIG 458
DE++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G
Sbjct: 668 DEIQLFLDESVKASCEGLMVKMLDGTESGYEPSKRSRNWLKVKKDYLAGVGDSLDLVVLG 727
Query: 459 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 518
YYG G+R FL+A PA DTY + C +GTG S++ L+ + +L
Sbjct: 728 AYYGRGKRTSVYGAFLLACY-NPANDTYE----TVCNIGTGFSEQVLEELHAQLS----- 777
Query: 519 YEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP---- 570
E P FY + + +PDVW E K+ L+++ + E
Sbjct: 778 -EIVIDRPKPFYSHSAGGQHQPDVWFEPRYVWEVKTADLTLSPRYKAGCKEGVDPAGDKG 836
Query: 571 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 608
SLRFPR ++R DK + + E+ T+
Sbjct: 837 ISLRFPRFIKIRDDKKPDEATSSRQIAEMYRKQESVTK 874
>gi|121698847|ref|XP_001267826.1| DNA ligase Cdc9, putative [Aspergillus clavatus NRRL 1]
gi|119395968|gb|EAW06400.1| DNA ligase Cdc9, putative [Aspergillus clavatus NRRL 1]
Length = 879
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 144/602 (23%), Positives = 253/602 (42%), Gaps = 117/602 (19%)
Query: 103 GNFPMVAAEVLQRRQGMISGG-LTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNA 158
G+ +VAA+ + M LT++ +++ L +A + + +KIS + L+ +A
Sbjct: 307 GDLGLVAAKSRSNQPTMFKPKPLTVRGVHEGLLAIAKIQGQGSQEKKISAIKKLLSAADA 366
Query: 159 ----------------QEMKWIIMIILKDLKLGISEKSIF---------HEFH------P 187
E K+I+ + L+LG++EK++ HE P
Sbjct: 367 ATVGKGVDITKDKGGPSEAKFIVRFLEGKLRLGLAEKTVLVALAQAVVAHEAAVKGEKLP 426
Query: 188 DAEDLFNVTCDLKLVCEKLKDRN------QRHKRQDI------EVGKAVRPQLAMRIGDA 235
E + LK V +L H D+ + G ++P LA
Sbjct: 427 TPEKMAQGEAVLKTVYSELPAYEVIIPAMLEHGLLDLPKVCKLQPGVPIKPMLAKPTKSI 486
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEI--HY-----------------FSRSFLD 276
+ GK+ E K+DG+R QIH + HY FSR+ D
Sbjct: 487 TEVLNRFEGKDFTCEYKYDGERAQIHYVAPDAIKHYPGATATLQRDSKGLSAIFSRNSED 546
Query: 277 HSE-YGHAMSKIIEQNVLVDRC---ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSS 332
S+ Y ++K+ N + D +LD E + WD + F Q + + +D +
Sbjct: 547 LSKKYPDVLAKL--DNWVKDGVKSFVLDCETVAWDMENKKVLPF--QQLMTRKRKDVKAE 602
Query: 333 DRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQ 390
D ++ C FAFD+L++ + + +SL++R ELL S+G + HG
Sbjct: 603 DVKVKVCIFAFDLLFLNGEATVKKSLRDRRELLHSSFNVSEGEFQ--FAQHGDT------ 654
Query: 391 GEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIR 447
++++E++ ++++ EG+++K L S +EP RS WLK+K +Y+
Sbjct: 655 ---------NDLEEIQTLLDDSVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLA 705
Query: 448 A-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 506
G LD++++G Y+G G+R FL+A A ++ + + + C +GTG S+ L+
Sbjct: 706 GVGDSLDLVVLGAYHGRGKRTSVYGAFLLA-----AYNSSTQTYETVCNIGTGFSEAALE 760
Query: 507 AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTI 562
+L P + PK FY + K++PDVW E K+ L+++ +
Sbjct: 761 EFYQELSPL--TIDRPK----PFYSHSTVPKDQPDVWFEPRLVWEVKTADLTLSPRYKAA 814
Query: 563 RSEVFSAP-----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQ 617
E SLRFPR + R DK ++ E+ ++ GG+
Sbjct: 815 ADEFMGTAGGGKGVSLRFPRFIKSRDDKKPDQATTTRAVAEMYRKQEAVLKESSGKGGVD 874
Query: 618 DD 619
DD
Sbjct: 875 DD 876
>gi|90079511|dbj|BAE89435.1| unnamed protein product [Macaca fascicularis]
Length = 612
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 140/543 (25%), Positives = 228/543 (41%), Gaps = 96/543 (17%)
Query: 135 RLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF------------ 182
RL S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 106 RLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLTPP 165
Query: 183 -HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQRHK 214
EF P D L C+ + ++ E +R H
Sbjct: 166 GQEFPPAVVDAGKGRTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHC 225
Query: 215 RQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRS 273
+ + G ++P LA ++ E K+DG R QIH G E+ FSR+
Sbjct: 226 K--LSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRN 283
Query: 274 FLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS 331
D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 284 QEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASE 343
Query: 332 SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
Q+C +AFD++Y+ S++ + L R +LL++ + V +G
Sbjct: 344 IQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVETEG 384
Query: 392 EPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIR 447
E + SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+
Sbjct: 385 EFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLD 444
Query: 448 A-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 506
G LD+++IG Y G G+R G FL+A + D + C++GTG SDEEL+
Sbjct: 445 GVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELE 499
Query: 507 AVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSD 558
LK P R Y V + PD W++ K LS++
Sbjct: 500 EHHQSLKALVLPSPRPY------------VRIDGAVTPDHWLDPSAVWEVKCADLSLSPI 547
Query: 559 IRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGL 616
R V S SLRFPR RVR DK P Q S Q+G++ G
Sbjct: 548 YPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSD 607
Query: 617 QDD 619
+D
Sbjct: 608 PED 610
>gi|18312215|ref|NP_558882.1| ATP-dependent DNA ligase [Pyrobaculum aerophilum str. IM2]
gi|14423669|sp|O93723.2|DNLI_PYRAE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|18159655|gb|AAL63064.1| DNA ligase [Pyrobaculum aerophilum str. IM2]
Length = 584
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 145/568 (25%), Positives = 248/568 (43%), Gaps = 67/568 (11%)
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGG 123
G+ E + + A G + +A+ ++K G A + A+ +R G+++ G
Sbjct: 59 GVAEKLCLRAVSKATGAAVSELEAL----YKKTGDVGEAARRALAAS----KRPGLLAFG 110
Query: 124 ----LTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKDLKLGI 176
L + E+ D L ++A + K+++LS+L + +E K+I ++ L+LG+
Sbjct: 111 SQKPLEVSEVYDTLLKVARATGEGAQDMKVALLSSLFARATPEEGKYIARFVVGKLRLGV 170
Query: 177 SEKSIFHEFHPDA--------EDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQL 228
++ +I DA E +++ DL + + + + + + I G V P L
Sbjct: 171 ADMTIIEALS-DAYGVNKEALEKAYHIYPDLGRLAKHVAEGKPLDEIR-ITPGVPVLPML 228
Query: 229 AMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKII 288
A R+ A KL G + E K+DG+R QIH + FSR D + + K +
Sbjct: 229 AQRLSSASEILAKLGGS-AICEYKYDGERAQIHLTPGGVKIFSRRLEDITHAYPDVVKAV 287
Query: 289 EQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARD-GLSSDRQL---CYFAFDVL 344
++ V IL+GE++ D F QE+ R +++ +L + FDVL
Sbjct: 288 KEAVSAKEAILEGEIVAVDPDTGDMLPF---QELMHRKRKHDVATAVELYPTVLYLFDVL 344
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
YV + + L R + RL +V + S + W + N +
Sbjct: 345 YVDGEDLTEEPLIYR-----------RVRLSEIVCETDKVSIAK------WRIF-DNAEA 386
Query: 405 VEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGS 463
V+ FF E++ EG++ K S +E G R W+K K +Y D +D++++G ++G
Sbjct: 387 VDVFFHESVSMGTEGLICKSPSSIYEMGARGWNWIKYKRDYRSEMIDTVDLVVVGAFHGR 446
Query: 464 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
G+R G FL+A A P+ D F + C+VG+G +D +L + L+P ++ P
Sbjct: 447 GKRAGLYGAFLLA-AYDPSTDM----FYTVCKVGSGFTDADLKKMYEILQP----FKIPH 497
Query: 524 RAPPSFYQVTNNSKERPDVWIESPEKSIILSI--TSDIRTIRSEVFSAPYSLRFPRID-R 580
R P ++ + P V IE I LS T + +R V A +RFPR R
Sbjct: 498 RHPRVVSKMEADVWFVPQVVIEVIGAEITLSPLHTCCLGAVRPGVGLA---VRFPRFTGR 554
Query: 581 VRYDKPWHDCLDVQSFVELVHSSNGTTQ 608
R DK V +EL Q
Sbjct: 555 YRSDKSPEQATTVAEMLELYKRQKKVVQ 582
>gi|402906132|ref|XP_003915858.1| PREDICTED: DNA ligase 1 isoform 3 [Papio anubis]
Length = 888
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 140/545 (25%), Positives = 229/545 (42%), Gaps = 96/545 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 380 IARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLT 439
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 440 PPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPE 499
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 500 HCK--LSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFS 557
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 558 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 617
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 618 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 658
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 659 EGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 718
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + D + C++GTG SDEE
Sbjct: 719 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEE 773
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ LK P R Y V + PD W++ K LS++
Sbjct: 774 LEEHHQSLKALVLPSPRPY------------VRIDGAVTPDHWLDPSAVWEVKCADLSLS 821
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G++ G
Sbjct: 822 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSG 881
Query: 615 GLQDD 619
+D
Sbjct: 882 SDPED 886
>gi|428177538|gb|EKX46417.1| hypothetical protein GUITHDRAFT_157730 [Guillardia theta CCMP2712]
Length = 637
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 176/395 (44%), Gaps = 70/395 (17%)
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKN-GSEIHYFSRSFLD 276
++ G V P LA + + E K+DG+R QIH + FSR+ D
Sbjct: 263 LQPGIPVHPMLAHPTKGVSEVLDRFADQTFTCEYKYDGERGQIHMTPDGTVRIFSRNSED 322
Query: 277 H-SEYGHA---MSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSS 332
+ S+Y M K+I++ ILD E++ +D + F Q ++ R +
Sbjct: 323 NTSKYPDLIALMPKVIKEQT--KSFILDAEVVAYDRETKKILPF---QVLSTRKRKDANE 377
Query: 333 DR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
D Q+C FAFD+LY +I +S ER ELL+ +G
Sbjct: 378 DTITVQVCLFAFDILYYNGDPLIKRSFHERRELLKSTFTEVEGSFAF------------- 424
Query: 390 QGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYI 446
S A + +E+ F + + + EG+++K L S +EP RS KWLK+K +YI
Sbjct: 425 ----AKSRDASDTEEILAFLNDAVADSCEGLMVKTLFGDSSTYEPAQRSHKWLKVKKDYI 480
Query: 447 RAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL 505
+D LD++ IG ++G G+R G FL+A D F + C++GTG+SD
Sbjct: 481 DGMTDSLDLVPIGAFFGKGKRTGVYGAFLLACYNEETED-----FEAICKIGTGISD--- 532
Query: 506 DAVVTKLKPYFRKYE-YPKRAPPSFYQVTNNSKERPDVWIE--------------SPEKS 550
T+LK ++ +E P S+YQ ++ P+VW E SP+
Sbjct: 533 ----TQLKEFYDAFEPIIISEPKSYYQYDDSPGLLPNVWFEPKIVWEVAAADLSISPKHK 588
Query: 551 IILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
+ + + R I +LRFPR+ RVR DK
Sbjct: 589 AAIGLVDESRGI---------ALRFPRLVRVRDDK 614
>gi|258574125|ref|XP_002541244.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Uncinocarpus
reesii 1704]
gi|237901510|gb|EEP75911.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Uncinocarpus
reesii 1704]
Length = 941
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 134/538 (24%), Positives = 217/538 (40%), Gaps = 110/538 (20%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH------PDAEDLFNVTCDL 199
K E K+I+ + L+LG++E+++ HE P E L L
Sbjct: 438 KGGPSEAKYIVRFLEGKLRLGLAERTVLVALAHAMVSHEIEVKNGKAPSTEQLAKGEAIL 497
Query: 200 KLVCEKLKDRN------------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEV 247
K V +L + ++ G ++P LA + GK+
Sbjct: 498 KQVYSELPSYEVIIPAMLEHGLFNVQDKCKLQPGVPLKPMLAKPTKSISEVLDRFEGKDF 557
Query: 248 VIECKFDGDRIQIHKNGSEIHYFSR-SFLDHSEY-------GHAMSKIIEQNV------- 292
E K+DG+R QIH Y SR S D++ G + I +N
Sbjct: 558 TCEYKYDGERAQIH-------YVSRDSIKDYAATAGTLQKDGQGLCAIFSRNSEDLSKKY 610
Query: 293 --LVDRC-----------ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD--RQLC 337
++D+ ++D E + WD + F Q + + +D + D ++C
Sbjct: 611 PDVLDKLESWVKPGTKSFVVDCETVAWDLENKKVLPF--QQLMTRKRKDVKAEDIKVRVC 668
Query: 338 YFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSL 397
FAFD+L++ + +L+ER LL + P++G E +G S
Sbjct: 669 VFAFDILFLNGEPTVKMTLRERRSLLHETFIPTEG--EFAFAQYGNTS------------ 714
Query: 398 VAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLD 453
NV+E++ E++++ EG+++K L S +EP RS WLK+K +Y+ G LD
Sbjct: 715 ---NVEEIQNLLDESVKSSCEGLMVKMLDTDESGYEPSKRSRNWLKVKKDYLAGIGDSLD 771
Query: 454 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 513
+++IG Y+G G+R FL+A A P + Y + C +GTG S+ L+ + L
Sbjct: 772 LVVIGAYFGKGKRTSVYGAFLLA-AYNPNTENYE----TICNIGTGFSESLLEELHKTLS 826
Query: 514 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSA 569
P P FY ++ K++PDVW E K+ L+I+ R EV
Sbjct: 827 PLSISQPKP------FYSHSSVPKDQPDVWFEPRLVWEVKAADLTISPRYRCASDEVMGM 880
Query: 570 P--------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
SLRFPR + R DK + E+ T+ K DD
Sbjct: 881 TGTGADGKGVSLRFPRYIKSRDDKKPDQASTTRMVAEMYRKQESVTKDDKGKKAADDD 938
>gi|384940622|gb|AFI33916.1| DNA ligase 1 [Macaca mulatta]
Length = 919
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 140/545 (25%), Positives = 229/545 (42%), Gaps = 96/545 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 411 IARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLT 470
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 471 PPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPE 530
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 531 HCK--LSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFS 588
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 589 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 648
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 649 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 689
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 690 EGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 749
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + D + C++GTG SDEE
Sbjct: 750 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEE 804
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ LK P R Y V + PD W++ K LS++
Sbjct: 805 LEEHHQSLKALVLPSPRPY------------VRIDGAVTPDHWLDPSAVWEVKCADLSLS 852
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G++ G
Sbjct: 853 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSG 912
Query: 615 GLQDD 619
+D
Sbjct: 913 SDPED 917
>gi|444730652|gb|ELW71027.1| DNA ligase 1 [Tupaia chinensis]
Length = 960
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 219/506 (43%), Gaps = 87/506 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL+ + A K+ ++ L E ++I + L+LG++E+S+
Sbjct: 452 IARLSGGTSMARKVDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALAQAVSLT 511
Query: 183 ---HEFHPDAED--------------------LFNVTCDLK-------LVCEKLKDRNQR 212
EF P D L C++ ++ E +R
Sbjct: 512 PPGQEFPPAVVDAGKGKTAEARKTWLEKQGMILKQTFCEVPDLDRIVPVLLEHGLERLPE 571
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H R + G A++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 572 HCR--LSPGVALKPMLASPTRGISQVLKRFEEAAFTCEYKYDGQRAQIHMLEGGEVKIFS 629
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 630 RNQEDNTGKYPDIISRIPKIKLSSVTSFILDTEAVAWDQEKKQILPFQVLTTRKRKEVDA 689
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 690 SEIQVQVCVYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 730
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL + +++++F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 731 EGEFVFATSLDTKDTEQIDEFLEQSVKDSCEGLMVKTLDVNATYEIAKRSHNWLKLKKDY 790
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G+ FL+A + D + C++GTG D E
Sbjct: 791 LDGVGDTLDLVVIGAYLGRGKRAGQYGGFLLA-----SYDADTEELQAICKLGTGFCDRE 845
Query: 505 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIR 560
L+ L+ P S+ +V + PD W+E K LS++
Sbjct: 846 LEEQHENLQDLVLP------TPRSYVRVGGAAA--PDHWLEPRIVWEVKCADLSLSPIYP 897
Query: 561 TIRSEVFSAP-YSLRFPRIDRVRYDK 585
R V S SLRFPR RVRYDK
Sbjct: 898 AARGLVDSEKGISLRFPRFIRVRYDK 923
>gi|297705333|ref|XP_002829532.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1 [Pongo abelii]
Length = 920
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 140/545 (25%), Positives = 229/545 (42%), Gaps = 96/545 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L + E ++I + L+LG++E+S+
Sbjct: 412 IARLTGSASTAKKIDIIKGLFVACHHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLT 471
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 472 PPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPE 531
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 532 HCK--LSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFS 589
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + V ILD E + WD + F + D
Sbjct: 590 RNQEDNTGKYPDIISRIPKVKCPSVTSFILDTEAVAWDHEKKQIQPFQVLTTRKRKEVDA 649
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 650 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 690
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 691 EGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 750
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + D + C++GTG SDEE
Sbjct: 751 LNGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEE 805
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ LK P R Y V + PD W++ K LS++
Sbjct: 806 LEEHHQSLKALVLPSPRPY------------VRIDGAVIPDHWLDPSAVWEVKCADLSLS 853
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G++ G
Sbjct: 854 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSG 913
Query: 615 GLQDD 619
+D
Sbjct: 914 SDPED 918
>gi|1151001|gb|AAC49485.1| hypothetical protein UND407 [Saccharomyces cerevisiae]
Length = 407
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 172/343 (50%), Gaps = 27/343 (7%)
Query: 46 FSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNF 105
+ AL L LP R+R Y +K+ VL + L + K+SA RL +W++ GN
Sbjct: 70 YPALVLALPY--RDRRIYNIKDYVLIRTICSYLKLPKNSATEQRLKDWKQ--RVGKGGNL 125
Query: 106 P-MVAAEVLQRRQGMISGGLTIKELNDLLDRLAS---SENRAEKISVLST----LIKKTN 157
++ E+ +RR S +TI +N LD L+ + R K V S ++ +
Sbjct: 126 SSLLVEEIAKRRAEPSSKAITIDNVNHYLDSLSGDRFASGRGFKSLVKSKPFLHCVENMS 185
Query: 158 AQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQD 217
E+K+ I+LK+ +G E + + +HPDA+D +V DLK+V KL D R K D
Sbjct: 186 FVELKYFFDIVLKNRVIGGQEHKLLNCWHPDAQDYLSVISDLKVVTSKLYDPKVRLKDDD 245
Query: 218 --IEVGKAVRPQLAMRIGDAH-AAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSR 272
I+VG A PQLA ++ ++ R LH + ++E K DG+RIQ+H G I +FSR
Sbjct: 246 LSIKVGFAFAPQLAKKVNLSYEKICRTLH-DDFLVEEKMDGERIQVHYMNYGESIKFFSR 304
Query: 273 SFLDHSE-YGHAMSK-IIEQNVL----VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAA 326
+D++ YG ++S I Q++ V C+LDGEM+ +D FG + AK A
Sbjct: 305 RGIDYTYLYGASLSSGTISQHLRFTDSVKECVLDGEMVTFDAKRRVILPFGLVKGSAKEA 364
Query: 327 RDGLS---SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKV 366
S D Y FD+LY+ TS+ L +R + L +
Sbjct: 365 LSFNSINNVDFHPLYMVFDLLYLNGTSLTPLPLHQRKQYLNSI 407
>gi|383418319|gb|AFH32373.1| DNA ligase 1 [Macaca mulatta]
Length = 919
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 140/545 (25%), Positives = 229/545 (42%), Gaps = 96/545 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 411 IARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLT 470
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 471 PPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPE 530
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 531 HCK--LSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFS 588
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 589 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 648
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 649 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 689
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 690 EGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 749
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + D + C++GTG SDEE
Sbjct: 750 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEE 804
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ LK P R Y V + PD W++ K LS++
Sbjct: 805 LEEHHQSLKALVLPSPRPY------------VRIDGAVTPDHWLDPSAVWEVKCADLSLS 852
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G++ G
Sbjct: 853 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSG 912
Query: 615 GLQDD 619
+D
Sbjct: 913 SDPED 917
>gi|195500457|ref|XP_002097381.1| GE24522 [Drosophila yakuba]
gi|194183482|gb|EDW97093.1| GE24522 [Drosophila yakuba]
Length = 785
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 132/538 (24%), Positives = 231/538 (42%), Gaps = 65/538 (12%)
Query: 120 ISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEK 179
+ L ++E+ ++L +L E+ +L L K +++ I ++ DL++ +
Sbjct: 119 VQSKLYLQEVEEMLLKLVERTKEDEQTKLLHELCSKATDLDLRTFIRLVKHDLRINARAR 178
Query: 180 SIFHEFHPDAEDLFNVTCDLKLVC------EKLKD------RNQRHKRQDIEVGKAVRPQ 227
I F P+A + + DL + E KD + ++ I+V + P
Sbjct: 179 HILDAFGPEAYPAYQSSRDLVAIVRQFAGKENKKDAPSPAKKAKKTNSSAIQVMTPISPM 238
Query: 228 LAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAM 284
LA A++K + E K+DG+R+QIHK G++ +FSR+ +DH A+
Sbjct: 239 LASPCKSVEEAFKKSPAG-LYSEIKYDGERVQIHKQGNDFKFFSRNLKPVVDHK--IRAL 295
Query: 285 SKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGS-----NQEIAKAARDGLSSDRQLCY 338
+ I Q ILD E+++ DT FGS Q A AA +C
Sbjct: 296 KEYIPQAFPGGGEMILDSEIILVDTDTGALLPFGSLGAHKKQTFANAA---------VCL 346
Query: 339 FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLV 398
F FD + + ++R E+L++ ++P + SHV + S
Sbjct: 347 FVFDCILYDGEDLTQLPFRKRREILEQNIEP-------------IKSHV----QLSESEF 389
Query: 399 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI---RAGSDLDVL 455
E+ + EG+VLK S ++PG R+ WLK+K +Y+ + D++
Sbjct: 390 LKTTRELAVMTARVLHANLEGVVLKSPSSTYQPGKRN--WLKVKKDYLFDGKMADTADLV 447
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
++G +YGSG++GG ++ FL+ D + R + + +V +GL D V L
Sbjct: 448 VLGAWYGSGKKGGTLSIFLMGCY-----DAFGRLWKTVTKVHSGLDDATNAEVHDSLIKL 502
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 575
+ + A PS+ + + PDV + P + + IT T ++ S+RF
Sbjct: 503 TERAD--ANAMPSWLLCSKSL--VPDVLAKDPLEMPVWEITGAEFTKSDAHTASGISIRF 558
Query: 576 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGL-QDDKPKQFRSSRKGEK 632
PRI R R DK + D+ +L +S +D+KP +S+ + EK
Sbjct: 559 PRITRRRSDKSTKEATDLAHLEDLFEASKKNVNVDLLLANCSKDEKPIDIKSTPQKEK 616
>gi|402906128|ref|XP_003915856.1| PREDICTED: DNA ligase 1 isoform 1 [Papio anubis]
Length = 919
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 140/545 (25%), Positives = 229/545 (42%), Gaps = 96/545 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 411 IARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLT 470
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 471 PPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPE 530
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 531 HCK--LSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFS 588
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 589 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 648
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 649 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 689
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 690 EGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 749
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + D + C++GTG SDEE
Sbjct: 750 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEE 804
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ LK P R Y V + PD W++ K LS++
Sbjct: 805 LEEHHQSLKALVLPSPRPY------------VRIDGAVTPDHWLDPSAVWEVKCADLSLS 852
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G++ G
Sbjct: 853 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSG 912
Query: 615 GLQDD 619
+D
Sbjct: 913 SDPED 917
>gi|350411865|ref|XP_003489474.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1-like [Bombus
impatiens]
Length = 945
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 184/402 (45%), Gaps = 53/402 (13%)
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-KNGSEIHYFSRSFLD 276
I G ++P LA + G + E K+DG+R QIH +I +SR+ +
Sbjct: 561 ITPGIPMKPMLAHPTKGVQEVLTRFDGLKFTCEWKYDGERAQIHLAEDGKISIYSRNQEN 620
Query: 277 H-SEYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR-DGLSSD 333
+ S+Y + + Q V CILD E + WD + F Q ++ R D +D
Sbjct: 621 NTSKYPDIIGRFKNTQGEEVKSCILDCEAVAWDNENKQILPF---QILSTRKRKDANEAD 677
Query: 334 --RQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
Q+C F FD+LY+ ++ Q +R ELL+K K G +
Sbjct: 678 IKVQVCVFMFDLLYLNGEPLVQQPFIKRRELLKKNFKEVIGEWKFAT------------- 724
Query: 392 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA- 448
SL +++V+ F E+++ EG+++K L + +E RS WLKLK +Y+
Sbjct: 725 ----SLDTSTMEQVQDFLDESVKGNCEGLMVKTLEQDATYEIAKRSRNWLKLKKDYLEGV 780
Query: 449 GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAV 508
G LDV++IGGY G G+R G FL+A D + S C++GTG S+E+L
Sbjct: 781 GDTLDVVVIGGYIGKGKRTGTYGGFLLACY-----DQENEEYQSVCKIGTGFSEEDLQ-- 833
Query: 509 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT----SDIR 560
K +F+++ P+ S+Y+ +S PD W E + K LS++ + +
Sbjct: 834 --KHTEFFKEHIIPQTK--SYYRY--DSSLEPDHWFEPVQVWEIKCADLSLSPVHKAAVG 887
Query: 561 TIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
I E SLRFPR R+R DK D Q + +S
Sbjct: 888 IIDPE---KGISLRFPRFVRIRDDKNNEDATSAQQVANMYNS 926
>gi|148913010|ref|YP_001293324.1| hypothetical protein GTPV_gp127 [Goatpox virus Pellor]
Length = 557
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 215/491 (43%), Gaps = 53/491 (10%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
L + +++ L+ L + +K L+ + ++K I+ I DL++ K + +
Sbjct: 109 LLLNDVDMFLNHLTTLTKEKDKQIFLTMISSICTTNDLKCFILFIKNDLQIKAGVKCVLN 168
Query: 184 EFHPDAEDLFNVTCDLKLVC-----EKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAA 238
A + F + DLK + KL D N + + V+P LA ++ A
Sbjct: 169 ALDKHAYNHFKKSIDLKKIVFGISLNKLNDNN-------MVLFTPVKPMLADVCKSSYYA 221
Query: 239 WRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVD 295
++K + + E K+DG+RIQIHK + YFSR+ L H G + +
Sbjct: 222 FKK-YKDGICAEIKYDGERIQIHKENNLYKYFSRNLKPVLFHKIEGFD-EFLTSAFPSAN 279
Query: 296 RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQS 355
ILD E+++ D + NRF FGS + L + C F FD L+ + S+I
Sbjct: 280 NFILDAELILIDLNTNRFVPFGS----LGINKKKLFKNSSTCLFVFDCLFYNNVSLISLP 335
Query: 356 LKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN 415
R +++ + K ++ +V + + + D++ K + I
Sbjct: 336 FVNRRKIIVDNINEIKNKV--MVSE---------------AFYVYKEDDLNKIMDDVIRK 378
Query: 416 RDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQ 472
+ EG++LK + + PG R WLK+K +Y+ GS D++++G YYG G +GG +
Sbjct: 379 KLEGLILKGINIDYVPGKRG--WLKMKKDYLNDGSMADSADLVVLGSYYGKGSKGGTPSI 436
Query: 473 FLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV 532
FL+ + + + + ++ C +G D+ L V +++ F K + P + V
Sbjct: 437 FLMGCYDNESNN---WKTVTKC---SGHDDDTLKKVQKEIE--FLKISKDTKKIPKWLIV 488
Query: 533 TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLD 592
+ PD + P+KS + I+ T + S+RFPR ++RYDK W +
Sbjct: 489 --DKIYYPDFVVCDPKKSQVWEISGSSFTKSIHHTADGISIRFPRFKKIRYDKNWLSATN 546
Query: 593 VQSFVELVHSS 603
+ L S
Sbjct: 547 LNELKNLYKES 557
>gi|344269407|ref|XP_003406544.1| PREDICTED: DNA ligase 1 [Loxodonta africana]
Length = 917
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 136/534 (25%), Positives = 219/534 (41%), Gaps = 92/534 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RLA S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 409 IARLAGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALAQAVSLT 468
Query: 183 ---HEFHPDAED-----------------------LFNVTCDLKLVCEKLKDRNQRHKRQ 216
EF P D F DL + L + H +
Sbjct: 469 PPGQEFPPAVVDAGKGRTAEARKMWLDEQGMVLKQTFCEVPDLDCIVPVLLEHGLEHLPE 528
Query: 217 D--IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRS 273
+ G ++P LA ++ E K+DG R QIH G E+ FSR+
Sbjct: 529 HCRLSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHVLEGGEVKIFSRN 588
Query: 274 FLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS 331
D++ +Y + +I + + V ILD E + WD + F + D
Sbjct: 589 QEDNTGKYPDIIDRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKDVDASE 648
Query: 332 SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
Q+C +AFD++Y+ S++ + L R +LL++ + V +G
Sbjct: 649 IQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVETEG 689
Query: 392 EPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIR 447
E + SL + D++ +F ++++ + EG+++K D+ + +E RS WLKLK +Y+
Sbjct: 690 EFVFATSLDTKDTDQIAEFLEQSVRDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLE 749
Query: 448 A-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 506
G LD+++IG Y G G+R G FL+A D + C++GTG SDEEL+
Sbjct: 750 GVGDTLDLVVIGAYLGRGKRAGRYGGFLLATY-----DKESEELQAICKLGTGFSDEELE 804
Query: 507 AVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSD 558
L+ P R Y V + PD W+E K LS++
Sbjct: 805 KHHQSLQALVLPSPRSY------------VRADGAVAPDHWLEPSTVWEVKCADLSLSPI 852
Query: 559 IRTIRSEV-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS-SNGTTQKG 610
R V SLRFPR R+R DK + +L + S QKG
Sbjct: 853 YPAARGLVDREKGISLRFPRFIRIRDDKKPEEATTSAQVAQLYQAQSQIQNQKG 906
>gi|307595638|ref|YP_003901955.1| ATP-dependent DNA ligase I [Vulcanisaeta distributa DSM 14429]
gi|307550839|gb|ADN50904.1| DNA ligase I, ATP-dependent Dnl1 [Vulcanisaeta distributa DSM
14429]
Length = 607
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 133/505 (26%), Positives = 230/505 (45%), Gaps = 70/505 (13%)
Query: 124 LTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ ++ D L +A + K+ +L+ L + +E K+I ++ L+LG+++ +
Sbjct: 129 LTMGKVYDTLMSIARASGEGAQDTKVKLLTYLFSRAKPEEAKYIARFVIGRLRLGVADMT 188
Query: 181 IFHEFHPDA--------EDLFNVTCDLKLVCEKLKDRNQRH-KRQDIEVGKAVRPQLAMR 231
I DA E +++ DL + + + Q + + G ++P LA R
Sbjct: 189 ILDALS-DAYKVPREALERAYHIYPDLGYIAKMVAQEGQNALAKIHVTPGVPIQPMLAER 247
Query: 232 IGDAHAAWRKLHGKEVVIECKFDGDRIQIHKN-GSEIHYFSRSFLDHSEYGHAMSKIIEQ 290
+ + KL G +V E K+DG+R QIHK EI FSR + + +++ +++
Sbjct: 248 LSTSTEILAKLGGVAMV-EYKYDGERAQIHKTRDGEIRIFSRRLENITHAYPDVAEYVKE 306
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCY----FAFDVLYV 346
+ I++GE++ D F F QE+ R + Y F FD++Y+
Sbjct: 307 AIDAKEYIVEGEIVAIDPDTGEFRPF---QELMHRKRKHDIKEAMKEYPVNIFLFDIMYI 363
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
+ + L +R L +V+KPS+ H+ W ++ ++ +E++
Sbjct: 364 DGQDLTNLPLIDRKRKLLEVLKPSE------------YVHL-----ATWRII-NDAEELD 405
Query: 407 KFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGS 463
KFF E I + EG++ K + S +E G R W+K K +Y +D LD++++G ++G
Sbjct: 406 KFFHEAISDGCEGVMCKSIKADSIYEMGARGWLWIKYKRDYRSELTDTLDLVVVGAFWGR 465
Query: 464 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
G+R G L+A A P D +F + +VG+G +DE+L + L PY +++P+
Sbjct: 466 GKRAGTYGALLIA-AYDPKTD----QFYTVSKVGSGFTDEDLVKLKQMLDPYRIPHKHPR 520
Query: 524 RAPPSFYQVTNNSKERPDVW------IESPEKSIILSI--TSDIRTIRSEVFSAPYSLRF 575
SK PDVW +E I LS T + IR V A +RF
Sbjct: 521 VV----------SKMEPDVWFVPAVVLEIIGAEITLSPLHTCCMGAIRPGVGLA---IRF 567
Query: 576 PRID-RVRYDKPWHDCLDVQSFVEL 599
PR R R DK V +E+
Sbjct: 568 PRFTGRYRTDKSPEQATTVDEILEM 592
>gi|4099066|gb|AAD00532.1| DNA ligase [Pyrobaculum aerophilum str. IM2]
Length = 589
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 145/568 (25%), Positives = 248/568 (43%), Gaps = 67/568 (11%)
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGG 123
G+ E + + A G + +A+ ++K G A + A+ +R G+++ G
Sbjct: 64 GVAEKLCLRAVSKATGAAVSELEAL----YKKTGDVGEAARRALAAS----KRPGLLAFG 115
Query: 124 ----LTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKDLKLGI 176
L + E+ D L ++A + K+++LS+L + +E K+I ++ L+LG+
Sbjct: 116 SQKPLEVSEVYDTLLKVARATGEGAQDMKVALLSSLFARATPEEGKYIARFVVGKLRLGV 175
Query: 177 SEKSIFHEFHPDA--------EDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQL 228
++ +I DA E +++ DL + + + + + + I G V P L
Sbjct: 176 ADMTIIEALS-DAYGVNKEALEKAYHIYPDLGRLAKHVAEGKPLDEIR-ITPGVPVLPML 233
Query: 229 AMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKII 288
A R+ A KL G + E K+DG+R QIH + FSR D + + K +
Sbjct: 234 AQRLSSASEILAKL-GGSAICEYKYDGERAQIHLTPGGVKIFSRRLEDITHAYPDVVKAV 292
Query: 289 EQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARD-GLSSDRQL---CYFAFDVL 344
++ V IL+GE++ D F QE+ R +++ +L + FDVL
Sbjct: 293 KEAVSAKEAILEGEIVAVDPDTGDMLPF---QELMHRKRKHDVATAVELYPTVLYLFDVL 349
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
YV + + L R + RL +V + S + W + N +
Sbjct: 350 YVDGEDLTEEPLIYR-----------RVRLSEIVCETDKVSIAK------WRIF-DNAEA 391
Query: 405 VEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGS 463
V+ FF E++ EG++ K S +E G R W+K K +Y D +D++++G ++G
Sbjct: 392 VDVFFHESVSMGTEGLICKSPSSIYEMGARGWNWIKYKRDYRSEMIDTVDLVVVGAFHGR 451
Query: 464 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
G+R G FL+A A P+ D F + C+VG+G +D +L + L+P ++ P
Sbjct: 452 GKRAGLYGAFLLA-AYDPSTDM----FYTVCKVGSGFTDADLKKMYEILQP----FKIPH 502
Query: 524 RAPPSFYQVTNNSKERPDVWIESPEKSIILSI--TSDIRTIRSEVFSAPYSLRFPRID-R 580
R P ++ + P V IE I LS T + +R V A +RFPR R
Sbjct: 503 RHPRVVSKMEADVWFVPQVVIEVIGAEITLSPLHTCCLGAVRPGVGLA---VRFPRFTGR 559
Query: 581 VRYDKPWHDCLDVQSFVELVHSSNGTTQ 608
R DK V +EL Q
Sbjct: 560 YRSDKSPEQATTVAEMLELYKRQKKVVQ 587
>gi|15679575|ref|NP_276692.1| DNA ligase [Methanothermobacter thermautotrophicus str. Delta H]
gi|2494167|sp|Q50566.1|DNLI_METTH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|1272332|gb|AAC44812.1| putative DNA ligase [Methanothermobacter thermautotrophicus]
gi|2622703|gb|AAB86053.1| DNA ligase [Methanothermobacter thermautotrophicus str. Delta H]
Length = 561
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 235/507 (46%), Gaps = 73/507 (14%)
Query: 121 SGGLTIKELNDLLDRLAS-SENRAE--KISVLSTLIKKTNAQEMKWIIMIILKDLKLGIS 177
S LT++ + L LAS S +RA+ KI++L ++ + E ++I +L++L++G++
Sbjct: 111 SQPLTVEFVYSRLKALASASGDRAQSKKINILVEVLSQAKPLEARYITRTVLEELRVGVA 170
Query: 178 E----KSIFHEFHPD---AEDLFNVTCDLKLVCEKLKDRNQRH-KRQDIEVGKAVRPQLA 229
E +I F D E +T DL +V ++ + R ++E G+ V+P LA
Sbjct: 171 EGIIRDAIARAFEVDPALVERAHMLTNDLGMVAAVAREEGEPGLGRLNLEPGRPVKPMLA 230
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE 289
+A +L E K+DG R+QIH+ G EI F+R + + + + +E
Sbjct: 231 QLASSIESAITELG--RAFCETKYDGIRVQIHRCGDEISIFTRRLENITAAVPEILEGVE 288
Query: 290 QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR-----DGLSSDRQLCYFAFDVL 344
+ + D I++GE++V T R A F Q I + R + L+ + L F FDVL
Sbjct: 289 EALPADDYIVEGEIIV--TMDGRPASF---QYILQRVRRKYDVERLTREVPLSLFLFDVL 343
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLE-TLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
Y + +I + L+ R E+L+ ++ GR+E + + D G + N++
Sbjct: 344 YHRE-PLIDEPLRHRREVLESILSEIPGRVEASRMVDVGPD----------------NLN 386
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGS 463
+ F+E+I EGI++KD + + PG R K LK K E LD++++GG YG
Sbjct: 387 DALWLFEESIREGHEGIMIKDTEAPYIPGIRGKKMLKFKAE----PETLDLIVVGGTYGR 442
Query: 464 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
G+R V +L+A + + D ++ V TGL DE L +L K +
Sbjct: 443 GKRAHLVGSYLLAARDEDSGD-----LVTVAHVATGLDDETLQ----QLSERMEKLAIER 493
Query: 524 RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 583
+ RP++ +E I ++S + + YSLRFP + R+R
Sbjct: 494 KGRKLLV--------RPEIILEVAYSEI----------VKSPEYESGYSLRFPVVKRIRD 535
Query: 584 DKPWHDCLDVQSFVELVHSSNGTTQKG 610
D D +D +E + S Q G
Sbjct: 536 DLCLDD-VDTVGRIESLFQSGQPDQPG 561
>gi|406925545|gb|EKD61995.1| hypothetical protein ACD_52C00325G0006 [uncultured bacterium]
Length = 571
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 131/482 (27%), Positives = 228/482 (47%), Gaps = 61/482 (12%)
Query: 125 TIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSI 181
++ E+ + L ++A E K L+ LI K + K+++ I L L+LG S+K++
Sbjct: 111 SVSEVYNELVKIAKIEGEGSVGHKTDSLAVLISKLDPLSAKFVVRIPLGRLRLGFSDKTL 170
Query: 182 F----------HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIE--VGKAVRPQLA 229
+ + V D+ L+ +++K+ +D+ VG V P LA
Sbjct: 171 LDALSWMEAGDKSLKSQLDKAYEVIPDVGLLAKQVKELGVARATKDVMPIVGVPVMPMLA 230
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-KNGSEIHYFSRSFLDHSEYGHAMSKII 288
R+ + K+ GK V +E KFDG R+ IH K S I F+R+ D S+ +S I
Sbjct: 231 QRLKNPEEMIAKM-GK-VAVEPKFDGLRLLIHFKRPSFIKAFTRNLNDVSDMFPELSDI- 287
Query: 289 EQNVLVDRCILDGEMLVWDTSLNRFAEFGSN-QEIAKAARDGLSSDRQLCYFAFDVLYVG 347
+ + ILD E + D +L + A+F + Q K + L S + + FD+++
Sbjct: 288 GRFLNAKEVILDAETVGMDPNLAKIADFQTTMQRRRKHDIELLKSKIPVAFQIFDLIFRD 347
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
S + + +R +L+K +K +K T V D W + + E+++
Sbjct: 348 GKSFMGEPYTKRRNVLEKTIKENK----TFVVDD------------YW--ITESAQEIKR 389
Query: 408 FFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSG 464
+E +++ EG+++K SK+ PG +W+K+K G LD +++G G G
Sbjct: 390 RHREMVDDGLEGVIVKRADSKYVPGRTGWRWVKMKGAVGSEGKLADTLDCVVLGYSAGRG 449
Query: 465 RRGG-EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
+R V QFLV + + +F++ ++GTGLSDEE + +L+ +
Sbjct: 450 KRAAFGVGQFLVGVRK-------GEKFVTVTKIGTGLSDEEFRELNRRLQ------KIKL 496
Query: 524 RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 583
R P ++V N + PD W+E +++ I +D T+ S +A Y+LRFPR+ R R
Sbjct: 497 RDKPKEFEVHKNLE--PDNWVEP---VVVVEIAADNITV-SPTHTARYALRFPRLVRFRD 550
Query: 584 DK 585
DK
Sbjct: 551 DK 552
>gi|22595668|gb|AAN02701.1| DNA ligase-like protein [Lumpy skin disease virus NW-LW]
Length = 559
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 213/475 (44%), Gaps = 53/475 (11%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
L + +++ L+ L + +K L+ + A ++K I+ I DL++ K +
Sbjct: 111 LLLNDVDMFLNHLTTLTKEKDKQMFLTMISSICTADDLKCFILFIKNDLQIKAGVKCVLD 170
Query: 184 EFHPDAEDLFNVTCDLKLVC-----EKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAA 238
A + F + DLK + KL D N + + V+P LA ++ A
Sbjct: 171 ALDKHAYNHFKNSIDLKKIVFGISLNKLNDDN-------MVLFTPVKPMLADVCKSSYYA 223
Query: 239 WRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVD 295
++K + + E K+DG+RIQIHK+ + YFSR+ L H G + +
Sbjct: 224 FKK-YKDGICAEIKYDGERIQIHKDNNLYKYFSRNLKPVLFHKIEGFD-EFLTSAFPSAN 281
Query: 296 RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQS 355
ILD E+++ D + N+F FGS + L + C F FD L+ + S+I
Sbjct: 282 NFILDAELILIDLNTNKFVPFGS----LGINKKNLFKNSSTCLFVFDCLFYNNVSLISLP 337
Query: 356 LKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN 415
R +++ + K ++ +V + + + D++ K + I+
Sbjct: 338 FVNRRKIIVDNINEIKNKV--MVSE---------------AFYVYKEDDLNKIMDDVIKK 380
Query: 416 RDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQ 472
+ EG++LK + + PG R WLK+K +Y+ GS D++++G YYG G +GG +
Sbjct: 381 KLEGLILKGINIDYVPGKRG--WLKMKKDYLDDGSMADSADLVVLGSYYGKGSKGGAPSI 438
Query: 473 FLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV 532
FL+ + + + + ++ C +G D+ L V +++ F K + P + V
Sbjct: 439 FLMGCYDNESNN---WKTVTKC---SGHDDDTLKKVQKEIE--FLKISKDTKKIPKWLIV 490
Query: 533 TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 587
+ PD + P+KS + I+ T + S+RFPR ++RYDK W
Sbjct: 491 --DKIYYPDFVVCDPKKSQVWEISGSSFTKSIHHTADGISIRFPRFKKIRYDKNW 543
>gi|15150572|ref|NP_150567.1| LSDV133 DNA ligase-like protein [Lumpy skin disease virus NI-2490]
gi|15149144|gb|AAK85094.1| LSDV133 DNA ligase-like protein [Lumpy skin disease virus NI-2490]
Length = 559
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 213/475 (44%), Gaps = 53/475 (11%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
L + +++ L+ L + +K L+ + A ++K I+ I DL++ K +
Sbjct: 111 LLLNDVDMFLNHLTTLTKEKDKQMFLTMISSICTADDLKCFILFIKNDLQIKAGVKCVLD 170
Query: 184 EFHPDAEDLFNVTCDLKLVC-----EKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAA 238
A + F + DLK + KL D N + + V+P LA ++ A
Sbjct: 171 ALDKHAYNHFKNSIDLKKIVFGISLNKLNDDN-------MVLFTPVKPMLADVCKSSYYA 223
Query: 239 WRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVD 295
++K + + E K+DG+RIQIHK+ + YFSR+ L H G + +
Sbjct: 224 FKK-YKDGICAEIKYDGERIQIHKDNNLYKYFSRNLKPVLFHKIEGFD-EFLTSAFPSAN 281
Query: 296 RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQS 355
ILD E+++ D + N+F FGS + L + C F FD L+ + S+I
Sbjct: 282 NFILDAELILIDLNTNKFVPFGS----LGINKKNLFKNSSTCLFVFDCLFYNNVSLISLP 337
Query: 356 LKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN 415
R +++ + K ++ +V + + + D++ K + I+
Sbjct: 338 FVNRRKIIVDNINEIKNKV--MVSE---------------AFYVYKEDDLNKIMDDVIKK 380
Query: 416 RDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQ 472
+ EG++LK + + PG R WLK+K +Y+ GS D++++G YYG G +GG +
Sbjct: 381 KLEGLILKGINIDYVPGKRG--WLKMKKDYLDDGSMADSADLVVLGSYYGKGSKGGAPSI 438
Query: 473 FLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV 532
FL+ + + + + ++ C +G D+ L V +++ F K + P + V
Sbjct: 439 FLMGCYDNESNN---WKTVTKC---SGHDDDTLKKVQKEIE--FLKISKDTKKIPKWLIV 490
Query: 533 TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 587
+ PD + P+KS + I+ T + S+RFPR ++RYDK W
Sbjct: 491 --DKIYYPDFVVCDPKKSQVWEISGSSFTKSIHHTADGISIRFPRFKKIRYDKNW 543
>gi|71649673|ref|XP_813552.1| DNA ligase I [Trypanosoma cruzi strain CL Brener]
gi|70878445|gb|EAN91701.1| DNA ligase I, putative [Trypanosoma cruzi]
Length = 701
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 188/410 (45%), Gaps = 48/410 (11%)
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH---KNGSEIHYFSRSF 274
I G V+PQLA +A + GK E K+DG+R QIH + G +I FSR+
Sbjct: 322 IRPGIPVKPQLAHPTSGINAILERFQGKAFTSEYKYDGERAQIHYSKEKGYQI--FSRNA 379
Query: 275 LDHS-EYGH--AMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS 331
H+ +Y AM + V+ I+D E++ + F Q + S
Sbjct: 380 ETHTGKYPDIIAMLPRVFSTEAVESFIIDSEVVAVNKETGALQAFQVLQHRGRKNVSFES 439
Query: 332 SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
+C FAFD+LY + + + L ER ++L P + +H
Sbjct: 440 VTIPVCVFAFDILYFNGSPQMTKPLLERRQVLYSYFTPIHAAFQ--FAEH---------- 487
Query: 392 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAG 449
L +V+E++ F +I++ EG+++K L + + P RS WLKLK +Y+
Sbjct: 488 -----LDGTDVEEIQSFLDRSIKDGCEGLMVKTLKEEAAYTPAKRSYCWLKLKKDYMDGV 542
Query: 450 SD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAV 508
+D LD++ IG YYG G+R G FL+A + + F S C++G+G DE+L+++
Sbjct: 543 TDTLDLVPIGAYYGKGKRTGVFGGFLLACYNSDSDE-----FQSICKIGSGFLDEQLESL 597
Query: 509 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVF- 567
L+ + K + P +Y+ ++E+PDVW+E+ + + I + +
Sbjct: 598 TQALQSFVLKEQ------PRYYR----AEEKPDVWLEASNVWEVKAADLSISPVHFAAYG 647
Query: 568 ----SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEY 613
S +LRFPR RVR DK ++ + + + + + +EY
Sbjct: 648 IVDPSKGIALRFPRFVRVREDKKANEATFATQIAAMYTAQSLSRKNYEEY 697
>gi|195329554|ref|XP_002031475.1| GM26013 [Drosophila sechellia]
gi|194120418|gb|EDW42461.1| GM26013 [Drosophila sechellia]
Length = 783
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 218/504 (43%), Gaps = 64/504 (12%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
L ++E+ ++L +L E+ +L L K +++ I ++ DL++ + I
Sbjct: 123 LYLQEVEEMLLKLVERTKEDEQTDLLQKLCSKATDLDLRTFIRLVKHDLRINARARHILD 182
Query: 184 EFHPDAEDLFNVTCDLKLVC------EKLKD------RNQRHKRQDIEVGKAVRPQLAMR 231
F PDA + + DL + E KD + ++ I+V + P LA
Sbjct: 183 AFGPDAYPTYQSSRDLVAIVGQFAGKENKKDASSAVRKAKKTNSSGIQVMTPISPMLASP 242
Query: 232 IGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKII 288
A++K + E K+DG+R+QIHK G++ +FSR+ +DH + K I
Sbjct: 243 CKSVEEAFKK-SPTGLYSEIKYDGERVQIHKQGNDFKFFSRNLKPVVDHK--IRDLKKYI 299
Query: 289 EQNVL-VDRCILDGEMLVWDTSLNRFAEFGS-----NQEIAKAARDGLSSDRQLCYFAFD 342
Q ILD E+++ DT FGS Q A AA +C F FD
Sbjct: 300 PQAFPGGGEMILDSEIILVDTDTGALLPFGSLGAHKKQTFANAA---------VCLFVFD 350
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
+ + ++R ++L++ ++P + SHV + S
Sbjct: 351 CILYDGEDLTQLPFRKRRKILEQNIQP-------------IRSHV----QLSESEFLKTT 393
Query: 403 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI---RAGSDLDVLIIGG 459
E+ + EG+VLK S ++PG R+ WLK+K +Y+ + D++++G
Sbjct: 394 RELATMTARVLHANLEGVVLKSPTSTYQPGKRN--WLKVKKDYLFDGKMADTADLVVLGA 451
Query: 460 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
+YGSG++GG ++ FL+ D + R + + +V +GL D V L +
Sbjct: 452 WYGSGKKGGTLSIFLMGCY-----DAFGRLWKTVTKVHSGLDDATNAKVHESLIKLTERA 506
Query: 520 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 579
+ A PS+ + + PDV + P K + IT T ++ S+RFPRI
Sbjct: 507 D--ANAIPSWLLCSKSL--VPDVLAKDPMKMPVWEITGAEFTKSDAHTASGISIRFPRIT 562
Query: 580 RVRYDKPWHDCLDVQSFVELVHSS 603
R R DK + D+ +L +S
Sbjct: 563 RRRSDKSAKEANDLAHLEDLFEAS 586
>gi|397486056|ref|XP_003814149.1| PREDICTED: DNA ligase 1 isoform 2 [Pan paniscus]
Length = 851
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 140/545 (25%), Positives = 229/545 (42%), Gaps = 96/545 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 343 IARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLT 402
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 403 PPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPE 462
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 463 HCK--LSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFS 520
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 521 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 580
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 581 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 621
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 622 EGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 681
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + D + C++GTG SDEE
Sbjct: 682 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEE 736
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ LK P R Y V + PD W++ K LS++
Sbjct: 737 LEEHHQSLKALVLPSPRPY------------VRIDGAVIPDHWLDPSAVWEVKCADLSLS 784
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G++ G
Sbjct: 785 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSG 844
Query: 615 GLQDD 619
+D
Sbjct: 845 SDPED 849
>gi|330805110|ref|XP_003290530.1| hypothetical protein DICPUDRAFT_81260 [Dictyostelium purpureum]
gi|325079360|gb|EGC32964.1| hypothetical protein DICPUDRAFT_81260 [Dictyostelium purpureum]
Length = 1144
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 115/356 (32%), Positives = 185/356 (51%), Gaps = 38/356 (10%)
Query: 250 ECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYG-HAMSKIIEQNVLVDRCILDGEMLVWDT 308
E K+DG+RIQIHK+G++ FSR+ + + + I + ++ ILDGE+L+ DT
Sbjct: 279 EIKYDGERIQIHKDGNKFSCFSRNLKPLMPWKVDEVKQYIPKATKANQMILDGEVLLMDT 338
Query: 309 SLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVK 368
FG+ + + G D +C F FD+LY+ S+IH L+ER E+L+K V
Sbjct: 339 KTGIPLPFGT---LGAHKKKGFI-DATVCVFLFDILYLDGKSLIHLPLEERREILEKNVT 394
Query: 369 PSKGRLE----TLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKD 424
K R+E T+V G+ + + + + FKE + EG+V+K+
Sbjct: 395 VVKHRVEFSEVTIV--KGIQEKYKL------------TNLLNRAFKEKL----EGLVIKN 436
Query: 425 LGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAP 483
S +EPG R W+K+K +YI+ +D D++ IGGYYGSG GG V FL+A ++ +
Sbjct: 437 ADSIYEPGARH--WIKVKKDYIKGMADSADLIAIGGYYGSGSFGGLVTVFLMACYDKVS- 493
Query: 484 DTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVW 543
+R+ + + GL D+ +D + K+K +K P + + N PD
Sbjct: 494 ----KRYKTVVKASGGLDDKTIDKLQPKIKETMKKISKDHTKVPDWIDI--NKPYTPDFI 547
Query: 544 IESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+E P ++IL I S T ++ ++ YS+RFPRI R R DK + ++Q +EL
Sbjct: 548 VEHPRDAMILEIESAELT-KTNYHTSGYSMRFPRIVRFREDKDYKTATNLQELMEL 602
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LT+K+++D LD L S E++ ++S+L+KK Q+ + I II DLK+ K
Sbjct: 110 LTLKQVDDFLDSLTLSGKFDEQVKIISSLLKKCTPQDFRLICRIIDSDLKINTGAKFFLD 169
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRH 213
HP+A D + +L V EK+ Q+H
Sbjct: 170 ALHPNAYDAYKKANNLHGVIEKI----QKH 195
>gi|407416584|gb|EKF37703.1| DNA ligase I, putative [Trypanosoma cruzi marinkellei]
Length = 712
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 186/410 (45%), Gaps = 48/410 (11%)
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH---KNGSEIHYFSRSF 274
I G V+PQLA +A + GK E K+DG+R QIH + G +I FSR+
Sbjct: 322 IRPGIPVKPQLAHPTSGINAILERFQGKAFTSEYKYDGERAQIHYSKEKGYQI--FSRNA 379
Query: 275 LDHS-EYGH--AMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS 331
H+ +Y AM + VD I+D E++ + F Q + S
Sbjct: 380 ETHTGKYPDIIAMLPRVFSTETVDSFIIDSEVVAVNKETGALQAFQVLQHRGRKNVSFES 439
Query: 332 SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
+C FAFD+LY + + + L ER ++L P + +H
Sbjct: 440 VTIPVCVFAFDILYFNGSPQMAKPLLERRQILYSYFTPIHAAFQ--FAEH---------- 487
Query: 392 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAG 449
L +V+E++ F +I++ EG+++K L + + P RS WLKLK +Y+
Sbjct: 488 -----LDGTDVEEIQSFLDRSIKDGCEGLMVKTLKEEAAYTPAKRSHHWLKLKKDYMDGV 542
Query: 450 SD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAV 508
+D LD++ IG YYG G+R G FL+A + + F S C++G+G DE+L+++
Sbjct: 543 TDTLDLVPIGAYYGKGKRTGVFGGFLLACYNSDSDE-----FQSICKIGSGFQDEQLESL 597
Query: 509 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVF- 567
L+ + P +Y+ ++E+PDVW+E+ + + I + +
Sbjct: 598 TQTLQSCVLMEQ------PRYYR----AEEKPDVWLEASNVWEVKAADLSISPVHFAAYG 647
Query: 568 ----SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEY 613
S +LRFPR RVR DK ++ + + + + + +EY
Sbjct: 648 LVDPSKGIALRFPRFVRVREDKKANEATFASQIAAMYTAQSLSRKNYEEY 697
>gi|353240611|emb|CCA72472.1| probable CDC9-DNA ligase I [Piriformospora indica DSM 11827]
Length = 826
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 131/524 (25%), Positives = 225/524 (42%), Gaps = 90/524 (17%)
Query: 146 ISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF----HEFHPDAEDLFNVTCDLKL 201
++ T I + + E K+II + L++G++E+++ H D ++ N +
Sbjct: 340 LAACQTTIAGSTSSEAKFIIRSLEGKLRIGLAERTVIVALAHAAVLDEKERRNKNWSKER 399
Query: 202 VCEKLKDRNQRHKRQDIEV--------------------------GKAVRPQLAMRIGDA 235
+ KL++ K+ E+ G ++P LA
Sbjct: 400 LSSKLEEATGILKQVYSEIPSYDLVIPALLKYGIWDLRAHCKLTPGIPLKPMLAKPTKAI 459
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHS----EYGHAMSKIIEQ 290
+ GK+ E K+DG+R Q+H+ + FSR+ D S + ++ + I+
Sbjct: 460 GEVLDRFEGKKFTCEYKYDGERAQVHRLEDGTVAVFSRNSEDMSKKYPDLMESLPRCIKD 519
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVG 347
N + D E + D + + F QE++K R + + ++C FAFD+LY+
Sbjct: 520 NT--KSFVFDAEAVAIDKNTGKLMPF---QELSKRKRKDVKVEDIAVRVCLFAFDLLYLN 574
Query: 348 DTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEK 407
++H+SL+ER LL+ E VP V + + S ++++
Sbjct: 575 GEPLLHKSLEERRALLR----------EHFVP-------VPLEFDFAKSSDGDTTEQIQT 617
Query: 408 FFKETIENRDEGIVLKDLGSK---WEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGS 463
F +E++++ EG+++K L S +EP RS WLKLK +Y+ G LD++++GGY+G
Sbjct: 618 FLEESVKDGCEGLMVKMLQSDESFYEPSRRSVNWLKLKKDYLAGVGDSLDLVVVGGYHGK 677
Query: 464 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
G+R FL+A D + + C++GTG SDE L LK +
Sbjct: 678 GKRTAVYGAFLLACY-----DADNEEWQTICKIGTGFSDEALQEHAKTLK---------E 723
Query: 524 RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP--------YSLRF 575
+ +PDVW E K + + +D+ S +++A SLRF
Sbjct: 724 LEISALRGDIKAGGAKPDVWFEP--KVVWEVLAADLSL--SPIYTAAQGLVEQRGISLRF 779
Query: 576 PRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
PR RVR DK D + E+ KGK+ G DD
Sbjct: 780 PRFIRVRDDKSADDATGPEQIAEMYQRQALAQSKGKKGKGDADD 823
>gi|426389527|ref|XP_004061171.1| PREDICTED: DNA ligase 1 [Gorilla gorilla gorilla]
Length = 906
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 140/545 (25%), Positives = 229/545 (42%), Gaps = 96/545 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 398 IARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLT 457
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 458 PPGQEFPPAVVDAGKGKAAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPE 517
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 518 HCK--LSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFS 575
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 576 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 635
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 636 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 676
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 677 EGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 736
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + D + C++GTG SDEE
Sbjct: 737 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEE 791
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ LK P R Y V + PD W++ K LS++
Sbjct: 792 LEEHHQSLKALVLPSPRPY------------VRIDGAVIPDHWLDPSAVWEVKCADLSLS 839
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G++ G
Sbjct: 840 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSG 899
Query: 615 GLQDD 619
+D
Sbjct: 900 SDPED 904
>gi|397486054|ref|XP_003814148.1| PREDICTED: DNA ligase 1 isoform 1 [Pan paniscus]
Length = 919
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 140/545 (25%), Positives = 229/545 (42%), Gaps = 96/545 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 411 IARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLT 470
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 471 PPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPE 530
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 531 HCK--LSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFS 588
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 589 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 648
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 649 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 689
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 690 EGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 749
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + D + C++GTG SDEE
Sbjct: 750 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEE 804
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ LK P R Y V + PD W++ K LS++
Sbjct: 805 LEEHHQSLKALVLPSPRPY------------VRIDGAVIPDHWLDPSAVWEVKCADLSLS 852
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G++ G
Sbjct: 853 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSG 912
Query: 615 GLQDD 619
+D
Sbjct: 913 SDPED 917
>gi|401426011|ref|XP_003877490.1| putative DNA ligase I [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493735|emb|CBZ29025.1| putative DNA ligase I [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 767
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/406 (28%), Positives = 185/406 (45%), Gaps = 49/406 (12%)
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHY-FSRSFLD 276
I G V+PQLA +L GK+ E K+DG+R QIH + + Y FSR+
Sbjct: 388 IRPGLPVKPQLAYPTSSITVILDRLQGKKFTSEYKYDGERAQIHYDKEKGFYIFSRNSET 447
Query: 277 HS-EYGHAMSKI--IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD 333
H+ +Y +S + + VD ILD E++ F Q + R ++ +
Sbjct: 448 HTGKYPDVISMLPKVFDPAEVDSFILDSEVVAVHPETGVLQAF---QVLQHRGRKNIAEE 504
Query: 334 R---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQ 390
+C F FD+LY ++++L++R ELL + + P +L
Sbjct: 505 DVIIPVCVFVFDILYFNGEPQLNKTLQQRRELLWRCIHPLPAKLSF-------------- 550
Query: 391 GEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA 448
L + V++V+ F + +I + EG+++K L + + P RS WLKLK +Y+
Sbjct: 551 ---ATYLDSDKVEDVQTFLERSIADGCEGLMVKTLEEEANYTPAKRSHYWLKLKKDYMDG 607
Query: 449 GSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA 507
+D LD++ I +YG G+R G FL+A + P D Y S C++GTG DEEL+
Sbjct: 608 VTDTLDLVPIAAFYGKGKRTGVFGGFLLACYD-PKADEYQ----SICKIGTGFQDEELEK 662
Query: 508 VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIR 563
+ LK + + P +Y+ E PDVW+ + K+ LS++ +
Sbjct: 663 LTQSLKSFVVDDK------PRYYRAGG---EEPDVWLTEAQVWEVKAADLSVSPVHQAAV 713
Query: 564 SEV-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 608
V + +LRFPR R R DK D Q ++ + + Q
Sbjct: 714 GLVDPNKGIALRFPRYLRQREDKKPADATSAQQVADMYKAQSSAAQ 759
>gi|295669945|ref|XP_002795520.1| DNA ligase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284605|gb|EEH40171.1| DNA ligase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 907
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 147/608 (24%), Positives = 255/608 (41%), Gaps = 125/608 (20%)
Query: 103 GNFPMVAAEVLQRRQGMISGG-LTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNA 158
G+ +VAA+ + M LT++ +++ L +A ++ +KIS + L+ +A
Sbjct: 331 GDLGLVAAKSRSNQPTMFKPKPLTVRGVHEGLLAIARTQGHGSQDKKISAIKKLLSSADA 390
Query: 159 -------------------QEMKWIIMIILKDLKLGISEKSIF---------HEFH---- 186
E K+II + L+LG++E+++ HE
Sbjct: 391 AVAGKGSKGIDITHNKGGPSEAKFIIRFLEGKLRLGLAERTVLVALAHAMVAHEVELQGK 450
Query: 187 --PDAEDLFNVTCDLKLVCEKLKDR-------------NQRHKRQDIEVGKAVRPQLAMR 231
P E L LK V +L N + K + ++ G ++P LA
Sbjct: 451 KAPATEQLAKGEEILKSVYSELPSYEVIIPAMLEHGIFNLKDKCK-LQPGVPLKPMLAKP 509
Query: 232 IGDAHAAWRKLHGKEVVIECKFDGDRIQIH------------------KNGSEI-HYFSR 272
+ GK E K+DG+R QIH K+G + FSR
Sbjct: 510 TKSITEVLDRFEGKNFTCEYKYDGERAQIHYISREAISECRATASTLQKDGGGVCAIFSR 569
Query: 273 SFLDHSE-YGHAMSKIIEQNVL---VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARD 328
+ D S+ Y + K+ +N + +LD E + WD + F Q + + +D
Sbjct: 570 NSEDLSKKYPDILGKL--ENWVKKGTKSFVLDCETVAWDVVGKKVLPF--QQLMTRKRKD 625
Query: 329 GLSSDRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSH 386
+ D ++ C FAFD+L++ + ++L+ER LL + P +G E + HG
Sbjct: 626 VKAEDVKVKVCVFAFDLLFLNGEPTVKKTLRERRSLLHEAFVPVEG--EFVFAQHGDT-- 681
Query: 387 VRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKP 443
++++E++ E+++ EG+++K L S +EP RS WLK+K
Sbjct: 682 -------------NDLEEIQTLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKK 728
Query: 444 EYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSD 502
+Y+ G LD++++G YYG G+R FL+A A P Y + C +GTG S+
Sbjct: 729 DYLAGIGDSLDLVVLGAYYGRGKRTSVYGAFLLA-AYNPTTQNYE----TICNIGTGFSE 783
Query: 503 EELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITS 557
L+ + + L P P FY ++ K++PDVW E P+ K+ L+++
Sbjct: 784 ALLEELYSALSPLVIDR------PKPFYDHSSVPKDQPDVWFE-PKYVWEVKAADLTLSP 836
Query: 558 DIRTIRSEVFSAP------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGK 611
+ E+ + SLRFPR + R DK + ++ ++
Sbjct: 837 RYKAAADEILGSENGAAKGISLRFPRYIKSREDKKPDEATTTRTVADMYRKQESVANVAP 896
Query: 612 EYGGLQDD 619
GG+ DD
Sbjct: 897 AKGGVDDD 904
>gi|397486058|ref|XP_003814150.1| PREDICTED: DNA ligase 1 isoform 3 [Pan paniscus]
Length = 888
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 140/545 (25%), Positives = 229/545 (42%), Gaps = 96/545 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 380 IARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLT 439
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 440 PPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPE 499
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 500 HCK--LSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFS 557
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 558 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 617
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 618 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 658
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 659 EGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 718
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + D + C++GTG SDEE
Sbjct: 719 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEE 773
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ LK P R Y V + PD W++ K LS++
Sbjct: 774 LEEHHQSLKALVLPSPRPY------------VRIDGAVIPDHWLDPSAVWEVKCADLSLS 821
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G++ G
Sbjct: 822 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSG 881
Query: 615 GLQDD 619
+D
Sbjct: 882 SDPED 886
>gi|348666069|gb|EGZ05897.1| hypothetical protein PHYSODRAFT_532805 [Phytophthora sojae]
Length = 3954
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 193/416 (46%), Gaps = 61/416 (14%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHS 278
G V P LA + + GK E K+DG+R QIH NG EI FSR+F + +
Sbjct: 524 GTPVSPMLARPTKAYAMVFDRFEGKPFTCEYKYDGERAQIHILPNG-EIAIFSRNFENST 582
Query: 279 E----YGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR 334
E A+S+ ++ +V CI+D E++ D + N+ F Q ++ +R + +
Sbjct: 583 ERFPDVKLAISEATKKKGIVKSCIVDAEVVAVDRATNKRLPF---QILSTRSRKNVKVED 639
Query: 335 ---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLE---TLVPDHGLNSHVR 388
+C +AFD+L++ S + L +R E L+ + + G E +L + ++
Sbjct: 640 IKVPVCIYAFDLLFLNGESFLATPLAKRREKLRDMFEVKPGNFEFATSLDVEDCVDVKNN 699
Query: 389 PQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYI 446
P+ + VD+V F +E + EG+++K L + +EP +RS KWLKLK +Y+
Sbjct: 700 PEA------IDEAVDKVRTFLEEAVRENCEGLMVKTLEKEATYEPANRSHKWLKLKKDYL 753
Query: 447 RA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL 505
G D++ IG ++G G+R G +L+A + PDT + ++GTGLSDE L
Sbjct: 754 DGIGDSADLVPIGAFHGRGKRTGVYGAYLLACYD---PDT--EMYQPITKLGTGLSDEVL 808
Query: 506 DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE--------------SPEKSI 551
+LK KR PS Y + K PDVW E SP+ +
Sbjct: 809 KQFHDQLKEKV----VDKR--PSDYAIGEGIK--PDVWFEASCVWEILGADLSISPKYTA 860
Query: 552 ILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTT 607
+ + ++ + I SLRFPR R+R DK + +L + TT
Sbjct: 861 AIGLVAEDKGI---------SLRFPRFIRIRDDKDTTQATNSSQIADLYRAQGLTT 907
>gi|424811979|ref|ZP_18237219.1| DNA ligase I, ATP-dependent, dnl1, partial [Candidatus
Nanosalinarum sp. J07AB56]
gi|339756201|gb|EGQ39784.1| DNA ligase I, ATP-dependent, dnl1 [Candidatus Nanosalinarum sp.
J07AB56]
Length = 501
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 130/550 (23%), Positives = 256/550 (46%), Gaps = 86/550 (15%)
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVL--QRRQGMIS 121
GL + + + A G S++ V WR+ G+ + A E++ + +Q ++
Sbjct: 4 GLSSKTMVDVISRATGRSEEDITEV----WRE------EGDLGLAAEEMVDGKTQQRLVQ 53
Query: 122 GGLTIKELNDLLDRLASSENRA-------EKISVLSTLIKKTNAQEMKWIIMIILKDLKL 174
LT++E+ LD +AS E A +K+ + L+ ++ +E ++ + +L++++L
Sbjct: 54 KTLTVEEVMQTLDEIASMEEEALESVDVSKKVGKAADLVSASSPREARYAVRNLLQNMRL 113
Query: 175 GISE--------KSIFHEFH-PDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVR 225
G++E ++ F H D + +++T D + V + +D + + ++E+ + V
Sbjct: 114 GVAEGLIRDALAEAFFDGEHVEDIQHAYDLTNDFRQVAKACQDGIENVQELEMELFRPVN 173
Query: 226 PQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMS 285
LA ++ + ++ G+ I+ K+DG R QIH +G E+ F+R D +E +
Sbjct: 174 SMLAKKVESIEEGFEEV-GRPAGIDFKYDGVRAQIHVSGGEVKVFTRRLEDITEQFPDVV 232
Query: 286 KIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR-----DGLSSDRQLCYFA 340
+ +EQN+ + I+D E++ +D + F Q ++K + + L + +
Sbjct: 233 EAVEQNIDAENAIIDTEIIGYDPENDSTVPF---QRLSKRVKRKYDIERLRQEIPVEVRP 289
Query: 341 FDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAH 400
FD++Y+ D S++ Q+ ER E L+ +V+ K R+ LV DH S
Sbjct: 290 FDLIYL-DGSLLQQTYAERLESLRGIVR-EKRRVLRLV-DHVETS--------------- 331
Query: 401 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGY 460
+ ++V +F + N EGI++K + ++++PG R G +KLKP LD+ ++G
Sbjct: 332 SKEKVAEFDQRATSNGHEGIMMKKMDARYKPGKRVGYMVKLKP----VMETLDLAVVGAK 387
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
+ GRR G + + + A + + R+ TGL+D+EL+ + +L+P
Sbjct: 388 WSEGRRSGWLGRLKLG-----AWNEEEQEHEMVGRMATGLTDDELERITDRLEPLV---- 438
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDR 580
V + + DV +E + +S + + Y+LRFPR+
Sbjct: 439 -----------VEEDGR---DVTVEPEVLLEVEYEEIQ----QSPTYESGYALRFPRLKA 480
Query: 581 VRYDKPWHDC 590
R DK D
Sbjct: 481 FRDDKHQADT 490
>gi|225559355|gb|EEH07638.1| DNA ligase [Ajellomyces capsulatus G186AR]
Length = 888
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 145/587 (24%), Positives = 246/587 (41%), Gaps = 123/587 (20%)
Query: 103 GNFPMVAAEVLQRRQGMISGG-LTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNA 158
G+ +VAA+ + M LT++ +++ L +A ++ ++ +KIS + L+ +A
Sbjct: 310 GDLGLVAAKSRSNQPTMFKPKPLTVRGVHEGLLAIAKTQGHGSQEKKISAIKKLLSSADA 369
Query: 159 -------------------QEMKWIIMIILKDLKLGISEKSIF---------HEFH---- 186
E K+II + L+LG++EK++ HE
Sbjct: 370 TLAGKGSKGIDITQNKGGPSEAKFIIRFLEGKLRLGLAEKTVLVALAHAMVAHEVELQGK 429
Query: 187 --PDAEDLFNVTCDLKLVCEKLKDRN------------QRHKRQDIEVGKAVRPQLAMRI 232
P E+L LK V +L + ++ G ++P LA
Sbjct: 430 KAPSTEELGKGEAILKSVYSELPSYEVIIPAMLEHGIFNLKENCKLQPGVPLKPMLAKPT 489
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIH------------------KNGSEI-HYFSRS 273
+ GK E K+DG+R QIH K+G I FSR+
Sbjct: 490 KSITEVLDRFEGKNFTCEYKYDGERAQIHYVAREEMHKYPSTASTLQKDGEGICAIFSRN 549
Query: 274 FLDHSE-YGHAMSKI---IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
D S+ Y + K+ ++Q +LD E + WDT + F Q + + +D
Sbjct: 550 SEDLSKKYPDILGKLENWVKQGTT--SFVLDCETVAWDTVNKKVLPF--QQLMTRKRKDV 605
Query: 330 LSSDRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHV 387
+ D ++ C FAFD+L++ + +L+ER L P +G E + HG
Sbjct: 606 KAEDVKVKVCVFAFDLLFLNGEPTVKMTLRERRARLHDAFTPIEG--EFVFAQHG----- 658
Query: 388 RPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPE 444
+++DE++ E+++ EG+++K L S +EP RS WLK+K +
Sbjct: 659 ----------DTNDLDEIQTLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKD 708
Query: 445 YIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDE 503
Y+ G LD++++G YYG G+R FL+A A +T + F + C +GTG S+
Sbjct: 709 YLAGIGDSLDLVVLGAYYGRGKRTSVYGAFLLA-----AYNTSTQTFQTVCNIGTGFSEA 763
Query: 504 ELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSD 558
L+ + L P P FY ++ K++PDVW E P+ K+ L+++
Sbjct: 764 LLEELHKSLSPLVIDR------PKPFYDHSSVPKDQPDVWFE-PKYVWEVKAADLTLSPR 816
Query: 559 IRTIRSEVFSAP------YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+ E SLRFPR + R DK + + E+
Sbjct: 817 YKAAADEFMGTSNGAGKGISLRFPRYIKSRDDKKPEEATATRQVAEM 863
>gi|211956416|ref|YP_002302485.1| DNA ligase-like protein [Deerpox virus W-1170-84]
gi|115503211|gb|ABI99129.1| DNA ligase-like protein [Deerpox virus W-1170-84]
Length = 562
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 222/488 (45%), Gaps = 47/488 (9%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
L ++++++ L L++ ++I+ L+ L K ++K II++I DL++ K +
Sbjct: 113 LLLEDVDNFLQHLSTLTKENDQINFLNMLAKVCTGNDLKCIILLIKNDLQIKAGIKCVLD 172
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLH 243
HP+A + F + +L+ + + N I V+P LA A K +
Sbjct: 173 SLHPNAYNYFKTSHNLRDIVK--YSINDSLSNVKINPMTPVKPMLADVCESLEKAIDK-Y 229
Query: 244 GKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQNV-LVDRCIL 299
+ E K+DG+R+QIHK + +YFSR+ L H G K++ IL
Sbjct: 230 KDGMYSEVKYDGERVQIHKKDNVYNYFSRNLKPVLTHKIDG--FDKLLTDAFPTAKNFIL 287
Query: 300 DGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKER 359
D E+++ D N F FGS KA+ + + C F FD LY D + ++ +R
Sbjct: 288 DAELIMIDIESNSFLPFGSLGIHKKASYENSVT----CMFIFDCLYYNDNNFMNVPFHKR 343
Query: 360 HELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEG 419
+ L+ + K ++ + S +R +++ +++ I+ EG
Sbjct: 344 RQFLRDNIYEIKNKI--------MLSEIR---------CIYSISDLQIIMSNIIKKGFEG 386
Query: 420 IVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVA 476
I++K + +++PG R WLK+K +Y+ GS D++++G YYG G +GG + FL+
Sbjct: 387 IMIKGVNDEYKPGKRG--WLKIKKDYLENGSMADSADLVVLGSYYGKGSKGGIQSIFLMG 444
Query: 477 LAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNS 536
+ D + ++ C +G D+ L + ++ + P + P ++ N
Sbjct: 445 CYD---SDRMIWKTVTKC---SGHDDKTLQQLQEDME-LIKISREPDKIPK---WLSVNK 494
Query: 537 KERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPWHDCLDVQS 595
PD ++ P + + I T +S+ +A S+RFPR R+R DK W ++
Sbjct: 495 IYYPDFVVKDPRSAPVWEIVGSGFT-KSQYHTADGISIRFPRCQRIRNDKNWISATNLNQ 553
Query: 596 FVELVHSS 603
EL S
Sbjct: 554 LRELYKKS 561
>gi|299755490|ref|XP_001828699.2| DNA ligase I [Coprinopsis cinerea okayama7#130]
gi|298411247|gb|EAU93094.2| DNA ligase I [Coprinopsis cinerea okayama7#130]
Length = 803
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 193/427 (45%), Gaps = 61/427 (14%)
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
+R + G ++P LA + K E K+DG+R QIH+ + + FS
Sbjct: 415 RERCKLTPGIPLKPMLAKPTKAIGEVLDRFENKRFTCEYKYDGERAQIHRLDDGTVGVFS 474
Query: 272 RSFLDHS----EYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR 327
R+ D S + +SK I++N +LD E + D + + F QE+++ R
Sbjct: 475 RNSEDMSKKYPDLVDQLSKCIKKNT--KSFVLDSEAVAIDRTTGKLMPF---QELSRRKR 529
Query: 328 DGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLN 384
+ + ++C FAFD+LY+ +I++ L ER +LL+K + G + G
Sbjct: 530 KDVKVEDIQVRVCIFAFDLLYLNGEPLINKPLVERRDLLRKHFQVVPGEFDFAKSSDG-- 587
Query: 385 SHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKL 441
+ DE++ F +E++++ EG+++K L S +EP RS WLKL
Sbjct: 588 ---------------ESTDEIQTFLEESVKDGCEGLMVKMLESDASNYEPSRRSVNWLKL 632
Query: 442 KPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 500
K +Y+ G LD++++G YYG G+R FL+A D + + C++GTG
Sbjct: 633 KKDYLAGVGDSLDLVVVGAYYGKGKRTNYYGAFLLACY-----DADSEEYQTICKIGTGF 687
Query: 501 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIR 560
SDE L LKP + P ++ +PD+W E K + +T+D+
Sbjct: 688 SDEALQTHYETLKP------LEQTKPRGDIKIGGA---KPDIWFEP--KVVWEVLTADLS 736
Query: 561 TIRSEVFSAP--------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKE 612
S +++A SLRFPR RVR DK D + E+ + Q G +
Sbjct: 737 L--SPIYTAAQGLVEERGISLRFPRFIRVRDDKDADDATAPEQIAEM-YERQSLAQAGSK 793
Query: 613 YGGLQDD 619
G DD
Sbjct: 794 KKGGDDD 800
>gi|239606310|gb|EEQ83297.1| DNA ligase Cdc9 [Ajellomyces dermatitidis ER-3]
Length = 900
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 187/422 (44%), Gaps = 73/422 (17%)
Query: 240 RKLHGKEVVIECKFDGDRIQIHKNG-SEIHYFSRSFLDHSEYGHAMSKIIEQN------- 291
R L GK E K+DG+R QIH EIH ++ + + G + I +N
Sbjct: 507 RFLEGKNFTCEYKYDGERAQIHYVAREEIHKYASTASTLQKDGEGICAIFSRNSEDLSKK 566
Query: 292 ---VL----------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL-- 336
+L +LD E + WD + F Q + + +D + D ++
Sbjct: 567 YPDILGKLESWVKKGTTSFVLDCETVAWDMVNKKVLPF--QQLMTRKRKDVKAEDVKVKV 624
Query: 337 CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
C FAFD+L++ + + +L+ER LL + P +G E + HG
Sbjct: 625 CVFAFDLLFLNGQATVKMTLRERRALLHEAFTPIEG--EFVFAQHG-------------- 668
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDL 452
+++DE++ E+++ EG+++K L S +EP RS WLK+K +Y+ G L
Sbjct: 669 -DTNDLDEIQTLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGIGDSL 727
Query: 453 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 512
D++++G YYG G+R FL+A P+T + F + C +GTG S+ L+ + L
Sbjct: 728 DLVVLGAYYGRGKRTSVYGAFLLAAYN---PNT--QNFETVCNIGTGFSEALLEELHKAL 782
Query: 513 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVF 567
P + PK FY ++ K++PDVW E P+ K+ L+++ + EV
Sbjct: 783 SPLV--IDRPK----PFYDHSSVPKDQPDVWFE-PKYVWEVKAADLTLSPRYKAAADEVM 835
Query: 568 SAP----------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQ 617
SLRFPR + R DK + + E+ ++ GG+
Sbjct: 836 GIASAGSNGTVKGISLRFPRYIKARDDKKPEESTTTRQVAEMYRRQESVSKDTAGKGGVD 895
Query: 618 DD 619
DD
Sbjct: 896 DD 897
>gi|301625480|ref|XP_002941929.1| PREDICTED: DNA ligase 1 [Xenopus (Silurana) tropicalis]
Length = 1040
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 180/388 (46%), Gaps = 65/388 (16%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHS 278
G ++P LA ++ E K+DG+R QIH +NG E+H +SR+ +++
Sbjct: 660 GIPLKPMLAHPTKGIGEVLKRFDEAAFTCEYKYDGERAQIHILENG-EVHIYSRNQENNT 718
Query: 279 -EYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL 336
+Y +S+I + + V CILD E + WD + F + D Q+
Sbjct: 719 TKYPDIISRIPKIKKESVKSCILDTEAVAWDPEKKQIQPFQVLTTRKRKDVDASEIKVQV 778
Query: 337 CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
C +AFD+LY+ S++ + +R +LL+ +S + +GE ++
Sbjct: 779 CVYAFDMLYLNGESLVKEPFAKRRQLLR-------------------DSFLETEGEFMFA 819
Query: 397 --LVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSD 451
+ N DE+ +F ++I++ EG+++K L + +E RS WLKLK +Y+ G
Sbjct: 820 TYMDTSNTDEISEFLDQSIKDSCEGLMVKTLEQDATYEIAKRSHNWLKLKKDYLEGVGDT 879
Query: 452 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 511
LD+++IG Y G G+R G FL+A + D + + C++GTG +DE+L+
Sbjct: 880 LDLVVIGAYLGKGKRTGIYGGFLLA-----SYDEESEEYQTICKIGTGFTDEDLEKHYNY 934
Query: 512 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE--------------SPEKSIILSITS 557
LK + +P S+Y+ +S PD W + SP L +
Sbjct: 935 LKDHVID------SPRSYYRW--DSATEPDHWFDPVQVWEVKCADLSISPVHKAALGLVE 986
Query: 558 DIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
D + I SLRFPR R+R DK
Sbjct: 987 DEKGI---------SLRFPRFLRIRDDK 1005
>gi|156523208|ref|NP_001096018.1| DNA ligase 1 [Bos taurus]
gi|134025125|gb|AAI34519.1| LIG1 protein [Bos taurus]
gi|296477394|tpg|DAA19509.1| TPA: DNA ligase (ATP) 1 [Bos taurus]
Length = 916
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 228/545 (41%), Gaps = 96/545 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ +LA S + +KI V+ L E ++I + L+LG++E+S+
Sbjct: 408 IAQLAGSASTTKKIDVIKGLFVACRHSEARFIARALSGRLRLGLAEQSVLAALAQAVSLT 467
Query: 183 ---HEFHPDAED--------------------LFNVTCDLK-------LVCEKLKDRNQR 212
E P D L C++ ++ E +R
Sbjct: 468 PPSQECPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLERIVPVLLEHGLERLPE 527
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H R + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 528 HCR--LSPGVPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHVLEGGEVKIFS 585
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ Y +S+I + + V ILD E + WD + F + D
Sbjct: 586 RNQEDNTGRYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 645
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 646 AEIQVQVCLYAFDLIYLNGKSLVREPLSRRRQLLRE-------------------NFVET 686
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL + +++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 687 EGEFVFATSLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 746
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + D F + C++GTG SDEE
Sbjct: 747 LEGVGDTLDLVVIGAYLGKGKRAGRYGGFLLA-----SYDEESEEFQAICKLGTGFSDEE 801
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ +L+ P R Y V + PD W++ + K LS++
Sbjct: 802 LEEHHQRLQALVLPTPRSY------------VRADGAVAPDHWLDPSDVWEVKCADLSLS 849
Query: 557 SDIRTIRSEVFSAP-YSLRFPRIDRVRYD-KPWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR D KP Q S Q+G E
Sbjct: 850 PIYPAARGLVDSEKGISLRFPRFIRVREDKKPEQATTSAQVAGLYKKQSQIQNQQGAEPD 909
Query: 615 GLQDD 619
Q++
Sbjct: 910 SEQEE 914
>gi|390938388|ref|YP_006402126.1| ATP-dependent DNA ligase I [Desulfurococcus fermentans DSM 16532]
gi|390191495|gb|AFL66551.1| DNA ligase I, ATP-dependent Dnl1 [Desulfurococcus fermentans DSM
16532]
Length = 610
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 144/566 (25%), Positives = 253/566 (44%), Gaps = 82/566 (14%)
Query: 72 NCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISG--------- 122
L+ A+ ++ +S++A + A + G+ VA ++ R G G
Sbjct: 71 KLLVKAIALATNSSEA------QVEDLAKSLGDLGKVAEQLKSRISGRQQGVTLFSFTQQ 124
Query: 123 --GLTIKELNDLLDRLASSENRAEK---ISVLSTLIKKTNAQEMKWIIMIILKDLKLGIS 177
LT+ ++ D L R+A ++ K I +L+ L+++ + +E K+I+ + L++GI
Sbjct: 125 QPELTVNKVYDTLVRVAMAQGEGSKDLKIRLLAGLLREASPKEAKFIVRFVEGRLRVGIG 184
Query: 178 EKSIFHEF----------HPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDI--EVGKAVR 225
E ++ E +N+ DL V K+ N +++ EVG +R
Sbjct: 185 EATVMDALAITYGGGVAARQVIERAYNLRADLGKVA-KILALNGLEALRNVRPEVGVPIR 243
Query: 226 PQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMS 285
P LA R+ D K+ G + IE K+DG+R QIHK ++ FSR + + +
Sbjct: 244 PMLAERLSDPKEILEKVGG-DAFIEYKYDGERAQIHKKDDKVWIFSRRLENITHQYPDVV 302
Query: 286 KIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARD----GLSSDRQLCYFAF 341
++ ++ I++GE++ +D F QE+ R + + + F F
Sbjct: 303 ELARDHLKAREVIVEGEIVAYDLDTGELKPF---QELMHRKRKHEVRTVLKEYPVKVFLF 359
Query: 342 DVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHN 401
D+LY + L R L ++V ++ + + ++R +
Sbjct: 360 DLLYADGRDYTIEPLPVRRGKLLEIVDRTE--------EFTVAEYIR----------TSD 401
Query: 402 VDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIG 458
V E+EKFF + I + EG+++K L GS ++ G R W+K K +Y D +D++++G
Sbjct: 402 VKELEKFFLKAISDGAEGVMVKALHDGSIYQAGTRGWLWIKFKRDYRSEMIDTVDLVVVG 461
Query: 459 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 518
+YG GRRGG+ L+A A + F + C+VG+G DE+LD + LKPY R
Sbjct: 462 AFYGKGRRGGKYGALLMA-----AYNDEKDVFETVCKVGSGFKDEDLDKLPEILKPYIRD 516
Query: 519 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS-----APYSL 573
+ P+ ++ PDVW+E + I+ + I + + A S+
Sbjct: 517 RKSPRVV----------AEMEPDVWVEPALVAEIIGAELTLSPIHTCAYGRIKSDAGLSI 566
Query: 574 RFPRIDRVRYDKPWHDCLDVQSFVEL 599
RFPR R R DK D VE+
Sbjct: 567 RFPRFIRWRPDKRPEDATTSNELVEM 592
>gi|62637522|ref|YP_227520.1| DNA ligase-like protein [Deerpox virus W-848-83]
gi|115503382|gb|ABI99300.1| DNA ligase-like protein [Deerpox virus W-848-83]
Length = 562
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 222/488 (45%), Gaps = 47/488 (9%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
L ++++++ L L++ ++I+ L+ L K ++K II++I DL++ K +
Sbjct: 113 LLLEDVDNFLQHLSTLTKENDQINFLNMLAKVCTGNDLKCIILLIKNDLQIKAGIKCVLD 172
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLH 243
HP+A + F + +L+ + + N I V+P LA A K +
Sbjct: 173 SLHPNAYNYFKTSHNLRDIVK--YSINDSLSNVKINPMTPVKPMLADVCESLEKAIDK-Y 229
Query: 244 GKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQNV-LVDRCIL 299
+ E K+DG+R+QIHK + +YFSR+ L H G K++ IL
Sbjct: 230 KDGMYSEVKYDGERVQIHKKDNVYNYFSRNLKPVLTHKIDG--FDKLLTDAFPTAKNFIL 287
Query: 300 DGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKER 359
D E+++ DT N F FGS K + + + C F FD LY D + ++ +R
Sbjct: 288 DAELIMIDTKSNSFLPFGSLGIHKKESYENSVT----CMFIFDCLYYNDNNFMNFPFHKR 343
Query: 360 HELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEG 419
+ L+ + K ++ + S +R +++ +++ I+ EG
Sbjct: 344 RQFLRDNIYEIKNKI--------MLSEIR---------CIYSISDLQIIMSNIIKKGFEG 386
Query: 420 IVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVA 476
I++K + +++PG R WLK+K +Y+ GS D++++G YYG G +GG + FL+
Sbjct: 387 IMIKGVNDEYKPGKRG--WLKIKKDYLENGSMADSADLVVLGSYYGKGSKGGIQSIFLMG 444
Query: 477 LAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNS 536
+ D + ++ C +G D+ L + ++ + P + P ++ N
Sbjct: 445 CYD---SDRMIWKTVTKC---SGHDDKTLQQLQEDME-LIKISREPDKIPK---WLSVNK 494
Query: 537 KERPDVWIESPEKSIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPWHDCLDVQS 595
PD ++ P + + I T +S+ +A S+RFPR R+R DK W ++
Sbjct: 495 IYYPDFVVKDPRSAPVWEIVGSGFT-KSQYHTADGISIRFPRCQRIRNDKNWISATNLNQ 553
Query: 596 FVELVHSS 603
EL S
Sbjct: 554 LRELYKKS 561
>gi|390361383|ref|XP_001180844.2| PREDICTED: DNA ligase 1-like [Strongylocentrotus purpuratus]
Length = 942
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 175/373 (46%), Gaps = 41/373 (10%)
Query: 224 VRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDH-SEYG 281
++P LA + E K+DG+R QIH +I+ +SR+ ++ S+Y
Sbjct: 563 LKPMLAHPTKGVSEVLNRFQDTPFTCEYKYDGERAQIHLLESGKINIYSRNQENNTSKYP 622
Query: 282 HAMSKIIEQ-NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFA 340
++++ + V CILD E + WD + F + D Q+C FA
Sbjct: 623 DIIARLSSSVDEKVTSCILDAEAVAWDVERKQILPFQVLSTRKRKDADAGDIKVQVCVFA 682
Query: 341 FDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAH 400
FD+LY+ S++ + L+ER LL+ K +G S+++
Sbjct: 683 FDLLYLNGESLVRKPLRERRSLLRAHFKEVEGEFIF-----------------AKSMISS 725
Query: 401 NVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 457
+VD++ F +E+++ EG+++K L + +E RS WLKLK +Y+ G LDV+++
Sbjct: 726 DVDDIAVFLEESVKGNCEGLMVKTLDKDATYEIARRSHNWLKLKKDYLDGVGDTLDVVVL 785
Query: 458 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 517
GG+ G G+R G FL+A D F S C++GTG +EEL+ K +F+
Sbjct: 786 GGFQGRGKRVGSYGGFLLACY-----DEENEEFQSICKIGTGFKEEELE----KHTKFFK 836
Query: 518 KYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSAP-YS 572
+ K P Y +S PD W ++ + K+ LS++ + V A S
Sbjct: 837 DHLIEKPRPYYNY----DSSVAPDHWFDAVQVWEIKAADLSVSPVHKAAIGIVDPAKGIS 892
Query: 573 LRFPRIDRVRYDK 585
LRFPR R+R DK
Sbjct: 893 LRFPRFIRIRDDK 905
>gi|346326802|gb|EGX96398.1| DNA ligase (Polydeoxyribonucleotide synthase) [Cordyceps militaris
CM01]
Length = 861
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 131/517 (25%), Positives = 214/517 (41%), Gaps = 94/517 (18%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH-----PDAEDLFNVTCDLK 200
K E K+II + L+LG++EK++ HE P D+ LK
Sbjct: 364 KGGPSEAKYIIRFLEGKLRLGLAEKTVLVSLAQAIVCHEADQRGKLPSTSDMEKGESILK 423
Query: 201 LVCEKLKDRN------------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVV 248
V +L + H+ ++ G ++P LA + G+
Sbjct: 424 TVYSELPSYDVIIPAMLSHGILNLHEHCKLQPGVPLKPMLAKPTKAITEVLDRFEGQTFT 483
Query: 249 IECKFDGDRIQIH------------------KNGSE--IHYFSRSFLDHSE-YGHAMSKI 287
E K+DG+R QIH K+ ++ FSR+ D S+ Y ++K+
Sbjct: 484 CEYKYDGERAQIHYVAKDAPQELSQAAPGANKDAAKGVASIFSRNSEDLSKKYPDILAKL 543
Query: 288 ---IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVL 344
++ + +LD E + WDT F K ++C FAFD+L
Sbjct: 544 HSWVKDDT--KSFVLDCETVAWDTEEKTVLPFQQLMTRKKKDVKVEDVKVKVCVFAFDLL 601
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
Y+ V+ +SL+ER ELLQ+ P +G S+ +DE
Sbjct: 602 YLNGQPVVEKSLRERRELLQQAFTPVEGEFSFAT-----------------SMDGQELDE 644
Query: 405 VEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 460
++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G Y
Sbjct: 645 IQVFLDESVKASCEGLMVKMLDGTESGYEPSKRSRNWLKIKKDYLAGVGDSLDLVVLGAY 704
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
YG G+R FL+A P DTY + C +GTG S++ L+ + L
Sbjct: 705 YGRGKRTSVYGAFLLACY-NPGSDTYE----TVCNIGTGFSEQVLEELHAALSAIVIDRP 759
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSAP----Y 571
P FY + ++ +PDVW E P+ K+ L+++ + E
Sbjct: 760 KP------FYAHSTGNQHQPDVWFE-PQYVWEVKTADLTLSPRYKAGCKEGVDPAGGKGI 812
Query: 572 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 608
SLRFPR ++R DK + + E+ T+
Sbjct: 813 SLRFPRFIKIRDDKKPDEATSSRQVAEMYRKQESVTK 849
>gi|261190020|ref|XP_002621420.1| DNA ligase Cdc9 [Ajellomyces dermatitidis SLH14081]
gi|239591248|gb|EEQ73829.1| DNA ligase Cdc9 [Ajellomyces dermatitidis SLH14081]
Length = 903
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 187/422 (44%), Gaps = 73/422 (17%)
Query: 240 RKLHGKEVVIECKFDGDRIQIHKNG-SEIHYFSRSFLDHSEYGHAMSKIIEQN------- 291
R L GK E K+DG+R QIH EIH ++ + + G + I +N
Sbjct: 510 RFLEGKNFTCEYKYDGERAQIHYVAREEIHKYASTASTLQKDGEGVCAIFSRNSEDLSKK 569
Query: 292 ---VL----------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL-- 336
+L +LD E + WD + F Q + + +D + D ++
Sbjct: 570 YPDILGKLESWVKKGTTSFVLDCETVAWDMVNKKVLPF--QQLMTRKRKDVKAEDVKVKV 627
Query: 337 CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
C FAFD+L++ + + +L+ER LL + P +G E + HG
Sbjct: 628 CVFAFDLLFLNGQATVKMTLRERRALLHEAFTPIEG--EFVFAQHG-------------- 671
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDL 452
+++DE++ E+++ EG+++K L S +EP RS WLK+K +Y+ G L
Sbjct: 672 -DTNDLDEIQTLLDESVKASCEGLMVKMLDTEESGYEPSKRSRNWLKVKKDYLAGIGDSL 730
Query: 453 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 512
D++++G YYG G+R FL+A P+T + F + C +GTG S+ L+ + L
Sbjct: 731 DLVVLGAYYGRGKRTSVYGAFLLAAYN---PNT--QNFETVCNIGTGFSEALLEELHKAL 785
Query: 513 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVF 567
P + PK FY ++ K++PDVW E P+ K+ L+++ + EV
Sbjct: 786 SPLV--IDRPK----PFYDHSSVPKDQPDVWFE-PKYVWEVKAADLTLSPRYKAAADEVM 838
Query: 568 SAP----------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQ 617
SLRFPR + R DK + + E+ ++ GG+
Sbjct: 839 GIASAGSNGTVKGISLRFPRYIKARDDKKPEESTTTRQVAEMYRRQESVSKDTAGKGGVD 898
Query: 618 DD 619
DD
Sbjct: 899 DD 900
>gi|340368751|ref|XP_003382914.1| PREDICTED: DNA ligase 1-like [Amphimedon queenslandica]
Length = 780
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 155/659 (23%), Positives = 278/659 (42%), Gaps = 127/659 (19%)
Query: 2 TKTEETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDYFS---ALRLILPSLDR 58
TK ++ + + F I++ R K L + SV S + I L++
Sbjct: 139 TKNQKVPYLAIAKTFQQIEQIS----GRLKIISILTNFLRSVIALSPRETTQCIYLCLNK 194
Query: 59 ERGSY-GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQ 117
+Y GL+ + N LI AL S+ R K A G+ ++A ++
Sbjct: 195 LGPAYKGLELGIGDNILIKAL-----SSATGRNPQQIKAEVA-EKGDLGLIAEASRSTQR 248
Query: 118 GMISGG-LTIKELNDLLDRLA-----SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKD 171
M + LTI + + +A SS+N+ K+ ++ +LI E K++ +
Sbjct: 249 TMFAPPPLTISSVFNKFTEIAKLTGHSSQNK--KVDIIKSLIVSCKDCEAKYLTRSLSGK 306
Query: 172 LKLGISEKSIF----H--EFHPDAEDLF-----------------------NVTCDLK-- 200
L++G++E+S+ H ++ P +D+ N C+L
Sbjct: 307 LRIGLAEQSVLVALAHAVKYTPPGQDIADASQGVNGEKFRKELDAAAAIVKNAYCELPNY 366
Query: 201 -----LVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDG 255
+ E D H + G ++P LA R+ E E K+DG
Sbjct: 367 DILIPALLEHGLDELPNH--CSLTPGIPLKPMLAHPTKGIQEVLRRFEQSEFTCEWKYDG 424
Query: 256 DRIQIHK-NGSEIHYFSRSFLDH-SEYGHAMSKIIE-----------QNVLVDRCILDGE 302
+R QIH + + + +SR+ D+ S+Y +++I + + V C++D E
Sbjct: 425 ERAQIHLLDDNTVQIYSRNQEDNTSKYPDIIARIPQVLKTAGEGEEGEREGVKSCVIDAE 484
Query: 303 MLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHEL 362
+ WD + F + + + Q+C FAFD+L++ ++ + + R EL
Sbjct: 485 AVAWDIEKKQILPFQTLSTRKRKDANISEIKVQVCVFAFDLLFLNGRPLVREPFRVRREL 544
Query: 363 LQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVL 422
L+ K +G + S+ + N+++++ F E+++ EG+++
Sbjct: 545 LKSSFKEIEGEFMFV-----------------QSIDSTNIEDIQSFMDESMKGNCEGLMV 587
Query: 423 K--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAE 479
K D + +E RS WLKLK +Y+ G LD++++GG++G+G+R G+ FL+A
Sbjct: 588 KCLDKDASYEIAKRSRNWLKLKKDYLEGVGDTLDLVVVGGFHGTGKRTGKYGGFLLACY- 646
Query: 480 RPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKER 539
D + C++GTG DEEL+ + LK ++ P S+Y +++
Sbjct: 647 ----DEENEEYQVICKIGTGFKDEELEQHTSYLK------DHVIDGPKSYYSTSDSI--T 694
Query: 540 PDVWIESPE----KSIILSITSDIRTIRSEVFSAP---------YSLRFPRIDRVRYDK 585
PD W E + K+ LS+ S V+ A SLRFPR R+R DK
Sbjct: 695 PDHWFEPVQVWEVKAADLSV--------SPVYPAAAGIIDPEKGISLRFPRFLRIREDK 745
>gi|150401292|ref|YP_001325058.1| ATP-dependent DNA ligase I [Methanococcus aeolicus Nankai-3]
gi|224487887|sp|A6UVC4.1|DNLI_META3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|150013995|gb|ABR56446.1| DNA ligase I, ATP-dependent Dnl1 [Methanococcus aeolicus Nankai-3]
Length = 562
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 231/489 (47%), Gaps = 77/489 (15%)
Query: 125 TIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSI 181
T++E+ L +L++ E ++ +KI +S+++ K++ E +++ +IL+D+++G+S +I
Sbjct: 117 TLEEVYTTLKKLSTIEGGQSQKKKIRHISSILIKSSPIEQRYLARLILEDMRIGMSIPTI 176
Query: 182 FHEF-------HPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIE--VGKAVRPQLAMRI 232
F + E ++ V D+ L+ EKL R + ++++ + + ++P LA I
Sbjct: 177 LGAFSKYYNQPKENLEKIYAVVNDIGLLAEKLAQRCDIYNDEELQLKIFRPIKPMLAQLI 236
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQ-- 290
G + A ++ + E K+DG R+QIHK + + +SR D + +++ +I+E+
Sbjct: 237 GSINDAIIEMGAPQ--FETKYDGARVQIHKKDNIVKIYSRKLEDIT---NSIPEIVEEVK 291
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR-----DGLSSDRQLCYFAFDVLY 345
N+ I++GE + D + R F Q+I + R D + S+ L + FD+LY
Sbjct: 292 NIEAQNLIIEGECVAMDKN-GRPRPF---QDILRRFRRKYNIDSIQSEINLKVYVFDILY 347
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
+ S+I L ER +L+K++ +L SH L N +
Sbjct: 348 YNNKSLIELPLIERRSILEKILTNKHNKLNI--------SH---------KLTTDNEQKA 390
Query: 406 EKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGR 465
+F++ ++ EG+++K+ + + PG R K KP LDV+I G G+
Sbjct: 391 REFYEWSLSIGHEGVMIKNPNAIYTPGSRVRTMYKFKPTL----ESLDVVITKAKMGMGK 446
Query: 466 RGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA 525
R F +A+ + Y + VG+GL++EEL + ++K
Sbjct: 447 RKEWYGSFEIAVKD------YENNLYTIGHVGSGLTEEELHNLTEQIKNI---------- 490
Query: 526 PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
+V N D I P+ I+L I+ + S+ + Y+LRFPR+ R+R DK
Sbjct: 491 ---TIEVIN------DEAIVEPK--IVLEISYE-EIQESDKYKCGYALRFPRVARIRTDK 538
Query: 586 PWHDCLDVQ 594
D ++
Sbjct: 539 SIEDINSIE 547
>gi|194386400|dbj|BAG59764.1| unnamed protein product [Homo sapiens]
Length = 851
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 229/545 (42%), Gaps = 96/545 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 343 IARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLT 402
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 403 PPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPE 462
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 463 HCK--LSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFS 520
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 521 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 580
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 581 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 621
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 622 EGEFVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 681
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + D + C++GTG SDEE
Sbjct: 682 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEE 736
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ LK P R Y V + PD W++ K LS++
Sbjct: 737 LEEHHQSLKALVLPSPRPY------------VRIDGAVIPDHWLDPSAVWEVKCADLSLS 784
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G++ G
Sbjct: 785 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSG 844
Query: 615 GLQDD 619
+D
Sbjct: 845 SDPED 849
>gi|15292189|gb|AAK93363.1| LD41868p [Drosophila melanogaster]
Length = 720
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 183/378 (48%), Gaps = 57/378 (15%)
Query: 246 EVVIECKFDGDRIQIHKN-GSEIHYFSRSFLDHS-EYGHAMSK---IIEQNVLVDRCILD 300
++ E K+DG+R QIH+N EI FSR+ +++ +Y +++ +++ +V I+D
Sbjct: 362 QITCEWKYDGERAQIHRNEKGEISIFSRNSENNTAKYPDLIARSTALLKGDV--KSYIID 419
Query: 301 GEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLK 357
E++ WD + F Q ++ R + + Q+C + FD+LY+ T+++ ++L
Sbjct: 420 SEIVAWDVERKQILPF---QVLSTRKRKNVDIEEIKVQVCVYIFDLLYINGTALVTKNLS 476
Query: 358 ERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRD 417
ER +LL + + +G + +L +++DEV++F +E+I+
Sbjct: 477 ERRKLLLEHFQEVEGEWKFAT-----------------ALDTNDIDEVQQFLEESIKGNC 519
Query: 418 EGIVLKDLG--SKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFL 474
EG+++K L + +E RS WLKLK +Y+ G LD+++IGGY G GRR G FL
Sbjct: 520 EGLMVKTLDEEATYEIAKRSRNWLKLKKDYLSNVGDSLDLVVIGGYKGKGRRTGTYGGFL 579
Query: 475 VALAERPAPDTYPRRFISFCRVGTGLSDEELDA--------VVTKLKPYFRKYEYPKRAP 526
+A DT + S C++GTG +DE+L V + K Y+R Y+ P P
Sbjct: 580 LACY-----DTENEEYQSICKIGTGFTDEDLQTHSEFLGKHVTSAAKSYYR-YD-PSLEP 632
Query: 527 PSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKP 586
+++ + + SP + I R I SLRFPR R+R DK
Sbjct: 633 DHWFEPVQVWEVKCADLSLSPIHRAAIGIVDGERGI---------SLRFPRFIRIRDDKN 683
Query: 587 WHDCLDVQSFVELVHSSN 604
+ D + S +
Sbjct: 684 SENATDANQVAHMYQSQD 701
>gi|194390694|dbj|BAG62106.1| unnamed protein product [Homo sapiens]
Length = 888
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 229/545 (42%), Gaps = 96/545 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 380 IARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLT 439
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 440 PPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPE 499
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 500 HCK--LSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFS 557
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 558 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 617
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 618 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 658
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 659 EGEFVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 718
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + D + C++GTG SDEE
Sbjct: 719 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEE 773
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ LK P R Y V + PD W++ K LS++
Sbjct: 774 LEEHHQSLKALVLPSPRPY------------VRIDGAVIPDHWLDPSAVWEVKCADLSLS 821
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G++ G
Sbjct: 822 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSG 881
Query: 615 GLQDD 619
+D
Sbjct: 882 SDPED 886
>gi|194373981|dbj|BAG62303.1| unnamed protein product [Homo sapiens]
Length = 612
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 136/539 (25%), Positives = 228/539 (42%), Gaps = 88/539 (16%)
Query: 135 RLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF------------ 182
RL S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 106 RLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLTPP 165
Query: 183 -HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQRHK 214
EF P D L C+ + ++ E +R H
Sbjct: 166 GQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHC 225
Query: 215 RQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRS 273
+ + G ++P LA ++ E K+DG R QIH G E+ FSR+
Sbjct: 226 K--LSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRN 283
Query: 274 FLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS 331
D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 284 QEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASE 343
Query: 332 SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
Q+C +AFD++Y+ S++ + L R +LL++ + V +G
Sbjct: 344 IQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVETEG 384
Query: 392 EPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIR 447
E + SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+
Sbjct: 385 EFVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLD 444
Query: 448 A-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 506
G LD+++IG Y G G+R G FL+A + + + + + C++GTG SDEEL+
Sbjct: 445 GVGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELH-----AICKLGTGFSDEELE 499
Query: 507 AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTI 562
LK P V + PD W++ K LS++
Sbjct: 500 EHHQSLKALVLPSPRP--------YVRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYPAA 551
Query: 563 RSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
R V S SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 552 RGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 610
>gi|119572702|gb|EAW52317.1| ligase I, DNA, ATP-dependent, isoform CRA_b [Homo sapiens]
Length = 889
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 229/545 (42%), Gaps = 96/545 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 381 IARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLT 440
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 441 PPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPE 500
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 501 HCK--LSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFS 558
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 559 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 618
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 619 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 659
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 660 EGEFVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 719
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + D + C++GTG SDEE
Sbjct: 720 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEE 774
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ LK P R Y V + PD W++ K LS++
Sbjct: 775 LEEHHQSLKALVLPSPRPY------------VRIDGAVIPDHWLDPSAVWEVKCADLSLS 822
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G++ G
Sbjct: 823 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSG 882
Query: 615 GLQDD 619
+D
Sbjct: 883 SDPED 887
>gi|324506408|gb|ADY42738.1| DNA ligase 1 [Ascaris suum]
Length = 692
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 131/527 (24%), Positives = 222/527 (42%), Gaps = 103/527 (19%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHP--DAE 190
+ + A + +K V+ TL+ E ++++ + L++G++E+S+ A
Sbjct: 193 IAKAAGQSSMTKKTDVIKTLLISCRDVEARYLVRCLGGKLRIGLAEQSVLVALANAFTAN 252
Query: 191 DLFNVTCDLKLVCEKLKDRNQR-------------------------------HKRQDIE 219
+L LKL EKLK++ H+ +
Sbjct: 253 ELSKK--GLKLSGEKLKEKQAEDVLMLKTTYCECPNYDLIISTALAEGGLSSLHEHCKLS 310
Query: 220 VGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS- 278
G ++P LA ++ + E K+DG+R QIH + FSRS D++
Sbjct: 311 PGIPLKPMLAFPTKGIGEVMKRFGSAQFACEYKYDGERGQIHFGSFGVKIFSRSQEDNTG 370
Query: 279 EYGHAMSKIIEQNVLVDRC-ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL- 336
+Y ++I E +C + D E++ WDT F +I + +SD ++
Sbjct: 371 KYPDIAARIHECFDDETKCFVADSEIVAWDTVQKSILPF----QILSTRKRKNASDSEIK 426
Query: 337 ---CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEP 393
C F FD+LY S++ ++R E+L+ K +G
Sbjct: 427 VKVCVFMFDLLYWNGESLVKYPFRKRREMLRSHFKEVEGCF------------------- 467
Query: 394 CWSLV--AHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA- 448
C++L + DE+ +F E I+ EG+++K D + +E RS WLKLK +Y+ +
Sbjct: 468 CFALSKDTEDTDEISEFLDEAIKGNCEGLMVKTLDTDATYEIAKRSHNWLKLKKDYLDSV 527
Query: 449 GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAV 508
G LD+++IGGY G+G+R G +L+A + PD+ + S C++GTGL D++L
Sbjct: 528 GDTLDLVVIGGYCGTGKRTGVYGGYLLACYD---PDS--EEYQSICKIGTGLKDDDLSTQ 582
Query: 509 --------VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESP----EKSIILSIT 556
+ K +PY+ + +S PD W E K+ LSI+
Sbjct: 583 FDQFASLRIEKARPYY----------------SYDSSLEPDHWFEPSVVWEVKAADLSIS 626
Query: 557 SDIRTIRSEV-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
R V SLRFPR R+R DK + + E+ S
Sbjct: 627 PKHHAARGIVDPEKGISLRFPRFIRIRDDKKPEEATSAEQVAEMYRS 673
>gi|73669404|ref|YP_305419.1| DNA ligase (ATP) [Methanosarcina barkeri str. Fusaro]
gi|121731261|sp|Q46BA3.1|DNLI2_METBF RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 2
gi|72396566|gb|AAZ70839.1| DNA ligase (ATP) [Methanosarcina barkeri str. Fusaro]
Length = 568
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 210/463 (45%), Gaps = 63/463 (13%)
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE----KSIFHEFHPDA---EDLFNVTC 197
KI L L + +E K+I + L++L++G+ E +I F E F VT
Sbjct: 143 KIKNLQFLFTSSTPREAKYISRLALEELRIGVGEGVVRDAIAKAFSVPVDVVEHAFMVTN 202
Query: 198 DLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGD 256
DL +V KD + + IE+ + ++ L+ D A +++ KE IE KFDG
Sbjct: 203 DLGIVAATAKDGGVEALESLGIEINRPIKMMLSQISPDIVADIKEM--KEAAIEWKFDGA 260
Query: 257 RIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEF 316
R+Q+HK G + FSR + + + +II ++V + ILDGE + D + R F
Sbjct: 261 RVQVHKAGDSVMLFSRKLENVTNSLPDLVEIIRKHVKAESAILDGEAVAVDEN-GRPRAF 319
Query: 317 GSNQEIAKAARDGLSSDRQLCYFA-----FDVLYVGDTSVIHQSLKERHELLQKVVKPSK 371
QEI K R + + FD++Y+ ++I L ER + L+ V+ S
Sbjct: 320 ---QEILKRFRRKYDVEEKALGIPIQLNLFDIMYLNGKTLIDLPLIERRKALESCVESSV 376
Query: 372 GRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEP 431
+++ D ++ ++D +EK +KE ++ EG+++K+ S + P
Sbjct: 377 EDSKSISVDK--------------QVITGDLDLIEKIYKEALDAGHEGVMVKNPNSFYSP 422
Query: 432 GDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFI 491
G R WLK KP LD++++G +G GRR + + VA + P T RF+
Sbjct: 423 GKRGKNWLKKKPLM----ETLDLVVVGAEWGFGRRANLLGSYTVACYD---PKTL--RFL 473
Query: 492 SFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSI 551
+VGTGL+D++L + L E + + RP + +E + I
Sbjct: 474 QVGKVGTGLTDDQLKELTEILSGLMEGGE-----AGGIFAI------RPKIVLEIAFEEI 522
Query: 552 ILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQ 594
+S + + ++LRFPR R+R DK + +Q
Sbjct: 523 ----------QKSPNYDSGFALRFPRFIRIRDDKDPEEADTIQ 555
>gi|206901484|ref|YP_002250496.1| thermostable DNA ligase [Dictyoglomus thermophilum H-6-12]
gi|224487883|sp|B5YD88.1|DNLI_DICT6 RecName: Full=Probable DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
gi|206740587|gb|ACI19645.1| thermostable DNA ligase [Dictyoglomus thermophilum H-6-12]
Length = 582
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 235/506 (46%), Gaps = 66/506 (13%)
Query: 124 LTIKE-LNDLLD--RLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ E N L D L+ + K++ L+ LI Q K+++ I+L L+LG+ E +
Sbjct: 105 LTVVETFNTLYDIANLSGEGSVDAKVNRLAFLINSLTPQGGKYLVRIVLGKLRLGVGEPT 164
Query: 181 IFHEF----------HPDAEDLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQLA 229
I P E FN+T DL V + + + KR ++VG+ +R LA
Sbjct: 165 IMDALSFAKVKDKGLRPFIERAFNITSDLGYVAKVFWEGGVEALKRIKVQVGRPIRMALA 224
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGHAMSKII 288
R+ A ++L GK +E KFDG R QIHK + + FSR+ D++ + + ++
Sbjct: 225 ERVSRAEEIIKRL-GK-CAVEPKFDGFRCQIHKKENSVRIFSRNLEDNTYMFPDLVEAVL 282
Query: 289 EQNVLVDR-CILDGEMLVWDTSLNRFAEFG-SNQEIAKAARDGLSSDRQLCYFAFDVLYV 346
+Q DR I++GE + ++ F F + Q K + L FAFD+LY+
Sbjct: 283 KQ--FPDRDVIIEGEAISYNPETGEFYPFQVTVQRKRKYNISEMVELYPLQLFAFDILYL 340
Query: 347 -GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
G+ + ++ R +L + +V+ K + +++ ++ E+
Sbjct: 341 DGEDTTSLPYIRRRQKLEEALVEGEKISITK-------------------NIITNDPKEI 381
Query: 406 EKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSG 464
+ FF+E I EGIV K L + ++ G R+ W+KLK Y +D +D +I+G + G G
Sbjct: 382 QSFFEECITEGLEGIVAKRLDAPYQAGMRNFNWIKLKRSYQGHLADTVDCVILGYFKGRG 441
Query: 465 RRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKR 524
R A+F + D F + ++GTG ++EE K + + + KR
Sbjct: 442 HR----AKFGIGALLVGVYDDERDLFKTIAKIGTGPTEEEW----VKFREILDEIKVEKR 493
Query: 525 APPSFYQVTNNSKE--RPDVWIESPEKSIILS---IT-SDIRTIRSEVFSAPYSLRFPRI 578
NN + PDVW+E P+ +++ IT S + T E+ Y+LRFPR+
Sbjct: 494 P--------NNVESFIEPDVWVE-PKYVVVVQADEITRSPVHTCGRELDGLGYALRFPRV 544
Query: 579 DR-VRYDKPWHDCLDVQSFVELVHSS 603
VR DK +D V+ +E+ +
Sbjct: 545 QGFVREDKGPYDATTVKEILEMFRNQ 570
>gi|195166094|ref|XP_002023870.1| GL27179 [Drosophila persimilis]
gi|194106030|gb|EDW28073.1| GL27179 [Drosophila persimilis]
Length = 788
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/507 (24%), Positives = 213/507 (42%), Gaps = 68/507 (13%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
L + E+ LL +L E+ +L L KK +++ I ++ +DL++ + I
Sbjct: 123 LYLHEVEKLLTQLEERTKEDEQTELLQELCKKATDLDLRTFIRLVKQDLRINARARHILD 182
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ--------------DIEVGKAVRPQLA 229
F PDA + + DL + E+ + + Q I+V + P LA
Sbjct: 183 AFGPDAYPAYQSSRDLSAIVEQFSGKGNKTSTQGQVKKTKKVGLSGGGIQVMTPISPMLA 242
Query: 230 MRIGDAHAAWRK----LHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGH 282
A++K L+G E K+DG+R+QIHK G+E +FSR+ +DH +
Sbjct: 243 NACKSVEEAFKKSPSGLYG-----EVKYDGERVQIHKQGTEFKFFSRNLKPVMDH-KIKA 296
Query: 283 AMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFD 342
I ILD E+++ DT FG+ A + + +C F FD
Sbjct: 297 LKDHIPRAFPGAGDMILDSEIILVDTESGAMLPFGT----LGAHKKQTFVNASVCLFVFD 352
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
+ + +R ++L++ + P L S+V + S
Sbjct: 353 CILYDGEDLTQLEFHKRRKILEENINP-------------LKSYV----QLSESQFLKTK 395
Query: 403 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGG 459
+E+ + + EG+VLK ++PG R+ WLK+K +Y+ G D++++G
Sbjct: 396 NELAMMTAKVLHANLEGVVLKSPNGIYQPGKRN--WLKVKKDYLFEGKMADTADLVVLGA 453
Query: 460 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSD---EELDAVVTKLKPYF 516
+YGSG++GG ++ FL+ D R + + +V +GL D EE+ + KL
Sbjct: 454 WYGSGKKGGVLSIFLMGCY-----DARDRLWKTVTKVHSGLDDATNEEIHGSLMKLTERA 508
Query: 517 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 576
+ P + PDV + P + IT T +A S+RFP
Sbjct: 509 DANKTPN-------WLLCKKSLVPDVLAKDPASMPVWEITGAEFTKSEAHTAAGISIRFP 561
Query: 577 RIDRVRYDKPWHDCLDVQSFVELVHSS 603
RI R+R DK + D+ +L +S
Sbjct: 562 RITRLRSDKTAKEANDLAHLEDLYDAS 588
>gi|4557719|ref|NP_000225.1| DNA ligase 1 [Homo sapiens]
gi|118773|sp|P18858.1|DNLI1_HUMAN RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|21780372|gb|AAM77697.1|AF527418_1 ligase I, DNA, ATP-dependent [Homo sapiens]
gi|187143|gb|AAA59518.1| DNA ligase I [Homo sapiens]
gi|80474360|gb|AAI08319.1| Ligase I, DNA, ATP-dependent [Homo sapiens]
gi|119572701|gb|EAW52316.1| ligase I, DNA, ATP-dependent, isoform CRA_a [Homo sapiens]
gi|189054890|dbj|BAG36885.1| unnamed protein product [Homo sapiens]
Length = 919
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 229/545 (42%), Gaps = 96/545 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 411 IARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLT 470
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 471 PPGQEFPPAMVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPE 530
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 531 HCK--LSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFS 588
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 589 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 648
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 649 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 689
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 690 EGEFVFATSLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 749
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + D + C++GTG SDEE
Sbjct: 750 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEE 804
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ LK P R Y V + PD W++ K LS++
Sbjct: 805 LEEHHQSLKALVLPSPRPY------------VRIDGAVIPDHWLDPSAVWEVKCADLSLS 852
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G++ G
Sbjct: 853 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSG 912
Query: 615 GLQDD 619
+D
Sbjct: 913 SDPED 917
>gi|217967169|ref|YP_002352675.1| ATP-dependent DNA ligase I [Dictyoglomus turgidum DSM 6724]
gi|226738221|sp|B8DZX8.1|DNLI_DICTD RecName: Full=Probable DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
gi|217336268|gb|ACK42061.1| DNA ligase I, ATP-dependent Dnl1 [Dictyoglomus turgidum DSM 6724]
Length = 582
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 137/509 (26%), Positives = 227/509 (44%), Gaps = 80/509 (15%)
Query: 124 LTIKELNDLLDRLA--SSENRAE-KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ E + L +A S E + K++ L+ LI Q K+++ I+L L+LG+ E +
Sbjct: 105 LTVVETFNTLFEIANLSGEGSVDAKVNRLAFLINSLTPQGGKYLVRIVLGKLRLGVGEPT 164
Query: 181 IF----------HEFHPDAEDLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQLA 229
+ P E FN+T DL V + + + K+ +EVGK +R LA
Sbjct: 165 VMDALSFAKVKDKSLRPFIERAFNITSDLGYVAKVFWEGGIEALKKIKVEVGKPIRMALA 224
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE 289
R+ ++L GK IE KFDG R QIHK + + FSR+ D++ + + +
Sbjct: 225 ERVSKVEEIVKRL-GK-CAIEPKFDGFRCQIHKKENNVRIFSRNLEDNTHMFPDLVEAVL 282
Query: 290 QNVLVDRCILDGEMLVWDTSLNRFAEFG-SNQEIAKAARDGLSSDRQLCYFAFDVLYVGD 348
+ I++GE + ++ F F + Q K + L FAFD+LY+
Sbjct: 283 KQFSDKNVIIEGEAISYNPETGEFYPFQVTVQRKRKYNISEMVELYPLQLFAFDILYLNG 342
Query: 349 TSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW---SLVAHNVDEV 405
+ R + L++ + +GE + +++ ++ E+
Sbjct: 343 EDITSLPYIRRRQKLEEAIS---------------------EGEKIFVTKNIITNDPKEI 381
Query: 406 EKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSG 464
+ FF+E I EGIV K L + ++ G R+ W+KLK Y +D +D +I+G + G G
Sbjct: 382 QAFFEECITEGLEGIVAKRLDAPYQAGIRNFNWIKLKRSYQGHLADTVDCVILGYFKGRG 441
Query: 465 RRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE-------LDAVVTKLKPYFR 517
R A+F + D F + ++GTG ++EE LD + + KP
Sbjct: 442 HR----AKFGIGALLVGVYDDERDLFKTVAKIGTGPTEEEWVRFREVLDEIKLESKP--- 494
Query: 518 KYEYPKRAPPSFYQVTNNSKE--RPDVWIESPEKSIILS---IT-SDIRTIRSEVFSAPY 571
NN + PDVW+E P+ +++ IT S + T E+ Y
Sbjct: 495 ----------------NNVESLIEPDVWVE-PKYVVVIQADEITRSPVHTCGRELDGLGY 537
Query: 572 SLRFPR-IDRVRYDKPWHDCLDVQSFVEL 599
+LRFPR I VR DK +D V+ +E+
Sbjct: 538 ALRFPRVIGFVREDKGPYDATTVKEILEM 566
>gi|297277489|ref|XP_002801368.1| PREDICTED: DNA ligase 1 isoform 4 [Macaca mulatta]
Length = 851
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 228/545 (41%), Gaps = 96/545 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++ +S+
Sbjct: 343 IARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAGQSVLAALSQAVSLT 402
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 403 PPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPE 462
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 463 HCK--LSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFS 520
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 521 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 580
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 581 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 621
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 622 EGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 681
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + D + C++GTG SDEE
Sbjct: 682 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEE 736
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ LK P R Y V + PD W++ K LS++
Sbjct: 737 LEEHHQSLKALVLPSPRPY------------VRIDGAVTPDHWLDPSAVWEVKCADLSLS 784
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G++ G
Sbjct: 785 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSG 844
Query: 615 GLQDD 619
+D
Sbjct: 845 SDPED 849
>gi|392578982|gb|EIW72109.1| hypothetical protein TREMEDRAFT_25666 [Tremella mesenterica DSM
1558]
Length = 671
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 136/555 (24%), Positives = 240/555 (43%), Gaps = 108/555 (19%)
Query: 123 GLTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEK 179
LT+ + L +A + A +K+ +++ L+ E K+I+ + L++G+++K
Sbjct: 165 ALTVPYVFQSLTEIAKASGNASQNKKVGIINKLLAACQGTEAKFIVRSLEGKLRIGLADK 224
Query: 180 SI------------------------FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKR 215
++ E + +++ + L+ L +
Sbjct: 225 TLVVALAHAMVLKRDKRIGGEELAKKLEEGADIVKSIYSELPNYDLIIPALMKGGIEGLQ 284
Query: 216 QDIEV--GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFS 271
++ ++ G ++P LA + GKE E K+DG+R Q+H ++G+ I FS
Sbjct: 285 ENCKLTPGVPLKPMLAKPTKAITEVLDRFEGKEFTCEYKYDGERAQVHLLEDGT-IAVFS 343
Query: 272 RSFLDHSEYGHAMSKIIEQNVLVDRCI--------LDGEMLVWDTSLNRFAEFGSNQEIA 323
R+ + S ++EQ + RCI +D E + +D + F Q+++
Sbjct: 344 RNSENMS---AKYPDLVEQ---LPRCIKEGVKSFVIDAEAVAYDLEQKKLLPF---QDLS 394
Query: 324 KAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPD 380
+ R + ++ ++ FAFD+LY+ S++ + LKER LLQK +P V
Sbjct: 395 RRKRKDVRTEDITVRVHLFAFDLLYLNGESLLQKELKERRSLLQKHFQPIPSEFAFAVSS 454
Query: 381 HGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGK 437
+E++ F +E++++ EG+++K L S +EP RS
Sbjct: 455 D-----------------CTTTEEIQSFLEESVKDGCEGLMVKMLTTQSSTYEPSRRSIN 497
Query: 438 WLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRV 496
WLKLK +Y+ G LD+++IG YYG G+R FL++ + PD+ + + C++
Sbjct: 498 WLKLKKDYLSGIGDSLDLVVIGAYYGKGKRTSVYGAFLLSCYD---PDS--EHYQTICKI 552
Query: 497 GTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKE----RPDVWIESPEKSII 552
GTG S+E L LKP QV E +PDVW E K +
Sbjct: 553 GTGFSEEILIKFHEMLKPL-------------ELQVVRGDIEVGGAKPDVWFEP--KIVW 597
Query: 553 LSITSDIRTIRSEVFSAPY--------SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSN 604
+T+D+ S +++A + SLRFPR R+R DK + + E +
Sbjct: 598 EVLTADLSL--SPIYTAAHGLVDSRGISLRFPRFIRIREDKSSDEATTSEQVSEF-YQRQ 654
Query: 605 GTTQKGKEYGGLQDD 619
T K GG DD
Sbjct: 655 VTAGGKKNVGGEGDD 669
>gi|254168973|ref|ZP_04875812.1| DNA ligase I, ATP-dependent superfamily [Aciduliprofundum boonei
T469]
gi|197622079|gb|EDY34655.1| DNA ligase I, ATP-dependent superfamily [Aciduliprofundum boonei
T469]
Length = 590
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 135/534 (25%), Positives = 237/534 (44%), Gaps = 69/534 (12%)
Query: 103 GNFPMVAAEVLQR-RQGMI-----SGGLTIKELNDLLDRLASSE---NRAEKISVLSTLI 153
G+ VA E +++ RQ + LT++++ + +++A +E ++ KI +L+ L+
Sbjct: 88 GDLGSVAEEAIKKKRQTTLFSFEEEKNLTVEKVYENFEKIAKAEGPGSQDRKIQLLAELL 147
Query: 154 KKTNAQEMKWIIMIILKDLKLGISEKSIF----------HEFHPDAEDLFNVTCDLKLVC 203
E K+I+ + L+LGI++ +I E E +N+ DL +
Sbjct: 148 NLAKPIEAKYIVRTVEGKLRLGIADMTILDALSIAYGGTKELRSLVERAYNIHPDLGYIA 207
Query: 204 EKL-KDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK 262
+KL K+ K IE+G +R LA R+ K+ GK E K+DG RIQ H
Sbjct: 208 KKLAKEGIDGVKDIKIELGIPIRAMLAERLPSLEEILAKMGGK-AAFEYKYDGMRIQGHV 266
Query: 263 NGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEF------ 316
++ +SR + + + + +++ I DGE + D F
Sbjct: 267 GKDKVWLYSRRLENLTSQFPDVVEALKEAFQGKEGIFDGEAVPVDIHTGELLPFQVVSHR 326
Query: 317 -GSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLE 375
G EI KA D + F FDV+Y+ + + ER E+L++V+ P+ E
Sbjct: 327 RGRKYEIEKAI-----EDYPVVLFLFDVIYLDGEDLTSKPYPERREILERVINPT----E 377
Query: 376 TLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGD 433
+ H +V+ ++ E+ +FF + IE+ EG+V K +G S + G
Sbjct: 378 RVKFAH--------------RIVSSDIGEIREFFNKAIEDGCEGLVAKSIGEESIYRAGA 423
Query: 434 RSGKWLKLKPEY-IRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFIS 492
R W+K K +Y + G +D++++G + G G+R G L+A A P D RF +
Sbjct: 424 REFLWIKYKRDYKVEMGDTVDLVVVGAFAGKGKRKGTYGALLMA-AYNPEKD----RFET 478
Query: 493 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII 552
C++G+G +DE+L + K F + + P + ++ + P V +E I
Sbjct: 479 VCKLGSGFTDEQLAYLPRK----FEDLKIENKHPRVWSEMDADYWFVPKVVLEVIGAEIT 534
Query: 553 LSITSDIRTIRSEVF--SAPYSLRFPRID-RVRYDKPWHDCLDVQSFVELVHSS 603
LS T T +V ++RFPR R R DK + + +E+ +
Sbjct: 535 LSPT---HTCARDVIEKGTGLAIRFPRFTGRWRDDKSPEEATTTKELIEMYENQ 585
>gi|195382489|ref|XP_002049962.1| GJ20456 [Drosophila virilis]
gi|194144759|gb|EDW61155.1| GJ20456 [Drosophila virilis]
Length = 667
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 189/419 (45%), Gaps = 63/419 (15%)
Query: 208 DRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG-SE 266
D + +R + G +RP LA + G + E K+DG+R QIH N E
Sbjct: 271 DIKELQERCPMHPGMPLRPMLAQPTKGVLEVLERFSGMHITCEWKYDGERAQIHLNELGE 330
Query: 267 IHYFSRSFLDHS-EYGHAMSKIIEQNVL---VDRCILDGEMLVWDTSLNRFAEFGSNQEI 322
I FSR+ +++ +Y +++ ++ L V I+D E++ WD + F
Sbjct: 331 ISIFSRNSENNTPKYPDLIAR--SKSFLKTDVQSYIIDSEIVAWDIERKQILPFQILSTR 388
Query: 323 AKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHG 382
+ D Q+C + FD+L++ S++ + L R ++L + + +G
Sbjct: 389 KRKNVDIEDIKVQVCVYIFDLLFINGVSLVTKPLSLRRKMLFEHFQEVEG---------- 438
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLK 440
Q + +L +++DEV++F +E+I+ EG+++K L + +E RS WLK
Sbjct: 439 -------QWKFATALDTNDMDEVQQFLEESIKGNCEGLMVKTLEEEATYEIAKRSRNWLK 491
Query: 441 LKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 499
LK +Y+ G LD+++IGGY G GRR G FL+A DT + S C++GTG
Sbjct: 492 LKKDYLSNVGDSLDLVVIGGYKGKGRRTGTYGGFLLACY-----DTENEEYQSICKIGTG 546
Query: 500 LSDEEL--------DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE--- 548
+D++L V K YFR Y+ PS PDVW E +
Sbjct: 547 FTDDDLRLHSEFFNKHVTGSAKSYFR-YD------PSL---------EPDVWFEPVQVWE 590
Query: 549 -KSIILSITSDIRTIRSEVFSAP--YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSN 604
K LS+ S I + A SLRFPR R+R DK + D + S +
Sbjct: 591 VKCADLSL-SPIHRASIGIVDAERGISLRFPRFIRIRDDKSPENATDANQVAHMYKSQD 648
>gi|297277487|ref|XP_002801367.1| PREDICTED: DNA ligase 1 isoform 3 [Macaca mulatta]
Length = 888
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 228/545 (41%), Gaps = 96/545 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++ +S+
Sbjct: 380 IARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAGQSVLAALSQAVSLT 439
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 440 PPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPE 499
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 500 HCK--LSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFS 557
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 558 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 617
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 618 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 658
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 659 EGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 718
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + D + C++GTG SDEE
Sbjct: 719 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEE 773
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ LK P R Y V + PD W++ K LS++
Sbjct: 774 LEEHHQSLKALVLPSPRPY------------VRIDGAVTPDHWLDPSAVWEVKCADLSLS 821
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G++ G
Sbjct: 822 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSG 881
Query: 615 GLQDD 619
+D
Sbjct: 882 SDPED 886
>gi|56967028|pdb|1X9N|A Chain A, Crystal Structure Of Human Dna Ligase I Bound To
5'-Adenylated, Nicked Dna
Length = 688
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 228/545 (41%), Gaps = 96/545 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 180 IARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLT 239
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 240 PPGQEFPPAXVDAGKGKTAEARKTWLEEQGXILKQTFCEVPDLDRIIPVLLEHGLERLPE 299
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 300 HCK--LSPGIPLKPXLAHPTRGISEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFS 357
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 358 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 417
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 418 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 458
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +++++ +F ++++++ EG+ +K D+ + +E RS WLKLK +Y
Sbjct: 459 EGEFVFATSLDTKDIEQIAEFLEQSVKDSCEGLXVKTLDVDATYEIAKRSHNWLKLKKDY 518
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + D + C++GTG SDEE
Sbjct: 519 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEE 573
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ LK P R Y V + PD W++ K LS++
Sbjct: 574 LEEHHQSLKALVLPSPRPY------------VRIDGAVIPDHWLDPSAVWEVKCADLSLS 621
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G++ G
Sbjct: 622 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSG 681
Query: 615 GLQDD 619
+D
Sbjct: 682 SDPED 686
>gi|403412845|emb|CCL99545.1| predicted protein [Fibroporia radiculosa]
Length = 826
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 224/511 (43%), Gaps = 90/511 (17%)
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF----HEFHPDAEDLF 193
SS+N+ K+S+++ L+ E K+I+ + L++G +E+++ H F ++
Sbjct: 332 SSQNK--KVSIITKLLAACQGSEAKYIVRSLEGKLRIGNAERTVLVALAHAFVLAEQERA 389
Query: 194 NVTCDLKLVCEKLKDR--------------------------NQRHKRQDIEVGKAVRPQ 227
N + + + +L++ ++ ++ + G ++P
Sbjct: 390 NKKINSEKLTARLEESANVVKSVYSELPTYDLVVPALLEAGIDKLREKCKLTPGVPLKPM 449
Query: 228 LAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHSE-YGHAMS 285
LA + K E K+DG+R Q+HK + FSR+ D S+ Y M
Sbjct: 450 LAKPTKAIGEVLDRFENKRFTCEYKYDGERAQVHKLEDGTVGVFSRNSEDMSKKYPDLME 509
Query: 286 KIIEQ-NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAF 341
++ N +LD E + D + F QE+++ R + + ++C FAF
Sbjct: 510 QLPNCINESTKSFVLDAEAVAIDKDTGKLMPF---QELSRRKRKDVKVEDIKVRVCLFAF 566
Query: 342 DVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHN 401
D+LY+ ++ +SL ER LL+ + G D +S
Sbjct: 567 DLLYLNGEPLLQKSLAERRLLLRDHFQRVPGEF-----DFAKSSDC------------ET 609
Query: 402 VDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 457
+E++ F +E++++ EG+++K L S +EP RS WLKLK +Y+ G LD++++
Sbjct: 610 TEEIQAFLEESVKDGCEGLMVKMLEEDPSFYEPSRRSVNWLKLKKDYLAGVGDSLDLVVV 669
Query: 458 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 517
G YYG G+R FL+A D + + C++GTG S+E L A LKP
Sbjct: 670 GAYYGKGKRTNVYGAFLLACY-----DADAEEYQTICKIGTGFSEEALQAHHDTLKP--- 721
Query: 518 KYEYPK-RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP------ 570
E K RA +PDVW+E K + +T+D+ S +++A
Sbjct: 722 -LETTKARADIKI------GGAKPDVWLEP--KVVWEVLTADLSL--SPIYTAAQGLVEE 770
Query: 571 --YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
SLRFPR R+R DK D + E+
Sbjct: 771 RGISLRFPRFIRIRDDKSADDATGPEQIAEM 801
>gi|76802375|ref|YP_327383.1| DNA ligase (ATP) [Natronomonas pharaonis DSM 2160]
gi|121729332|sp|Q3IPX0.1|DNLI_NATPD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|76558240|emb|CAI49828.1| DNA ligase (ATP) [Natronomonas pharaonis DSM 2160]
Length = 548
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 137/503 (27%), Positives = 227/503 (45%), Gaps = 90/503 (17%)
Query: 113 LQRRQGMISGG-------LTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMK 162
L +QG+ + G LT+ + + L LA++ K L L + E +
Sbjct: 100 LGGQQGLAAFGGGTDREALTVSGVEETLQALAAAAGDGSTDAKRDRLFDLFNRAEPTEAR 159
Query: 163 WIIMIILKDLKLGISEKSI-------FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKR 215
++ ++L ++++G+ E ++ F PD E V D LV E +D +
Sbjct: 160 FLARLVLGEMRVGVGEGTVRDAIAAAFEVPEPDVERALQVANDCGLVAETARD-DGAAGL 218
Query: 216 QDIE--VGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRS 273
DI VG+ V+ LA + G A A + +E K+DG R+Q+H +G FSR+
Sbjct: 219 DDIGLVVGRPVKAMLA-QAGTAVEALDEW--GTAAVETKYDGARVQVHYDGDSARLFSRN 275
Query: 274 FLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDT--SLNRFAE----FGSNQEIAKAAR 327
+ +E + + +EQ++ V ILDGE++ D + F E F ++A AAR
Sbjct: 276 LEEVTEPLPEVVEFVEQSLSV-PAILDGEVVAVDDDGTPRPFQEILRRFRRKHDVA-AAR 333
Query: 328 DGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHV 387
+ +S + +AFD L+V ++ L ERH+ RLE+L+ D V
Sbjct: 334 EDVSVE----LYAFDCLHVDGEDLLDTPLSERHD-----------RLESLLADG-----V 373
Query: 388 RPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIR 447
P A + DEV + ++ EGI+LK+ S + PG R WLK KP+
Sbjct: 374 SPLS------YADDADEVADIEADALDAGHEGIMLKNPDSTYTPGSRGKNWLKRKPDV-- 425
Query: 448 AGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA 507
LD+++ G +G GRR + F+V+ A D Y +V TG++DEEL+
Sbjct: 426 --ETLDLVVTGAEWGEGRRANLLGTFVVSAR---ADDGYE----PVGKVATGITDEELER 476
Query: 508 VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVF 567
+ +L+P+ R +++ DV I E +++ + + +S +
Sbjct: 477 LHERLQPHVR------------------TEDGTDVDI---EPAVVFEVGYE-EIQQSPTY 514
Query: 568 SAPYSLRFPRIDRVRYDKPWHDC 590
+ Y+LRFPR VR DK D
Sbjct: 515 GSGYALRFPRFVGVREDKSPSDA 537
>gi|1352290|sp|P37913.2|DNLI1_MOUSE RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|641912|gb|AAB60500.1| DNA ligase I [Mus musculus]
gi|905354|gb|AAA70403.1| DNA ligase I [Mus musculus]
Length = 916
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 151/604 (25%), Positives = 250/604 (41%), Gaps = 112/604 (18%)
Query: 43 VDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNA 102
V Y S RL P E G+ + VL + A G +S +R KG A
Sbjct: 328 VLYLSLNRLGPPQQGLE---LGVGDGVLLKAVAQATGRQLES---IRAEVAEKGDVGLVA 381
Query: 103 GNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMK 162
N +L ISG T + D+ RL S + A+K+ ++ L E +
Sbjct: 382 ENSRSTQRLMLPPPPLTISGVFT--KFCDIA-RLTGSASMAKKMDIIKGLFVACRHSEAR 438
Query: 163 WIIMIILKDLKLGISEKSIFH------EFHPDAEDLFNVTCD------------------ 198
+I + L+LG++E+S+ P ++ V D
Sbjct: 439 YIARSLSGRLRLGLAEQSVLAALAQAVSLTPPGQEFPTVVVDAGKGKTAEARKMWLEEQG 498
Query: 199 ----------------LKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
+ ++ E +R H + + G ++P LA ++
Sbjct: 499 MILKQTFCEVPDLDRIIPVLLEHGLERLPEHCK--LSPGVPLKPMLAHPTRGVSEVLKRF 556
Query: 243 HGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHS-EYGHAMSKIIE-QNVLVDRCIL 299
+ E K+DG R QIH G E+ FSR+ D++ +Y +S+I + ++ V IL
Sbjct: 557 EEVDFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKHPSVTSFIL 616
Query: 300 DGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKER 359
D E + WD + F + D Q+C +AFD++Y+ S++ Q L R
Sbjct: 617 DTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVRQPLSRR 676
Query: 360 HELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW--SLVAHNVDEVEKFFKETIENRD 417
+LL++ + V +GE + SL + +++ +F ++++++
Sbjct: 677 RQLLRE-------------------NFVETEGEFVFTTSLDTKDTEQIAEFLEQSVKDSC 717
Query: 418 EGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFL 474
EG+++K D+ + +E RS WLKLK +Y+ G LD+++IG Y G G+R G FL
Sbjct: 718 EGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFL 777
Query: 475 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK----PYFRKYEYPKRAPPSFY 530
+A A D + C++GTG SDEEL+ L+ P R Y
Sbjct: 778 LA-----AYDEESEELQAICKLGTGFSDEELEEHHQSLQALVLPTPRPY----------- 821
Query: 531 QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---------YSLRFPRIDRV 581
V + PD W++ SI+ + ++ S ++ A SLRFPR RV
Sbjct: 822 -VRIDGAVAPDHWLDP---SIVWEVKCADLSL-SPIYPAARGLVDKEKGISLRFPRFIRV 876
Query: 582 RYDK 585
R DK
Sbjct: 877 RKDK 880
>gi|348551158|ref|XP_003461397.1| PREDICTED: DNA ligase 1-like [Cavia porcellus]
Length = 919
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 129/510 (25%), Positives = 218/510 (42%), Gaps = 95/510 (18%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL + + +K+ ++ L E ++I + L+LG++E+S+
Sbjct: 412 IARLTGNASMTKKMDIIKGLFVACRHSEARFIARALSGRLRLGLAEQSVLAALSQAVSLT 471
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 472 PPGQEFPPAVVDAGKGKTTEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPE 531
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H R + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 532 HCR--LSPGVPLKPMLAHPTRGVSEVLKRFEETAFTCEYKYDGQRAQIHLLEGGEVKIFS 589
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 590 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 649
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L +R +LL++ + V
Sbjct: 650 AEIQVQVCLYAFDLIYLNGESLVREPLSQRRQLLRE-------------------NFVET 690
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 691 EGEFVFATSLDTKDMEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 750
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A A D + C++GTG SDE+
Sbjct: 751 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEQ 805
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ L+ P R Y V + PD W++ K LS++
Sbjct: 806 LEEHYQSLQALVLPTPRPY------------VRADGAVAPDHWLDPSAVWEVKCADLSLS 853
Query: 557 SDIRTIRSEVFSAP-YSLRFPRIDRVRYDK 585
R V S SLRFPR RVR DK
Sbjct: 854 PIYPAARGLVDSEKGISLRFPRFIRVREDK 883
>gi|403222948|dbj|BAM41079.1| DNA ligase 1 precursor [Theileria orientalis strain Shintoku]
Length = 733
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 215/502 (42%), Gaps = 94/502 (18%)
Query: 145 KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH--------------------- 183
K ++ L+ +E K+II + + L++GI +IF
Sbjct: 252 KKDIIKKLLITAKKEEAKYIIRFLQQKLRIGIGINTIFQCVADAFYLTKVGSEGSEPVGD 311
Query: 184 -------EFHPDAEDL-FNVTCDLKLVCE---------KLKDRNQRHKRQDIEVGKAVRP 226
E + E++ F V + LV K D Q + I G VRP
Sbjct: 312 VRTNKSVELNDTLEEMEFAVRTAITLVPNIDKVVGHLLKGDDSTQLLEHCKITPGIPVRP 371
Query: 227 QLAMRIGDAHAAWRKLHGKEVVIEC--KFDGDRIQIHK-NGSEIHYFSRSFLD----HSE 279
LA + + + G+ V+ C K+DG+R+Q+H I FSR+ + + +
Sbjct: 372 MLAKPVNTTDEIVQSVGGENVLFTCEYKYDGERVQLHLLRDRTIKLFSRNMENLCPKYPD 431
Query: 280 YGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYF 339
+K I ++ CI+D E++ D N+ F + D + ++C F
Sbjct: 432 VVANFAKCITDDL--KECIIDCEVVPMDNE-NKILSFQCLSTRKRKDVDVNNISVKVCLF 488
Query: 340 AFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVA 399
FD+LY+ S++ L +R +LL +KP G L S + +
Sbjct: 489 PFDILYLNGESLVTLPLSKRRDLLHSSMKPQTGLL----------SFAKYKN-------V 531
Query: 400 HNVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIRAGSD-LDVLI 456
++D+++ F K ++ EG+++K L K +EP RS KWLK K +YI SD +D++
Sbjct: 532 DSLDDIDDFLKMAVQESCEGLMIKTLDDKATYEPQARSNKWLKFKKDYISGMSDSVDLVP 591
Query: 457 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 516
+G +YG G+R FL+A+ + P + Y C+ GTG +D+ L + L+
Sbjct: 592 MGAFYGKGKRTNVYGSFLLAVYD-PIQEIYQ----GVCKTGTGFNDQTLKELHDSLQNNV 646
Query: 517 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEK---------SIILSITSDIRTIRSEVF 567
+ PS Y+V++ K PDVW SPEK SI T+ R +E
Sbjct: 647 V------NSKPSNYEVSD--KMVPDVWF-SPEKVWECKCADLSISPVYTAANRLTTNE-- 695
Query: 568 SAPYSLRFPRIDRVRYDKPWHD 589
LRFPR RVR DK D
Sbjct: 696 -KGIGLRFPRFLRVREDKKPED 716
>gi|332022772|gb|EGI63045.1| DNA ligase 1 [Acromyrmex echinatior]
Length = 914
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 185/417 (44%), Gaps = 55/417 (13%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-KNGSEIHYFSRSFLDHS- 278
G ++P LA + G + E K+DG+R QIH + +I +SR+ D++
Sbjct: 533 GIPLKPMLAHPTKGVQEVLTRFEGLKFTCEWKYDGERAQIHVADNGQIKIYSRNQEDNTT 592
Query: 279 EYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR--- 334
+Y + + + V CILD E + WD + F Q ++ R + +
Sbjct: 593 KYPDIIKRFKNSRGDEVKNCILDCEAVAWDNEKKQILPF---QILSTRKRKDANEEDIKV 649
Query: 335 QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPC 394
Q+C F FD+LY+ D ++ + +R ELL++ K +G
Sbjct: 650 QVCVFMFDLLYLNDEPLVKEPFVKRRELLKQHFKEVEGE--------------------- 688
Query: 395 W----SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA 448
W SL A ++EVE F E+++ EG+++K L + +E RS WLKLK +Y+
Sbjct: 689 WKFANSLDASTMEEVEVFLDESVKGNCEGLMVKTLEKEATYEIAKRSRNWLKLKKDYLDG 748
Query: 449 -GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA 507
G LDV++IGGY G G+R G FL+A D + S C++GTG +++L+
Sbjct: 749 VGDTLDVVVIGGYIGKGKRTGTYGGFLLACY-----DLENEEYQSICKIGTGFKEDDLEN 803
Query: 508 VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIR 563
+F+ + P+ S+Y+ +S PD W E + K LS++ R
Sbjct: 804 HTK----FFKDHIVPQVK--SYYRF--DSSHEPDHWFEPVQVWEIKCADLSLSPVHRAAI 855
Query: 564 SEVFSAP-YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
V SLRFPR R+R DK Q + ++ K ++D
Sbjct: 856 GIVDPEKGISLRFPRFIRIREDKTCEQATSAQDVANMYNNQEQIKNKTSVSKATEED 912
>gi|194742640|ref|XP_001953809.1| GF17047 [Drosophila ananassae]
gi|190626846|gb|EDV42370.1| GF17047 [Drosophila ananassae]
Length = 788
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 208/486 (42%), Gaps = 68/486 (13%)
Query: 144 EKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVC 203
E+ +L L +K +++ I ++ +DL++ + I F P+A + + DL +
Sbjct: 158 EQTELLQELCRKATDLDLRTFIRLVKQDLRINARARHILDAFGPEAYPAYQSSRDLASIV 217
Query: 204 EKLKDRNQRHKRQD------------IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIEC 251
++ + R K Q I+V + P LA A++K + E
Sbjct: 218 KQFASQGTRTKAQTVPKKVKKGNASGIQVMTPISPMLASACKSVEEAFKKSPAG-LYSEI 276
Query: 252 KFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDT 308
K+DG+R+QIHK G + +FSR+ +DH + I + ILD E+++ DT
Sbjct: 277 KYDGERVQIHKQGKDFKFFSRNLKPVMDH-KIKDLKDYIPRAFPGAEEMILDSEIILVDT 335
Query: 309 SLNRFAEFGS-----NQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELL 363
FGS Q A AA +C F FD + + ++R ++L
Sbjct: 336 DTGALLPFGSLGAHKKQTFANAA---------VCLFVFDCILYDGEDLTQMPFRDRRDIL 386
Query: 364 QKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLK 423
++ +KP + SHV + S E+ + + EG+VLK
Sbjct: 387 EQNIKP-------------IKSHV----QLSESEFLKTKSELAMMTAKVLHANLEGVVLK 429
Query: 424 DLGSKWEPGDRSGKWLKLKPEYI---RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAER 480
S ++PG R+ WLK+K +Y+ + D++++G +YGSG++GG ++ FL+
Sbjct: 430 SPSSTYQPGKRN--WLKVKKDYLFDGKMADTADLVVLGAWYGSGKKGGVLSIFLMGCY-- 485
Query: 481 PAPDTYPRRFISFCRVGTGLSD---EELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSK 537
D+ R + + +V +GL D EE+ + KL + P +
Sbjct: 486 ---DSKDRLWKTVTKVHSGLDDITNEEVHNSLIKLTERADANQTPS-------WLLCKKS 535
Query: 538 ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFV 597
PDV ++P + IT T ++ S+RFPRI R R DK + D+
Sbjct: 536 LVPDVLAKNPMDMPVWEITGAEFTKAEAHTASGISIRFPRITRRRSDKTAKEANDLAHLE 595
Query: 598 ELVHSS 603
+L +S
Sbjct: 596 DLFDAS 601
>gi|68533696|gb|AAH98869.1| Zgc:112973 [Danio rerio]
Length = 752
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 198/445 (44%), Gaps = 51/445 (11%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
LTI+E++ L RL+ ++ + L ++ KK ++K I ++ DLK+ K I
Sbjct: 285 LTIQEVDASLSRLSQLTKEDDQQAELQSIAKKCTGNDLKCYIRLVKHDLKINSGAKHILD 344
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQR--------HKRQDIEVG--KAVRPQLAMRIG 233
P+A D F + +L V +++ RNQ+ K IE V+P LA
Sbjct: 345 AVDPNAYDAFKASRNLGDVIDRVL-RNQQDASNGTGPRKILSIEASLMTPVQPMLAEACK 403
Query: 234 DAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQ 290
A +K + E K+DG+R+Q+HKNG+ YFSRS L H + H I +
Sbjct: 404 SIEYAMKKCPNG-MYSEIKYDGERVQVHKNGNHFSYFSRSLKPVLPH-KVAHFKDFIPQA 461
Query: 291 NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTS 350
ILD E+L+ DT ++ FG+ KAA D Q+ F FD +Y S
Sbjct: 462 FAGGHSMILDAEVLLIDTKTSKPLPFGTLGVHKKAA----FQDAQVGLFVFDCIYFNGVS 517
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L ER + L + VP+ L S ++ ++ +
Sbjct: 518 LMDKPLCERRKFLHDNM--------VEVPNRILFSEMKH---------VTRAPDLAEMIT 560
Query: 411 ETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRG 467
I EG+VLKD+ +EPG R WLK+K +Y+ G+ D++++G +YG G G
Sbjct: 561 RVIREGLEGLVLKDIKGLYEPGKRH--WLKVKKDYLNEGAMADTADLVVLGAFYGKGSNG 618
Query: 468 GEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPP 527
G ++ FL+ D R++ + + G D LD + L + + P + P
Sbjct: 619 GIMSSFLMGCY-----DPESRKWCTVTKCSGGFDDAMLDRLQKDLD-VIKIGKDPSKIPG 672
Query: 528 SFYQVTNNSKERPDVWIESPEKSII 552
V N PD I P+K+ +
Sbjct: 673 WLKIVKNY---YPDFIIRDPQKAPV 694
>gi|1706484|sp|P54875.1|DNLI_METTF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|1279773|gb|AAC44823.1| DNA ligase [Methanothermobacter thermautotrophicus]
Length = 557
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 133/481 (27%), Positives = 227/481 (47%), Gaps = 72/481 (14%)
Query: 121 SGGLTIKELNDLLDRLAS-SENRAE--KISVLSTLIKKTNAQEMKWIIMIILKDLKLGIS 177
S LT++ + L LAS S +RA+ KI++L ++ + E ++I +L++L++G++
Sbjct: 111 SQPLTVEFVYSRLKALASASGDRAQSKKINILVEVLSQAKPLEARYITRTVLEELRVGVA 170
Query: 178 E----KSIFHEFHPD---AEDLFNVTCDLKLVCEKLKDRNQRH-KRQDIEVGKAVRPQLA 229
E +I F D E +T DL +V ++ + R ++E G+ V+P LA
Sbjct: 171 EGIIRDAIARAFEVDPALVERAHMLTNDLGMVAAVAREEGEPGLGRLNLEPGRPVKPMLA 230
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE 289
+A +L E K+DG R+QIH+ G E+ F+R + + + + +E
Sbjct: 231 QLASSIESAITELG--RAFCETKYDGIRVQIHRCGDEVSIFTRRLENITAAVPEILEGVE 288
Query: 290 QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR-----DGLSSDRQLCYFAFDVL 344
+ + D I++GE++V T R A F Q I + R D L+ + L F FDVL
Sbjct: 289 EALPADDYIVEGEIIV--TMDGRPASF---QYILQRVRRKYDVDRLTREVPLSLFLFDVL 343
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLE-TLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
Y +I + L R E+L+ ++ GR+E + + D G + N+D
Sbjct: 344 Y-HRGPLIDEPLWHRREVLESILSEIPGRVEASRMVDVGPD----------------NLD 386
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGS 463
+ FKE+I EGI++KD + + PG R K LK K E LD++++GG YG
Sbjct: 387 DALWLFKESIREGHEGIMIKDTEAPYIPGIRGKKMLKFKAE----PETLDLIVVGGTYGR 442
Query: 464 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
G+R V +L+A+ + + + + V TGL D+ L + +++ K E
Sbjct: 443 GKRAHLVGSYLLAVRDEKSGE-----LKTIAHVATGLDDQTLQDLSERMENL--KVERRG 495
Query: 524 RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 583
R + +P++ +E I +RS + + YSLRFP + R+R
Sbjct: 496 R----------KIRVKPEIILEVAYSEI----------VRSPEYESGYSLRFPVVKRIRD 535
Query: 584 D 584
D
Sbjct: 536 D 536
>gi|109125447|ref|XP_001111346.1| PREDICTED: DNA ligase 1 isoform 1 [Macaca mulatta]
Length = 919
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 228/545 (41%), Gaps = 96/545 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++ +S+
Sbjct: 411 IARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAGQSVLAALSQAVSLT 470
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 471 PPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPE 530
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 531 HCK--LSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFS 588
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 589 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 648
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 649 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 689
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 690 EGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 749
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + D + C++GTG SDEE
Sbjct: 750 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEE 804
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ LK P R Y V + PD W++ K LS++
Sbjct: 805 LEEHHQSLKALVLPSPRPY------------VRIDGAVTPDHWLDPSAVWEVKCADLSLS 852
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G++ G
Sbjct: 853 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSG 912
Query: 615 GLQDD 619
+D
Sbjct: 913 SDPED 917
>gi|325960182|ref|YP_004291648.1| DNA ligase [Methanobacterium sp. AL-21]
gi|325331614|gb|ADZ10676.1| DNA ligase [Methanobacterium sp. AL-21]
Length = 560
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 136/514 (26%), Positives = 236/514 (45%), Gaps = 85/514 (16%)
Query: 101 NAGNFPMVAAEVLQRRQ--GMISGGLTIKELNDLLDRLAS-SENRAE--KISVLSTLIKK 155
+AG+ A E+ +++ + S LTIK++ L ++A+ S NRA+ K+ +L L+
Sbjct: 96 DAGDIGRAAQELFSKKKQATLFSRKLTIKKVRSNLMKMATVSGNRAQSKKLEILRELLSS 155
Query: 156 TNAQEMKWIIMIILKDLKLGISEKSI----FHEFHPD---AEDLFNVTCDLKLVCEKLKD 208
+ E K+I ++++L++G+ E +I F D E +T DL LV E K+
Sbjct: 156 ASPTEAKYITRTVIEELRVGVGEGTIRDALSQAFGVDKAIVERAHMLTNDLGLVAEVSKE 215
Query: 209 RN-QRHKRQDIEVGKAVRPQLA-----MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK 262
+ ++ + GK V+P LA + W E K+DG R+QIH+
Sbjct: 216 EGVEGLQKLSLNPGKPVKPMLAQLSPGIETSITEMGW-------AFCETKYDGIRVQIHR 268
Query: 263 NGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEI 322
G E++ F+R + S + + I++++ I++GE++V R + S Q I
Sbjct: 269 LGDEVNVFTRRLENISNAVPEIVEYIKKDLPHKNFIVEGEIIV-----TRDGKPISFQYI 323
Query: 323 AKAARDGLSSDRQ-----LCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETL 377
+ R +R L + FDVLY G+ ++ ++R E+L+ +V + ++E
Sbjct: 324 LQRVRRKYDIERMRNEVPLKLYLFDVLYYGE-PLLDAPFEKRREVLESIVNITPDKIE-- 380
Query: 378 VPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK 437
L+ V+ + + +V E + F +I+ EGI++KD + + PG R K
Sbjct: 381 -----LSEQVK--------VTSESVQEAQDLFNNSIKGGHEGIMIKDPTAPYIPGIRGKK 427
Query: 438 WLKLKPEYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVG 497
LK K E LD++++GG YG G+R + +L+A + F +
Sbjct: 428 MLKFKAE----PETLDLVVVGGTYGKGKRAHFIGSYLLAAQDE------DNEFKTLAHAA 477
Query: 498 TGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSIT- 556
TGL D+ L + +P SK V I +P+ IIL I
Sbjct: 478 TGLDDKTLQELSELSEPLI------------------TSKVGRQVQI-APQ--IILEIAY 516
Query: 557 SDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDC 590
S+I ++S + + YSLRFP + R+R D D
Sbjct: 517 SEI--VKSPEYESGYSLRFPVVKRIRNDLSLDDI 548
>gi|170289998|ref|YP_001736814.1| ATP-dependent DNA ligase I [Candidatus Korarchaeum cryptofilum
OPF8]
gi|224487898|sp|B1L3V2.1|DNLI2_KORCO RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 2
gi|170174078|gb|ACB07131.1| DNA ligase I, ATP-dependent Dnl1 [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 594
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 124/526 (23%), Positives = 237/526 (45%), Gaps = 61/526 (11%)
Query: 100 PNAGNFPMVAAEVLQRR--QGMISGGLTIKELNDLLDRLASSENRAE---KISVLSTLIK 154
P G+ +A + ++ Q + LT++ + D L ++A + K+ +++ ++
Sbjct: 85 PKLGDIGKLAEWAVSKKAAQSFFTEDLTVERVFDTLSKVARATGEGAQDLKVRLIAGILS 144
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF----------HEFHPDAEDLFNVTCDLKLVCE 204
E ++I I+ + L+LG+ + ++ + E +N+ D+ + +
Sbjct: 145 DAKPLEARYIARIVTEKLRLGVRDMTVLDALSEAFLKGRAYRDKLERKYNIYPDIGKIAK 204
Query: 205 KLKDRNQRHKRQ-DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-- 261
+ ++ + + I +G VRP LA R+ A K+ G + E K+DG+R+QIH
Sbjct: 205 VVAEKGIKGLDEITITLGIPVRPMLAQRLRSAEEIMEKI-GPRIFAEFKYDGERMQIHVW 263
Query: 262 KNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQE 321
K+G ++ FSR D +E + + + + V +LD E + + F QE
Sbjct: 264 KDG-KVKIFSRRLEDITEPYPDVREYVSKAVEGHEVVLDCETVAINPDTGEILPF---QE 319
Query: 322 IAKAARDGLSSDRQLCY----FAFDVLYVGDTSVIHQSLKERHELLQKVVKPS-KGRLET 376
+ R + Y +AFD+LY+ ++ + L +R ++L++++K + K RL
Sbjct: 320 LMHRRRKYGVEEAMKTYPTVTYAFDLLYLDGRELLDEQLDDRRKILKEILKENEKARLVQ 379
Query: 377 LVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSG 436
+ + NV+E+E+FF+ +E EG+V+KD S ++ G R
Sbjct: 380 ------------------YEEIDGNVEELERFFEHAVEMGTEGLVVKDPKSIYQAGVRGW 421
Query: 437 KWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCR 495
W+KLK YI + +D++++G ++G G+R G L+A A P D F + C+
Sbjct: 422 SWIKLKRSYISKMIEPVDLVVVGAFWGKGKRAGTYGALLMA-AYSPEEDV----FKTVCK 476
Query: 496 VGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI 555
+G+G +DEEL ++ Y+ + P + + P + I LS
Sbjct: 477 MGSGFTDEEL----ARMPKLLEDYKIDHKHPSVISNIEADVYFVPVKVAQVLGDEITLSP 532
Query: 556 TSDI--RTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
T +R +A ++RFPR R DK D + +E+
Sbjct: 533 THTCGWNKVRK---NAGLAIRFPRFMGWRDDKGPQDATTEEEIIEM 575
>gi|340054328|emb|CCC48624.1| putative DNA ligase I [Trypanosoma vivax Y486]
Length = 696
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 194/432 (44%), Gaps = 64/432 (14%)
Query: 196 TCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDG 255
T + K+ EKL I G V+PQLA + GK E K+DG
Sbjct: 308 TAEAKMHAEKLS----------IRPGIPVKPQLAHPTSGVGTILDRFQGKAFTSEYKYDG 357
Query: 256 DRIQIHKNGSE-IHYFSRSFLDHSEYGHAMSKIIEQNVL---VDRCILDGEMLVWDTSLN 311
+R QIH + + FSR+ H+ + ++ Q L V+ I+D E++ D
Sbjct: 358 ERAQIHYHKDQGFQIFSRNSETHTGKYPDIISVLPQTFLPDSVESFIIDSEVVAVDVETG 417
Query: 312 RFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKP 369
F Q + ++ LS + + C F FD+LY + + L R E+L+ P
Sbjct: 418 ALQAFQVLQH--RGRKNVLSENVTIPVCVFVFDLLYFNGQPQMAKPLAARREVLRAHFTP 475
Query: 370 SKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK- 428
+ + +H L + +VD+++ F + +I + EG+++K L +
Sbjct: 476 VHTKFQ--FAEH---------------LDSGDVDDIQAFLERSIRDGAEGLMIKTLEEEA 518
Query: 429 -WEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTY 486
+ P RS WLKLK +Y+ +D LD++ IG YYG G+R G FL+A DT
Sbjct: 519 FYTPAKRSHYWLKLKKDYMDGVADTLDLVPIGAYYGKGKRTGVFGGFLLACY-----DTE 573
Query: 487 PRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES 546
+ S C++GTG D++L+++ L+ + + P +Y+ ++++ DVW+++
Sbjct: 574 NDEYQSICKIGTGFQDDQLESITRVLQSCILEEQ------PRYYR----TEDKADVWLQA 623
Query: 547 PEKSIILSITSDIRTIRSEVFSA--------PYSLRFPRIDRVRYDKPWHDCLDVQSFVE 598
S + + + +I F+A +LRFPR RVR DK H+ E
Sbjct: 624 ---SQVWEVRAADLSISPAHFAAYGLVDPSKGIALRFPRFVRVREDKQAHEATSALQVAE 680
Query: 599 LVHSSNGTTQKG 610
+ + + + G
Sbjct: 681 MYNVQSLAQKSG 692
>gi|289191596|ref|YP_003457537.1| DNA ligase I, ATP-dependent Dnl1 [Methanocaldococcus sp. FS406-22]
gi|288938046|gb|ADC68801.1| DNA ligase I, ATP-dependent Dnl1 [Methanocaldococcus sp. FS406-22]
Length = 573
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 145/628 (23%), Positives = 286/628 (45%), Gaps = 96/628 (15%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVD-------YFSALRLILPSLDRERGSYG 64
+ +FN I+KT +KR F K +D + + A+ + P D ER G
Sbjct: 6 VCEIFNKIEKTTKRLEKRDYFIKLIDMVKEKGKPEDLKKICYMAIGRVYPEYD-ER-ELG 63
Query: 65 LKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQ---RRQGMIS 121
+ E +L N + ++G++KD K + G +A E L+ ++ +
Sbjct: 64 IGEKLLINA-VTSIGINKDEL-------LEKIKETGDIG----LAIEQLKSKIKQASLFF 111
Query: 122 GGLTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE 178
LT+ E+ + L R+ E ++ +K+ ++S+L + + E +++ +IL+D+++G++
Sbjct: 112 QPLTVDEVYETLKRVGEIEGEGSQKKKLRLISSLFLRASPIECRYLARLILEDMRIGMNV 171
Query: 179 KSI-------FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMR 231
+I F+ E ++ +T D+ L+ EKL + + +++ + ++P LA
Sbjct: 172 PTILDSLSVYFNVPKEKLEKIYAITNDIGLLAEKLLMGDLESEDLKLKLFRPIKPMLAQL 231
Query: 232 IGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE-- 289
A L E K+DG R+QIHK+G+++ +SR D + +A+ +I+E
Sbjct: 232 TPSIEEAL--LEMGRAQFETKYDGARVQIHKDGNKVKIYSRRLEDVT---NALPEIVEAV 286
Query: 290 QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR-----DGLSSDRQLCYFAFDVL 344
+N+ VD+ I++GE + D + F Q+I + R + + L + FD+L
Sbjct: 287 KNINVDKLIVEGECVAIDKQTGKPRPF---QDILRRFRRKYDIGKMMKEINLRVYLFDIL 343
Query: 345 YVGDTSVIHQSLKERHELLQKVV------KPSKGRLET-LVPDHGLNSHVRPQGEPCWSL 397
Y S I + ++R ++L+++V + + R+E L D ++ + L
Sbjct: 344 YKDGVSFIDEEFEKRRKVLEEIVGYENDWRTERERIEKELKSDKIIDI--------SYKL 395
Query: 398 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLII 457
V ++ +E ++F+ ++ EG+++K+L + + PG R K KP LDV+I
Sbjct: 396 VTNDANEAKEFYNWSLSIGHEGVMIKNLKAPYTPGSRVRTMYKFKPTL----ESLDVVIT 451
Query: 458 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 517
G G+R F + + + + YP VGTGL++ +L+ + ++
Sbjct: 452 KAKRGMGKRKDWYGSFEICVRDEEG-NLYP-----IGHVGTGLTEADLEMLKEEIDKI-- 503
Query: 518 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 577
V + E +V E I++ + + +S+ + Y+LRFPR
Sbjct: 504 --------------VIRDLGEEVEV-----EPKIVIEVAYE-EIQKSDKYPCGYALRFPR 543
Query: 578 IDRVRYDKPWHDCLDVQSFVELVHSSNG 605
+ R R+DK +D V+ + G
Sbjct: 544 VVRFRFDKGVNDINTVEDVERIYEIQRG 571
>gi|443700074|gb|ELT99220.1| hypothetical protein CAPTEDRAFT_157358 [Capitella teleta]
Length = 603
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 188/405 (46%), Gaps = 64/405 (15%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDH- 277
G ++P LA H + + E K+DG+R QIH +GS I+ +SR+ D+
Sbjct: 218 GVPLKPMLAHPTKGVHEVFNRFDKAAFTCEFKYDGERAQIHICDDGS-INVYSRNSEDNT 276
Query: 278 SEYGHAMSK---IIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR 334
S+Y +S+ + ++ V+ ++D E + WD ++ F + +
Sbjct: 277 SKYPDIISRMPTVTKEGVV--SAVIDSEAVAWDKENSQILPFQILSTRKRKDANEKDIKV 334
Query: 335 QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPC 394
Q+C +AFD+LY+ S++ + L++R ELL H + + Q
Sbjct: 335 QVCVYAFDLLYLNGKSLVKEPLRKRRELL-----------------HDSFNEIEGQFLFA 377
Query: 395 WSLVAHNVDEVEKFFKETIENRD-EGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GS 450
S+++ + D++ F ++I+ R+ EG+++K L + +E RS WLKLK +Y+ G
Sbjct: 378 KSMMSTDTDDIAVFLDDSIKGRNCEGLMVKTLDEDATYEIAKRSHNWLKLKKDYLDGVGD 437
Query: 451 DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL----- 505
LD+++IGGY+GSG+R G FL+A D F S C++GTG DE+L
Sbjct: 438 TLDLVVIGGYHGSGKRTGRYGGFLLACY-----DEENEEFQSICKIGTGFKDEDLEQHAK 492
Query: 506 ---DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSD 558
D V+ +PY+R +NS E PD W ++ + K+ LS++
Sbjct: 493 FFKDHVLDTPRPYYR---------------YDNSHE-PDHWFDAVQVWEVKAADLSVSPV 536
Query: 559 IRTIRSEVFSAP-YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
V SLRFPR R+R DK + E+ S
Sbjct: 537 HHAAAGLVDPEKGISLRFPRFLRIRDDKKSEEATSAAQVAEMYRS 581
>gi|148706114|gb|EDL38061.1| ligase I, DNA, ATP-dependent, isoform CRA_b [Mus musculus]
Length = 938
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 151/604 (25%), Positives = 250/604 (41%), Gaps = 112/604 (18%)
Query: 43 VDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNA 102
V Y S RL P E G+ + VL + A G +S +R KG A
Sbjct: 350 VLYLSLNRLGPPQQGLE---LGVGDGVLLKAVAQATGRQLES---IRAEVAEKGDVGLVA 403
Query: 103 GNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMK 162
N +L ISG T + D+ RL S + A+K+ ++ L E +
Sbjct: 404 ENSRSTQRLMLPPPPLTISGVFT--KFCDIA-RLTGSASMAKKMDIIKGLFVACRHSEAR 460
Query: 163 WIIMIILKDLKLGISEKSIFH------EFHPDAEDLFNVTCD------------------ 198
+I + L+LG++E+S+ P ++ V D
Sbjct: 461 YIARSLSGRLRLGLAEQSVLAALAQAVSLTPPGQEFPTVVVDAGKGKTAEARKMWLEEQG 520
Query: 199 ----------------LKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
+ ++ E +R H + + G ++P LA ++
Sbjct: 521 MILKQTFCEVPDLDRIIPVLLEHGLERLPEHCK--LSPGVPLKPMLAHPTRGVSEVLKRF 578
Query: 243 HGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHS-EYGHAMSKIIE-QNVLVDRCIL 299
+ E K+DG R QIH G E+ FSR+ D++ +Y +S+I + ++ V IL
Sbjct: 579 EEVDFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKHPSVTSFIL 638
Query: 300 DGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKER 359
D E + WD + F + D Q+C +AFD++Y+ S++ Q L R
Sbjct: 639 DTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVRQPLSRR 698
Query: 360 HELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW--SLVAHNVDEVEKFFKETIENRD 417
+LL++ + V +GE + SL + +++ +F ++++++
Sbjct: 699 RQLLRE-------------------NFVETEGEFVFTTSLDTKDTEQIAEFLEQSVKDSC 739
Query: 418 EGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFL 474
EG+++K D+ + +E RS WLKLK +Y+ G LD+++IG Y G G+R G FL
Sbjct: 740 EGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFL 799
Query: 475 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK----PYFRKYEYPKRAPPSFY 530
+A A D + C++GTG SDEEL+ L+ P R Y
Sbjct: 800 LA-----AYDEESEELQAICKLGTGFSDEELEEHHQSLQALVLPTPRPY----------- 843
Query: 531 QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---------YSLRFPRIDRV 581
V + PD W++ SI+ + ++ S ++ A SLRFPR RV
Sbjct: 844 -VRIDGAVAPDHWLDP---SIVWEVKCADLSL-SPIYPAARGLVDKEKGISLRFPRFIRV 898
Query: 582 RYDK 585
R DK
Sbjct: 899 RKDK 902
>gi|148706113|gb|EDL38060.1| ligase I, DNA, ATP-dependent, isoform CRA_a [Mus musculus]
Length = 934
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 151/604 (25%), Positives = 250/604 (41%), Gaps = 112/604 (18%)
Query: 43 VDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNA 102
V Y S RL P E G+ + VL + A G +S +R KG A
Sbjct: 346 VLYLSLNRLGPPQQGLE---LGVGDGVLLKAVAQATGRQLES---IRAEVAEKGDVGLVA 399
Query: 103 GNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMK 162
N +L ISG T + D+ RL S + A+K+ ++ L E +
Sbjct: 400 ENSRSTQRLMLPPPPLTISGVFT--KFCDIA-RLTGSASMAKKMDIIKGLFVACRHSEAR 456
Query: 163 WIIMIILKDLKLGISEKSIFH------EFHPDAEDLFNVTCD------------------ 198
+I + L+LG++E+S+ P ++ V D
Sbjct: 457 YIARSLSGRLRLGLAEQSVLAALAQAVSLTPPGQEFPTVVVDAGKGKTAEARKMWLEEQG 516
Query: 199 ----------------LKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
+ ++ E +R H + + G ++P LA ++
Sbjct: 517 MILKQTFCEVPDLDRIIPVLLEHGLERLPEHCK--LSPGVPLKPMLAHPTRGVSEVLKRF 574
Query: 243 HGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHS-EYGHAMSKIIE-QNVLVDRCIL 299
+ E K+DG R QIH G E+ FSR+ D++ +Y +S+I + ++ V IL
Sbjct: 575 EEVDFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKHPSVTSFIL 634
Query: 300 DGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKER 359
D E + WD + F + D Q+C +AFD++Y+ S++ Q L R
Sbjct: 635 DTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVRQPLSRR 694
Query: 360 HELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW--SLVAHNVDEVEKFFKETIENRD 417
+LL++ + V +GE + SL + +++ +F ++++++
Sbjct: 695 RQLLRE-------------------NFVETEGEFVFTTSLDTKDTEQIAEFLEQSVKDSC 735
Query: 418 EGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFL 474
EG+++K D+ + +E RS WLKLK +Y+ G LD+++IG Y G G+R G FL
Sbjct: 736 EGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFL 795
Query: 475 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK----PYFRKYEYPKRAPPSFY 530
+A A D + C++GTG SDEEL+ L+ P R Y
Sbjct: 796 LA-----AYDEESEELQAICKLGTGFSDEELEEHHQSLQALVLPTPRPY----------- 839
Query: 531 QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---------YSLRFPRIDRV 581
V + PD W++ SI+ + ++ S ++ A SLRFPR RV
Sbjct: 840 -VRIDGAVAPDHWLDP---SIVWEVKCADLSL-SPIYPAARGLVDKEKGISLRFPRFIRV 894
Query: 582 RYDK 585
R DK
Sbjct: 895 RKDK 898
>gi|148706115|gb|EDL38062.1| ligase I, DNA, ATP-dependent, isoform CRA_c [Mus musculus]
Length = 932
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 151/604 (25%), Positives = 250/604 (41%), Gaps = 112/604 (18%)
Query: 43 VDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNA 102
V Y S RL P E G+ + VL + A G +S +R KG A
Sbjct: 344 VLYLSLNRLGPPQQGLE---LGVGDGVLLKAVAQATGRQLES---IRAEVAEKGDVGLVA 397
Query: 103 GNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMK 162
N +L ISG T + D+ RL S + A+K+ ++ L E +
Sbjct: 398 ENSRSTQRLMLPPPPLTISGVFT--KFCDIA-RLTGSASMAKKMDIIKGLFVACRHSEAR 454
Query: 163 WIIMIILKDLKLGISEKSIFH------EFHPDAEDLFNVTCD------------------ 198
+I + L+LG++E+S+ P ++ V D
Sbjct: 455 YIARSLSGRLRLGLAEQSVLAALAQAVSLTPPGQEFPTVVVDAGKGKTAEARKMWLEEQG 514
Query: 199 ----------------LKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
+ ++ E +R H + + G ++P LA ++
Sbjct: 515 MILKQTFCEVPDLDRIIPVLLEHGLERLPEHCK--LSPGVPLKPMLAHPTRGVSEVLKRF 572
Query: 243 HGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHS-EYGHAMSKIIE-QNVLVDRCIL 299
+ E K+DG R QIH G E+ FSR+ D++ +Y +S+I + ++ V IL
Sbjct: 573 EEVDFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKHPSVTSFIL 632
Query: 300 DGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKER 359
D E + WD + F + D Q+C +AFD++Y+ S++ Q L R
Sbjct: 633 DTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVRQPLSRR 692
Query: 360 HELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW--SLVAHNVDEVEKFFKETIENRD 417
+LL++ + V +GE + SL + +++ +F ++++++
Sbjct: 693 RQLLRE-------------------NFVETEGEFVFTTSLDTKDTEQIAEFLEQSVKDSC 733
Query: 418 EGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFL 474
EG+++K D+ + +E RS WLKLK +Y+ G LD+++IG Y G G+R G FL
Sbjct: 734 EGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFL 793
Query: 475 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK----PYFRKYEYPKRAPPSFY 530
+A A D + C++GTG SDEEL+ L+ P R Y
Sbjct: 794 LA-----AYDEESEELQAICKLGTGFSDEELEEHHQSLQALVLPTPRPY----------- 837
Query: 531 QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---------YSLRFPRIDRV 581
V + PD W++ SI+ + ++ S ++ A SLRFPR RV
Sbjct: 838 -VRIDGAVAPDHWLDP---SIVWEVKCADLSL-SPIYPAARGLVDKEKGISLRFPRFIRV 892
Query: 582 RYDK 585
R DK
Sbjct: 893 RKDK 896
>gi|328719935|ref|XP_001943404.2| PREDICTED: DNA ligase 1-like [Acyrthosiphon pisum]
Length = 843
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 185/408 (45%), Gaps = 46/408 (11%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHS 278
G ++P LA H + G + E K+DG+R QIH ++G+ Y + S
Sbjct: 463 GIPLKPMLAHPTKGVHEVLSRFDGLKFTCEWKYDGERAQIHLTEDGNICIYSRNQENNTS 522
Query: 279 EYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLC 337
+Y ++++ + V ++D E + WD + F + + Q+C
Sbjct: 523 KYPDIINRLDSVKGPNVKSFVMDSEAVAWDRENKKIMPFQILSTRKRKNANEADIKVQVC 582
Query: 338 YFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSL 397
+ FD+LY+ S++ + ER +LL+ E + V Q SL
Sbjct: 583 VYMFDLLYLNGESLVKRPFCERRQLLR----------ENFI-------EVEEQFLLATSL 625
Query: 398 VAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDLDV 454
++EV+ F +E+I+ EG+++K L + +E RS WLKLK +Y+ G +DV
Sbjct: 626 DTTKMEEVQDFLEESIKGNCEGLMVKTLEEEATYEIAKRSRNWLKLKKDYLDGVGDTIDV 685
Query: 455 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 514
+++GGY G G+R G FL+A + PD+ + S C++GTG SDE+L
Sbjct: 686 VVLGGYLGRGKRTGTYGGFLLACYD---PDS--EEYQSICKIGTGFSDEDLQTHTE---- 736
Query: 515 YFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSAP 570
+F+++ P S+Y+ + PD W E+ + K LS++ R V
Sbjct: 737 FFQQHII--DGPKSYYRF--DQSHEPDHWFETVQVWEIKCADLSLSPVHRAALGIVDPEK 792
Query: 571 -YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS-----SNGTTQKGKE 612
SLRFPR R+R DK Q EL +S + G+T +E
Sbjct: 793 GISLRFPRFLRIREDKSIEQSTSAQQIAELYYSQVQIINQGSTNTNRE 840
>gi|297277484|ref|XP_002801366.1| PREDICTED: DNA ligase 1 isoform 2 [Macaca mulatta]
Length = 975
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 228/545 (41%), Gaps = 96/545 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++ +S+
Sbjct: 467 IARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAGQSVLAALSQAVSLT 526
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 527 PPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPE 586
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 587 HCK--LSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFS 644
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 645 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 704
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 705 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 745
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 746 EGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 805
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + D + C++GTG SDEE
Sbjct: 806 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEE 860
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
L+ LK P R Y V + PD W++ K LS++
Sbjct: 861 LEEHHQSLKALVLPSPRPY------------VRIDGAVTPDHWLDPSAVWEVKCADLSLS 908
Query: 557 SDIRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
R V S SLRFPR RVR DK P Q S Q+G++ G
Sbjct: 909 PIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSG 968
Query: 615 GLQDD 619
+D
Sbjct: 969 SDPED 973
>gi|410982858|ref|XP_003997763.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1 [Felis catus]
Length = 903
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 215/508 (42%), Gaps = 94/508 (18%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
L RL S+ A+K+ V+ L E ++I + L+LG++E+S+
Sbjct: 398 LPRLXST---AKKMDVIKGLFVACRHSEARFIARALSGRLRLGLAEQSVLAALAQAVSLT 454
Query: 183 ---HEFHPDAED-----------------------LFNVTCDLKLVCEKLKDRNQRHKRQ 216
+F P D F DL + L + H +
Sbjct: 455 PPGQDFPPAVVDAGKGRTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLEHLPE 514
Query: 217 D--IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRS 273
+ G ++P LA ++ E K+DG R QIH G E+ FSR+
Sbjct: 515 HCRLSPGVPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHVLEGGEVKIFSRN 574
Query: 274 FLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS 331
D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 575 QEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDAAD 634
Query: 332 SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
Q+C +AFD++Y+ S++ + L R +LL++ + V+ +G
Sbjct: 635 IQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVQTEG 675
Query: 392 EPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIR 447
E + SL + D++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+
Sbjct: 676 EFVFATSLDTKDTDQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLD 735
Query: 448 A-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 506
G LD+++IG Y G G+R G FL+A A D + C++GTG SDEEL+
Sbjct: 736 GVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEELE 790
Query: 507 AVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSD 558
L+ P R Y V + PD W++ K LS++
Sbjct: 791 DHFQSLQALVLPTPRSY------------VRADGAVAPDHWLDPSAVWEVKCADLSLSPI 838
Query: 559 IRTIRSEVFSAP-YSLRFPRIDRVRYDK 585
R V S SLRFPR RVR DK
Sbjct: 839 YPAARGLVDSEKGISLRFPRFIRVREDK 866
>gi|85083459|ref|XP_957121.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Neurospora
crassa OR74A]
gi|28918207|gb|EAA27885.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Neurospora
crassa OR74A]
Length = 923
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 146/567 (25%), Positives = 241/567 (42%), Gaps = 105/567 (18%)
Query: 119 MISGGLTIKELNDLLDRLASSE-NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGIS 177
M G K+++ + L++++ N K+ + K E K+I+ + L+LG++
Sbjct: 392 MTGTGAQQKKVDGIKKLLSAADANSTGKVDITKD---KGGPSEAKFIVRFLEGKLRLGLA 448
Query: 178 EKSIF---------HEFH-----PDAEDLFNVTCDLKLVCEKLKDRN------------Q 211
EKS+ HEF P D LK V +L +
Sbjct: 449 EKSVIVSLAQAMIAHEFAQKGKIPSESDFSKAESILKTVYSELPSYDVIIPAMLQHGIMN 508
Query: 212 RHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEI---- 267
+ + G ++P LA + G+ E K+DG+R QIH ++
Sbjct: 509 LREHCKLRPGVPLKPMLANPTKAITEVLDRFEGQTFTCEYKYDGERAQIHYVAKDVPKSE 568
Query: 268 ----------------HYFSRSFLDHSE-YGHAMSKI---IEQNVLVDRCILDGEMLVWD 307
FSR+ D S+ Y ++K+ +++ +LD E + WD
Sbjct: 569 GDLSQVASKDTGKGVAAIFSRNSEDLSQKYPDVLAKLPTWVKEGT--KSFVLDCESVAWD 626
Query: 308 TSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQK 365
T + F Q + + +D D ++ C FAFD+LY+ +V+ +SL+ER ELL++
Sbjct: 627 TVDKKVLPF--QQLMTRKKKDVKLEDVKVKVCVFAFDLLYLNGQAVVEKSLRERRELLRE 684
Query: 366 VVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL 425
KP +G S+ +DE++ F E+++ EG+++K L
Sbjct: 685 AFKPVEGEFAF-----------------ATSMDGQELDEIQSFLDESVKAGCEGLMVKML 727
Query: 426 G---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERP 481
S +EP RS WLK+K +Y+ G LD++++G Y+G G+R FL+A P
Sbjct: 728 DGAESGYEPSKRSRNWLKIKKDYLAGIGDSLDLVVLGAYHGKGKRTSVFGAFLLACY-NP 786
Query: 482 APDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPD 541
+ DTY + C +GTG SDE L + + L P + PK FY ++ + +PD
Sbjct: 787 STDTYE----TVCNIGTGFSDEVLQELHSSLSPII--IDRPK----PFYAHSSGGQHQPD 836
Query: 542 VWIESPE-----KSIILSITSDIRTIRSEVFSAP----YSLRFPRIDRVRYDKPWHDCLD 592
VW E P+ K+ L+++ + E SLRFPR +VR DK +
Sbjct: 837 VWFE-PKYVWEVKTADLTLSPRYKAGMKEGVDPSGEKGISLRFPRFIKVRDDKKPDEATT 895
Query: 593 VQSFVELVHSSNGTTQKGKEYGGLQDD 619
+ E+ GK G DD
Sbjct: 896 SRMVAEMYRKQESV---GKNKGPAVDD 919
>gi|384245430|gb|EIE18924.1| ATP-dependent DNA ligase [Coccomyxa subellipsoidea C-169]
Length = 651
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 181/412 (43%), Gaps = 55/412 (13%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-KNGSEIHYFSRSFLDHSE 279
G V+P LA K +E E K+DG+R Q+H ++ +SR+ +++
Sbjct: 271 GVPVKPMLAKATTGIAEVLEKFTDQEFTCEYKYDGERAQVHYTEDGKVFIYSRNSENNTG 330
Query: 280 YGHAMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLC 337
++ I+ V V +LD E + ++ + + F + + Q+C
Sbjct: 331 KYPDIAAIVPSMVREGVKSMVLDCEAVAFERATGKILPFQVLSTRKRKDVEVADIKVQVC 390
Query: 338 YFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSL 397
FAFD LY+ ++ + L ER L + V+ G L+ + +H S
Sbjct: 391 LFAFDCLYLNGAMLLQKPLTERRTALSQAVREKPGELQFAL----FKAH---------SY 437
Query: 398 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLI 456
+ +V+E+ F E++ EG+++K + S +EP RS WLKLK +Y+ G LDV +
Sbjct: 438 TSTDVEELGTFLNESVAAGTEGLIVKTMDSTYEPSRRSLHWLKLKKDYLEGVGDTLDVAV 497
Query: 457 IGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF 516
IG ++G G+R G FL+A+ P+ F + ++GTG S+E+L +L
Sbjct: 498 IGAWFGKGKRSGVFGAFLLAVYN---PEG--EEFQTISKIGTGFSEEQLKQFSEEL---- 548
Query: 517 RKYEYPKRAPPSFYQVTNNSKERPDVWIE--------------SPEKSIILSITSDIRTI 562
R + P P +Y+ + PD+W + SP L + + I
Sbjct: 549 RLHTIPTAKP--YYRYSETL--LPDIWFDAKTVWEVKCADFSISPRHKAALGLADPDKGI 604
Query: 563 RSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTT--QKGKE 612
S+RFPR+ +VR DK D + E+ T+ QKGK+
Sbjct: 605 ---------SIRFPRLVKVRDDKTPEDATSAEQVAEMYFKQALTSGQQKGKQ 647
>gi|328780199|ref|XP_392286.4| PREDICTED: DNA ligase 1-like [Apis mellifera]
Length = 677
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 183/402 (45%), Gaps = 53/402 (13%)
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-KNGSEIHYFSRSFLD 276
I G ++P LA + G + E K+DG+R QIH +I +SR+ +
Sbjct: 294 ITPGIPMKPMLAHPTKGVQEVLTRFDGLKFTCEWKYDGERAQIHLAEDGKISIYSRNQEN 353
Query: 277 H-SEYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR-DGLSSD 333
+ S+Y + + Q V CILD E + WD + F Q ++ R D SD
Sbjct: 354 NTSKYPDIIGRFKNTQGENVKSCILDCEAVAWDNDKKQILPF---QILSTRKRKDANESD 410
Query: 334 --RQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
Q+C F FD+LY+ ++ Q +R ELL++ K G +
Sbjct: 411 IKVQVCVFMFDLLYLNGEPLVQQPFIKRRELLKENFKEVIGEWKFAT------------- 457
Query: 392 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAG 449
SL +++V+ F E+++ EG+++K L + +E RS WLKLK +Y+
Sbjct: 458 ----SLDTSTMEQVQDFLDESVKGNCEGLMVKTLEEEATYEIAKRSRNWLKLKKDYLDGI 513
Query: 450 SD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAV 508
SD LDV++IGGY G G+R G FL+A D + S C++GTG S+E+L
Sbjct: 514 SDTLDVVVIGGYIGKGKRTGTYGGFLLACY-----DQENEEYQSICKIGTGFSEEDLQ-- 566
Query: 509 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT----SDIR 560
K +F+ EY S+Y+ +S PD W E + K LS++ + I
Sbjct: 567 --KHTEFFK--EYIISQTKSYYRY--DSSLEPDHWFEPIQVWEIKCADLSLSPVHKAAIG 620
Query: 561 TIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
+ E SLRFPR R+R DK D Q + ++
Sbjct: 621 IVDPE---KGISLRFPRFVRIRDDKNSDDATSAQQVASMYNN 659
>gi|336469372|gb|EGO57534.1| hypothetical protein NEUTE1DRAFT_41251 [Neurospora tetrasperma FGSC
2508]
gi|350290993|gb|EGZ72207.1| ATP-dependent DNA ligase [Neurospora tetrasperma FGSC 2509]
Length = 770
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 146/567 (25%), Positives = 243/567 (42%), Gaps = 105/567 (18%)
Query: 119 MISGGLTIKELNDLLDRLASSE-NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGIS 177
M G K+++ + L++++ N K+ + +K E K+I+ + L+LG++
Sbjct: 239 MTGTGAQQKKVDGIKKLLSAADANSTGKVDITK---EKGGPSEAKFIVRFLEGKLRLGLA 295
Query: 178 EKSIF---------HEFH-----PDAEDLFNVTCDLKLVCEKLKDRN------------Q 211
EKS+ HEF P D LK V +L +
Sbjct: 296 EKSVIVSLAQAMIAHEFAQKGKIPSESDFSKAESILKTVYSELPSYDVIIPAMLQHGIMN 355
Query: 212 RHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-------KNG 264
+ + G ++P LA + G+ E K+DG+R QIH K+
Sbjct: 356 LREHCKLRPGVPLKPMLANPTKAITEVLDRFEGQTFTCEYKYDGERAQIHYVAKDAPKSE 415
Query: 265 SEIH-------------YFSRSFLDHSE-YGHAMSKI---IEQNVLVDRCILDGEMLVWD 307
++ FSR+ D S+ Y ++K+ +++ +LD E + WD
Sbjct: 416 GDLSQVASKDTGKGVAAIFSRNSEDLSQKYPDVLAKLPTWVKEGT--KSFVLDCESVAWD 473
Query: 308 TSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQK 365
T ++ F Q + + +D D ++ C FAFD+LY+ +V+ +SL+ER ELL++
Sbjct: 474 TVDHKLLPF--QQLMTRKKKDVKLEDVKVKVCVFAFDLLYLNGQAVVEKSLRERRELLRE 531
Query: 366 VVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL 425
KP +G S+ +DE++ F E+++ EG+++K L
Sbjct: 532 AFKPVEGEFAFAT-----------------SMDGQELDEIQTFLDESVKAGCEGLMVKML 574
Query: 426 G---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERP 481
S +EP RS WLK+K +Y+ G LD++++G Y+G G+R FL+A P
Sbjct: 575 DGAESGYEPSKRSRNWLKIKKDYLAGIGDSLDLVVLGAYHGKGKRTSVFGAFLLA-CYNP 633
Query: 482 APDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPD 541
+ DTY + C +GTG SDE L + + L P P FY ++ + +PD
Sbjct: 634 STDTYE----TVCNIGTGFSDEVLQELHSSLSPIIIDR------PKPFYAHSSGGQHQPD 683
Query: 542 VWIESPE-----KSIILSITSDIRTIRSEVFSAP----YSLRFPRIDRVRYDKPWHDCLD 592
VW E P+ K+ L+++ + E SLRFPR +VR DK +
Sbjct: 684 VWFE-PKYVWEVKTADLTLSPRYKAGMKEGVDPSGEKGISLRFPRFIKVRDDKKPDEATT 742
Query: 593 VQSFVELVHSSNGTTQKGKEYGGLQDD 619
+ E+ GK G DD
Sbjct: 743 SRMVAEMYRKQESV---GKNKGPAVDD 766
>gi|156083667|ref|XP_001609317.1| DNA ligase I [Babesia bovis T2Bo]
gi|154796568|gb|EDO05749.1| DNA ligase I [Babesia bovis]
Length = 773
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 191/409 (46%), Gaps = 53/409 (12%)
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIEC--KFDGDRIQIHK-NGSEIHYFSRSF 274
I G VRP LA I + + ++ C K+DG+R+QIH + FSR+
Sbjct: 399 IRPGIPVRPMLAKAISKTSDIVQAIGAEDNPFTCEYKYDGERLQIHLLEDRCVKLFSRNM 458
Query: 275 LD-HSEYGHAMSKIIEQ-NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSS 332
+ +Y M + V CI+D E++ +D S + F Q+++ R G++
Sbjct: 459 ENLCGKYPDVMENFLTSVKPDVQDCIIDSEVVAYDRSSGKILPF---QQLSTRKRKGVTV 515
Query: 333 DR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
+ Q+C + FD+LY+ ++ +SLKER + L+ V G L H
Sbjct: 516 NDVTIQVCIYPFDILYLNGEQIVDKSLKERRKALESTVYEKDGLL-----------HFAR 564
Query: 390 QGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK--WEPGDRSGKWLKLKPEYIR 447
+ ++++++ F ++ + + EG+++K L S+ +EP RS WLK K +YI
Sbjct: 565 HKD------MDSLEDIDDFLRQAVSDSCEGLMIKSLDSESTYEPQKRSNNWLKFKKDYID 618
Query: 448 A-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 506
G +D++ I + G G+R +L+A+ + P + Y S C+ GTG SD+ L
Sbjct: 619 GMGDSVDLVPIAAFLGKGKRTSVYGSYLLAVYD-PIHEVYQ----SVCKTGTGFSDQTLK 673
Query: 507 AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTI 562
+ L+ E+ + PS Y V++ K PDVW + + K+ LSI S I T
Sbjct: 674 DLFDSLQ------EHTVQNKPSIYVVSD--KFEPDVWFQPAKVWECKAADLSI-SPIHTA 724
Query: 563 RSEVFSA--PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSS--NGTT 607
++ ++ LRFPR R+R DK D ++ S NG +
Sbjct: 725 SQDMTASGKGIGLRFPRFVRLREDKKPMDATTSHQIFDMYESQFKNGAS 773
>gi|168050205|ref|XP_001777550.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671035|gb|EDQ57593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 182/407 (44%), Gaps = 60/407 (14%)
Query: 217 DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFL 275
+ +G V P LA K E E K+DG+R Q+H G I +SR+
Sbjct: 273 NFTLGIPVGPMLAKPTTGVSEVLNKFQDMEFSCEYKYDGERAQVHYLQGGTIEIYSRN-- 330
Query: 276 DHSEYGHAMSKIIEQNVLVDRC--------ILDGEMLVWDTSLNRFAEFGSNQEIAKAAR 327
H K + + RC +LD E++ +D N+ F Q ++ AR
Sbjct: 331 ----AEHNTGKFPDIVAAMPRCMKTGTETYVLDCEVVAYDREKNKILPF---QVLSTRAR 383
Query: 328 DG--LSSDR-QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLN 384
G LS + Q+C FAFD+LY+ ++ + L R ELL + G + +
Sbjct: 384 KGVVLSDIKIQVCLFAFDLLYLNGRPLLKEQLNVRRELLYSSFQEIPGEFQFATAKN--- 440
Query: 385 SHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLK 442
+++++E++KF ++ I + EG+++K L + +EP RS WLKLK
Sbjct: 441 --------------SNDLEEIQKFLEDAINDSCEGLIVKTLSKDATYEPAKRSNNWLKLK 486
Query: 443 PEYIRAGS--DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGL 500
+Y+ G LD++ IG +YG G+R G FL+A D F S C++GTG
Sbjct: 487 KDYMNTGGGDSLDLVPIGAFYGRGKRVGVYGAFLLACY-----DEDREEFQSICKIGTGF 541
Query: 501 SDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSIT 556
+ +AV+ + + + P+ P S+Y+ DVW E E K+ LSI+
Sbjct: 542 T----EAVLEERSVTLKNHVIPQ--PRSYYRYGETIG--VDVWFEDVEVWEVKAADLSIS 593
Query: 557 SDIRTIRSEV-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
R V + SLRFPR+ R+R DK + Q E+ +
Sbjct: 594 PVHRAAVGLVDPNKGISLRFPRLMRLREDKTPVEATSAQQVAEMYRA 640
>gi|304313941|ref|YP_003849088.1| ATP-dependent DNA ligase [Methanothermobacter marburgensis str.
Marburg]
gi|302587400|gb|ADL57775.1| ATP-dependent DNA ligase [Methanothermobacter marburgensis str.
Marburg]
Length = 551
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 132/495 (26%), Positives = 223/495 (45%), Gaps = 73/495 (14%)
Query: 121 SGGLTIKELNDLLDRLA---SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGIS 177
S LT++ + D L LA ++ KI +L ++ + E ++I +L++L++G++
Sbjct: 108 SQPLTVEFVYDKLRSLAFVTGERAQSRKIGILVEVLSQAKPLEARYITRTVLEELRVGVA 167
Query: 178 EKSIFHEFHPDA-------EDLFNVTCDLKLVCE-KLKDRNQRHKRQDIEVGKAVRPQLA 229
E I + E +T DL +V +++ N ++ ++E G+ V+P LA
Sbjct: 168 EGIIRDAISRASGADPALVERAHMLTNDLGMVAAVAMEEGNPGLEKLNLEPGRPVKPMLA 227
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE 289
+A L E K+DG R+QIH+ G EI F+R + + + + +E
Sbjct: 228 QLAESIESAIEDLG--RAFCETKYDGIRVQIHRKGDEISIFTRRLENITAAVPDILEGVE 285
Query: 290 QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR-----QLCYFAFDVL 344
+ + + I++GE++V T R A F Q I + R +R L F FDVL
Sbjct: 286 RALPDEDYIVEGEIIV--TIEGRPASF---QYILQRVRRKYDIERLRRKVPLSLFLFDVL 340
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLE-TLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
Y + +I + L+ER +L+ ++ G +E + + D G NVD
Sbjct: 341 YY-ERPLIDEPLRERRRVLESIISEIPGEIEASRMVDVG----------------PDNVD 383
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGS 463
E F+E+I EGI++KD S + PG R K LK K E LD++++GG YG
Sbjct: 384 EALWLFRESIREGHEGIMIKDTESPYIPGIRGKKMLKFKAE----PETLDLIVVGGTYGR 439
Query: 464 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
G+R + +L+A A D ++ V TGL DE L + +++
Sbjct: 440 GKRAHLIGSYLLA-----ARDDDTGELVTVAHVATGLDDETLQELSERMENL-------- 486
Query: 524 RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 583
+ + RP++ +E I +RS + + YSLRFP + R+R
Sbjct: 487 ----AIERKGRKLSVRPEIILEVAYSEI----------VRSPEYESGYSLRFPVVKRIRD 532
Query: 584 DKPWHDCLDVQSFVE 598
D D +D S +E
Sbjct: 533 DLSPED-IDTVSRIE 546
>gi|158299989|ref|XP_319999.3| AGAP009222-PA [Anopheles gambiae str. PEST]
gi|157013784|gb|EAA15024.3| AGAP009222-PA [Anopheles gambiae str. PEST]
Length = 752
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 127/520 (24%), Positives = 213/520 (40%), Gaps = 95/520 (18%)
Query: 136 LASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEF---------H 186
+ S + A+K+ + ++ E ++II + L++G++E+S+ H
Sbjct: 249 MTGSASMAKKMDKIQSMFVACRHSESRYIIRSLAGKLRIGVAEQSLLQALAQACALTPPH 308
Query: 187 PD----------------------AEDLFNVTCDL----KLVCEKLKDRNQRHKRQ-DIE 219
D A L V C ++V L+ QR +E
Sbjct: 309 ADPPVVNALAGESEARVKARVDEVALALKTVYCQCPNYNRIVPVLLEHGVQRLSEHCPME 368
Query: 220 VGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDH 277
G ++P LA ++ G + E K+DG+R QIH +GS + FSR+ ++
Sbjct: 369 PGTPLKPMLAHPTKGVQEVLQRFDGIDFTCEWKYDGERAQIHLLADGS-VQIFSRNQENN 427
Query: 278 -SEYGHAMSKI-IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQ 335
S+Y ++++ + V ILD E + WDT + F + + Q
Sbjct: 428 TSKYPDVIARLEFTRTEPVASAILDCEAVAWDTDKRQILPFQVLSTRKRKDANEADIKVQ 487
Query: 336 LCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW 395
+C F FD+LY+ ++ + ER ELL + + +G Q +
Sbjct: 488 VCVFMFDLLYLNGEPLVERPFVERRELLYRHFREIEG-----------------QWQYAT 530
Query: 396 SLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDL 452
L ++DE+++F E + EG+++K L + +E RS WLKLK +Y+ G L
Sbjct: 531 RLDTGDLDELQRFLDEAVRGNCEGLMVKTLAREATYEIAKRSRNWLKLKKDYLTGVGDSL 590
Query: 453 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD------ 506
D+++IGGY G G+R G FL+A D + + C++GTG SD++L
Sbjct: 591 DLVVIGGYRGRGKRTGTYGGFLLACY-----DEENEEYQTICKIGTGFSDDDLQRHTEFF 645
Query: 507 --AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRS 564
V+ KPY+R + + PD W E + +L + +
Sbjct: 646 RSHVIAAAKPYYR----------------HEANVVPDDWFEPVQVWEVLCADLSLSPVHR 689
Query: 565 EVFS-----APYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
SLRFPR RVR DK D + E+
Sbjct: 690 AGIGIIDPEKGISLRFPRFIRVREDKGVTDATSARQVSEM 729
>gi|389860326|ref|YP_006362565.1| ATP-dependent DNA ligase [Thermogladius cellulolyticus 1633]
gi|388525229|gb|AFK50427.1| ATP-dependent DNA ligase [Thermogladius cellulolyticus 1633]
Length = 600
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 135/505 (26%), Positives = 229/505 (45%), Gaps = 69/505 (13%)
Query: 124 LTIKELNDLLDRLASSENRAEK---ISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT+ + D R+A ++ K I +LS L+ + + +E ++I+ L+LG+ E +
Sbjct: 118 LTVSRVYDTFVRIAMAQGEGSKDIKIRLLSGLLAEASPKEARYIVRFAEGKLRLGVGEAT 177
Query: 181 IFHEF----------HPDAEDLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVRPQLA 229
+ P E +N+ DL V + + + K VG +RP LA
Sbjct: 178 LMDALAVAFGGGSFARPIIERAYNLRADLGEVARVVATKGIEELKALKPVVGIPIRPMLA 237
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE 289
R + K+ G V E K+DG+R QIHK G E+ FSR + + + ++
Sbjct: 238 ERHNNPKEILEKVGGVGFV-EYKYDGERAQIHKKGDEVVIFSRRLENITHQYPDVVDYVK 296
Query: 290 QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR--DGLSSDRQLC--YFAFDVLY 345
+ V + I++GE++ D F F QE+ R D +S +++ + FD+LY
Sbjct: 297 RGVKAEEAIVEGEIVAIDPDTGEFKPF---QELMHRKRKHDVMSVVKEIPVRVYLFDLLY 353
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
+ + L ER + L++V++ ++G + + A N E+
Sbjct: 354 LNGVDYTVKPLPERRKALEEVIEKNEGL------------------DIAEYITAKNPVEL 395
Query: 406 EKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYG 462
EKFF I + EG+++K + S ++ G R W+K K +Y D +D++++G +YG
Sbjct: 396 EKFFMGAISDGAEGVMVKAIHKDSIYQAGTRGWLWIKFKRDYRSEMIDTVDLVVVGAFYG 455
Query: 463 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
GRRGG+ L+A A + F + C+VG+G +DE+L+ + LKPY + P
Sbjct: 456 RGRRGGKFGALLMA-----AYNEEKDVFETVCKVGSGFTDEDLNQLPDLLKPYIVD-KKP 509
Query: 523 KRAPPSFYQVTNNSKERPDVWIESPEKSIILSI--------TSDIRTIRSEVFSAPYSLR 574
R V +N + PDVW+ + I+ T + +R + A S+R
Sbjct: 510 AR-------VVSNIQ--PDVWVVPKLVAEIIGAELTLSPLHTCAVGKVRGD---AGISIR 557
Query: 575 FPRIDRVRYDKPWHDCLDVQSFVEL 599
FPR R R DK D E+
Sbjct: 558 FPRFIRWRDDKSPEDATTSNELFEM 582
>gi|354543474|emb|CCE40193.1| hypothetical protein CPAR2_102310 [Candida parapsilosis]
Length = 736
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 183/400 (45%), Gaps = 58/400 (14%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHS 278
G ++P LA + ++ E K+DG+R QIH NG ++ +SR+ D S
Sbjct: 364 GIPLKPMLAKPTKSMSEVLDRFQDEKFTCEYKYDGERAQIHLLPNG-DVRIYSRNSEDMS 422
Query: 279 E-YGHAMSKIIEQNVLVDRC--ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR- 334
+ Y +S I E + + ILD E + WD + F Q ++ R ++
Sbjct: 423 QRYPDLISIIKEFSKSQEHTSLILDCEAVAWDRVNKKILPF---QVLSTRKRKDVNESDI 479
Query: 335 --QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGE 392
+C FAFD+LY + S++ +SL ER ++ + P +G+ +
Sbjct: 480 TVHICLFAFDLLYYNNESLLTRSLSERRSIMFAHLHPLEGKFQF---------------- 523
Query: 393 PCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA- 448
S + +++ ++ F +++ + EG+++K L S +EP RS WLKLK +Y+
Sbjct: 524 -ATSKDSTSLEVLQHFLDQSVHDSCEGLMVKMLEGNESYYEPSKRSRNWLKLKKDYLAGV 582
Query: 449 GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAV 508
G LD+++IG Y G G+R G FL+A + D + C++GTG SDE L +
Sbjct: 583 GDSLDLVVIGAYNGKGKRTGTYGGFLLASYNQDTGD-----LETTCKIGTGFSDEMLTQL 637
Query: 509 VTKLKPYFRKYEYPKRAPPSFYQVTN--NSKERPDVWIESPEKSIILSITSDIRTIRSEV 566
KL P + A P Y V + NS PDVW E + +T+D+ S +
Sbjct: 638 YQKLHP-------SEIAKPKEYFVYDKTNSNAVPDVWFEP--TMLFEVLTADLSL--SPI 686
Query: 567 FSAPY-------SLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+ A + SLRFPR R+R DK D E
Sbjct: 687 YKAAHNEYGKGISLRFPRFIRIRDDKGIEDATSSTEIAEF 726
>gi|194901756|ref|XP_001980417.1| GG17130 [Drosophila erecta]
gi|190652120|gb|EDV49375.1| GG17130 [Drosophila erecta]
Length = 805
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 128/508 (25%), Positives = 219/508 (43%), Gaps = 64/508 (12%)
Query: 120 ISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEK 179
+ L ++E+ LL +L E+ +L L K +++ I ++ DL++ +
Sbjct: 139 VQSKLYLQEVEQLLLKLVERTKEDEQTELLHELCSKATDLDLRTFIRLVKHDLRINARAR 198
Query: 180 SIFHEFHPDAEDLFNVTCDLKLVCEKL------KDRNQRHKRQD------IEVGKAVRPQ 227
I F +A + + DL + + KD + K+ + I+V + P
Sbjct: 199 HILDAFGSEAYPAYQSSRDLVAIVGQFAGKDNKKDAHSPIKKANKTNSSAIQVMTPISPM 258
Query: 228 LAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAM 284
LA A++K + E K+DG+R+QIHK G+E +FSR+ +DH A+
Sbjct: 259 LASPCKSVEEAFKK-SPTGLYSEIKYDGERVQIHKQGNEFKFFSRNLKPVVDHK--IRAL 315
Query: 285 SKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGS-----NQEIAKAARDGLSSDRQLCY 338
+ I Q ILD E+++ DT FGS Q A AA +C
Sbjct: 316 KEYIPQAFPGGGEMILDSEIILVDTDTGALLPFGSLGAHKKQTFANAA---------VCL 366
Query: 339 FAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLV 398
F FD + + ++R E+L++ ++P K SHV + S
Sbjct: 367 FVFDCILYDGEDLTQLPFRKRREILEQNIQPIK-------------SHV----QLSESEF 409
Query: 399 AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI---RAGSDLDVL 455
E+ + EG+VLK S ++PG R+ WLK+K +Y+ + D++
Sbjct: 410 LKTTKELAVMTARVLHANLEGVVLKSPTSTYQPGKRN--WLKVKKDYLFDGKMADTADLV 467
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
++G +YGSG++GG ++ FL+ D + R + + +V +GL D V L
Sbjct: 468 VLGAWYGSGKKGGTLSIFLMGCY-----DAFGRLWKTVTKVHSGLDDATNAEVHESLIKL 522
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRF 575
+ + A PS+ + + PDV + P K + IT T ++ S+RF
Sbjct: 523 TERAD--ANAIPSWLLCSKSL--VPDVLAKDPLKMPVWEITGAEFTKSDAHTASGISIRF 578
Query: 576 PRIDRVRYDKPWHDCLDVQSFVELVHSS 603
PRI R R DK + D+ ++ +S
Sbjct: 579 PRITRRRSDKSAKEANDLAHLEDIFEAS 606
>gi|302348983|ref|YP_003816621.1| ATP-dependent DNA ligase [Acidilobus saccharovorans 345-15]
gi|302329395|gb|ADL19590.1| ATP-dependent DNA ligase [Acidilobus saccharovorans 345-15]
Length = 607
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 144/568 (25%), Positives = 252/568 (44%), Gaps = 75/568 (13%)
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGG 123
G+ + +L + AL K D +L++ + G A + + GG
Sbjct: 65 GVGDKLLVQAI--ALAYGKSEGDVQKLVD-KLGDPGKVAEQLAQTGGHLKSNLLTFMGGG 121
Query: 124 ---LTIKELNDLLDRLASS---ENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGIS 177
LT+ + D ++A + +R K+ L+ L+K E ++I+ + L+LGI
Sbjct: 122 SSQLTVSRVFDSFMKIAYATGESSRDLKLKTLAGLLKDAKPIEARYIVRFVEGRLRLGIG 181
Query: 178 EKSIFHEF------HPDAEDL----FNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVRP 226
+ +I DL +N+ DL + + + + + K EVG +RP
Sbjct: 182 DATILDALAVAYGGSSAVRDLIERAYNLRADLGEIAKIVATQGVEALKGLKPEVGTPIRP 241
Query: 227 QLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSK 286
LA R D K+ GK V E K+DG+R QIHK+G +I FSR D + ++
Sbjct: 242 MLAERANDVKEILAKVGGKAYV-EYKYDGERGQIHKDGDKIKIFSRRLEDITPMYPDIAD 300
Query: 287 IIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR----DGLSSDRQLCYFAFD 342
+ + + + I++GE++ D F QE+ + R + + + F FD
Sbjct: 301 GVREAIKAKKAIVEGEIVAIDPDTGELRPF---QELMQRRRKYDIEKMMKEIPTRLFLFD 357
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
++ D + + L R ++L+ +++P+ D + S+ +P
Sbjct: 358 IIMKDDEDLTTRPLPYRRKVLESILEPN---------DRVVMSNYIASSDP--------- 399
Query: 403 DEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGG 459
DE+ FF + I + EG+++K + S + G R W+KLK +Y SD +D++ +G
Sbjct: 400 DEIMNFFLQAIADGAEGVMIKAIHDESVYRAGVRGWLWVKLKRDYRSEMSDTVDLVAVGA 459
Query: 460 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
+YG G+RGG++ L+A A P D F + C+VG+G +DE+++ + KPY +
Sbjct: 460 FYGKGKRGGKLGTLLLA-AYDPNNDV----FKTVCKVGSGFTDEDINNMYDLFKPYIIDH 514
Query: 520 EYPKRAPPSFYQVTNNSKERPDVWIE--------SPEKSIILSITSDIRTIRSEVFSAPY 571
+P+ V +N DVW E E ++ + T + +R A
Sbjct: 515 RHPR--------VVSNLDA--DVWFEPVKVAEVIGAELTLSPAHTCCMDAVRK---GAGI 561
Query: 572 SLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
S+RFPR R R DK D Q +E+
Sbjct: 562 SIRFPRFIRWRDDKGPEDATTEQELLEM 589
>gi|254166594|ref|ZP_04873448.1| DNA ligase I, ATP-dependent superfamily [Aciduliprofundum boonei
T469]
gi|289596489|ref|YP_003483185.1| DNA ligase I, ATP-dependent Dnl1 [Aciduliprofundum boonei T469]
gi|197624204|gb|EDY36765.1| DNA ligase I, ATP-dependent superfamily [Aciduliprofundum boonei
T469]
gi|289534276|gb|ADD08623.1| DNA ligase I, ATP-dependent Dnl1 [Aciduliprofundum boonei T469]
Length = 590
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 133/530 (25%), Positives = 236/530 (44%), Gaps = 69/530 (13%)
Query: 103 GNFPMVAAEVLQR-RQGMI-----SGGLTIKELNDLLDRLASSE---NRAEKISVLSTLI 153
G+ VA E +++ RQ + LT++++ + +++A +E ++ KI +L+ L+
Sbjct: 88 GDLGSVAEEAIKKKRQTTLFSFEEEKNLTVEKVYENFEKIAKAEGPGSQDRKIQLLAELL 147
Query: 154 KKTNAQEMKWIIMIILKDLKLGISEKSIF----------HEFHPDAEDLFNVTCDLKLVC 203
E K+I+ + L+LGI++ +I E E +N+ DL +
Sbjct: 148 NLAKPIEAKYIVRTVEGKLRLGIADMTILDALSIAYGRTKELRSLVERTYNIHPDLGYIA 207
Query: 204 EKL-KDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK 262
+KL K+ K IE+G +R LA R+ K+ GK E K+DG RIQ H
Sbjct: 208 KKLAKEGIDGVKDIKIELGIPIRAMLAERLPSLEEILAKMGGK-AAFEYKYDGMRIQGHV 266
Query: 263 NGSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEF------ 316
++ +SR + + + + +++ I DGE + D F
Sbjct: 267 GKDKVWLYSRRLENLTSQFPDVVEALKEAFQGKEGIFDGEAVPVDIHTGELLPFQVVSHR 326
Query: 317 -GSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLE 375
G EI KA D + F FD++Y+ + + ER ++L++V+ P+ E
Sbjct: 327 RGRKYEIEKAI-----EDYPVVLFLFDIIYLDGEDLTSKPYPERRKILERVINPT----E 377
Query: 376 TLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGD 433
+ H +V+ ++ E+ +FF + IE+ EG+V K +G S + G
Sbjct: 378 RVKFAH--------------RIVSSDIGEIREFFNKAIEDGCEGLVAKSIGKESIYRAGA 423
Query: 434 RSGKWLKLKPEY-IRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFIS 492
R W+K K +Y + G +D++++G + G G+R G L+A A P D RF +
Sbjct: 424 REFLWIKYKRDYKVEMGDTVDLVVVGAFAGKGKRKGTYGALLMA-AYNPEKD----RFET 478
Query: 493 FCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSII 552
C++G+G +DE+L + K F + + P + ++ + P V +E I
Sbjct: 479 VCKLGSGFTDEQLAYLPRK----FEDLKIENKHPRVWSEMEADYWFVPKVVLEVIGAEIT 534
Query: 553 LSITSDIRTIRSEVF--SAPYSLRFPRID-RVRYDKPWHDCLDVQSFVEL 599
LS T T +V ++RFPR R R DK + + +E+
Sbjct: 535 LSPT---HTCARDVIEKGTGLAIRFPRFTGRWRDDKSPEEATTTKELIEM 581
>gi|380029885|ref|XP_003698595.1| PREDICTED: DNA ligase 1-like, partial [Apis florea]
Length = 672
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 179/408 (43%), Gaps = 65/408 (15%)
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-KNGSEIHYFSRSFLD 276
I G ++P LA + G + E K+DG+R QIH +I +SR+ +
Sbjct: 288 ITPGIPMKPMLAHPTKGVQEVLTRFDGLKFTCEWKYDGERAQIHFAEDGKISIYSRNQEN 347
Query: 277 H-SEYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR-DGLSSD 333
+ S+Y + + Q V CILD E + WD + F Q ++ R D SD
Sbjct: 348 NTSKYPDIIGRFKNTQGENVKSCILDCEAVAWDNDKKQILPF---QVLSTRKRKDANESD 404
Query: 334 --RQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
Q+C F FD+LY+ ++ Q +R ELL++ K G +
Sbjct: 405 IKVQVCVFMFDLLYLNGEPLVQQPFIKRRELLKENFKEVIGEWKFAT------------- 451
Query: 392 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAG 449
SL +++V+ F E+++ EG+++K L + +E RS WLKLK +Y+
Sbjct: 452 ----SLDTSTMEQVQDFLDESVKGNCEGLMVKTLEEEATYEIAKRSRNWLKLKKDYLDGV 507
Query: 450 SD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAV 508
SD LDV++IGGY G G+R G FL+A D + S C++GTG S+E+L
Sbjct: 508 SDTLDVVVIGGYIGKGKRTGTYGGFLLACY-----DQENEEYQSICKIGTGFSEEDLQ-- 560
Query: 509 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE--------------SPEKSIILS 554
K +F+ EY S+Y+ +S PD W E SP +
Sbjct: 561 --KHTEFFK--EYIISQTKSYYRY--DSSLEPDHWFEPIQVWEIKCADLSLSPVHKAAVG 614
Query: 555 ITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
I + I SLRFPR R+R DK D Q + ++
Sbjct: 615 IVDPEKGI---------SLRFPRFVRIRDDKNSDDATSAQQVASMYNN 653
>gi|313235968|emb|CBY25113.1| unnamed protein product [Oikopleura dioica]
Length = 1020
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 132/523 (25%), Positives = 230/523 (43%), Gaps = 86/523 (16%)
Query: 135 RLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSI---------FHEF 185
+++ + ++ K+ ++ L+ E +++I L++G+SE ++ FHE
Sbjct: 540 KVSGNSSQNTKVDLIKGLLVACVGPEARFLIRSCAGKLRIGVSESTVLSALARAIVFHEL 599
Query: 186 HPDAEDLFN-------------VTCDL---KLVCEKLKDRNQRHKRQDIEV--GKAVRPQ 227
+ F C+L K++ L + + + + G ++P
Sbjct: 600 GETKKGKFTKERYDIVEAKVKEAYCELPNYKIIINALLTHGSENLAEHVSLQPGVPLKPM 659
Query: 228 LAMRIGDAHAAWRKL-HGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDH-SEYGHA 283
LA + G E E K+DG+R QIH ++GS +SR+ D+ S+Y
Sbjct: 660 LAHPTKAITEILTRFGAGAEFTAEYKYDGERAQIHLLEDGS-FRVYSRNQEDNTSKYPDV 718
Query: 284 MSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD--RQLCYFAF 341
MS++ V ++D E + WD + + F + +D ++S+ Q+C AF
Sbjct: 719 MSRMPNCINNVTSAVIDSESVAWDPATKQILPF--QVLTTRKRKDAVASEIKVQVCIHAF 776
Query: 342 DVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHN 401
D+LY+ S++ +SL+ER ELL K +G + + R E
Sbjct: 777 DLLYLNGESLVKKSLRERRELLHTHFKSIEGEF--------VFATARDMSE--------- 819
Query: 402 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAG--SDLDVLIIGG 459
+DE++ F + +++ EG+++K L +E RS WLKLK +Y+ +G +DVL++G
Sbjct: 820 IDELQVFLDQAVKDSTEGLMVKALEDSYEISKRSHSWLKLKKDYLGSGVADSVDVLVMGA 879
Query: 460 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
YYG G+R G FL+ + D + + C++GTGL+DE L + +
Sbjct: 880 YYGKGKRSGNYGGFLLGVF-----DADNEEYQTVCKLGTGLTDENL-----------KLF 923
Query: 520 EYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVF--SAPYS 572
P++ +V + DV+ E PE K LSI S + T + + + S
Sbjct: 924 TEPRKNRTIVLEVFS-----ADVYFE-PEMVWEIKCADLSI-SPVHTAATGLADPAKGIS 976
Query: 573 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGG 615
LRFPR R R DK E+ ++S Q GG
Sbjct: 977 LRFPRFIRERDDKSPEMATSADQIYEM-YNSQDVIQNSAARGG 1018
>gi|16905197|gb|AAL31067.1|AC090120_13 putative DNA ligase [Oryza sativa Japonica Group]
gi|31432783|gb|AAP54376.1| DNA ligase, putative, expressed [Oryza sativa Japonica Group]
gi|40539108|gb|AAR87364.1| putative DNA ligase [Oryza sativa Japonica Group]
Length = 810
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 177/380 (46%), Gaps = 47/380 (12%)
Query: 220 VGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDH 277
+G V P LA K G E E K+DG+R QIH ++GS Y + +
Sbjct: 431 IGVPVGPMLAKATKSVSEIIDKFQGLEYTCEYKYDGERAQIHCLEDGSVEIYSRNAERNT 490
Query: 278 SEYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS-SDRQ 335
+Y + + + V +LD E++ +D + F Q ++ AR G++ SD +
Sbjct: 491 GKYPDVVDAVSRFRKPTVKSFVLDCEIVAYDREKKKILPF---QILSTRARKGVTISDIK 547
Query: 336 --LCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEP 393
+C F FD+LY+ ++ + LK R E L + G +
Sbjct: 548 VSVCTFGFDILYINGKPLLQEQLKVRREHLYNSFEEVPGVFQL----------------- 590
Query: 394 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GS 450
S+ +++++E++KF + + EG+++K L + +EP RS WLKLK +Y+ + G
Sbjct: 591 ATSITSNDLEEIQKFLDTAVNSSCEGLIIKTLDKDATYEPAKRSNNWLKLKKDYMDSIGD 650
Query: 451 DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVT 510
LD++ I ++G G+R G FL+A D + + C +GTG S+++L+
Sbjct: 651 SLDLVPIAAFHGRGKRTGVYGSFLLACY-----DEQNEEYQTICNIGTGFSEQQLEERSV 705
Query: 511 KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV 566
L R PK P ++Y+ + PDVW E E K+ LSI+ R V
Sbjct: 706 SL----RTKAIPK--PKAYYRFADTMD--PDVWFEPSEVWEVKAADLSISPVHRAANGIV 757
Query: 567 -FSAPYSLRFPRIDRVRYDK 585
+ SLRFPR+ RVR DK
Sbjct: 758 DPNKGISLRFPRLLRVRDDK 777
>gi|198450544|ref|XP_002137109.1| GA26759 [Drosophila pseudoobscura pseudoobscura]
gi|198131083|gb|EDY67667.1| GA26759 [Drosophila pseudoobscura pseudoobscura]
Length = 788
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/507 (24%), Positives = 212/507 (41%), Gaps = 68/507 (13%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
L + E+ LL +L E+ +L L KK +++ I ++ +DL++ + I
Sbjct: 123 LYLHEVEKLLTQLEERTKEDEQTELLQELCKKATDLDLRTFIRLVKQDLRINARARHILD 182
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKR--------------QDIEVGKAVRPQLA 229
F PDA + + DL + E+ + + I+V + P LA
Sbjct: 183 AFGPDAYPAYQSSRDLSAIVEQFSGKGNKTSTLGQVKKTKKVGLSGGGIQVMTPISPMLA 242
Query: 230 MRIGDAHAAWRK----LHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGH 282
A++K L+G E K+DG+R+QIHK G+E +FSR+ +DH +
Sbjct: 243 NACKSVEEAFKKSPSGLYG-----EVKYDGERVQIHKQGTEFKFFSRNLKPVMDH-KIKA 296
Query: 283 AMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFD 342
I ILD E+++ DT FG+ A + ++ +C F FD
Sbjct: 297 LKDHIPRAFPGAGDMILDSEIILVDTESGAMLPFGT----LGAHKKQTFANASVCLFVFD 352
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
+ + +R ++L++ + P L S+V + S
Sbjct: 353 CILYDGKDLTQLEFHKRRKILEENINP-------------LKSYV----QLSESQFLKTK 395
Query: 403 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGG 459
+E+ + + EG+VLK ++PG R+ WLK+K +Y+ G D++++G
Sbjct: 396 NELAMMTAKVLHANLEGVVLKSPNGIYQPGKRN--WLKVKKDYLFEGKMADTADLVVLGA 453
Query: 460 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSD---EELDAVVTKLKPYF 516
+YGSG++GG ++ FL+ D R + + +V +GL D EE+ + KL
Sbjct: 454 WYGSGKKGGVLSIFLMGCY-----DARDRLWKTVTKVHSGLDDATNEEIHGSLMKLTERA 508
Query: 517 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 576
+ P + PDV + P + IT T +A S+RFP
Sbjct: 509 DANKTPN-------WLLCKKSLVPDVLAKDPASMPVWEITGAEFTKSEAHTAAGISIRFP 561
Query: 577 RIDRVRYDKPWHDCLDVQSFVELVHSS 603
RI R+R DK + D+ L +S
Sbjct: 562 RITRLRSDKTAKEANDLAHLENLYDAS 588
>gi|449017186|dbj|BAM80588.1| DNA ligase I [Cyanidioschyzon merolae strain 10D]
Length = 1028
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 137/527 (25%), Positives = 229/527 (43%), Gaps = 87/527 (16%)
Query: 124 LTIKELNDLLDRLASSENRA---EKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LTI+ + + L +A + +A EK + L+ E K+I + L++ ++EK+
Sbjct: 507 LTIRNVYNELLAIARASGKAMQEEKRRRIQKLLVAAKNNEAKFIARALQGRLRIRLAEKT 566
Query: 181 IFHEF--------------HPDAEDL----------FNVTCDLKLVCE---KLKDRNQRH 213
+ HPDA + N ++ E +L+D ++R
Sbjct: 567 VILALAAAFVQNAAASRGTHPDAARVERAAHLLRTSSNECPSWNMITEALLELQDIDERL 626
Query: 214 -KRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYF 270
+R + G V P LA + G E K+DG+R QIH +GS I +
Sbjct: 627 LERCHLTPGLPVMPMLAKPSRSIAEVLTRFEGMRFTCEYKYDGERAQIHGLADGS-IRIY 685
Query: 271 SRSFLDHS-EYGHAMSKIIE---QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAA 326
SR+ DH+ +Y M +I++ + ILD E++ +D R F Q I + A
Sbjct: 686 SRNAEDHTRKYPDVMEQILQAVGSSSDQPSFILDSEVVAFDRDAQRILPF---QYIQQRA 742
Query: 327 RDGLSSD---RQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGL 383
R +S D + AFD+LY + + L ER +L+ + G G
Sbjct: 743 RKHVSLDDLKTNVLIVAFDILYWRGEPLTRKPLAERRAILRDAFQEVPG---------GF 793
Query: 384 NSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLK 440
R ++D ++KF +E + + EG+++K L S +EP +R+ WLK
Sbjct: 794 RFATRRD--------VSDLDGIQKFMEEAVRDSCEGLMVKALEGPLSTYEPANRTQHWLK 845
Query: 441 LKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 499
LK +Y+R G LD++ IG YYG G+R G FL+A P+T +F + RVGTG
Sbjct: 846 LKKDYLRTIGDTLDLVPIGAYYGRGKRTGWFGSFLLACYN---PET--EQFEAVTRVGTG 900
Query: 500 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDI 559
S+E++ + ++ Y P V + +PD+W++ + + +D+
Sbjct: 901 FSEEQMAQLHSEYAQYVLDSPRP--------YVACSESVKPDIWLDP--RQVWEVQCADL 950
Query: 560 RTIRSEVFSAPY-------SLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+ V + Y S+RFPR+ R+R DK D E+
Sbjct: 951 SISPAYVAACGYIAPDKGISVRFPRLLRIRSDKRPEDATTSAQLAEM 997
>gi|224106842|ref|XP_002314303.1| predicted protein [Populus trichocarpa]
gi|222850711|gb|EEE88258.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 179/379 (47%), Gaps = 47/379 (12%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHS 278
G V P LA K E E K+DG+R QIH +NGS Y S +
Sbjct: 306 GVPVGPMLAKPTKGVSEIVTKFQDMEFSCEYKYDGERAQIHYLENGSVEIYSRNSERNTG 365
Query: 279 EYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGL-SSDRQL 336
++ ++ I + ILD E++ +D + F Q ++ AR + SD ++
Sbjct: 366 KFPDVVAVISRLKRPSASSFILDCELVAYDREKKKILPF---QILSTRARKNVVMSDIKV 422
Query: 337 --CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPC 394
C +AFD+LY+ D +I + LK R E L + G +
Sbjct: 423 NVCIYAFDMLYLNDQPLIQKELKVRREHLYSSFEEEPGFFQF-----------------A 465
Query: 395 WSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSD 451
++ +++++E++KF ++ EG+++K + + +EP RS WLKLK +Y+ + G
Sbjct: 466 TAITSNDLEEIQKFLDTAVDASCEGLIIKTMNKDATYEPSRRSHNWLKLKKDYMESIGDS 525
Query: 452 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 511
LD++ IG ++G G+R G FL+A ++ F S C++GTG S++ L+
Sbjct: 526 LDLVPIGAFHGRGKRTGVYGAFLLACY-----NSNNEEFQSICKIGTGFSEQVLEERSAS 580
Query: 512 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV- 566
L R PK P S+Y+ + K PDVW E E K+ L+I+ R EV
Sbjct: 581 L----RSQVIPK--PKSYYRFGDTIK--PDVWFEPKEVWEVKAADLTISPVHRAAIGEVD 632
Query: 567 FSAPYSLRFPRIDRVRYDK 585
+ SLRFPR+ RVR DK
Sbjct: 633 PNKGISLRFPRLVRVREDK 651
>gi|402079070|gb|EJT74335.1| DNA ligase 1 [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 944
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 130/510 (25%), Positives = 224/510 (43%), Gaps = 98/510 (19%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH-----PDAEDLFNVTCDLK 200
K E K+++ + L+LG++E+++ HE P D+ LK
Sbjct: 447 KGGPSEAKYLVRFLEGKLRLGLAERTVLVSLAQAIIAHEATQKGNVPSPSDVEKAEAMLK 506
Query: 201 LVCEKLKDRNQ------RHKRQDIE------VGKAVRPQLAMRIGDAHAAWRKLHGKEVV 248
V +L H +++ G ++P LA + +
Sbjct: 507 TVYSELPSYETIIPAVLEHGIMNLKENCKLRPGIPLKPMLAKPTKAITEVLDRFENQTFT 566
Query: 249 IECKFDGDRIQIH---KNGSE-----------------IHYFSRSFLDHSE-YGHAMSKI 287
E K+DG+R QIH K+ E FSR+ D S+ Y ++K+
Sbjct: 567 CEYKYDGERAQIHYVAKDADEELSQSLPGANKTTGAGVAAIFSRNSEDLSKKYPDILAKL 626
Query: 288 ---IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFD 342
I+++ +LD E + WD + F Q + + +D D ++ C FAFD
Sbjct: 627 HTWIKEDT--KSFVLDCETVAWDVVEKKVLPF--QQLMTRKKKDVKIEDVKVKVCVFAFD 682
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
+LY+ +V+ +SL+ER ELL +P +G + L +H+ +
Sbjct: 683 LLYLNGEAVVEKSLRERRELLAASFEPVEG-------EFALATHMN----------GREL 725
Query: 403 DEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIG 458
DE++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G
Sbjct: 726 DEIQTFLDESVKASCEGLMVKMLDGAESGYEPSKRSRNWLKIKKDYLSGIGDSLDLVVLG 785
Query: 459 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 518
Y+G G+R FL+A P+ DTY + C +GTG S+ L+ + ++LK
Sbjct: 786 AYHGKGKRTSVYGAFLLACY-NPSSDTYE----TICNIGTGFSEAVLEELHSQLKDTV-- 838
Query: 519 YEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSE----VFSA 569
+ PK FY ++ + +PDVW+E P K+ L+++ + E +
Sbjct: 839 IDRPK----PFYSHSSGGQHQPDVWLE-PRLVWEVKTADLTLSPRYKAGCGEGVDPAGAK 893
Query: 570 PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
SLRFPR ++R DK + + E+
Sbjct: 894 GISLRFPRFIKLRDDKKPDEATSSRQVAEM 923
>gi|20271416|gb|AAH28287.1| Lig1 protein [Mus musculus]
Length = 916
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 150/604 (24%), Positives = 249/604 (41%), Gaps = 112/604 (18%)
Query: 43 VDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNA 102
V Y S RL P E G+ + VL + A G +S +R KG A
Sbjct: 328 VLYLSLNRLGPPQQGLE---LGVGDGVLLKAVAQATGRQLES---IRAEVAEKGDVGLVA 381
Query: 103 GNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMK 162
N +L ISG T + D+ RL S + A+K+ ++ L E +
Sbjct: 382 ENSRSTQRLMLPPPPLTISGVFT--KFCDIA-RLTGSASMAKKMDIIKGLFVACRHSEAR 438
Query: 163 WIIMIILKDLKLGISEKSIFH------EFHPDAEDLFNVTCD------------------ 198
+I + L+LG++E+S+ P ++ D
Sbjct: 439 YIARSLSGRLRLGLAEQSVLAALAQAVSLTPPGQEFPTAVVDAGKGKTAEARKMWLEEQG 498
Query: 199 ----------------LKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
+ ++ E +R H + + G ++P LA ++
Sbjct: 499 MILKQTFCEVPDLDRIIPVLLEHGLERLPEHCK--LSPGVPLKPMLAHPTRGVSEVLKRF 556
Query: 243 HGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHS-EYGHAMSKIIE-QNVLVDRCIL 299
+ E K+DG R QIH G E+ FSR+ D++ +Y +S+I + ++ V IL
Sbjct: 557 EEVDFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKHPSVTSFIL 616
Query: 300 DGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKER 359
D E + WD + F + D Q+C +AFD++Y+ S++ Q L R
Sbjct: 617 DTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVRQPLSRR 676
Query: 360 HELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW--SLVAHNVDEVEKFFKETIENRD 417
+LL++ + V +GE + SL + +++ +F ++++++
Sbjct: 677 RQLLRE-------------------NFVETEGEFVFTTSLDTKDTEQIAEFLEQSVKDSC 717
Query: 418 EGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFL 474
EG+++K D+ + +E RS WLKLK +Y+ G LD+++IG Y G G+R G FL
Sbjct: 718 EGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFL 777
Query: 475 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK----PYFRKYEYPKRAPPSFY 530
+A A D + C++GTG SDEEL+ L+ P R Y
Sbjct: 778 LA-----AYDEESEELQAICKLGTGFSDEELEEHHQSLQALVLPTPRPY----------- 821
Query: 531 QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---------YSLRFPRIDRV 581
V + PD W++ SI+ + ++ S ++ A SLRFPR RV
Sbjct: 822 -VRIDGAVAPDHWLDP---SIVWEVKCADLSL-SPIYPAARGLVDKEKGISLRFPRFIRV 876
Query: 582 RYDK 585
R DK
Sbjct: 877 RKDK 880
>gi|332295117|ref|YP_004437040.1| DNA ligase [Thermodesulfobium narugense DSM 14796]
gi|332178220|gb|AEE13909.1| DNA ligase [Thermodesulfobium narugense DSM 14796]
Length = 624
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 130/539 (24%), Positives = 242/539 (44%), Gaps = 70/539 (12%)
Query: 103 GNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQ 159
G+ +VA +++ +Q L++ E+ + L +A + ++ +KI +L+ ++ + ++
Sbjct: 97 GDLGLVAKNIVKDKQS----SLSLNEVFNYLKTIALTSGPSSQDKKIELLTEMLDRASSL 152
Query: 160 EMKWIIMIILKDLKLGISEKSIFH----------EFHPDAEDLFNVTCDLKLVCEKL-KD 208
E +I+ IIL L+LG + ++ + P E +N+T DL V L K+
Sbjct: 153 EALYIVRIILGRLRLGAQDATVIEALSFARVKSKDLKPKIERCYNLTSDLGYVAYMLFKE 212
Query: 209 RNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIH 268
+ VG +R LA R+ + + KL GK ++E K+DG R Q+HK G ++
Sbjct: 213 GEEALDFVHAIVGNPIRMALAERMENPEEIFNKL-GK-CIVEPKYDGFRCQVHKIGDKVK 270
Query: 269 YFSRSFLDHSEYGHAMSKIIEQNVLVDR---CILDGEMLVWDTSLNRFAEFG-SNQEIAK 324
+SR+ D++ H +I+E + R CI +GE + +D RF F + Q K
Sbjct: 271 IYSRNLEDNT---HMFPEIVESTIKYCRAKNCIFEGEAISFDPKTLRFMPFQITVQRKRK 327
Query: 325 AARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLN 384
+++ L FD+LY D + + L ER LL + + +T+V
Sbjct: 328 HNILKVAAKFPLRLEVFDLLYKDDLDITSKPLFERKRLLNDTILKN----DTIVISD--- 380
Query: 385 SHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPE 444
S A + + ++ F++ + EGI++K L ++ G R+ W+KLK
Sbjct: 381 -----------SSEADSPERIKSLFEKYVSEGMEGIMIKRLDGVYQAGSRNFNWIKLKRS 429
Query: 445 YIRA--GSDLDVLIIGGYYGSGRR-GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLS 501
++ +D +I+G +YG G+R + L+ L P D F + ++G+G +
Sbjct: 430 MKQSILSDTIDAVIMGYFYGKGQRIKLGIGSLLIGLY-NPEMDC----FETIAKLGSGFT 484
Query: 502 DE---ELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSD 558
+E EL + +++ F+ Y + P F+ +P + +E I +S
Sbjct: 485 EEEWVELLKNLEEIRTSFKPNNYISKINPDFWV-------KPKIVVEVEADEITVSPVHT 537
Query: 559 I-------RTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKG 610
+ ++ + + ++LRFPR R+RYDK D E+ S K
Sbjct: 538 VGRKELGNDSLNTLSSGSGFALRFPRAKRIRYDKSPFDSTTPNEIFEMFEISKNKKSKN 596
>gi|296812721|ref|XP_002846698.1| DNA ligase [Arthroderma otae CBS 113480]
gi|238841954|gb|EEQ31616.1| DNA ligase [Arthroderma otae CBS 113480]
Length = 890
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 193/441 (43%), Gaps = 71/441 (16%)
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH---------------- 261
++ G ++P LA + GK E K+DG+R QIH
Sbjct: 479 LQPGVPLKPMLAKPTKSISEVLDRFEGKHFTCEYKYDGERAQIHYVSRDTIKDYPAASAA 538
Query: 262 --KNGSEIH-YFSRSFLDHSEYGHAMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFAEF 316
K+G + FSR+ D S+ + + +E V +LD E + WDT + F
Sbjct: 539 LQKDGEGLSAIFSRNSEDLSKKYPDILEKLETWVKPGTQSFVLDCETVAWDTVNKKVLPF 598
Query: 317 GSNQEIAKAARDGLSSD--RQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRL 374
Q + + +D S D ++C FAFD+L++ + +SL+ER +LL P +G
Sbjct: 599 --QQLMTRKRKDVKSEDIKVKVCVFAFDLLFLNGEPTVKKSLRERRDLLHDAFVPIEG-- 654
Query: 375 ETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEP 431
E HG S +++E++ E+++ EG+++K L S +EP
Sbjct: 655 EFAFAQHGNTS---------------DLEEIQTMLDESVKASCEGLMVKMLDTEDSGYEP 699
Query: 432 GDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRF 490
RS WLK+K +Y+ G LD++++G Y+G G+R FL+A A +T + +
Sbjct: 700 SKRSRNWLKVKKDYLAGIGDSLDLVVLGAYFGRGKRTSVYGAFLLA-----AYNTKTQNY 754
Query: 491 ISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-- 548
+ C +GTG S+ L+ + L P P FY + K++PDVW E P+
Sbjct: 755 ETICNIGTGFSEALLEELHETLSPLVID------KPKPFYSHSTVPKDQPDVWFE-PKFV 807
Query: 549 ---KSIILSITSDIRTIRSEVF-------SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVE 598
K+ L+++ EV + SLRFPR + R DK ++ E
Sbjct: 808 WEVKAADLTLSPRYSAASDEVMGNTGGSTAKGISLRFPRYIKARDDKKPDQATTTKAVAE 867
Query: 599 LVHSSNGTTQKGKEYGGLQDD 619
+ T+ + G + DD
Sbjct: 868 MYRRQESVTKDASK-GAVDDD 887
>gi|383852354|ref|XP_003701693.1| PREDICTED: DNA ligase 1-like [Megachile rotundata]
Length = 831
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 183/413 (44%), Gaps = 75/413 (18%)
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFL 275
I G ++P LA + G + E K+DG+R QIH +NG +I +SR+
Sbjct: 447 ITPGIPMKPMLAHPTKGVQEVLTRFEGLKFTCEWKYDGERAQIHFAENG-DISIYSRNQE 505
Query: 276 DH-SEYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR-DGLSS 332
++ S+Y + + + V CILD E + WD F Q ++ R D +
Sbjct: 506 NNTSKYPDIIGRFKNTKGESVKSCILDCEAVAWDNENKHILPF---QVLSTRKRKDANEA 562
Query: 333 D--RQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQ 390
D Q+C F FD+LY+ ++ Q +R ELL++ K +G
Sbjct: 563 DIKVQVCVFMFDLLYLNGEPLVQQPFVKRRELLKENFKDVEGE----------------- 605
Query: 391 GEPCW----SLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPE 444
W SL ++++V+ F E+++ EG+++K L + +E RS WLKLK +
Sbjct: 606 ----WKFANSLDTSSMEQVQDFLDESVKGNCEGLMVKTLEQDATYEIAKRSRNWLKLKKD 661
Query: 445 YIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDE 503
Y+ G LDV++IGGY G G+R G FL+A D + S C++GTG ++E
Sbjct: 662 YLDGVGDTLDVVVIGGYIGKGKRTGTYGGFLLACY-----DQENEEYQSICKIGTGFTEE 716
Query: 504 ELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE--------------SPEK 549
+L K + +++ P S+Y+ +S +PD W E SP
Sbjct: 717 DLQ----KHSEFLKEHIIPTNK--SYYRY--DSSLQPDHWFEPVQVWEIKCADLSLSPVH 768
Query: 550 SIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
+ I + I SLRFPR R+R DK D Q + +S
Sbjct: 769 KAAVGIVDPEKGI---------SLRFPRFIRIRDDKNSEDATSAQQVATMYNS 812
>gi|71663975|ref|XP_818973.1| DNA ligase I [Trypanosoma cruzi strain CL Brener]
gi|70884254|gb|EAN97122.1| DNA ligase I, putative [Trypanosoma cruzi]
Length = 699
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 186/410 (45%), Gaps = 48/410 (11%)
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH---KNGSEIHYFSRSF 274
I G V+PQLA +A + GK E K+DG+R QIH + G +I FSR+
Sbjct: 322 IRPGIPVKPQLAHPTSGINAILERFQGKAFTSEYKYDGERAQIHYSKEKGYQI--FSRNA 379
Query: 275 LDHS-EYGH--AMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS 331
H+ +Y AM + V+ I+D E++ + F Q + S
Sbjct: 380 ETHTGKYPDIIAMLPRVFSTEAVESFIIDSEVVAVNKETGALQAFQVLQHRGRKNVSFES 439
Query: 332 SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
+C FAFD+LY + + + L ER ++L P + +H
Sbjct: 440 VTIPVCVFAFDILYFNGSPQMTKPLLERRQVLYSYFTPIHAAFQ--FAEH---------- 487
Query: 392 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAG 449
L +V+E++ F +I++ EG+++K L + + P RS WLKLK +Y+
Sbjct: 488 -----LDGTDVEEIQSFLDRSIKDGCEGLMVKTLKEEAAYTPAKRSYCWLKLKKDYMDGV 542
Query: 450 SD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAV 508
+D LD++ IG YYG G+R G FL+A + + F S C++G+G DE+L+++
Sbjct: 543 TDTLDLVPIGAYYGKGKRTGVFGGFLLACYNSDSDE-----FQSICKIGSGFLDEQLESL 597
Query: 509 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVF- 567
L+ + P +Y+ ++E+PDVW+E+ + + I + +
Sbjct: 598 TQALQSCVLMEQ------PRYYR----AEEKPDVWLEASNVWEVKAADLSISPVHFAAYG 647
Query: 568 ----SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEY 613
S +LRFPR RVR DK ++ + + + + + +EY
Sbjct: 648 LVDPSKGIALRFPRFVRVREDKKANEATFATQIAAMYTAQSLSRKNYEEY 697
>gi|407851837|gb|EKG05546.1| DNA ligase I, putative [Trypanosoma cruzi]
Length = 701
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 186/410 (45%), Gaps = 48/410 (11%)
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH---KNGSEIHYFSRSF 274
I G V+PQLA +A + GK E K+DG+R QIH + G +I FSR+
Sbjct: 322 IRPGIPVKPQLAHPTSGINAILERFQGKAFTSEYKYDGERAQIHYSKEKGYQI--FSRNA 379
Query: 275 LDHS-EYGH--AMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS 331
H+ +Y AM + V+ I+D E++ + F Q + S
Sbjct: 380 ETHTGKYPDIIAMLPRVFSTEAVESFIIDSEVVAVNKETGALQAFQVLQHRGRKNVSFES 439
Query: 332 SDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
+C FAFD+LY + + + L ER ++L P + +H
Sbjct: 440 VTIPVCVFAFDILYFNGSPQMTKPLLERRQVLYSYFTPIHAAFQ--FAEH---------- 487
Query: 392 EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAG 449
L +V+E++ F +I++ EG+++K L + + P RS WLKLK +Y+
Sbjct: 488 -----LDGTDVEEIQSFLDRSIKDGCEGLMVKTLKEEATYTPAKRSYCWLKLKKDYMDGV 542
Query: 450 SD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAV 508
+D LD++ IG YYG G+R G FL+A + + F S C++G+G DE+L+++
Sbjct: 543 TDTLDLVPIGAYYGKGKRTGVFGGFLLACYNSDSDE-----FQSICKIGSGFLDEQLESL 597
Query: 509 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVF- 567
L+ + P +Y+ ++E+PDVW+E+ + + I + +
Sbjct: 598 TQALQSCVLMEQ------PRYYR----AEEKPDVWLEASNVWEVKAADLSISPVHFAAYG 647
Query: 568 ----SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEY 613
S +LRFPR RVR DK ++ + + + + + +EY
Sbjct: 648 LVDPSKGIALRFPRFVRVREDKKANEATFATQIAAMYTAQSLSRKNYEEY 697
>gi|116754155|ref|YP_843273.1| DNA ligase I, ATP-dependent Dnl1 [Methanosaeta thermophila PT]
gi|121693344|sp|A0B7F9.1|DNLI_METTP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|116665606|gb|ABK14633.1| DNA ligase I, ATP-dependent Dnl1 [Methanosaeta thermophila PT]
Length = 552
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 141/570 (24%), Positives = 241/570 (42%), Gaps = 98/570 (17%)
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMI--- 120
G+ S+L + A G+S D+ + + G+ +VA ++RR+ +
Sbjct: 57 GVGPSLLYESISRATGLSSDAVNEL----------LRATGDPGLVAYRAVERRKPLTLAA 106
Query: 121 ---SGGLTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKDLKL 174
S GL ++++ +A + R ++ L + + + E K+I + ++D+++
Sbjct: 107 FSGSEGLEVQDVYQRFLSIAKASGRGSQEIRVKNLQYMFSEASPLEAKYIARLAMEDMRI 166
Query: 175 GISEKSI-------FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQ 227
G+ E + F D E +N+T DL LV E K R I + + ++
Sbjct: 167 GVGEGLVRDAIAKAFGVSKEDVERAYNLTNDLGLVAEYAK--LGRLNELGISINRPIKMM 224
Query: 228 LAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKI 287
LA +IG++ A L +E KFDG R+QIHK+ + FSR D + + +I
Sbjct: 225 LA-QIGESIEA--SLAEGATAVEWKFDGARVQIHKDKGNVRIFSRRLEDVTSSLPEIREI 281
Query: 288 IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQ-----LCYFAFD 342
+ +V ILDGE + R F QEI + R R L FD
Sbjct: 282 VRGHVRARTAILDGEAVATGED-GRPLPF---QEILRRFRRKYGVARTAKTIPLKLHLFD 337
Query: 343 VLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNV 402
++Y+ S++ + L+ER +L V P ++ + +V +V
Sbjct: 338 IIYMDGASLLDEPLEERRRVLVSVADPE------IIAEQ---------------VVTSDV 376
Query: 403 DEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYG 462
VE+ ++E + EG++LK+ S + PG R WLK+KP LD+++IG +G
Sbjct: 377 HRVEEIYREALAAGHEGVMLKNPSSTYTPGKRGKNWLKIKPLL----ESLDLVVIGARWG 432
Query: 463 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
G+R + + +A DT V TG++DE L +L FR+
Sbjct: 433 EGKRANLLGSYRLACI-----DTDTGELKDVGWVATGITDEML----AELTELFREL--- 480
Query: 523 KRAPPSFYQVTNNSKE---RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 579
V N E P++ E + I RS +S+ Y+LRFPR+
Sbjct: 481 --------IVKENGMEVEVHPEIVFEVGYEEIQ----------RSPNYSSGYALRFPRLI 522
Query: 580 RVRYDKPWHDCLDVQSFVELVHSSNGTTQK 609
VR DK + ++ E+ G ++K
Sbjct: 523 AVRDDKSPSEADTLERIGEIYRLQRGRSKK 552
>gi|156376850|ref|XP_001630571.1| predicted protein [Nematostella vectensis]
gi|156217595|gb|EDO38508.1| predicted protein [Nematostella vectensis]
Length = 609
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 179/399 (44%), Gaps = 59/399 (14%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDH- 277
G ++P LA ++ G E K+DG+R QIH +NG EIH +SR+ ++
Sbjct: 229 GVPLKPMLAHPSKGVAEVLKRFEGSAFTCEYKYDGERAQIHLLENG-EIHIYSRNQENNT 287
Query: 278 SEYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL 336
S+Y +S++ + + + I+D E + WD + F + D Q+
Sbjct: 288 SKYPDIISRMPKVMSEEIKSFIIDTEAVAWDREKQQILPFQILSTRKRKDADVSEIKVQV 347
Query: 337 CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
C +AFD+LY+ S + + R LL+ K ++G
Sbjct: 348 CVYAFDLLYLNGKSYVKEPFSVRRNLLRTSFKEAEGEFVF-----------------AKC 390
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIR-AGSDLD 453
+ + N +++ +F +E+I+ EG+++K D+ + +E RS WLKLK +Y+ G LD
Sbjct: 391 MTSTNTEDMAEFLEESIKGNCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLADVGDTLD 450
Query: 454 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEEL-------- 505
++ IGGY G G+R G FL+A D F + C++GTG +DE L
Sbjct: 451 LVPIGGYRGKGKRTGAYGGFLLACY-----DAESEEFQTICKIGTGFTDEVLESHHQFFK 505
Query: 506 DAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRT 561
D V+ K KPY+R + PD W ++ + ++ LS++ +
Sbjct: 506 DHVIDKPKPYYR----------------YDDGLEPDHWFDAVQVWEVRAADLSVSPVHKA 549
Query: 562 IRSEVFSAP-YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+V SLRFPR RVR DK + D E+
Sbjct: 550 AVGQVDPVKGISLRFPRFLRVRDDKKPEEATDSTQVAEM 588
>gi|196017042|ref|XP_002118368.1| hypothetical protein TRIADDRAFT_34086 [Trichoplax adhaerens]
gi|190579027|gb|EDV19135.1| hypothetical protein TRIADDRAFT_34086 [Trichoplax adhaerens]
Length = 707
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 177/378 (46%), Gaps = 45/378 (11%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHS 278
G ++P LA H ++L K E K+DG+R QIH NG E+ +SR+ +++
Sbjct: 327 GVPLKPMLAHPTKGIHEVLKRLEDKSFACEYKYDGERAQIHLLDNG-EVQIYSRNCENNT 385
Query: 279 -EYGHAMSKIIEQNV-LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL 336
+Y + ++ E + ++ I+D E + WD + F + D Q+
Sbjct: 386 TKYPDIIMRMPEVKLDHINSFIIDTEAVAWDKEKQQILPFQILSTRKRKDVDANEIKVQV 445
Query: 337 CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
C +AFD+LY S++ ++ ++R +L+ K +G S
Sbjct: 446 CVYAFDMLYCNGKSLVKETFEKRRSVLRSSFKEVEGEFVF-----------------AKS 488
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRA-GSDLD 453
++ + +E+ +F E+I+ EG+++K L + +E RS WLKLK +Y+ G LD
Sbjct: 489 RISADTEEIGEFLDESIKGNCEGLMVKTLQIEATYEIAKRSHSWLKLKKDYLEGVGDTLD 548
Query: 454 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 513
+++IGGY G G+R G FL+A + F S C++GTG D EL+ LK
Sbjct: 549 LVVIGGYLGKGKRTGTYGGFLLACY-----NDEDEEFQSICKIGTGFKDVELEQHTNFLK 603
Query: 514 PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFSA 569
+ P S+Y+ +S +PD W E+ + K LSI S + + +
Sbjct: 604 ------QQTIEKPKSYYRY--DSSVQPDHWFEAVQVWEVKVADLSI-SPVHKAAAGIVDP 654
Query: 570 P--YSLRFPRIDRVRYDK 585
SLRFPR R+R DK
Sbjct: 655 EKGISLRFPRFLRIRDDK 672
>gi|22595826|gb|AAN02858.1| DNA ligase-like protein [lumpy skin disease virus]
Length = 559
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 215/470 (45%), Gaps = 43/470 (9%)
Query: 124 LTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFH 183
L + +++ L+ L + +K L+ + A ++K I+ I DL++ K +
Sbjct: 111 LLLNDVDMFLNHLTTLTKEKDKQMFLTMISSICTADDLKCFILFIKNDLQIKAGIKCVLD 170
Query: 184 EFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLH 243
A + F + DLK + + + ++ + V+P LA ++ A++K +
Sbjct: 171 ALDKHAYNHFKNSIDLKKIVFGI--SLNKLNEDNMVLFTPVKPMLADVCKSSYYAFKK-Y 227
Query: 244 GKEVVIECKFDGDRIQIHKNGSEIHYFSRSF---LDHSEYGHAMSKIIEQNVLVDRCILD 300
+ E K+DG+RIQIHK+ + YFSR+ L H G + + ILD
Sbjct: 228 KDGICAEIKYDGERIQIHKDNNLYKYFSRNLKPVLFHKIEGFD-EFLTNAFPSANNFILD 286
Query: 301 GEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERH 360
E+++ D + N+F FGS K + S+ C F FD L+ + S+I
Sbjct: 287 AELILIDLNTNKFVPFGSLGINKKNSFKNSST----CLFVFDCLFYNNVSLISL------ 336
Query: 361 ELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGI 420
P R +T+V + +N ++ + + + D++ K + I+ + EG+
Sbjct: 337 --------PFVNRRKTIV--NNIN-EIKNKVMVSEAFYVYKEDDLNKIMDDVIKKKLEGL 385
Query: 421 VLKDLGSKWEPGDRSGKWLKLKPEYIRAGS---DLDVLIIGGYYGSGRRGGEVAQFLVAL 477
+LK + + PG R WLK+K +Y+ GS D++++G YYG G +GG + FL+
Sbjct: 386 ILKGINIDYVPGKRG--WLKMKKDYLDDGSMADSADLVVLGSYYGKGSKGGAPSIFLMGC 443
Query: 478 AERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSK 537
++ + + + ++ C +G D+ L V +++ F K + P + V +
Sbjct: 444 YDKESNN---WKTVTKC---SGHDDDTLKKVQKEIE--FLKISKDTKKIPKWLIV--DKI 493
Query: 538 ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPW 587
PD + P+KS + I+ T + S+RFPR ++RYDK W
Sbjct: 494 YYPDFVVCDPKKSQVWEISGASFTKSIHHTADGISIRFPRFKKIRYDKNW 543
>gi|218184789|gb|EEC67216.1| hypothetical protein OsI_34114 [Oryza sativa Indica Group]
gi|222613048|gb|EEE51180.1| hypothetical protein OsJ_31972 [Oryza sativa Japonica Group]
Length = 627
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 177/380 (46%), Gaps = 47/380 (12%)
Query: 220 VGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDH 277
+G V P LA K G E E K+DG+R QIH ++GS Y + +
Sbjct: 248 IGVPVGPMLAKATKSVSEIIDKFQGLEYTCEYKYDGERAQIHCLEDGSVEIYSRNAERNT 307
Query: 278 SEYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS-SDRQ 335
+Y + + + V +LD E++ +D + F Q ++ AR G++ SD +
Sbjct: 308 GKYPDVVDAVSRFRKPTVKSFVLDCEIVAYDREKKKILPF---QILSTRARKGVTISDIK 364
Query: 336 --LCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEP 393
+C F FD+LY+ ++ + LK R E L + G +
Sbjct: 365 VSVCTFGFDILYINGKPLLQEQLKVRREHLYNSFEEVPGVFQLAT--------------- 409
Query: 394 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GS 450
S+ +++++E++KF + + EG+++K L + +EP RS WLKLK +Y+ + G
Sbjct: 410 --SITSNDLEEIQKFLDTAVNSSCEGLIIKTLDKDATYEPAKRSNNWLKLKKDYMDSIGD 467
Query: 451 DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVT 510
LD++ I ++G G+R G FL+A D + + C +GTG S+++L+
Sbjct: 468 SLDLVPIAAFHGRGKRTGVYGSFLLACY-----DEQNEEYQTICNIGTGFSEQQLEERSV 522
Query: 511 KLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEV 566
L R PK P ++Y+ + PDVW E E K+ LSI+ R V
Sbjct: 523 SL----RTKAIPK--PKAYYRFADTMD--PDVWFEPSEVWEVKAADLSISPVHRAANGIV 574
Query: 567 -FSAPYSLRFPRIDRVRYDK 585
+ SLRFPR+ RVR DK
Sbjct: 575 DPNKGISLRFPRLLRVRDDK 594
>gi|392597419|gb|EIW86741.1| ATP-dependent DNA ligase [Coniophora puteana RWD-64-598 SS2]
Length = 834
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 180/404 (44%), Gaps = 70/404 (17%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHSE 279
G ++P LA + K E K+DG+R Q+HK + FSR+ D S+
Sbjct: 452 GVPLKPMLAKPTKAIGEVLDRFENKRFTCEYKYDGERAQVHKLEDGTVAVFSRNSEDMSK 511
Query: 280 YGHAMSKIIEQNVLVDRCI--------LDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS 331
++EQ + CI LD E + + + + F QE+++ R +
Sbjct: 512 ---KYPDLVEQ---LPHCIKPTTKTFVLDAEAVAIEKATGKLMPF---QELSRRKRKDVK 562
Query: 332 SDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVR 388
+ ++C FAFD+LY+ ++ +SL ER ELL++ + G + G
Sbjct: 563 IEDIQVRVCLFAFDLLYLNGEPLMQKSLGERRELLREHFQVVPGEFDFAKSSDG------ 616
Query: 389 PQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEY 445
DE++ F +E++++ EG+++K L S +EP RS WLKLK +Y
Sbjct: 617 -----------ETTDEIQTFLEESVKDGCEGLMVKMLETDASYYEPSRRSVNWLKLKKDY 665
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD++++GGYYG G+R FL+A D + + C++GTG S+E
Sbjct: 666 LAGVGDSLDLVVVGGYYGKGKRTNVYGAFLLACY-----DADAEEYQTICKIGTGFSEEA 720
Query: 505 LDAVVTKLKPY-FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIR 563
L L+P K +A +PD+W E K + +T+D+
Sbjct: 721 LQQHWDTLRPLEMEKLRGDLKA----------GGAKPDIWFEP--KIVWEVLTADLSL-- 766
Query: 564 SEVFSAP--------YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
S V++A SLRFPR RVR DK D + E+
Sbjct: 767 SPVYTAAQGLVEERGISLRFPRFLRVRDDKSADDATGPEQVAEM 810
>gi|341900680|gb|EGT56615.1| hypothetical protein CAEBREN_22520 [Caenorhabditis brenneri]
Length = 750
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 141/500 (28%), Positives = 228/500 (45%), Gaps = 61/500 (12%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY---CDS-VDYFSALRLILPSLDRERGSYGLKE 67
+V +FN I++T K++ F+K +++ C S + S LR + +R R + +
Sbjct: 11 IVGVFNKIKRTSNLKSKQANFQKSFESWKQQCSSPSEMTSILRFFVSDYERFR-KFDMGP 69
Query: 68 SVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIK 127
+ LA+ L A AD V I+ AA +A E M G + +
Sbjct: 70 TKLASFL--AKTFHDVRADYVATISKDPTQAARQLAE--KIAEEYRTENDEM--GVVKVG 123
Query: 128 ELNDLLDRLAS-SENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLK--LGISEKSIFHE 184
ELN+L D LA S + A K +S L+KK + E++W+ IIL++++ LG I
Sbjct: 124 ELNELFDFLAGGSMDDANKREKMSKLVKKCSEDELEWLFNIILRNVESALGAPSNKILDW 183
Query: 185 FHPDAEDLFNVTCDLKLVCE-KL--KDRNQRHKRQDIEVG----------KAVRPQL--A 229
P A ++ T DLK V KL KD+ + K D+E G K P L
Sbjct: 184 VSPSACAIWAQTHDLKAVLNGKLVGKDKEESEKAGDVEGGSEEVEDEHLFKIWTPMLLQK 243
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH---AMS 285
+ GD +A K G + ++ KFDG+ + +HK G+E +F+R+ D S EYG A+
Sbjct: 244 QKRGDWYANIEKFGGPKFFLQVKFDGENVLLHKKGNEYRWFTRNNNDFSKEYGDSSMAIG 303
Query: 286 KIIEQ-----NVLVDRCILDGEMLVWDTSLNRF-----AEFGSNQEIAKAARDGLSSDRQ 335
K+ + N + I + E+++WD R A S+ ++ ++Q
Sbjct: 304 KLSSRIHSFFNKDCESAIFNCELMLWDKKTKRLCRHNDASTTSDAQVLSFRHVKPDDNQQ 363
Query: 336 LCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW 395
L FD+LY+ L +R E+L K+ K R +T+ + H
Sbjct: 364 LTVVLFDLLYLNGKPFFGAPLHQRLEML-KIAPLKKQREDTIF----IAKHEE------- 411
Query: 396 SLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK--WLKLKPEYIRAGSDLD 453
A +E++KFF+ + N +EGIV+K S + G RS W KLKP + DLD
Sbjct: 412 ---ASKKEEIQKFFEVAMANNEEGIVVKRADSVYVKGQRSAANGWFKLKPSASK-DCDLD 467
Query: 454 VLIIGGYYGSGRRGGEVAQF 473
+ ++ + G+ R G + +F
Sbjct: 468 LALVAVHPGAARNGRTLYRF 487
>gi|16082164|ref|NP_394605.1| ATP-dependent DNA ligase [Thermoplasma acidophilum DSM 1728]
gi|14423677|sp|Q9HJ26.1|DNLI_THEAC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|10640459|emb|CAC12273.1| DNA ligase related protein [Thermoplasma acidophilum]
Length = 588
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 136/547 (24%), Positives = 238/547 (43%), Gaps = 82/547 (14%)
Query: 102 AGNFPMVAAEVLQRR--QGMISGGLTIKELNDLLDRLA---SSENRAEKISVLSTLIKKT 156
AG+ +A E+ ++R + ++ +T+K ++D L ++A S + ++ L +
Sbjct: 86 AGDIGTIAKEIAEKRSLRSLVQEEMTVKYIHDTLMKMARTTGSGSTKARVDAYMDLFLNS 145
Query: 157 NAQEMKWIIMIILKDLKLGISEKSIF---------HEFHPDAEDLFNVTCDLKLVCEKLK 207
+E+ +I II L++GIS+ +I ++ D E+ FN DL + +L+
Sbjct: 146 TPKEIMYITRIITGKLRIGISDATILDAIVKAFADEKYSEDIENAFNFHPDLGYIASELR 205
Query: 208 DRNQRHKRQDIEVGKA----VRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKN 263
N +++G + LA R+ K+ G+ E K+DG R + H
Sbjct: 206 KGNIDAI---LKLGPTPMIPFKVMLAERLRSVEEILEKMGGR-CAFEYKYDGMRTETHIE 261
Query: 264 GSEIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFG--SNQE 321
++ FSR + + ++K + VD ILDGE + +D F S++
Sbjct: 262 RGKVRLFSRGNEETTNQFPDITKAASETFKVDSAILDGEAVPYDPDTGELYPFQVISHRR 321
Query: 322 IAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKG-RLETLVPD 380
K D +SS+ + F FD++Y+ + ER ++L+ + S RL +
Sbjct: 322 GRKYDLDKVSSEIPITVFLFDIVYLNGRDLSKTPYTERRKILESIFTESDSFRLAKRI-- 379
Query: 381 HGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKW 438
G+P EV +FF IE+ EG+V K S ++ G R W
Sbjct: 380 --------ESGDPA---------EVHRFFNSAIEDGCEGLVAKSTSPDSFYKAGARGWLW 422
Query: 439 LKLKPEY-IRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRR---FISFC 494
+KLK +Y + LD+ ++G +YG GRR G L+A TY + F + C
Sbjct: 423 IKLKRDYQAQLWDTLDLTVVGAFYGHGRRKGTYGALLLA--------TYNDKNDTFETVC 474
Query: 495 RVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILS 554
++G+G SD+ L ++ K + Y K E P R V +N + PDVW ++++
Sbjct: 475 KLGSGFSDDVLFSLPKKFEQYVSK-EKPAR-------VISNLE--PDVWFYP---AVVME 521
Query: 555 ITSDIRTIRSEVFSAPY---------SLRFPRID-RVRYDKPWHDCLDVQSFVELVHSSN 604
+ T+ S + + Y S+RFPR + R DK D + +E+
Sbjct: 522 VIGAEITV-SPIHTCAYGEIEKDSGLSVRFPRFTGKWREDKKPEDSTTSREILEMYKEQK 580
Query: 605 GTTQKGK 611
T + K
Sbjct: 581 KTITEEK 587
>gi|296109481|ref|YP_003616430.1| DNA ligase I, ATP-dependent Dnl1 [methanocaldococcus infernus ME]
gi|295434295|gb|ADG13466.1| DNA ligase I, ATP-dependent Dnl1 [Methanocaldococcus infernus ME]
Length = 565
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 151/605 (24%), Positives = 271/605 (44%), Gaps = 86/605 (14%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVDY----FSALRLILPSLDRERGSYGLKE 67
+ +FN I+ T KR+ F K L+ D D + A+ + P D ER G+ E
Sbjct: 6 VCEIFNKIENTTKRLDKRAYFIKLLEKVKDPEDLKRICYIAIGRVFPEYD-ER-ELGVGE 63
Query: 68 SVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQ---RRQGMISGGL 124
+L N +I + G++KD + K + G +AAE + + + ++ L
Sbjct: 64 KLLINAIISS-GINKDKL-------YEKIKETGDIG----LAAEKAKEEGKVKTLLFSPL 111
Query: 125 TIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSI 181
T+KE+ + L ++A +E ++ +K+ ++S+L + + E +++ +IL D+++G++ ++
Sbjct: 112 TVKEVFETLRKVAETEGEGSQKKKMRLISSLFLRASPIERRYLARLILGDMRIGMNIPTV 171
Query: 182 -------FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGD 234
F+ E ++ VT D+ L+ EKL K +I++ + ++P LA
Sbjct: 172 LEALSIYFNVPKEKLEKIYAVTNDIGLLAEKLMKNELDDKELNIKLFRPIKPMLAQLAPS 231
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKII-EQNVL 293
A ++ + E K+DG RIQIHK G ++ +SR D + HA+ +I+ E
Sbjct: 232 IEEAIIEMGHPQ--FETKYDGARIQIHKKGDKVKIYSRKLEDVT---HALPEIVNEIKKF 286
Query: 294 VDRCILDGEMLVWDTSLNR-----FAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGD 348
I++GE + + R F +I KA + L + FD+LY
Sbjct: 287 KHDLIVEGECVAIEEGRPRPFQDILRRFRRKHDIGKAMKKI-----NLRAYLFDLLYKDG 341
Query: 349 TSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKF 408
S I + KER + L+++V + + + + LV ++ E ++F
Sbjct: 342 ESYIDKPFKERRKALEELV-GYENDWRKERERIERELKEDKKIDISYKLVTNDPREAKEF 400
Query: 409 FKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRRGG 468
+K ++ EG+++K+L + + PG R K KP +LDV+I G G+R
Sbjct: 401 YKWSLSIGHEGVMIKNLNAPYTPGSRVRTMYKFKPTL----ENLDVVITKAKRGMGKRKD 456
Query: 469 EVAQFLVALAERPA---PDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRA 525
F + + ++ P Y VGTGL++E+L LK K
Sbjct: 457 WYGSFEICVKDKDGNLQPIGY---------VGTGLTEEDLQM----LKEMIDKI------ 497
Query: 526 PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
K+ D I PE I++ + + +S+ + Y+LRFPRI R R+DK
Sbjct: 498 ---------VVKDLGDEVIVKPE--IVVEVAYE-EIQKSDKYPCGYALRFPRIVRFRFDK 545
Query: 586 PWHDC 590
D
Sbjct: 546 SIEDI 550
>gi|213401441|ref|XP_002171493.1| DNA ligase [Schizosaccharomyces japonicus yFS275]
gi|211999540|gb|EEB05200.1| DNA ligase [Schizosaccharomyces japonicus yFS275]
Length = 730
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 137/550 (24%), Positives = 231/550 (42%), Gaps = 86/550 (15%)
Query: 103 GNFPMVAAEVLQRRQGMISGG-LTIKELNDLLDRLAS---SENRAEKISVLSTLIKKTNA 158
G+ ++A Q + M LTI L L +AS S+++A KI ++ L+
Sbjct: 201 GDLGLIAQSSRQNQPTMFKPAPLTIPVLFKTLKNIASMTGSQSQARKIGLIRRLLSSCQN 260
Query: 159 QEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLV----C----EKLKDRN 210
+E K+++ ++ L+L ++EK+I A +++ D V C +KL+D
Sbjct: 261 EEPKYLVRMLEGKLRLNLAEKTIIVSL-AHAAAMYHAEKDSTKVNPEICAEAEQKLRDVY 319
Query: 211 QRHKRQDIEV-------------------GKAVRPQLAMRIGDAHAAWRKLHGKEVVIEC 251
+ D + G ++P LA + + E
Sbjct: 320 SQLPSYDFIIPHLLEHGLEGLEDSCKLTPGVPMKPMLAKPSKQISEVLDRFERSKFTCEY 379
Query: 252 KFDGDRIQIH-KNGSEIHYFSRSFLDHS-EYGHAMSKIIE-QNVLVDRCILDGEMLVWDT 308
K+DG+R QIH ++ FSR+ D S Y + + + ILD E + WD
Sbjct: 380 KYDGERAQIHFTEDGKLRVFSRNSEDVSGRYPDIVESVSRWRKPTSTSFILDCEAVGWDR 439
Query: 309 SLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQK 365
++ F Q ++ R + + + C FAFD+LY+ S++ ER LL
Sbjct: 440 DEHKILPF---QILSTRKRKDVQLEDVKVRACIFAFDLLYLNGKSLLTTPFIERRRLLYD 496
Query: 366 VVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL 425
P++G S A + +++EKF + +I + EG+++K L
Sbjct: 497 AFSPAEGEFTF-----------------AKSSDAQSSEDIEKFLENSIHDSCEGLMVKML 539
Query: 426 G---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERP 481
S +EP RS WLKLK +Y+ G D+++IG Y+G G+R +L+ +
Sbjct: 540 DGPESHYEPSKRSRNWLKLKKDYLSGVGDSFDLIVIGAYHGRGKRTSVYGAYLLGCYD-- 597
Query: 482 APDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPD 541
PDT + C++GTG S+E L+ + K + P + ++ +PD
Sbjct: 598 -PDT--EMIQTICKLGTGFSEELLEKFYNQFK------DTVTLKPKEYISHSDVPAHQPD 648
Query: 542 VWIESPEKSIILSITSDIRTIRSEVFSAP---------YSLRFPRIDRVRYDKPWHDCLD 592
VW E K + + +D+ S V+ A SLRFPR R R DK W +
Sbjct: 649 VWFEP--KYLWEILAADLSL--SPVYKAAIGYISEDKGVSLRFPRFVREREDKNWEEATS 704
Query: 593 VQSFVELVHS 602
+ E+ S
Sbjct: 705 AEQIAEMYRS 714
>gi|448305598|ref|ZP_21495528.1| ATP-dependent DNA ligase I [Natronorubrum sulfidifaciens JCM 14089]
gi|445588368|gb|ELY42612.1| ATP-dependent DNA ligase I [Natronorubrum sulfidifaciens JCM 14089]
Length = 563
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 135/504 (26%), Positives = 223/504 (44%), Gaps = 94/504 (18%)
Query: 118 GMISGGLTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKDLKL 174
G S LT++E + L LA++E K+ +L L + + E +++ ++L ++++
Sbjct: 112 GGASETLTVREGFETLSELAAAEGAGSHDTKVDLLFGLFNRCESVEARYLARLVLSEMRI 171
Query: 175 GISEKSI-------FHEFHPDAEDLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVRP 226
G+ E ++ F E V+ D V +D + D+EVG+ V+
Sbjct: 172 GVGEGAVRDAISEAFDVPGERVERALQVSNDYGQVARVARDDGLEGLDAMDLEVGRPVQA 231
Query: 227 QLAM--RIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-----KNGSEIHYFSRSFLDHSE 279
LA + DA W E +E K+DG R+Q+H + +E FSR+ D ++
Sbjct: 232 MLAQAGTVTDALEEW-----DEAAVEWKYDGARVQLHHDPNGTDAAETRVFSRNMEDVTD 286
Query: 280 YGHAMSKIIE--QNVLVDRCILDGEMLVWDTS---------LNRFAEFGSNQEIAKAARD 328
A+ +++E + L + ILDGE++ D L RF ++AKA
Sbjct: 287 ---ALPEVVEFAEETLAEPAILDGEVVAVDDDGAPLPFQEVLKRFR---RKHDVAKA--- 337
Query: 329 GLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVR 388
D ++ FD L+ G ++ +SL RHE RLE L+ D + +
Sbjct: 338 --REDVEVRPVFFDCLHAGGDDLLAESLTTRHE-----------RLEALLAD---DPNQE 381
Query: 389 PQGEPCWSLVAHNVD--EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI 446
P SL H D +E + +E EGI+LKD S + PG R W K KP+
Sbjct: 382 PAAVDGLSLCWHTDDPETIELIDNDALEAGHEGIMLKDPDSTYSPGRRGKHWRKRKPDV- 440
Query: 447 RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 506
LD ++ G +G GRR + F +A+ A D + +V TG++DE L+
Sbjct: 441 ---ETLDCIVTGAEWGEGRRATFLGTFELAVR---AGD----ELETVGKVATGITDETLE 490
Query: 507 AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEV 566
+ L+P+ +T + + DV +PE ++ +I+T S
Sbjct: 491 ELTDLLEPH----------------ITAENGQEVDV---APE-TVFEVGYEEIQT--SPT 528
Query: 567 FSAPYSLRFPRIDRVRYDKPWHDC 590
+S+ Y+LRFPR VR+DK D
Sbjct: 529 YSSGYALRFPRFQGVRHDKDPSDA 552
>gi|392343903|ref|XP_003748816.1| PREDICTED: DNA ligase 1-like, partial [Rattus norvegicus]
Length = 831
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 179/386 (46%), Gaps = 61/386 (15%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHS- 278
G ++P LA ++ + E K+DG R QIH G E+ FSR+ D+S
Sbjct: 450 GVPLKPMLAHPTRGVREVLKRFEEVDFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNSG 509
Query: 279 EYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLC 337
+Y +S+I + ++ V ILD E + WD + F + D Q+C
Sbjct: 510 KYPDIISRIPKIKHPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVC 569
Query: 338 YFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW-- 395
+AFD++Y+ S+ Q L R +LL++ + V +GE +
Sbjct: 570 LYAFDLIYLNGESLARQPLSRRRQLLRE-------------------NFVETEGEFVFAT 610
Query: 396 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 452
SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 611 SLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLEGVGDTL 670
Query: 453 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD----AV 508
D+++IG Y G G+R G FL+A A D + C++GTG SDEEL+ ++
Sbjct: 671 DLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEELEEHHQSM 725
Query: 509 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS 568
L P R Y V + PD W++ S++ + ++ S ++
Sbjct: 726 QALLLPTPRPY------------VRIDGAVAPDHWLDP---SVVWEVKCADLSL-SPIYP 769
Query: 569 AP---------YSLRFPRIDRVRYDK 585
A SLRFPR RVR DK
Sbjct: 770 AARGLVDKEKGISLRFPRFIRVREDK 795
>gi|66730439|ref|NP_001019439.1| DNA ligase 1 [Rattus norvegicus]
gi|62471446|gb|AAH93604.1| Ligase I, DNA, ATP-dependent [Rattus norvegicus]
Length = 913
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 179/386 (46%), Gaps = 61/386 (15%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHS- 278
G ++P LA ++ + E K+DG R QIH G E+ FSR+ D+S
Sbjct: 532 GVPLKPMLAHPTRGVREVLKRFEEVDFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNSG 591
Query: 279 EYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLC 337
+Y +S+I + ++ V ILD E + WD + F + D Q+C
Sbjct: 592 KYPDIISRIPKIKHPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVC 651
Query: 338 YFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW-- 395
+AFD++Y+ S+ Q L R +LL++ + V +GE +
Sbjct: 652 LYAFDLIYLNGESLARQPLSRRRQLLRE-------------------NFVETEGEFVFAT 692
Query: 396 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 452
SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 693 SLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLEGVGDTL 752
Query: 453 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD----AV 508
D+++IG Y G G+R G FL+A A D + C++GTG SDEEL+ ++
Sbjct: 753 DLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEELEEHHQSM 807
Query: 509 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS 568
L P R Y V + PD W++ S++ + ++ S ++
Sbjct: 808 QALLLPTPRPY------------VRIDGAVAPDHWLDP---SVVWEVKCADLSL-SPIYP 851
Query: 569 AP---------YSLRFPRIDRVRYDK 585
A SLRFPR RVR DK
Sbjct: 852 AARGLVDKEKGISLRFPRFIRVREDK 877
>gi|357140737|ref|XP_003571920.1| PREDICTED: DNA ligase 1-like [Brachypodium distachyon]
Length = 918
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 180/401 (44%), Gaps = 64/401 (15%)
Query: 217 DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSF 274
+ +G V P LA K G E E K+DG+R QIH ++GS Y +
Sbjct: 535 NFSIGVPVGPMLAKATKSVSEIIDKFQGLEYTCEYKYDGERAQIHCMEDGSVEIYSRNAE 594
Query: 275 LDHSEYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD 333
+ +Y + + + V +LD E++ +D + F Q ++ AR G++ +
Sbjct: 595 RNTGKYPDVVDAVSRFRKPAVKSFVLDCEIVAYDREKKKILPF---QILSTRARKGVTIN 651
Query: 334 R---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQ 390
+C F FD+LY+ ++ + LK R E L + G +
Sbjct: 652 DIKVSVCTFGFDILYINGKPLLQEQLKVRREHLYNSFEEVPGIFQL-------------- 697
Query: 391 GEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA 448
++ +++++E++KF + + EG+++K L + +EP RS WLKLK +Y+ +
Sbjct: 698 ---ATAITSNDLEEIQKFLDVAVNSSCEGLIIKTLDKDATYEPAKRSNNWLKLKKDYMDS 754
Query: 449 -GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD- 506
G LD++ I ++G G+R G FL+A D + + C +GTG S+++L+
Sbjct: 755 VGDSLDLVPIAAFHGRGKRTGVYGSFLLACY-----DEQNEEYQTICNIGTGFSEQQLEE 809
Query: 507 -------AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSI 555
V++K K Y+R F T+ PDVW E E K+ LSI
Sbjct: 810 RSTSLRSKVISKPKAYYR-----------FADTTD-----PDVWFEPSEVWEVKAADLSI 853
Query: 556 TSDIRTIRSEV-FSAPYSLRFPRIDRVRYDK-PWHDCLDVQ 594
+ R V + SLRFPR+ RVR DK P H Q
Sbjct: 854 SPVHRAANGIVDPNKGISLRFPRLLRVRDDKNPEHATTSEQ 894
>gi|133892266|ref|NP_034845.2| DNA ligase 1 [Mus musculus]
gi|133892807|ref|NP_001076657.1| DNA ligase 1 [Mus musculus]
gi|313151236|ref|NP_001186239.1| DNA ligase 1 [Mus musculus]
gi|74150551|dbj|BAE32302.1| unnamed protein product [Mus musculus]
gi|187952925|gb|AAI38542.1| Lig1 protein [Mus musculus]
gi|223459942|gb|AAI38543.1| Lig1 protein [Mus musculus]
Length = 932
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 150/604 (24%), Positives = 249/604 (41%), Gaps = 112/604 (18%)
Query: 43 VDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNA 102
V Y S RL P E G+ + VL + A G +S +R KG A
Sbjct: 344 VLYLSLNRLGPPQQGLE---LGVGDGVLLKAVAQATGRQLES---IRAEVAEKGDVGLVA 397
Query: 103 GNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMK 162
N +L ISG T + D+ RL S + A+K+ ++ L E +
Sbjct: 398 ENSRSTQRLMLPPPPLTISGVFT--KFCDIA-RLTGSASMAKKMDIIKGLFVACRHSEAR 454
Query: 163 WIIMIILKDLKLGISEKSIFH------EFHPDAEDLFNVTCD------------------ 198
+I + L+LG++E+S+ P ++ D
Sbjct: 455 YIARSLSGRLRLGLAEQSVLAALAQAVSLTPPGQEFPTAVVDAGKGKTAEARKMWLEEQG 514
Query: 199 ----------------LKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
+ ++ E +R H + + G ++P LA ++
Sbjct: 515 MILKQTFCEVPDLDRIIPVLLEHGLERLPEHCK--LSPGVPLKPMLAHPTRGVSEVLKRF 572
Query: 243 HGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHS-EYGHAMSKIIE-QNVLVDRCIL 299
+ E K+DG R QIH G E+ FSR+ D++ +Y +S+I + ++ V IL
Sbjct: 573 EEVDFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKHPSVTSFIL 632
Query: 300 DGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKER 359
D E + WD + F + D Q+C +AFD++Y+ S++ Q L R
Sbjct: 633 DTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVRQPLSRR 692
Query: 360 HELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW--SLVAHNVDEVEKFFKETIENRD 417
+LL++ + V +GE + SL + +++ +F ++++++
Sbjct: 693 RQLLRE-------------------NFVETEGEFVFTTSLDTKDTEQIAEFLEQSVKDSC 733
Query: 418 EGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFL 474
EG+++K D+ + +E RS WLKLK +Y+ G LD+++IG Y G G+R G FL
Sbjct: 734 EGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFL 793
Query: 475 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK----PYFRKYEYPKRAPPSFY 530
+A A D + C++GTG SDEEL+ L+ P R Y
Sbjct: 794 LA-----AYDEESEELQAICKLGTGFSDEELEEHHQSLQALVLPTPRPY----------- 837
Query: 531 QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---------YSLRFPRIDRV 581
V + PD W++ SI+ + ++ S ++ A SLRFPR RV
Sbjct: 838 -VRIDGAVAPDHWLDP---SIVWEVKCADLSL-SPIYPAARGLVDKEKGISLRFPRFIRV 892
Query: 582 RYDK 585
R DK
Sbjct: 893 RKDK 896
>gi|149028347|gb|EDL83753.1| ligase I, DNA, ATP-dependent, isoform CRA_a [Rattus norvegicus]
gi|149028348|gb|EDL83754.1| ligase I, DNA, ATP-dependent, isoform CRA_a [Rattus norvegicus]
Length = 928
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 179/386 (46%), Gaps = 61/386 (15%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHS- 278
G ++P LA ++ + E K+DG R QIH G E+ FSR+ D+S
Sbjct: 547 GVPLKPMLAHPTRGVREVLKRFEEVDFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNSG 606
Query: 279 EYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLC 337
+Y +S+I + ++ V ILD E + WD + F + D Q+C
Sbjct: 607 KYPDIISRIPKIKHPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVC 666
Query: 338 YFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW-- 395
+AFD++Y+ S+ Q L R +LL++ + V +GE +
Sbjct: 667 LYAFDLIYLNGESLARQPLSRRRQLLRE-------------------NFVETEGEFVFAT 707
Query: 396 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 452
SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 708 SLDTKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLEGVGDTL 767
Query: 453 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD----AV 508
D+++IG Y G G+R G FL+A A D + C++GTG SDEEL+ ++
Sbjct: 768 DLVVIGAYLGRGKRAGRYGGFLLA-----AYDEESEELQAICKLGTGFSDEELEEHHQSM 822
Query: 509 VTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS 568
L P R Y V + PD W++ S++ + ++ S ++
Sbjct: 823 QALLLPTPRPY------------VRIDGAVAPDHWLDP---SVVWEVKCADLSL-SPIYP 866
Query: 569 AP---------YSLRFPRIDRVRYDK 585
A SLRFPR RVR DK
Sbjct: 867 AARGLVDKEKGISLRFPRFIRVREDK 892
>gi|408397149|gb|EKJ76299.1| hypothetical protein FPSE_03554 [Fusarium pseudograminearum CS3096]
Length = 886
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 132/515 (25%), Positives = 219/515 (42%), Gaps = 90/515 (17%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH-----PDAEDLFNVTCDLK 200
K E K+II + L+LG++E+++ HE + P A DL LK
Sbjct: 389 KGGPSEAKFIIRFLEGKLRLGLAERTVLVSLAQAIVAHEAYTKDKAPSATDLEKGEAILK 448
Query: 201 LVCEKLKD---------RNQRHKRQD---IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVV 248
V +L + K +D + G ++P LA + G++
Sbjct: 449 TVYSELPSYDVIIPAILEHGIMKLRDTCKLRPGVPLKPMLAKPTKAITEVLDRFEGQKFT 508
Query: 249 IECKFDGDRIQIH---KNGSE-----------------IHYFSRSFLDHS-EYGHAMSKI 287
E K+DG+R QIH K+ + FSR+ D S +Y ++K+
Sbjct: 509 CEYKYDGERAQIHYVAKDAPQELNEASQGAAKEVAAGVASIFSRNSEDLSRKYPDILAKL 568
Query: 288 IEQNVLVDRC-ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYV 346
L + +LD E + WD + F K ++C FAFD+LY+
Sbjct: 569 HTWVKLDTKSFVLDCETVAWDVDEKKVLPFQQLMTRKKKDVKVEDVKVKVCVFAFDLLYL 628
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
+V+ ++L+ER ELLQ P +G +H+ Q +DE++
Sbjct: 629 NGEAVVEKALRERRELLQTAFNPVEGEF-------AFATHMDGQ----------ELDEIQ 671
Query: 407 KFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYG 462
F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G YYG
Sbjct: 672 VFLDESVKASCEGLMVKMLDGDESGYEPSKRSRNWLKIKKDYLSGVGDSLDLVVLGAYYG 731
Query: 463 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
G+R FL+A P++ ++ + C +GTG S++ L+ + +L E
Sbjct: 732 KGKRTSVYGAFLLACYN---PNS--EKYETVCNIGTGFSEQVLEDLHKQLS------EIT 780
Query: 523 KRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSAP----YSL 573
P FY ++ + +PD+W E P+ K+ L+++ + E SL
Sbjct: 781 IDRPKPFYSHSSGGQHQPDIWFE-PKYVWEVKTADLTLSPRYKAGAQEGVDPSGNKGISL 839
Query: 574 RFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 608
RFPR RVR DK + E+ T+
Sbjct: 840 RFPRFIRVRDDKKADAATTSRQVAEMYRKQESVTK 874
>gi|154417137|ref|XP_001581589.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915818|gb|EAY20603.1| hypothetical protein TVAG_162990 [Trichomonas vaginalis G3]
Length = 679
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 134/516 (25%), Positives = 218/516 (42%), Gaps = 93/516 (18%)
Query: 138 SSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEF------------ 185
S NR + I L T K +E+K I+ ++ L++G + +S
Sbjct: 200 SDRNRTQTIQKLLTNCK---PEEVKCIVRMLECKLRVGAAHESFLFALGMAFRRREYIMG 256
Query: 186 ----HPDAEDL-----------FNVTCDLKLVCEKLKDRNQ-RHKRQDIEVGKAVRPQLA 229
+PD EDL + +++ E L+ + K +I+VG P LA
Sbjct: 257 MIKNNPDEEDLKDHGHLFREIYYRYPIIDEILVEFLRGSFKGAEKNINIKVGIPAMPMLA 316
Query: 230 MRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNG-SEIHYFSRSFLDHSEYGHAMSKII 288
R+L + E K+DG+R QIHKN ++ FSRS D + ++ II
Sbjct: 317 KPAKKLDEIKRRLGDGRITGEYKYDGERAQIHKNKEGKVRIFSRSAEDSTAKFADVADII 376
Query: 289 EQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGD 348
NV ++ ILD E++ +D + F + K D S+ +C AFD+L
Sbjct: 377 TDNVKGEQYILDSEIVAYDPEKHVILPFQTLMNRPKKGTDTPSA-IHVCVCAFDLLSYNG 435
Query: 349 TSVIHQSLKERHELLQKVVK--PSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
S++ + L++R + L ++V P+K +L T A ++++
Sbjct: 436 VSMLDEPLEKRRDKLHEIVTVVPTKLQLATYKN-------------------ASKIEDLG 476
Query: 407 KFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI-----RAG-------SDLDV 454
FF+E + NR EG+++K L ++E G R+ W KLK +YI + G +DV
Sbjct: 477 DFFEEAVSNRTEGLMVKTLNGRYECGKRAMSWAKLKKDYISKEVFKGGVAEEIPPDTIDV 536
Query: 455 LIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKP 514
++IG YG G+R FLV + + + S C VGTG +++L
Sbjct: 537 VVIGATYGKGKRTSVYGAFLVGVY-----NNVTGKVESLCFVGTGFKEDDL--------- 582
Query: 515 YFRKYEYPKRAPPSFYQVTNNSKERP---DVWIESPEKSIILSITSDIRTIRS------E 565
K Y K P + +N RP D PE + + +DI+T + E
Sbjct: 583 ---KEFYEKLHPLEMEKCPDNVDCRPLDQDPVFFKPELVWEIQV-ADIQTTPTYSACWGE 638
Query: 566 VFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVH 601
+ ++RF R R R DK W + +EL H
Sbjct: 639 LGEKGLTIRFGRYYRTRTDKTWEQSTSTEQLLELYH 674
>gi|66359502|ref|XP_626929.1| DNA LIGASE I [Cryptosporidium parvum Iowa II]
gi|46228073|gb|EAK88972.1| DNA LIGASE I [Cryptosporidium parvum Iowa II]
Length = 825
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 193/428 (45%), Gaps = 58/428 (13%)
Query: 218 IEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-----KNGSEIHYFSR 272
+ G P LA + E K+DG+R QIH N I F+R
Sbjct: 426 LTTGIPCEPMLARPTKGIQDVLNRFENFLFTAEYKYDGERAQIHVYKDKSNKRVIKIFTR 485
Query: 273 SFLDHSEYGHAMSKIIEQ--NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGL 330
+ ++ + + + Q N V+ CILD E++ + S ++ F Q ++ R +
Sbjct: 486 NLESATDRYPDLIQYLNQSLNSSVEDCILDSEVVAYSKSEDKILPF---QVLSTRKRKNV 542
Query: 331 SSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHV 387
+ D Q+C FD + S++ +SL ER + L+K + + G + ++
Sbjct: 543 AFDDIQIQICLMLFDCMGFNGESLLKKSLFERRQYLRKCI------------NEGQSEYI 590
Query: 388 RPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEY 445
+ S + +D ++ F E+IEN EG+++K L + +EP RS WLK+K +Y
Sbjct: 591 KFT----TSTETNKLDHLDSFLSESIENNCEGLMVKTLHDNASYEPSKRSLNWLKIKKDY 646
Query: 446 IRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ +D +DV+ I YG G+R G FL+A+ +T + + C+ GTG SDE
Sbjct: 647 VDGLTDSIDVVPIAACYGKGKRNGVFGTFLLAVY-----NTEEEVYETVCKAGTGFSDEI 701
Query: 505 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNN---SKERPDVWIESPE-----KSIILSI- 555
L ++ T LK + + AP S+Y+ ++ S + DVW E P+ K LS+
Sbjct: 702 LQSLYTSLKDHI----IAEGAPKSYYKFDSSGQLSSLKQDVWFE-PKFVWEVKGADLSLS 756
Query: 556 ---TSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKE 612
T+ I TI + LRFPR R+R DK +E+ ++S T K
Sbjct: 757 PVHTAAIGTIDE---NRGIGLRFPRFIRIRDDKSPEQATSSIQIMEM-YNSQLITNNTKN 812
Query: 613 YGGLQDDK 620
DD+
Sbjct: 813 ETNFSDDQ 820
>gi|15668343|ref|NP_247139.1| DNA ligase [Methanocaldococcus jannaschii DSM 2661]
gi|2494166|sp|Q57635.1|DNLI_METJA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|1590924|gb|AAB98156.1| DNA ligase (lig) [Methanocaldococcus jannaschii DSM 2661]
Length = 573
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 145/608 (23%), Positives = 278/608 (45%), Gaps = 96/608 (15%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTYCDSVD-------YFSALRLILPSLDRERGSYG 64
+ +FN I+KT +KR F K +D + + A+ + P D ER G
Sbjct: 6 VCEIFNKIEKTTKRLEKRDYFIKLIDMVKEKGKPEDLKKICYMAIGRVYPEYD-ER-ELG 63
Query: 65 LKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQ---RRQGMIS 121
+ E +L N + ++G+ KD K + G +A E L+ ++ +
Sbjct: 64 IGEKLLINA-VTSIGIKKDEL-------LEKIKETGDIG----LAIEQLKSKIKQASLFF 111
Query: 122 GGLTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISE 178
LT+ E+ + L R+ E ++ +K+ ++S+L + + E +++ +IL+D+++G++
Sbjct: 112 QPLTVDEVYETLKRVGEIEGEGSQKKKLRLISSLFLRASPIECRYLARLILEDMRIGMNV 171
Query: 179 KSI-------FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMR 231
+I F+ E ++ +T D+ L+ EKL + + +++ + ++P LA
Sbjct: 172 PTILDALSVYFNVPKEKLEKIYAITNDIGLLAEKLLMGDLESEELKLKLFRPIKPMLAQL 231
Query: 232 IGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE-- 289
A L E K+DG R+QIHK+G+++ +SR D + +A+ +I+E
Sbjct: 232 TPSIEEAL--LEMGRAQFETKYDGARVQIHKDGNKVKIYSRRLEDVT---NALPEIVEAV 286
Query: 290 QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR-----DGLSSDRQLCYFAFDVL 344
+N+ VD+ I++GE + D + F Q+I + R + + L + FD+L
Sbjct: 287 KNINVDKLIVEGECVAIDKQTGKPRPF---QDILRRFRRKYDIGKMMKEINLRVYLFDIL 343
Query: 345 YVGDTSVIHQSLKERHELLQKVV------KPSKGRLET-LVPDHGLNSHVRPQGEPCWSL 397
Y S I + ++R ++L+++V + + R+E L D ++ + L
Sbjct: 344 YKDGVSFIDEEFEKRRKVLEEIVGYENDWRTERKRIEKELKSDKIIDI--------SYKL 395
Query: 398 VAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLII 457
V ++ E +F+ ++ EG+++K+L + + PG R K KP LDV+I
Sbjct: 396 VTNDAKEAREFYNWSLSIGHEGVMIKNLKAPYTPGSRVRTMYKFKPTL----ESLDVVIT 451
Query: 458 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 517
G G+R F + + + + YP VGTGL++ +L+ F
Sbjct: 452 KAKRGMGKRKDWYGSFEICVRDEEG-NLYP-----IGHVGTGLTEADLE---------FL 496
Query: 518 KYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPR 577
K E K + + E +V E I++ + + +S+ + Y+LRFPR
Sbjct: 497 KEEIDK-------IIIRDLGEEVEV-----EPKIVIEVAYE-EIQKSDKYPCGYALRFPR 543
Query: 578 IDRVRYDK 585
+ R R+DK
Sbjct: 544 VVRFRFDK 551
>gi|389639142|ref|XP_003717204.1| DNA ligase 1 [Magnaporthe oryzae 70-15]
gi|351643023|gb|EHA50885.1| DNA ligase 1 [Magnaporthe oryzae 70-15]
gi|440475490|gb|ELQ44160.1| DNA ligase 1 [Magnaporthe oryzae Y34]
gi|440485387|gb|ELQ65353.1| DNA ligase 1 [Magnaporthe oryzae P131]
Length = 896
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 135/533 (25%), Positives = 228/533 (42%), Gaps = 97/533 (18%)
Query: 131 DLLDRLASSE--NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF------ 182
D++ +L S+ N A K+ + K E K+I+ + L+LG++E+++
Sbjct: 376 DIIKKLLSAADVNNAGKVDISK---DKGGPSEAKFIVRFLEGKLRLGLAERTVLPSLAQA 432
Query: 183 ---HEFH-----PDAEDLFNVTCDLKLVCEKLKDRN------QRHKRQDIE------VGK 222
HE P D+ LK V +L H +++ G
Sbjct: 433 VIAHESSKKGTIPSTSDVEKAEQMLKTVYSELPSYEVIIPALLEHGIMNLKDNCKLRPGI 492
Query: 223 AVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIH-------------- 268
++P LA + + E K+DG+R QIH E +
Sbjct: 493 PLKPMLAKPTKAITEVLDRFENQTFTCEYKYDGERAQIHYVAKEANEELSTALPGATKAV 552
Query: 269 ------YFSRSFLDHSE-YGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQ 320
FSR+ D S+ Y ++K+ +LD E + WD + F Q
Sbjct: 553 GSGLAAIFSRNSEDLSQKYPDILAKLDSWVKPETKSFVLDCETVAWDVQEKKVLPF--QQ 610
Query: 321 EIAKAARDGLSSDRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLV 378
+ + +D D ++ C FAFD+LY+ +V+ +SL+ER LL+ KP +G
Sbjct: 611 LMTRKKKDVKIEDVKVKVCVFAFDLLYLNGEAVVEKSLRERRTLLESSFKPIEG------ 664
Query: 379 PDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRS 435
+ +H+ Q +DE++ F E+++ EG+++K L S +EP RS
Sbjct: 665 -EFAYATHMNGQ----------ELDEIQTFLDESVKASCEGLMVKMLDGTESGYEPSKRS 713
Query: 436 GKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFC 494
WLK+K +Y+ G LD++++G YYG G+R FL+A P+ D Y + C
Sbjct: 714 RNWLKIKKDYLSGIGDSLDLVVLGAYYGKGKRTSVYGAFLLACY-NPSSDKYE----TVC 768
Query: 495 RVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKS 550
+GTG S+ L+ + T+LK + PK FY ++ + +PDVW E K+
Sbjct: 769 NIGTGFSEAVLEELHTQLKDTV--IDRPK----PFYSHSSGGQHQPDVWFEPRFVWEVKT 822
Query: 551 IILSITSDIRTIRSEVF----SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
L+++ + E + SLRFPR ++R DK + + E+
Sbjct: 823 ADLTLSPRYKAGCGEGVDPSGTKGISLRFPRFIKLRDDKKPDEATSSRQVAEM 875
>gi|299115435|emb|CBN75600.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1043
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 176/384 (45%), Gaps = 48/384 (12%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-KNGSEIHYFSRSFLDHSE 279
G V P LA ++L G+E E K+DG R Q+H K + +FSR+ D S
Sbjct: 649 GVPVLPMLAKPTKSIGEVLQRLSGQEFTCEYKYDGVRAQVHHKEDGSLRFFSRNSKDSSS 708
Query: 280 YGHAMSKIIEQNVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLC 337
+ +++ V V ++D E++ +D F + D ++
Sbjct: 709 ELPDLIPVMKDCVKEGVSSYVIDTEVVAYDRETGNLLPFQMLSTRGRKDVDAEDVKVKVI 768
Query: 338 YFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLE-TLVPDHGLNSHVRPQGEPCWS 396
AFD+LY+ S++ + LK+R LL+ K GR DH + P
Sbjct: 769 VEAFDMLYLNGQSLLQKPLKQRRRLLRSTFKEVDGRFRFATFMDHKEDGDTGP------- 821
Query: 397 LVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-----G 449
+E+F E ++ EG+++K L S +EP RS WLKLK +Y++A G
Sbjct: 822 --------IEEFLSEAVKGNCEGLMVKTLTANSSYEPSKRSLNWLKLKKDYLQADGGGVG 873
Query: 450 SDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV 509
LD++ IG ++G G+R G+ +L+A E PD + S C++GTG +DE L++
Sbjct: 874 DSLDLVPIGAFFGKGKRTGKYGAYLLACYE---PDR--EEYQSVCKIGTGFTDEILNSFW 928
Query: 510 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRS 564
+LK E+ P +Y V ++ PDVW+ +P K LS + +
Sbjct: 929 EELK------EHTVEQRPRYYNVADSLS--PDVWL-APHKVWEVKCADLSKSPVHKAAIG 979
Query: 565 EVFSAP---YSLRFPRIDRVRYDK 585
++ P S+RFPR+ R R DK
Sbjct: 980 KIAQEPDRGISIRFPRLLREREDK 1003
>gi|218883590|ref|YP_002427972.1| ATP-dependent DNA ligase [Desulfurococcus kamchatkensis 1221n]
gi|218765206|gb|ACL10605.1| ATP-dependent DNA ligase [Desulfurococcus kamchatkensis 1221n]
Length = 610
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 143/566 (25%), Positives = 250/566 (44%), Gaps = 82/566 (14%)
Query: 72 NCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISG--------- 122
L+ A+ ++ +S++A + A + G+ VA ++ R G G
Sbjct: 71 KLLVKAIALATNSSEA------QVEDLAKSLGDLGKVAEQLKSRISGRQQGVTLFSFTQQ 124
Query: 123 --GLTIKELNDLLDRLASSENRAEK---ISVLSTLIKKTNAQEMKWIIMIILKDLKLGIS 177
LT+ ++ D L R+A ++ K I +L+ L+++ + +E K+I+ L++GI
Sbjct: 125 QPELTVNKVYDTLVRVAMAQGEGSKDLKIRLLAGLLREASPKEAKFIVRFAEGRLRVGIG 184
Query: 178 EKSIFHEF----------HPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQDI--EVGKAVR 225
E ++ E +N+ DL V K+ N +++ EVG +R
Sbjct: 185 EATVMDALAITYGGGAAARQVIERAYNLRADLGEVA-KILALNGLEALRNVRPEVGVPIR 243
Query: 226 PQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMS 285
P LA R+ D K+ G + +E K+DG+R QIHK ++ FSR + + +
Sbjct: 244 PMLAERLSDPKEILEKVGG-DAFVEYKYDGERAQIHKKDDKVWIFSRRLENITHQYPDVI 302
Query: 286 KIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARD----GLSSDRQLCYFAF 341
++ ++ I++GE++ +D F QE+ R + + F F
Sbjct: 303 ELARDHLKAREVIVEGEIVAYDLDTGELKPF---QELMHRKRKHEVRTALKEYPVKVFLF 359
Query: 342 DVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHN 401
D+LY + L R L ++V + + + ++R +
Sbjct: 360 DLLYADGRDYTIEPLPVRRGKLLEIVDRTD--------EFTVAEYIR----------TSD 401
Query: 402 VDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIG 458
V E+EKFF + I + EG+++K L GS ++ G R W+K K +Y D +D++++G
Sbjct: 402 VKELEKFFLKAISDGAEGVMVKALHDGSIYQAGTRGWLWIKFKRDYRSEMIDTVDLVVVG 461
Query: 459 GYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRK 518
+YG GRRGG+ L+A A + F + C+VG+G DE+LD + LKPY R
Sbjct: 462 AFYGKGRRGGKYGALLMA-----AYNDEKDVFETVCKVGSGFKDEDLDKLPEILKPYIRD 516
Query: 519 YEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFS-----APYSL 573
+ P+ ++ PDVW+E + I+ + I + + A S+
Sbjct: 517 RKSPRVV----------AEMEPDVWVEPALVAEIIGAELTLSPIHTCAYGRIKSDAGLSI 566
Query: 574 RFPRIDRVRYDKPWHDCLDVQSFVEL 599
RFPR R R DK D VE+
Sbjct: 567 RFPRFIRWRPDKRPEDATTSNELVEM 592
>gi|321262088|ref|XP_003195763.1| DNA ligase [Cryptococcus gattii WM276]
gi|317462237|gb|ADV23976.1| DNA ligase, putative [Cryptococcus gattii WM276]
Length = 803
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 128/510 (25%), Positives = 228/510 (44%), Gaps = 94/510 (18%)
Query: 141 NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEF------------HPD 188
++A+K+ ++ L+ + E K+II + L++G+++K++ P
Sbjct: 316 SQAKKVGIIKKLLAACQSTEAKFIIRSLEGKLRIGLADKTVVVALAHAIVLKTIGDKKPS 375
Query: 189 AEDL--------------FNVTCDLKLVCEKLKDRNQRHKRQDIEV--GKAVRPQLAMRI 232
E L ++ LV L R+ ++ G ++P LA
Sbjct: 376 PEKLAIMLEQGAETVKAVYSELPSYDLVIPALLQDGVEGLRKHCKLTPGVPLKPMLAKPT 435
Query: 233 GDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHS-EYGHAMSKIIE 289
+ GKE E K+DG+R Q+H ++G+ I FSR+ + S +Y + +I
Sbjct: 436 KAITEVLDRFEGKEFTCEYKYDGERAQVHLLEDGT-ISVFSRNSENMSAKYPDLIDQIPR 494
Query: 290 Q-NVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLY 345
++D E + +D + F Q++++ R + ++ ++ FAFD+LY
Sbjct: 495 ALKPTAKTFVIDAEAVAYDLETKKILPF---QDLSRRKRKDVKAEDITVRVHIFAFDLLY 551
Query: 346 VGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEV 405
+ S++ + LKER LLQ+ +P + G S +E+
Sbjct: 552 LNGESLLAKELKERRRLLQEHFQPVESEFAFAKSSDGSTS-----------------EEI 594
Query: 406 EKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYY 461
+ F +E++++ EG+++K L S +EP RS WLKLK +Y+ G LD++++G Y+
Sbjct: 595 QAFLEESVKDGCEGLMVKMLTSEASTYEPSRRSMNWLKLKKDYLSGVGDSLDLVVVGAYH 654
Query: 462 GSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEY 521
G G+R FL+A + PD+ + + C++GTG S+E ++TK YE
Sbjct: 655 GKGKRTAVYGAFLLACYD---PDS--EHYQTICKIGTGFSEE----ILTKF------YEL 699
Query: 522 PKRAPPSFYQVTNNSKE----RPDVWIESPEKSIILSITSDIRTIRSEVFSAPY------ 571
K P V E +PDVW E + + +T+D+ S V++A +
Sbjct: 700 LK---PLELGVVRGDIEVGGAKPDVWFEP--RVVWEVLTADLSL--SPVYAAAHGVIDSR 752
Query: 572 --SLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
SLRFPR R+R DK + + E
Sbjct: 753 GISLRFPRFIRIRDDKSADEATTAEQVCEF 782
>gi|390479226|ref|XP_002762363.2| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1-like [Callithrix
jacchus]
Length = 1009
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 133/539 (24%), Positives = 221/539 (41%), Gaps = 92/539 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFH------ 186
+ RL S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 500 IARLTGSASTAKKIDIIKALFVACRHSEARYIARSLSGRLRLGLAEQSVLAALSQAMSLT 559
Query: 187 PDAED---------------------------LFNVTCDLK-------LVCEKLKDRNQR 212
P ++ L C++ ++ E +R
Sbjct: 560 PPGQEFPLAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIVPVLLEHGLERLPE 619
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH E+ FS
Sbjct: 620 HCK--LNPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALESGEVKIFS 677
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + V ILD E + WD + F + D
Sbjct: 678 RNQEDNTGKYPDIISRIPRIKLPSVTSFILDAEAVAWDREKKQIQPFQVLTTRKRKEVDA 737
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ ++G
Sbjct: 738 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFAT----------- 786
Query: 390 QGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIR 447
SL +V+++ +F ++++++ EG+++K D+ + +E RS WLK+K +Y+
Sbjct: 787 ------SLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKMKKDYLS 840
Query: 448 A-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 506
G LD+++IG Y G G+R G FL+A D + C++GTG SDEEL+
Sbjct: 841 GVGDTLDLVVIGAYLGRGKRAGRYGGFLLACY-----DEDSEELQAICKLGTGFSDEELE 895
Query: 507 AVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSD 558
A L+ P R Y V + PD W++ K LS++
Sbjct: 896 AHHQSLQALVLPSPRPY------------VRIDDAVTPDHWLDPSAVWEVKCADLSLSPI 943
Query: 559 IRTIRSEVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGG 615
R V S SLRFPR RVR DK P Q S Q+G+E G
Sbjct: 944 YPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEEDTG 1002
>gi|448640231|ref|ZP_21677285.1| DNA ligase [Haloarcula sinaiiensis ATCC 33800]
gi|445762021|gb|EMA13255.1| DNA ligase [Haloarcula sinaiiensis ATCC 33800]
Length = 554
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 220/482 (45%), Gaps = 86/482 (17%)
Query: 125 TIKELNDLLDRLAS---SENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSI 181
T+ EL+D L LA+ S ++ K+ +L L + ++ E ++ ++L ++++G+ E ++
Sbjct: 120 TVAELDDELRNLAAVDGSGSQGTKVDILFGLFSRCSSTEAGYLARLVLSEMRIGVGEGTV 179
Query: 182 -------FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRH-KRQDIEVGKAVRPQLAM--R 231
F E V+ D +V E +D + +E+G+ V+ LA
Sbjct: 180 RDAAAAAFDVSVEAVERAVQVSNDYGMVAEVARDEGESGLATVTLEIGRPVQAMLAQAGT 239
Query: 232 IGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE-- 289
+ A W + +E K+DG R+Q+H +G + FSR+ E + +++E
Sbjct: 240 VAGALEDWDR-----AAVEWKYDGARVQVHFDGEDARLFSRNM---EEVTDPLPEVVETV 291
Query: 290 QNVLVDRCILDGEMLVWDTSLNR--FAE----FGSNQEIAKAARDGLSSDRQLCYFAFDV 343
++ L ILDGE++ D + F E F ++A AAR+ D + AFD
Sbjct: 292 ESTLDAPAILDGEVVAVDNGGDPLPFQEVLRRFRRKHDVA-AARE----DVAVRLHAFDC 346
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
L+ ++ +L+ RH+ RLE+L P +S V Q W ++ + D
Sbjct: 347 LHAAGEDLLDAALETRHD-----------RLESLFP---ADSDVVSQ---MW--LSDDPD 387
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGS 463
E+E ++ EGI+LKD + + PG R W K KP+ LD ++ G +G
Sbjct: 388 EIEDLETAALDAGQEGIMLKDPTAAYSPGKRGKHWRKRKPDV----ETLDCVVTGAEWGE 443
Query: 464 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
GRR + F +++ D Y + V TG++DEELD + + +PY R
Sbjct: 444 GRRANVLGSFELSV---RTDDGYA----TVGNVATGITDEELDDLTERFEPYIR------ 490
Query: 524 RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 583
S++ DV + + +++ + + S+ +++ Y+LRFPR VR
Sbjct: 491 ------------SEDGRDVVL---DPAVVFEVGYE-EIQASQSYASGYALRFPRFLSVRE 534
Query: 584 DK 585
DK
Sbjct: 535 DK 536
>gi|156033275|ref|XP_001585474.1| hypothetical protein SS1G_13713 [Sclerotinia sclerotiorum 1980]
gi|154699116|gb|EDN98854.1| hypothetical protein SS1G_13713 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 914
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 208/499 (41%), Gaps = 106/499 (21%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH-------PDAEDLFNVTCD 198
K A E K+I+ + L+LG++EK++ HE P E L N
Sbjct: 419 KGGASEAKYIVRFLEGKLRLGLAEKTVLVSLAQAMVCHEIEAKGSGKVPSTEQLANGESI 478
Query: 199 LKLVCE--------------KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHG 244
LK V LKD + ++ G ++P LA +
Sbjct: 479 LKAVHSYDVIIPAMLEHGIFSLKDNCK------LQPGVPLKPMLAKPTKAITEVLDRFEN 532
Query: 245 KEVVIECKFDGDRIQIH--------------------KNGSEIHYFSRSFLDHSE-YGHA 283
+ E K+DG+R QIH G FSR+ D S+ Y
Sbjct: 533 QTFTCEYKYDGERAQIHYVAKDSPKQYLGATPAAAKPSAGGLAAIFSRNSEDLSKKYPDI 592
Query: 284 MSKIIEQNVLVDR----CILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYF 339
+ K+ N V +LD E + WD + F K ++C F
Sbjct: 593 LGKL---NTWVKEDTKSFVLDCETVAWDMVEKKVLPFQQLMTRKKKDVKVEDVKVKVCVF 649
Query: 340 AFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVA 399
AFD+L++ +V+ +SL+ER LL + +P +G + S+
Sbjct: 650 AFDLLFLNGEAVVEKSLRERRALLHEAFQPVEGEFQF-----------------ATSMNG 692
Query: 400 HNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 455
+DE++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++
Sbjct: 693 QEIDEIQTFLDESVKASCEGLMVKMLDGTESGYEPSKRSRNWLKIKKDYLSGIGDSLDLV 752
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
++G YYG G+R FL+A P DTY + C +GTG S++ L+ + +L
Sbjct: 753 VLGAYYGRGKRTSVYGAFLLA-CHNPHTDTYE----TICNIGTGFSEQVLEELHAQLSAI 807
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVF--- 567
+ PK FY ++ ++ +PDVW E P+ K+ L+++ + E
Sbjct: 808 V--IDRPK----PFYSHSSGNQHQPDVWFE-PKYVWEVKTADLTLSPRYKAGCKEGVDKG 860
Query: 568 -SAPYSLRFPRIDRVRYDK 585
SLRFPR ++R DK
Sbjct: 861 GEKGISLRFPRFIKIRDDK 879
>gi|380798769|gb|AFE71260.1| DNA ligase 1, partial [Macaca mulatta]
Length = 443
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 186/417 (44%), Gaps = 54/417 (12%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHS- 278
G ++P LA ++ E K+DG R QIH G E+ FSR+ D++
Sbjct: 61 GIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTG 120
Query: 279 EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLC 337
+Y +S+I + + V ILD E + WD + F + D Q+C
Sbjct: 121 KYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVC 180
Query: 338 YFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW-- 395
+AFD++Y+ S++ + L R +LL++ + V +GE +
Sbjct: 181 LYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVETEGEFVFAT 221
Query: 396 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 452
SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 222 SLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 281
Query: 453 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 512
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ L
Sbjct: 282 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEELEEHHQSL 336
Query: 513 K----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRS 564
K P R Y V + PD W++ K LS++ R
Sbjct: 337 KALVLPSPRPY------------VRIDGAVTPDHWLDPSAVWEVKCADLSLSPIYPAARG 384
Query: 565 EVFS-APYSLRFPRIDRVRYDK-PWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
V S SLRFPR RVR DK P Q S Q+G++ G +D
Sbjct: 385 LVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQSQIQNQQGEDSGSDPED 441
>gi|340905275|gb|EGS17643.1| DNA ligase-like protein [Chaetomium thermophilum var. thermophilum
DSM 1495]
Length = 863
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 128/508 (25%), Positives = 214/508 (42%), Gaps = 94/508 (18%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH-----PDAEDLFNVTCDLK 200
K E K+++ + L+LG++EK++ HE P DL LK
Sbjct: 366 KGGPSEAKFLVRFLEGKLRLGLAEKTVIVSLAQAMVAHEAWKKGKVPSTADLEKGEQILK 425
Query: 201 LVCEKLKDRN------------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVV 248
V +L + + + G ++P LA + G+
Sbjct: 426 QVYSELPSYDVIIPAMVKHGIFNLREHCKLRPGVPLKPMLAKPTKAITEVLDRFEGQTFT 485
Query: 249 IECKFDGDRIQIHKNGSEI-HYFSRSFLDHS-EYGHAMSKIIEQN----------VL--- 293
E K+DG+R QIH + S+S S E G ++ I +N VL
Sbjct: 486 CEYKYDGERAQIHYVAKDTGEALSQSASGASKEVGKGVAAIFSRNSEDLSKKYPDVLAKL 545
Query: 294 -------VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYV 346
+LD E + WD + + F + K ++C FAFD+LY+
Sbjct: 546 PTWVKEDTKSFVLDCESVAWDVNEKKVLPFQTLMTRKKKDVKVEDVKVKVCVFAFDLLYL 605
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
+++H+SL+ER EL+ K +P +G + +H+ Q +++++
Sbjct: 606 NGEAIVHKSLRERRELMYKAFQPVEG-------EFAFATHMNSQ----------ELEDIQ 648
Query: 407 KFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYG 462
F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G YYG
Sbjct: 649 AFLDESVKASCEGLMVKMLDGEESGYEPSKRSRNWLKIKKDYLSGVGDSLDLVVLGAYYG 708
Query: 463 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
G+R FL+A P +TY + C +GTG SD L+ + +L E
Sbjct: 709 KGKRTSVYGAFLLACY-NPIKETYE----TVCNIGTGFSDSVLEELYKQLS------EIV 757
Query: 523 KRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPY----------- 571
P FY ++ ++ +PDVW E + + T+D+ T+ + Y
Sbjct: 758 IDRPKPFYSHSSTAQHQPDVWFEP--RYVWEVKTADL-TLSPRYKAGMYEGVDPSGEKGI 814
Query: 572 SLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
SLRFPR +VR DK + + E+
Sbjct: 815 SLRFPRFIKVRDDKKPDEATSSRQVAEM 842
>gi|356542672|ref|XP_003539790.1| PREDICTED: DNA ligase 1-like [Glycine max]
Length = 776
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 136/530 (25%), Positives = 241/530 (45%), Gaps = 83/530 (15%)
Query: 103 GNFPMVAAEVLQRRQGMISG-GLTIKELND---LLDRLASSENRAEKISVLSTLIKKTNA 158
G+ +VA E + M LTI ++ + L+ + + E++ +K + + L+
Sbjct: 250 GDLGLVAKESRSSQPMMFKPEALTITKVFNTFRLIAKESGKESQEKKKNHIKALLVAATD 309
Query: 159 QEMKWIIMIILKDLKLGISEKS---------IFHEFH----PDAEDLFNVTCDL-KLVCE 204
E +++I ++ L++G +EK+ ++ E H PD + ++ K V
Sbjct: 310 CEPQYLIRLLQTKLRIGYAEKTLLAALGQAAVYTEEHSKPPPDIQSPLEEASEIVKQVYS 369
Query: 205 KLKDRNQ------------RHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECK 252
L D ++ K+ + G + P L+ K E E K
Sbjct: 370 VLPDYDKIISALLTEGLWMLPKKCNFTPGVPIGPMLSKATKGVSEILNKFQDVEFTCEYK 429
Query: 253 FDGDRIQIH--KNGSEIHYFSRSFLDHS----EYGHAMSKIIEQNVLVDRCILDGEMLVW 306
+DG+R QIH +NGS + +SR+ ++ + A+S++ + V ILD E++ +
Sbjct: 430 YDGERAQIHYLENGS-VEIYSRNAERNTGKFPDVVAAVSRL--KKPTVSSFILDCEIVAY 486
Query: 307 DTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELL 363
D S + F Q ++ AR + + +C FAFD+LY+ +++ ++L+ R E L
Sbjct: 487 DRSTQKIRSF---QMLSTRARKNVEIEDITVGVCIFAFDLLYLNGQALLQENLRVRREHL 543
Query: 364 QKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLK 423
+ G L+ ++ +++V+E++ F + + EG+++K
Sbjct: 544 YASFEEEPGFLQFAT-----------------TITSNDVEEIQNFLDQAVGASCEGLIIK 586
Query: 424 DLG--SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAER 480
L + +EP RS WLKLK +Y+ + G LD++ I ++G G+R G FL+A
Sbjct: 587 TLNEDATYEPSKRSLNWLKLKKDYMDSIGDSLDLVPIAAFHGRGKRTGVYGAFLLACY-- 644
Query: 481 PAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERP 540
D F S C++GTG S +AV+ + R PK P ++Y+ P
Sbjct: 645 ---DNDNEEFQSICKIGTGFS----EAVLEERSSSLRSKVIPK--PKAYYRFGETIN--P 693
Query: 541 DVWIESPE----KSIILSITSDIRTIRSEV-FSAPYSLRFPRIDRVRYDK 585
DVW E+ E K+ L+I+ R V + SLRFPR+ RVR DK
Sbjct: 694 DVWFEASEVWEVKAADLTISPVHRAAVGIVDPNKGISLRFPRLLRVRPDK 743
>gi|209881935|ref|XP_002142405.1| DNA ligase I, ATP-dependent family protein [Cryptosporidium muris
RN66]
gi|209558011|gb|EEA08056.1| DNA ligase I, ATP-dependent family protein [Cryptosporidium muris
RN66]
Length = 820
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 161/665 (24%), Positives = 280/665 (42%), Gaps = 118/665 (17%)
Query: 13 VSLFNWIQKTKPAAKKR------SKFRKFLDTYCDSVDYFSALRLILPSL--DRERGSYG 64
+SL ++ T +KK + FR + Y + D A + L + D E +G
Sbjct: 174 LSLIESLKGTGSGSKKNCIVVLANLFRTII--YHNPTDLIPATYICLNKISPDYENREFG 231
Query: 65 LKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGL 124
+ ES++ C+ + LG S++S + G+ + G + AA R L
Sbjct: 232 VGESIIIKCIAEVLGRSENS-----IKEDLASGSYEDLGE--IAAASRYAMRVLFEPPRL 284
Query: 125 TIKELNDLLDRLAS---SENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSI 181
TI+E+ + + LA ++ + +K + L+ E+K+II + L++G+ + ++
Sbjct: 285 TIQEVFNEMYALACIHGNQAQQKKRDKIKKLMVAAKQSEVKFIIRFLQGRLRIGVQQVTV 344
Query: 182 FH--------------------------EFHPDAEDLFNVTCDLK-----LVC-----EK 205
++ +F + E L N D++ +C EK
Sbjct: 345 YNSLANSFVLTRNSDENSKYSDIRLQEFKFKTNIE-LDNTILDMEKAFRSSLCQLPNIEK 403
Query: 206 LKD-------RNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRI 258
+ D N + + G P LA + + E K+DG+R
Sbjct: 404 IIDIALKGVTPNDLRLKCTLIPGIPCEPMLARPTKGISEILSRFEKMKFTAEYKYDGERA 463
Query: 259 QIH-----KNGSEIHYFSRSFLDHSEYGHAMSKIIEQNVL--VDRCILDGEMLVWDTSLN 311
QIH I FSR+ + + ++ I+++++ V+ CILD E++ +
Sbjct: 464 QIHVYKLESGNYNIDIFSRNLENITNRYPDVAISIKESLINTVEDCILDCEVVAYSIENE 523
Query: 312 RFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVK 368
+ F Q ++ R ++ + +C F FD ++ S+I SL ER E L+K +
Sbjct: 524 KILPF---QVLSTRKRKDVNINDIKVHVCVFLFDCMHFNGNSLIKYSLAERREYLKKCIL 580
Query: 369 PSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--G 426
++ + + + +D +E F E IEN EG+++K L
Sbjct: 581 EIPNKIYFV-----------------KNCITDKIDVLETFLAEAIENNCEGLMVKTLNEN 623
Query: 427 SKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDT 485
+ +EP RS WLK+K +YI D +DV+ I +YG G+R G FL+A+ P +
Sbjct: 624 ASYEPSKRSLNWLKIKKDYIDGIMDSIDVVPIAAFYGKGKRCGIYGTFLLAVY-NPNSEI 682
Query: 486 YPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE 545
Y + C++GTG S+E ++ +L +Y + S+Y V + S +PDVW E
Sbjct: 683 YE----TICKIGTGFSEE----ILQRLYNMLTEYIISDISAKSYYHVDSISL-KPDVWFE 733
Query: 546 SPE-----KSIILSITSDIRT---IRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFV 597
P+ K LS++ T IR E LRFPR R+R DK D +
Sbjct: 734 -PKFIWEVKGADLSLSPVHNTAFGIREE--GKGIGLRFPRFIRIREDKKPEDATTCDQII 790
Query: 598 ELVHS 602
+L S
Sbjct: 791 DLFDS 795
>gi|406864570|gb|EKD17615.1| putative DNA ligase (Polydeoxyribonucleotide synthase) [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 918
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 135/546 (24%), Positives = 228/546 (41%), Gaps = 103/546 (18%)
Query: 131 DLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF-------- 182
DL+ +L ++ + A K + K E K+I+ + L+LG++EK++
Sbjct: 396 DLIGKLLAAADVA-KPGKVDITKDKGGPSEAKFIVRFLEGKLRLGLAEKTVLVSLAQAMV 454
Query: 183 -HEFH-------PDAEDLFNVTCDLKLVCEKLKDRN------------QRHKRQDIEVGK 222
HE P E L LK V +L + ++ G
Sbjct: 455 CHETEAKGSGKVPTTEQLAKGEAILKAVHSELPSYDVIIPAMLEHGIFNLRDNCKLQPGV 514
Query: 223 AVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--------------------K 262
++P LA + + E K+DG+R QIH
Sbjct: 515 PLKPMLAKPTKAITEVLDRFENQTFTCEYKYDGERAQIHYVAKDSAQQYRGSAESATKTA 574
Query: 263 NGSEIHYFSRSFLDHSE-YGHAMSKIIEQNVLVD----RCILDGEMLVWDTSLNRFAEFG 317
+G FSR+ D S+ Y ++K+ N V ++D E + WD + F
Sbjct: 575 HGGLAAIFSRNSEDLSKKYPDILAKL---NTWVKPDTKSFVMDCETVAWDLEEKKVLPF- 630
Query: 318 SNQEIAKAARDGLSSDRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLE 375
Q + + +D D ++ C FAFD+L++ +V+ +SL+ER ELL + P +G
Sbjct: 631 -QQLMTRKKKDVKIEDVKVKVCVFAFDLLFLNGEAVVGKSLRERRELLHESFTPVEGEFS 689
Query: 376 TLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPG 432
S+ ++E++ F E+++ EG+++K L S +EP
Sbjct: 690 F-----------------ATSMNGQEIEEIQIFLDESMKASCEGLMVKMLDGAESGYEPS 732
Query: 433 DRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFI 491
RS WLK+K +Y+ G LD++++G Y+G G+R FL+A + DTY
Sbjct: 733 KRSRNWLKIKKDYLSGVGDSLDLVVLGAYHGKGKRTSVYGAFLLA-SYNSTSDTYE---- 787
Query: 492 SFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE--- 548
+ C +GTG S+ L+ + +L P + PK FY + + +PDVW E P+
Sbjct: 788 TICNIGTGFSEAVLETLHAELSPLI--IDRPK----PFYSHSAGNTHQPDVWFE-PKYVW 840
Query: 549 --KSIILSITSDIRTIRSEVFSA----PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
K+ L+++ + +E SLRFPR +VR DK + + VE+
Sbjct: 841 EVKTADLTLSPRYKAGCNEGLEGGGDKGISLRFPRFIKVRDDKKPDEATGSRQVVEMYRK 900
Query: 603 SNGTTQ 608
T+
Sbjct: 901 QESVTK 906
>gi|429856550|gb|ELA31455.1| DNA ligase [Colletotrichum gloeosporioides Nara gc5]
Length = 901
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 131/542 (24%), Positives = 231/542 (42%), Gaps = 97/542 (17%)
Query: 131 DLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSI--------- 181
D + +L S+ + A I + K E K+++ + L+LG++EK++
Sbjct: 381 DSIKKLLSAAD-AHNIGKVDITKDKGGPSEAKYLVRFLEGKLRLGLAEKTVLVSLAQAVT 439
Query: 182 FHEF-----HPDAEDLFNVTCDLKLVCEKLKDRN------------QRHKRQDIEVGKAV 224
+HE P D+ LK V +L + + ++ G +
Sbjct: 440 YHEADAKGQSPKTTDVEQAEAVLKQVYSELPSYDVIIPAMVEHGIMNLREHCKLKPGVPL 499
Query: 225 RPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH---KNGSE--------------- 266
+P LA + + E K+DG+R QIH KN E
Sbjct: 500 KPMLAKPTKAITEVLDRFENQTFTCEYKYDGERAQIHYVAKNADEELSQSLPGATQAAAD 559
Query: 267 --IHYFSRSFLDHSE-YGHAMSKI---IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQ 320
FSR+ D S+ Y ++K+ ++ + +LD E + WD + F Q
Sbjct: 560 GVASIFSRNSEDLSKKYPDILAKLHTWVKPDT--KSFVLDCETVAWDVDEKKVLPF--QQ 615
Query: 321 EIAKAARDGLSSDRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLV 378
+ + +D D ++ C FAFD+LY+ +++ + L+ER ELL+ P +G
Sbjct: 616 LMTRKKKDVKIEDVKVKVCVFAFDLLYLNGEAIVEKPLRERRELLENAFAPVEGEF---- 671
Query: 379 PDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRS 435
L +H+ Q ++++++F E+++ EG+++K L S +EP RS
Sbjct: 672 ---ALATHMNGQ----------ELEQIQEFLDESVKASCEGLMVKMLDGSESGYEPSKRS 718
Query: 436 GKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFC 494
WLK+K +Y+ G LD++++G Y+G G+R FL+A P+ D+Y + C
Sbjct: 719 RNWLKIKKDYLSGIGDSLDLVVLGAYHGKGKRTSVYGAFLLACY-NPSSDSYE----TVC 773
Query: 495 RVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKS 550
+GTG S+ L+ + +L + PK FY ++ + +PDVW E K+
Sbjct: 774 NIGTGFSEAVLEELHKQLSDIV--IDLPK----PFYAHSSGGQHQPDVWFEPRYVWEVKT 827
Query: 551 IILSITSDIRTIRSEVFSAP----YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGT 606
L+++ + E SLRFPR +VR DK + + E+
Sbjct: 828 ADLTLSPRYKAGCKEGVDPAGEKGISLRFPRFIKVRDDKKPDEATSSRQVAEMYRKQESV 887
Query: 607 TQ 608
T+
Sbjct: 888 TR 889
>gi|388854717|emb|CCF51610.1| probable CDC9-DNA ligase I [Ustilago hordei]
Length = 858
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 141/545 (25%), Positives = 242/545 (44%), Gaps = 102/545 (18%)
Query: 136 LASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF------------- 182
++ ++++ KI ++ L+ +E K++I + L++G++E+SI
Sbjct: 352 VSGNKSQDRKIGMIKKLLASCQGEEPKFLIRSLEGKLRIGLAERSILVSLARAVVISRLG 411
Query: 183 ------------HEFHPDAEDLFNVTCDLK---LVCEKLKDRNQRHKRQDIEV--GKAVR 225
+ E + V +L LV L R++ ++ G ++
Sbjct: 412 KNISKLSTEALTRQLEEGTELVKAVYSELPSYDLVIPALLKGGVEGLREECKLTPGVPLK 471
Query: 226 PQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGS-EIHYFSRSFLDHSEYGHAM 284
P LA + GK E K+DG+R Q+H S ++ FSR+ D S
Sbjct: 472 PMLAKPTKAITEVLDRFEGKPFTCEYKYDGERAQVHLLPSGKLAVFSRNSEDMS---VKY 528
Query: 285 SKIIEQNVLVDRCI--------LDGEMLVW-------DTSLNRFAEFGSNQEIAKAARDG 329
++EQ + RCI LD E W +T + A+ QE+++ R
Sbjct: 529 PDLVEQ---IPRCIKPSVKSFVLDAEAAAWKKAEPNPETGVMEPAKLLPFQELSRRKRKD 585
Query: 330 LSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSH 386
+ ++ ++ F FD+LY+ S++H SL ER +LLQ +P + D+
Sbjct: 586 VKAEDIKIKVKLFGFDLLYLNGESLLHLSLGERRKLLQDHFQPVEDEF-----DYA---- 636
Query: 387 VRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKP 443
+ E C S V+E+ F ++++ EG+++K L S +EP RS WLKLK
Sbjct: 637 ---RSEDCTS-----VEEISVFLDKSVKEGCEGLMVKMLSGPDSTYEPSRRSMNWLKLKK 688
Query: 444 EYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSD 502
+Y+ G LD+++IGGYYG G+R FL+A D+ + S C++GTG ++
Sbjct: 689 DYLAGTGDSLDLVVIGGYYGKGKRTNVYGAFLLACY-----DSDSETYQSICKIGTGFTE 743
Query: 503 EELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTI 562
++L++ LK E +Y V + +PDV+ E+ K + +T+D+
Sbjct: 744 QDLESHYKVLK------ELEITGKKGYYDV---GEAKPDVYFEA--KVVWEVLTADLSL- 791
Query: 563 RSEVFSAP--------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYG 614
S V++A SLRFPR RVR DK + + + + + K K G
Sbjct: 792 -SPVYTAAKGLIEQRGVSLRFPRFIRVRDDKMVEESTSPEQIEAMYRNQTVNSAKSKSGG 850
Query: 615 GLQDD 619
G +DD
Sbjct: 851 GDEDD 855
>gi|55377348|ref|YP_135198.1| DNA ligase [Haloarcula marismortui ATCC 43049]
gi|74520109|sp|Q5V4R0.1|DNLI_HALMA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|55230073|gb|AAV45492.1| DNA ligase [Haloarcula marismortui ATCC 43049]
Length = 554
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 220/482 (45%), Gaps = 86/482 (17%)
Query: 125 TIKELNDLLDRLAS---SENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSI 181
T+ EL+D L LA+ S ++ K+ +L L + ++ E ++ ++L ++++G+ E ++
Sbjct: 120 TVAELDDELRNLAAVDGSGSQGTKVDILFGLFSRCSSTEAGYLARLVLSEMRIGVGEGTV 179
Query: 182 -------FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRH-KRQDIEVGKAVRPQLAM--R 231
F E V+ D +V E +D + +E+G+ V+ LA
Sbjct: 180 RDAAAAAFDVPVEAVERAVQVSNDYGMVAEVARDEGESGLATVTLEIGRPVQAMLAQAGT 239
Query: 232 IGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE-- 289
+ A W + +E K+DG R+Q+H +G + FSR+ E + +++E
Sbjct: 240 VAGALEDWDR-----AAVEWKYDGARVQVHFDGEDARLFSRNM---EEVTDPLPEVVETV 291
Query: 290 QNVLVDRCILDGEMLVWDTSLNR--FAE----FGSNQEIAKAARDGLSSDRQLCYFAFDV 343
++ L ILDGE++ D + F E F ++A AAR+ D + AFD
Sbjct: 292 ESTLDAPAILDGEVVAVDDGGDPLPFQEVLRRFRRKHDVA-AARE----DVAVRLHAFDC 346
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
L+ ++ +L+ RH+ RLE+L P +S V Q W ++ + +
Sbjct: 347 LHAAGEDLLDAALETRHD-----------RLESLFP---ADSDVFSQ---MW--LSDDAE 387
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGS 463
E+E E + EGI+LKD + + PG R W K KP+ LD ++ G +G
Sbjct: 388 EIESLEAEALAAGQEGIMLKDPTAAYSPGKRGKHWRKRKPDV----ETLDCVVTGAEWGE 443
Query: 464 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
GRR + F +++ D Y + V TG++DEELD + + +PY R
Sbjct: 444 GRRANVLGSFELSV---RTDDGYA----TVGNVATGITDEELDDLTERFEPYIR------ 490
Query: 524 RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 583
S++ DV + + +++ + + S+ +++ Y+LRFPR VR
Sbjct: 491 ------------SEDGRDVVL---DPAVVFEVGYE-EIQASQSYASGYALRFPRFLSVRE 534
Query: 584 DK 585
DK
Sbjct: 535 DK 536
>gi|378733666|gb|EHY60125.1| DNA ligase 1 [Exophiala dermatitidis NIH/UT8656]
Length = 931
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 130/551 (23%), Positives = 228/551 (41%), Gaps = 97/551 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------H 183
++RL +S + + + K E K+++ + L+LG++EK++ H
Sbjct: 411 INRLMASADVSSASKAVDINKDKGGPSEAKFLVRFLEGKLRLGLAEKTVIVALAQAVVTH 470
Query: 184 EFH-----PDAEDLFNVTCDLKLVCEKLKDRN------------QRHKRQDIEVGKAVRP 226
E P + L LK V +L H+ ++ G ++P
Sbjct: 471 EAAKKGKVPSTDQLAKGEAALKTVYSELPSYEVIIPAMLEHGIFNLHESCKLQPGVPLKP 530
Query: 227 QLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIH------------------ 268
LA + GK+ E K+DG+R QIH E
Sbjct: 531 MLAKPTKSITEVLDRFEGKDFTCEYKYDGERAQIHYVAPEAKSEFPAAENTLAKDPKNVK 590
Query: 269 ----YFSRSFLDHSE-YGHAMSKIIEQNVLVDRC----ILDGEMLVWDTSLNRFAEFGSN 319
FSR+ D S+ Y + K+ N + +LD E + WD + F
Sbjct: 591 GLAAIFSRNSEDLSKKYPDILEKL---NTWIKPSTKSFVLDCETVAWDPQNKKVLPF--Q 645
Query: 320 QEIAKAARDGLSSDR--QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETL 377
Q + + +D +S+ ++C FAFD+L+ ++ +SL+ER E+L P +
Sbjct: 646 QLMTRKRKDVKTSEVTVKVCVFAFDLLFYNGQPLVKKSLRERREILHNAFVP-------V 698
Query: 378 VPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDR 434
V + S+ G+ ++++++ E+++ EG+++K L S +EP R
Sbjct: 699 VGEFSFASY----GD------TRDIEQIQHLLDESVKASCEGLMVKMLDTEESGYEPSKR 748
Query: 435 SGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISF 493
S WLK+K +Y+ G LD++++G YYG G+R FL+ A + + F +
Sbjct: 749 SRNWLKVKKDYLAGVGDSLDLVVLGAYYGKGKRTSWYGAFLLG-----AYNEETQTFETV 803
Query: 494 CRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----K 549
C +GTG S+ L+ L E P FY + ++PDVW E+ K
Sbjct: 804 CNIGTGFSEAILEEFYKDLS------ELVIDGPKPFYSHSTVKNDQPDVWFEARHVWEVK 857
Query: 550 SIILSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 608
+ L+++ R E+ SLRFPR + R DK + ++ E+ +
Sbjct: 858 TADLTLSPRYRAAIDEMGGKNGISLRFPRFIQRRDDKKPEEATTTKAIAEMYRKQEVVAR 917
Query: 609 KGKEYGGLQDD 619
+ + GG+ DD
Sbjct: 918 EARSKGGVDDD 928
>gi|406929835|gb|EKD65320.1| hypothetical protein ACD_50C00117G0002 [uncultured bacterium]
Length = 595
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 159/600 (26%), Positives = 265/600 (44%), Gaps = 114/600 (19%)
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGG 123
G+ E +A L A +K+ LI + K G+ +VA ++ + ++ ++
Sbjct: 59 GMAEKTVAQALAKAYSSTKEEV----LILYGK------VGDMGLVAEQLSKNQKSILRQA 108
Query: 124 ------LTIKELNDLLDRLA--SSENRAEK-ISVLSTLIKKTNAQEMKWIIMIILKDLKL 174
L++ E+ ++L ++A S E EK ++LS L+KK + K ++ I L +++L
Sbjct: 109 RDKNQKLSVSEVFEILTKIAKTSGEGTVEKRQTLLSDLLKKLDPVSAKHLVRIPLGNIRL 168
Query: 175 GISEKSIFHEFHPDA-----------------EDLFNVTCDLKLVCEKL----KDRNQRH 213
GI + ++ A E +N T DL L+ + L D Q+
Sbjct: 169 GIGDPTVLDGLAKAASNAAGAKFDRTMARKPLEGAYNRTSDLGLIAKTLWEEGLDSVQKL 228
Query: 214 KRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRS 273
K +++GK +R +L R+ + + K+ G+ + K+DG R+QIHK+G+++ FSR+
Sbjct: 229 K---VQIGKPIRSELCERLPNPEKVFEKM-GERIHATPKYDGFRVQIHKDGNKVSMFSRN 284
Query: 274 FLDHSEYGHAMSKIIE---QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG- 329
+ + H ++IE + V ILD E L + F F QE K R
Sbjct: 285 LENMT---HMFPELIEGALKQVRAKTAILDTEALAYQKESEEFLPF---QETTKRRRKHN 338
Query: 330 ---LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSH 386
++ L F FD+LYV S+I +L ER E+L+K VK + L+P G
Sbjct: 339 ILEMAKSLPLRAFVFDILYVDGKSLIDTALVERMEILKKTVKQD----DILIPSPG---- 390
Query: 387 VRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYI 446
+ + +++ +++I EG+V+K S +E G RS W+KLK
Sbjct: 391 ----------KILDDPKDLQLMLEDSISKGLEGVVVKKTESPYEAGGRSFNWVKLKRHSA 440
Query: 447 RAGSD-LDVLIIGGYYGSGRRGG-EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
D +D +I+G G G+R LV L D F++ ++GTGL+DEE
Sbjct: 441 GELQDTIDCVILGYISGKGKRTAFGAGALLVGLY-----DDDKDEFVTVSKIGTGLTDEE 495
Query: 505 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRS 564
+ K + P R NS P VWI SI++ + +D RS
Sbjct: 496 WRE-IHKRADKVKVDHKPARV---------NSLTIPSVWIRP---SIVIEVLAD-EITRS 541
Query: 565 EVFSA-----------PYSLRFPRIDRVR-YDKPWHDCLDVQSFVELVHSSNGTTQKGKE 612
V +A Y+LRFPR+ R DK D V+ + + + Q+GK+
Sbjct: 542 PVHTAGAIINDGVKEPGYALRFPRLVSFRGGDKRAEDATTVKELISMYN------QQGKK 595
>gi|424813986|ref|ZP_18239164.1| DNA ligase I, ATP-dependent, dnl1 [Candidatus Nanosalina sp.
J07AB43]
gi|339757602|gb|EGQ42859.1| DNA ligase I, ATP-dependent, dnl1 [Candidatus Nanosalina sp.
J07AB43]
Length = 563
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 130/556 (23%), Positives = 241/556 (43%), Gaps = 93/556 (16%)
Query: 64 GLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGG 123
G+ L + A G S+D V W+ G +A MV + QR ++S
Sbjct: 64 GVSSKTLVKIISRASGRSEDEITRV----WKNEGDLGDAAE-QMVDNKTQQR---LMSKE 115
Query: 124 LTIKELNDLLDRLASSENRA--------EKISVLSTLIKKTNAQEMKWIIMIILKDLKLG 175
LT++ + + L ++A E + +K S L+ L+ + E +++ II+ +L+LG
Sbjct: 116 LTVENVVERLQKVAKMEAKGLSQSVDQDKKQSELADLLSSADPVEARYLARIIINNLRLG 175
Query: 176 ISEKSI---FHEFHPDAEDL------FNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRP 226
++E +I E D E+ ++ + D V + + K ++++ + V
Sbjct: 176 VAEGTIRDALSEAFFDGENTQEIQRAYDFSNDFSEVSKACRQGLDAVKSIELQLNRPVNS 235
Query: 227 QLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSK 286
LA ++ + ++ G+ ++ K+DG R QIH N +I F+R D ++ +
Sbjct: 236 MLAKKVNTIEEGFEEV-GRPASVDYKYDGMRAQIHVNDGDIKVFTRRLEDVTKQFPDVVS 294
Query: 287 IIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR-----DGLSSDRQLCYFAF 341
+E+N+ D CILD E++ +D F Q+++K + L + F
Sbjct: 295 QVEENIDSDNCILDTEIVGYDPEDGSMIPF---QKLSKRIKRKYEIQKLKEQIPVTVRPF 351
Query: 342 DVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHN 401
D++Y+ +T ++ + ER + L+ +V S+ L+ + DH N
Sbjct: 352 DLIYL-ETPILERPYSERWDNLRDIVSESEDDLKLV--DHK---------------KTEN 393
Query: 402 VDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYY 461
++V++ + ++ EGI++K+L ++++PG+R G +KLKP LD+ I+G +
Sbjct: 394 PEQVQEMQQRSLSQGHEGIMMKNLDAEYKPGNRVGYMVKLKP----VMETLDLAIVGAKW 449
Query: 462 GSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYF----- 516
GRR + + + D + ++ TGL+DE+ + KLKP
Sbjct: 450 SEGRRSDWLGRLFIGCY-----DEENGTYQEIGKMATGLTDEQFQEITEKLKPLITEEDG 504
Query: 517 RKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFP 576
RK E R +E P +S+ Y+LRFP
Sbjct: 505 RKVEV--RPEVIVEVEYEEIQESP-------------------------TYSSGYALRFP 537
Query: 577 RIDRVRYDKPWHDCLD 592
R+ R R DK D L+
Sbjct: 538 RMKRFREDKEEADTLE 553
>gi|395862645|ref|XP_003803550.1| PREDICTED: DNA ligase 1 [Otolemur garnettii]
Length = 898
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 177/378 (46%), Gaps = 45/378 (11%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHS- 278
G ++P LA ++ E K+DG R QIH G E+ FSR+ D++
Sbjct: 517 GIPLKPMLAHPTRSVSEVLKRFDEAAFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTG 576
Query: 279 EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLC 337
+Y +S+I + + V ILD E + WD + F + D Q+C
Sbjct: 577 KYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVC 636
Query: 338 YFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW-- 395
+AFD++Y+ S++ + L R +LL++ + V +GE +
Sbjct: 637 LYAFDLIYLNGQSLVREPLSRRRQLLRE-------------------NFVETEGEFVFAT 677
Query: 396 SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDL 452
SL + +++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y+ G L
Sbjct: 678 SLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTL 737
Query: 453 DVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKL 512
D+++IG Y G G+R G FL+A + D + C++GTG SDEEL+ KL
Sbjct: 738 DLVVIGAYLGRGKRAGRYGGFLLA-----SYDQDSEELQAICKLGTGFSDEELEEHYQKL 792
Query: 513 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTIRSEVFS 568
+ AP S+ ++ + PD W++ K LS++ R V S
Sbjct: 793 QDLVLP------APRSYVRI--DGAVAPDHWLDPSTVWEVKCGDLSLSPIYPAARGLVDS 844
Query: 569 AP-YSLRFPRIDRVRYDK 585
SLRFPR RVR DK
Sbjct: 845 EKGISLRFPRFIRVREDK 862
>gi|154294102|ref|XP_001547494.1| hypothetical protein BC1G_14121 [Botryotinia fuckeliana B05.10]
Length = 919
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 127/498 (25%), Positives = 207/498 (41%), Gaps = 104/498 (20%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH-------PDAEDLFNVTCD 198
K A E K+I+ + L+LG++EK++ HE P E +
Sbjct: 424 KGGASEAKYIVRFLEGKLRLGLAEKTVLVSLAQAMVCHEIEAKGSGKVPSTEQMAKGESI 483
Query: 199 LKLVCE--------------KLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHG 244
LK V LKD + ++ G ++P LA +
Sbjct: 484 LKAVHSYDVIIPAMLEHGIFNLKDNCK------LQPGVPLKPMLAKPTKAITEVLDRFEN 537
Query: 245 KEVVIECKFDGDRIQIH--------------------KNGSEIHYFSRSFLDHSE-YGHA 283
+ E K+DG+R QIH +G FSR+ D S+ Y
Sbjct: 538 QTFTCEYKYDGERAQIHYVSKDSSKQYLGATPAAAKSSDGGLAAIFSRNSEDLSKKYPDI 597
Query: 284 MSKIIEQNVLVDR----CILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYF 339
+ K+ N V +LD E + WDT + F K ++C F
Sbjct: 598 LGKL---NTWVKEDTKSFVLDCETVAWDTVEKKVLPFQQLMTRKKKDVKVEDVKVKVCVF 654
Query: 340 AFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVA 399
AFD+L++ +V+ +SL+ER LL + +P +G + S+
Sbjct: 655 AFDLLFLNGEAVVEKSLRERRALLHEAFQPVEGEFQFAT-----------------SMNG 697
Query: 400 HNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVL 455
+DE++ F ++++ EG+++K L S +EP RS WLK+K +Y+ G LD++
Sbjct: 698 QEIDEIQTFLDDSVKASCEGLMVKMLDGTESGYEPSKRSRNWLKIKKDYLSGIGDSLDLV 757
Query: 456 IIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPY 515
++G YYG G+R FL+A P DTY + C +GTG S++ L+ + +L
Sbjct: 758 VLGAYYGRGKRTSVYGAFLLA-CHNPQTDTYE----TICNIGTGFSEQVLEELYAQLSAI 812
Query: 516 FRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSA-- 569
+ PK FY ++ ++ +PDVW E K+ L+++ + E
Sbjct: 813 V--IDRPK----PFYSHSSGNQHQPDVWFEPRYVWEVKTADLTLSPRYKAGCKEGVDKGG 866
Query: 570 --PYSLRFPRIDRVRYDK 585
SLRFPR ++R DK
Sbjct: 867 ERGISLRFPRFIKIRDDK 884
>gi|347840149|emb|CCD54721.1| hypothetical protein [Botryotinia fuckeliana]
Length = 923
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 205/496 (41%), Gaps = 96/496 (19%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH-------PDAEDLFNVTCD 198
K A E K+I+ + L+LG++EK++ HE P E +
Sbjct: 424 KGGASEAKYIVRFLEGKLRLGLAEKTVLVSLAQAMVCHEIEAKGSGKVPSTEQMAKGESI 483
Query: 199 LKLVCEKLKDRN------------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKE 246
LK V L + ++ G ++P LA + +
Sbjct: 484 LKAVHSSLPSYDVIIPAMLEHGIFNLKDNCKLQPGVPLKPMLAKPTKAITEVLDRFENQT 543
Query: 247 VVIECKFDGDRIQIH--------------------KNGSEIHYFSRSFLDHSE-YGHAMS 285
E K+DG+R QIH +G FSR+ D S+ Y +
Sbjct: 544 FTCEYKYDGERAQIHYVSKDSSKQYLGATPAAAKSSDGGLAAIFSRNSEDLSKKYPDILG 603
Query: 286 KIIEQNVLVDR----CILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAF 341
K+ N V +LD E + WDT + F K ++C FAF
Sbjct: 604 KL---NTWVKEDTKSFVLDCETVAWDTVEKKVLPFQQLMTRKKKDVKVEDVKVKVCVFAF 660
Query: 342 DVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHN 401
D+L++ +V+ +SL+ER LL + +P +G + S+
Sbjct: 661 DLLFLNGEAVVEKSLRERRALLHEAFQPVEGEFQFAT-----------------SMNGQE 703
Query: 402 VDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLII 457
+DE++ F ++++ EG+++K L S +EP RS WLK+K +Y+ G LD++++
Sbjct: 704 IDEIQTFLDDSVKASCEGLMVKMLDGTESGYEPSKRSRNWLKIKKDYLSGIGDSLDLVVL 763
Query: 458 GGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFR 517
G YYG G+R FL+A P DTY + C +GTG S++ L+ + +L
Sbjct: 764 GAYYGRGKRTSVYGAFLLA-CHNPQTDTYE----TICNIGTGFSEQVLEELYAQLSAIV- 817
Query: 518 KYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSA---- 569
+ PK FY ++ ++ +PDVW E K+ L+++ + E
Sbjct: 818 -IDRPK----PFYSHSSGNQHQPDVWFEPRYVWEVKTADLTLSPRYKAGCKEGVDKGGER 872
Query: 570 PYSLRFPRIDRVRYDK 585
SLRFPR ++R DK
Sbjct: 873 GISLRFPRFIKIRDDK 888
>gi|449456160|ref|XP_004145818.1| PREDICTED: DNA ligase 1-like [Cucumis sativus]
Length = 801
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 194/414 (46%), Gaps = 57/414 (13%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHS 278
G + P LA K G E E K+DG+R QIH ++GS + +SR+ ++
Sbjct: 424 GIPIGPMLAKPTKGVSEILNKFQGLEFTCEYKYDGERAQIHYMEDGS-VEIYSRNAERNT 482
Query: 279 ----EYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS-SD 333
+ +S+I + +V ILD E++ +D + F Q ++ AR ++ SD
Sbjct: 483 GKFPDVVLTVSRIKKPSV--RSFILDCELVAYDRGKQKILPF---QILSTRARKNVAVSD 537
Query: 334 --RQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
++C FAFD+LY+ +I + L R ELL NS + G
Sbjct: 538 IKVEVCVFAFDLLYLDGQPLIQRELNVRRELL-------------------YNSFIEESG 578
Query: 392 --EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIR 447
+ +++ ++++E++KF +++ EG+++K L + +EP RS WLKLK +YI
Sbjct: 579 YFQFATAIITNDLEEIQKFLDASVDQSCEGLIIKTLNRDATYEPSKRSHNWLKLKKDYID 638
Query: 448 A-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 506
+ G LD++ I ++G G+R G FL+A D F S C++GTG S+ L+
Sbjct: 639 SIGDSLDLVPIAAFHGRGKRTGVYGAFLLACY-----DNDNEEFQSICKIGTGFSEAMLE 693
Query: 507 AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTI 562
L R P+ P S+Y+ + PDVW E E K+ L+I+ R
Sbjct: 694 ERSASL----RSKVIPE--PKSYYRYGDTI--NPDVWFEPTEVWEVKAADLTISPVHRAG 745
Query: 563 RSEVFS-APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGG 615
V S SLRFPR+ RVR DK + + ++ ++ Q ++ G
Sbjct: 746 VGIVDSDKGISLRFPRLVRVREDKNPEEASSSEQVADMYNAQKHNHQNNQDDNG 799
>gi|74183394|dbj|BAE36577.1| unnamed protein product [Mus musculus]
Length = 699
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 149/604 (24%), Positives = 248/604 (41%), Gaps = 112/604 (18%)
Query: 43 VDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNA 102
V Y S RL P E G+ + VL + A G +S +R KG A
Sbjct: 111 VLYLSLNRLGPPQQGLE---LGVGDGVLLKAVAQATGRQLES---IRAEVAEKGDVGLVA 164
Query: 103 GNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMK 162
N +L ISG T + D+ RL S + A+K+ ++ L E +
Sbjct: 165 ENSRSTQRLMLPPPPLTISGVFT--KFCDIA-RLTGSASMAKKMDIIKGLFVACRHSEAR 221
Query: 163 WIIMIILKDLKLGISEKSIFH------EFHPDAEDLFNVTCD------------------ 198
+I + L+LG++E+S+ P ++ D
Sbjct: 222 YIARSLSGRLRLGLAEQSVLAALAQAVSLTPPGQEFPTAVVDAGKGKTAEARKMWLEEQG 281
Query: 199 ----------------LKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
+ ++ E +R H + + G ++P LA ++
Sbjct: 282 MILKQTFCEVPDLDRIIPVLLEHGLERLPEHCK--LSPGVPLKPMLAHPTRGVSEVLKRF 339
Query: 243 HGKEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHS-EYGHAMSKIIE-QNVLVDRCIL 299
+ E K+DG R QIH G E+ FSR+ D++ +Y +S+I + ++ V IL
Sbjct: 340 EEVDFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKHPSVTSFIL 399
Query: 300 DGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKER 359
D E + WD + F + D Q+C +AFD++Y+ S++ Q L R
Sbjct: 400 DTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVRQPLSRR 459
Query: 360 HELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW--SLVAHNVDEVEKFFKETIENRD 417
+LL++ + V +GE + SL + +++ +F ++++++
Sbjct: 460 RQLLRE-------------------NFVETEGEFVFTTSLDTKDTEQIAEFLEQSVKDSC 500
Query: 418 EGIVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFL 474
EG+++K D+ + +E RS WLKLK +Y+ G LD+++IG Y G G+R G FL
Sbjct: 501 EGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFL 560
Query: 475 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK----PYFRKYEYPKRAPPSFY 530
+A A D + C++G G SDEEL+ L+ P R Y
Sbjct: 561 LA-----AYDEESEELQAICKLGNGFSDEELEEHHQSLQALVLPTPRPY----------- 604
Query: 531 QVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP---------YSLRFPRIDRV 581
V + PD W++ SI+ + ++ S ++ A SLRFPR RV
Sbjct: 605 -VRIDGAVAPDHWLDP---SIVWEVKCADLSL-SPIYPAARGLVDKEKGISLRFPRFIRV 659
Query: 582 RYDK 585
R DK
Sbjct: 660 RKDK 663
>gi|342874818|gb|EGU76737.1| hypothetical protein FOXB_12758 [Fusarium oxysporum Fo5176]
Length = 879
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 130/516 (25%), Positives = 215/516 (41%), Gaps = 92/516 (17%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH-----PDAEDLFNVTCDLK 200
K E K+II + L+LG++E+++ HE P DL LK
Sbjct: 382 KGGPSEAKFIIRFLEGKLRLGLAERTVLVSLAQAIVAHEADAKGKVPSTSDLEKGESILK 441
Query: 201 LVCEKLKDRN------------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVV 248
V +L + + + + G ++P LA + G+
Sbjct: 442 TVYSELPSYDVIIPAMLEHGIMKLRENCKLRPGVPLKPMLAKPTKAITEVLDRFEGQTFT 501
Query: 249 IECKFDGDRIQIH---KNGSE-----------------IHYFSRSFLDHS-EYGHAMSKI 287
E K+DG+R QIH K+ + FSR+ D S +Y ++K+
Sbjct: 502 CEYKYDGERAQIHYVAKDAPQELNEASQGAAKEAAAGVASIFSRNSEDLSRKYPDILAKL 561
Query: 288 ---IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVL 344
++ + +LD E + WD + F K ++C FAFD+L
Sbjct: 562 HTWVKPDT--KSFVLDCETVAWDVDEKKVLPFQQLMTRKKKDVKVEDVKVKVCVFAFDLL 619
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
Y+ +V+ ++L+ER ELL+ P +G + +H+ Q +DE
Sbjct: 620 YLNGEAVVEKALRERRELLETAFNPVEG-------EFSFATHMNGQ----------ELDE 662
Query: 405 VEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 460
++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G Y
Sbjct: 663 IQVFLDESVKASCEGLMVKMLDGTESGYEPSKRSRNWLKIKKDYLSGVGDSLDLVVLGAY 722
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
YG G+R FL+A P +TY + C +GTG S++ L+ + T+L E
Sbjct: 723 YGKGKRTSVYGAFLLACY-NPNSETYE----TVCNIGTGFSEQVLEDLHTQLS------E 771
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP----YS 572
P FY ++ + +PDVW E K+ L+++ + E S
Sbjct: 772 ITIDRPKPFYSHSSGGQHQPDVWFEPRYVWEVKTADLTLSPRYKAGAKEGVDPSGNKGIS 831
Query: 573 LRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 608
LRFPR RVR DK + E+ T+
Sbjct: 832 LRFPRFIRVRDDKKADAATTSRQVAEMYRKQESVTK 867
>gi|449496284|ref|XP_004160093.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1-like [Cucumis sativus]
Length = 801
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 194/414 (46%), Gaps = 57/414 (13%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHS 278
G + P LA K G E E K+DG+R QIH ++GS + +SR+ ++
Sbjct: 424 GIPIGPMLAKPTKGVSEILNKFQGLEFTCEYKYDGERAQIHYMEDGS-VEIYSRNAERNT 482
Query: 279 ----EYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS-SD 333
+ +S+I + +V ILD E++ +D + F Q ++ AR ++ SD
Sbjct: 483 GKFPDVVLTVSRIKKPSV--RSFILDCELVAYDRGKQKILPF---QILSTRARKNVAVSD 537
Query: 334 --RQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQG 391
++C FAFD+LY+ +I + L R ELL NS + G
Sbjct: 538 IKVEVCVFAFDLLYLDGQPLIQRELNVRRELL-------------------YNSFIEESG 578
Query: 392 --EPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIR 447
+ +++ ++++E++KF +++ EG+++K L + +EP RS WLKLK +YI
Sbjct: 579 YFQFATAIITNDLEEIQKFLDASVDQSCEGLIIKTLNRDATYEPSKRSHNWLKLKKDYID 638
Query: 448 A-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELD 506
+ G LD++ I ++G G+R G FL+A D F S C++GTG S+ L+
Sbjct: 639 SIGDSLDLVPIAAFHGRGKRTGVYGAFLLACY-----DNDNEEFQSICKIGTGFSEAMLE 693
Query: 507 AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIRTI 562
L R P+ P S+Y+ + PDVW E E K+ L+I+ R
Sbjct: 694 ERSASL----RSKVIPE--PKSYYRYGDTI--NPDVWFEPTEVWEVKAADLTISPVHRAG 745
Query: 563 RSEVFS-APYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGG 615
V S SLRFPR+ RVR DK + + ++ ++ Q ++ G
Sbjct: 746 VGIVDSDKGISLRFPRLVRVREDKNPEEASSSEQVADMYNAQKHNHQNNQDDNG 799
>gi|302903161|ref|XP_003048798.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729732|gb|EEU43085.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 856
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 210/493 (42%), Gaps = 92/493 (18%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFHPDAEDLFNVTCD------- 198
K E K+II + L+LG++EK++ HE DA+D T D
Sbjct: 359 KGGPSEAKFIIRFLEGKLRLGLAEKTVLVSLAQAIVCHE--ADAKDKVPSTSDIEKGESI 416
Query: 199 LKLVCEKLKDRN------------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKE 246
LK V +L + + + ++ G ++P LA + G+
Sbjct: 417 LKTVYSELPSYDVIIPAILEHGIMKLRENCNLRPGVPLKPMLAKPTKAITEVLDRFEGQT 476
Query: 247 VVIECKFDGDRIQIHKNGSEI-HYFSRSFLDHS-EYGHAMSKIIEQN----------VLV 294
E K+DG+R QIH + S++ + E G ++ I +N +L
Sbjct: 477 FTCEYKYDGERAQIHYVAKDAPQQLSQASQGAAKEVGAGVASIFSRNSEDLSKKYPDILA 536
Query: 295 DRC----------ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVL 344
+LD E + WD + F K ++C FAFD+L
Sbjct: 537 KLSTWVKPDTKSFVLDCETVAWDVDEKKVLPFQQLMTRKKKDVKVEDVKVKVCVFAFDLL 596
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
Y+ +V+ ++L+ER ELL+ P +G + +H+ Q ++E
Sbjct: 597 YLNGEAVVERALRERRELLEAAFIPVEG-------EFAFATHMNGQ----------ELEE 639
Query: 405 VEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 460
++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G Y
Sbjct: 640 IQVFLDESVKASCEGLMVKMLDGRESGYEPSKRSRNWLKIKKDYLSGVGDSLDLVVLGAY 699
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
YG G+R FL+A P DTY + C +GTG S++ L+ + +L E
Sbjct: 700 YGKGKRTSVYGAFLLA-CYNPNSDTYE----TVCNIGTGFSEQVLEDLHKQLS------E 748
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVF----SAPYS 572
P FY ++ + +PDVW E K+ L+++ + E + S
Sbjct: 749 ITIDRPKPFYSHSSGGQHQPDVWFEPRYVWEVKTADLTLSPRYKAGAKEGVDPSGTKGIS 808
Query: 573 LRFPRIDRVRYDK 585
LRFPR R+R DK
Sbjct: 809 LRFPRFIRIRDDK 821
>gi|429190348|ref|YP_007176026.1| ATP-dependent DNA ligase I [Natronobacterium gregoryi SP2]
gi|448326260|ref|ZP_21515627.1| DNA ligase [Natronobacterium gregoryi SP2]
gi|429134566|gb|AFZ71577.1| ATP-dependent DNA ligase I [Natronobacterium gregoryi SP2]
gi|445612917|gb|ELY66634.1| DNA ligase [Natronobacterium gregoryi SP2]
Length = 573
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 223/499 (44%), Gaps = 92/499 (18%)
Query: 118 GMISGGLTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKDLKL 174
G SG LT++E+ D L LA++E KI L L + ++ E +++ ++L ++++
Sbjct: 120 GNGSGALTVREVYDDLVALAAAEGEGSEDRKIDALFGLFNRCSSDEARYLARLVLSEMRI 179
Query: 175 GISEKSI-------FHEFHPDAEDLFNVTCDLKLVCEKLKDRN-QRHKRQDIEVGKAVRP 226
G+ E ++ F E V+ D V +D +EVG+ V+
Sbjct: 180 GVGEGTVRDAIAAAFDIPQEHVERALQVSNDYGEVARVARDEGLDGLDAMALEVGRPVQA 239
Query: 227 QLAMR--IGDAHAAWRKLHGKEVVIECKFDGDRIQIH-------KNGSEIHYFSRSFLDH 277
LA + DA AW +E +E K+DG RIQ+H + FSR+ D
Sbjct: 240 MLAQTGTVTDALEAW-----EEAAVEWKYDGARIQLHYDPDGLEEGDGTTRVFSRNMEDV 294
Query: 278 SEYGHAMSKIIE--QNVLVDRCILDGEMLVWDTSLNR--FAE----FGSNQEIAKAARDG 329
+ A+ +++E + L ILDGE++ D + + F E F ++AKA D
Sbjct: 295 T---AALPEVVEFAEKTLAVPVILDGEVVAVDDAGDPLPFQEVLKRFRRKHDVAKARED- 350
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
+ R +C FD L+ ++ + L RHE RLE ++ G RP
Sbjct: 351 -VAVRPVC---FDCLHADGVDLLEEPLTTRHE-----------RLEVVLTGDG-----RP 390
Query: 390 QGEPCWSLV--AHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIR 447
+ SL+ + DE+E E +E+ EGI+LK+ S + PG R W K KP+
Sbjct: 391 EDVAGLSLLWLTDDPDEIESIDAEALESGHEGIMLKNPESAYSPGRRGKNWRKRKPDV-- 448
Query: 448 AGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDA 507
LD ++ G +G GRR + F +++ + + +V TG++DE+L
Sbjct: 449 --ETLDCVVTGAEWGEGRRATFLGTFELSVRNETTGE-----LETVGKVATGITDEQLAE 501
Query: 508 VVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSIT-SDIRTIRSEV 566
+ L+P+ ++E +V IE +++ + +I++ S
Sbjct: 502 LTELLEPHI------------------ATEEGQEVEIE---PAVVFEVGYEEIQS--SPT 538
Query: 567 FSAPYSLRFPRIDRVRYDK 585
+S+ Y+LRFPR VR DK
Sbjct: 539 YSSGYALRFPRFQAVRDDK 557
>gi|291415245|ref|XP_002723865.1| PREDICTED: DNA ligase (ATP) 1, partial [Oryctolagus cuniculus]
Length = 757
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 128/506 (25%), Positives = 215/506 (42%), Gaps = 87/506 (17%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + +K+ ++ L E ++I + L+LG++E+S+
Sbjct: 249 IARLTGSASMTKKMDIIKGLFVACRHSEARFIARALRGRLRLGLAEQSVLTALTQAVSLT 308
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
F P D L C+ + ++ E +R
Sbjct: 309 PPGQAFPPAVVDAGKGKTAEARKTWLEEQGMVLKQTFCEVPDLDRIIPVLLEHGLERLPE 368
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G +RP LA ++ E K+DG R QIH G E+ FS
Sbjct: 369 HCK--LSPGTPLRPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFS 426
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 427 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKDVDP 486
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 487 SEIQVQVCLYAFDLIYLNGQSLVREPLSRRRQLLRE-------------------NFVET 527
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +++++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 528 EGEFLFATSLDTKDLEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 587
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + DT + C++GTG SDEE
Sbjct: 588 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLACYDE---DT--EGLQAICKLGTGFSDEE 642
Query: 505 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIR 560
L+ L+ AP + Q PD W++ K LS++
Sbjct: 643 LEEQHQSLQALVLP------APRPYVQAGGAVA--PDHWLDPTTVWEVKCADLSLSPIYP 694
Query: 561 TIRSEV-FSAPYSLRFPRIDRVRYDK 585
R V SLRFPR RVR DK
Sbjct: 695 AARGLVDKEKGISLRFPRFVRVRKDK 720
>gi|169806130|ref|XP_001827810.1| ATP-dependent DNA ligase [Enterocytozoon bieneusi H348]
gi|161779258|gb|EDQ31281.1| ATP-dependent DNA ligase [Enterocytozoon bieneusi H348]
Length = 628
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 135/531 (25%), Positives = 234/531 (44%), Gaps = 116/531 (21%)
Query: 124 LTIKELNDLLDRL---ASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LTI ++ +L +L +++ EK ++ +I+ + E K+II ++ LK+G++ ++
Sbjct: 122 LTIHDVYNLCTKLCVITGTKSNVEKRKIILEVIRDASPLESKYIIRLLEGKLKIGLALQT 181
Query: 181 IF--------HEFHPDAEDLFNVTCDLKLVCEKLK-----DRNQRHKRQDIEVGKAVRPQ 227
I + + ++ +N D K + EK+ + ++ IE G ++P
Sbjct: 182 ILISLSMALGYSDYNIIKEAYNKRPDFKYLVEKIIVAKSIGKTLKNLIIKIEPGIPLKPM 241
Query: 228 LAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-------------------------- 261
LA I + +A K + V+ E K+DG+R QIH
Sbjct: 242 LATPITNLDSAISKFNN--VLAEYKYDGERAQIHSYLFKRQLSFKNLTGSTTTIERFFEQ 299
Query: 262 ----------KNGS---EIHY---FSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLV 305
+N S ++ Y FSR+ D SE + + +I + N ILDGE++
Sbjct: 300 KTNDGIVNVNQNTSVTGKVCYNKIFSRNNEDISEKYNDLVQI-KFNKNNKSYILDGEIVA 358
Query: 306 WDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQK 365
++ F + + + + + +CYFAFD++Y +I L++R +LL
Sbjct: 359 YENG--NIMPFQTLSTRKRKYNEKI--EVPVCYFAFDLIYFDGKELIDMPLEDRRKLL-- 412
Query: 366 VVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL 425
H + + E + N ++ +FF+ NR EG+++KDL
Sbjct: 413 ---------------HANFTTIPNVFEFAIGKIIDNNKDMNEFFEAASTNRCEGLMIKDL 457
Query: 426 GSKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPD 484
G+ ++P RS +WLKLK +Y+ G D+++IG Y+G G+R G FL+ +
Sbjct: 458 GALYQPSHRSNQWLKLKKDYLDNLGDSFDLVVIGAYFGKGKRTGMYGGFLLGVYNDET-- 515
Query: 485 TYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNN-SKERPDVW 543
F + C++GTG SD+ L + +L+P Q TN K+RPD++
Sbjct: 516 ---NTFEACCKIGTGFSDDYLMKIYKELEP--------------IQQHTNILVKDRPDIF 558
Query: 544 I------ESPEKSIILS---ITSDIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
+ E S+ LS I TI ++ SLRFPR R R DK
Sbjct: 559 VIPRFVWEIKAASLTLSPIYIAGSTDTISNK----GISLRFPRFIRERLDK 605
>gi|385305950|gb|EIF49892.1| dna ligase [Dekkera bruxellensis AWRI1499]
Length = 714
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 132/530 (24%), Positives = 233/530 (43%), Gaps = 113/530 (21%)
Query: 124 LTIKELNDLLDRLASS---ENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
L+I E+ L ++A S ++++KI++++ ++ QE K+++ + L++ EKS
Sbjct: 235 LSIPEVFQNLTKIAKSMGNSSQSKKIAIINKMLAACEDQEAKFLMRSLEGKLRINFGEKS 294
Query: 181 I-------FHEFH----------PDA--------EDLFNVTCDLKLVCEKLKDRNQRHKR 215
+ F E+ P+A ++ ++ T + +L+ + H
Sbjct: 295 VLMGLAKAFVEYETGEKSSDDVDPEALVKAEQQMKEAYSETPNYELIIKNCIKYGVSHVS 354
Query: 216 Q--DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH-KNGSEIHYFSR 272
+ ++ G V+P LA + GKE E K+DG+R Q+H ++ +SR
Sbjct: 355 EHCTLKPGIPVKPMLARPTKSIAEIMDTMEGKEFTCEYKYDGERAQVHLLPDGDMRVYSR 414
Query: 273 SFLDHSEYGHAMSKIIE----QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARD 328
+ + +E + +IE +N + ILD E + WDT ++ F Q ++ R
Sbjct: 415 NSENMTERYPDLIPVIEELRKENPEIKSLILDSECVAWDTEEHKILPF---QTLSTRKRK 471
Query: 329 GLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVK--PSKGRLETLVPDHGL 383
G+ ++C F FD+L+ +I++ L +R ELL K + P K R T
Sbjct: 472 GVQEKDIKVKVCLFVFDLLFYNGEPIINKPLDQRRELLFKHIHEVPEKLRFAT------- 524
Query: 384 NSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSK---WEPGDRSGKWLK 440
+ + +V E+EKF E++ + EG+++K L + + P RS WLK
Sbjct: 525 ------------KMNSTDVKEMEKFLDESVHDSCEGLMIKALHGEDACYRPAKRSKNWLK 572
Query: 441 LKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 499
LK +Y+ G LD+++I GE + S C++GTG
Sbjct: 573 LKKDYLEGVGDSLDLVVID--------TGE--------------------YESVCKIGTG 604
Query: 500 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVT-NNSKERPDVWIESPEKSIILSI-TS 557
S++ L + +LKP ++ PK SF+ N PDVW E S++ + +
Sbjct: 605 FSEDLLMDLAKQLKP--KEISEPK----SFFVYNRENPNATPDVWFEP---SLVFEVRVA 655
Query: 558 DIRTIRSEVFSAPY--------SLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
D+ T + A Y SLRFPR ++R DK D + VE+
Sbjct: 656 DLTTSPIYMSGASYFGDGEKGISLRFPRFVQIRTDKGIEDATSSEQIVEM 705
>gi|356927698|gb|AET42488.1| DNA ligase [Emiliania huxleyi virus 202]
Length = 622
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 172/404 (42%), Gaps = 47/404 (11%)
Query: 214 KRQDIEVGKAVRPQLAMRI-GDAHAAWRKLHGKEVVIECKFDGDRIQIH-KNGSEIHYFS 271
KR I+ G V+P LA G R L + K+DG R QIH K I FS
Sbjct: 246 KRSFIKPGVPVKPMLAKPTNGVTEVMDRMLKSGRFTCDFKYDGMRAQIHMKEDGTISVFS 305
Query: 272 RSFLDHSEYGHAMSKIIEQNVLVD--RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ + + II + + I+D E + D N Q ++ R
Sbjct: 306 RNMESMTTSYPDVVNIIPSTLSPNTKSFIIDTEAVAVDVDGNILP----FQILSTRKRKD 361
Query: 330 LSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSH 386
SD ++C +AFD+LY S + +L +R ++L P+ + + +
Sbjct: 362 AESDEIKVKVCIYAFDILYYNGESTLKNTLSQRRDILYNAFVPTGHQFK-------FATS 414
Query: 387 VRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPE 444
+ P E +EV + ++ + EG+++K L S +EP RS WLKLK +
Sbjct: 415 MDPSTE----------EEVADMLNQAVQAKTEGLMVKSLDDNSSYEPSKRSLNWLKLKKD 464
Query: 445 YIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDE 503
Y+ G D++ I GY+G G+R G +L+A+ D Y F S C++GTG SDE
Sbjct: 465 YLAGMGDSCDLVPIAGYHGRGKRTGVYGAYLLAVY-----DPYEEVFQSVCKIGTGFSDE 519
Query: 504 ELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIR 563
+L + L P+ + P+ Y V +PDVW + +LS I +
Sbjct: 520 DLIQLSDSLNPHRVDQK------PNDYCVAETPSLKPDVWFIPTQVWEVLSADLSISPVH 573
Query: 564 SEVF-----SAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
S +LRFPR RVR DK D V++ S
Sbjct: 574 MAGHGIVDPSKGIALRFPRFIRVRKDKNITDATTNTMIVDMYQS 617
>gi|435851818|ref|YP_007313404.1| ATP-dependent DNA ligase I [Methanomethylovorans hollandica DSM
15978]
gi|433662448|gb|AGB49874.1| ATP-dependent DNA ligase I [Methanomethylovorans hollandica DSM
15978]
Length = 561
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 144/558 (25%), Positives = 241/558 (43%), Gaps = 102/558 (18%)
Query: 64 GLKESVLANCLIDALGMS-KDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISG 122
GL +L N L + G+ K+ D VR G+ +VL G IS
Sbjct: 60 GLGTGILLNALSKSSGLPVKEIEDVVR-----------ETGDIGKTTVKVL----GKISK 104
Query: 123 G-------------LTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIM 166
G L+I E+ + +A + + +I L L +A+++ +I
Sbjct: 105 GQATFSSFLDSPVELSIMEVYERFKDIAHATGKGSQTSRIKHLQYLFNSASAEDVGYIAR 164
Query: 167 IILKDLKLGISEKSI-------FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRHKRQ-DI 218
+ ++D+++G+ E + F E F +T D+ +V K+ + +
Sbjct: 165 LAIEDMRIGVGEGIVRDAIAKAFEVPVASVERGFMLTNDMGIVAVTAKEGGDEALLELGL 224
Query: 219 EVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS 278
++G+ ++ LA D A R+L V E KFDG R+QIHK G E+ +SR + +
Sbjct: 225 QIGRPIKLMLAQVTPDIETAIREL--GVVAAEWKFDGARVQIHKKGDEVILYSRRLENIT 282
Query: 279 EYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR---DGLSSDRQ 335
+ +++ V D ILDGE + D + R F QEI K R D + R
Sbjct: 283 GSLPDIVSSVKRAVKADSAILDGEAVAIDEN-GRPKPF---QEILKRLRRKHDVQNKVRH 338
Query: 336 --LCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEP 393
L FD++Y+ S+I L++R E L V+ + VR +
Sbjct: 339 IPLILNLFDIMYLDGESLIELPLQKRREFLVASVEN--------------DDLVRVDSQ- 383
Query: 394 CWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLD 453
L+ ++ ++E +++ + EGI++K+ S + PG R WLK KP LD
Sbjct: 384 ---LITSDLSQIENMYEQALSAGHEGIMIKNPASPYSPGKRGKNWLKKKP----VMETLD 436
Query: 454 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 513
+++IG +G GRR + + +A + PDT +F+ +V TG+SDE+L +L
Sbjct: 437 LVVIGAEWGYGRRTSFLGSYALACHD---PDT--GQFLPVGKVATGISDEQL----AELT 487
Query: 514 PYFRKYEYPKRAPPSFYQVTNNSKE-RPDVWIESPEKSIILSITSDIRTIRSEVFSAPYS 572
FR++ + S E RP + E + I +S + + Y+
Sbjct: 488 EMFREH---------VISGSGTSVEIRPHILFEVAFEEI----------QKSTNYESGYA 528
Query: 573 LRFPRIDRVRYDKPWHDC 590
LRFPR+ RVR DK +
Sbjct: 529 LRFPRLVRVRDDKSLEEV 546
>gi|354611440|ref|ZP_09029396.1| DNA ligase [Halobacterium sp. DL1]
gi|353196260|gb|EHB61762.1| DNA ligase [Halobacterium sp. DL1]
Length = 555
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 128/486 (26%), Positives = 218/486 (44%), Gaps = 83/486 (17%)
Query: 121 SGG--LTIKELNDLLDRLASSE---NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLG 175
SGG LT+ + L+ LA++E ++ EK+++L L + +++E +++ ++L ++++G
Sbjct: 113 SGGDDLTVTAVFTELEALAAAEGDGSQDEKVTLLFGLFNRCSSEEARYLARLVLGEMRIG 172
Query: 176 ISEKSIFHEFHPDAEDL--------FNVTCDLKLVCEKLKDRNQRH-KRQDIEVGKAVRP 226
+ E ++ A DL V+ D LV E +D + +EVG+ V+
Sbjct: 173 VGEGTVRDAIAA-AFDLPVDAVKRALQVSNDYGLVAETARDDGESGLDAMHLEVGRPVQA 231
Query: 227 QLAM--RIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAM 284
LA + DA W E +E KFDG R+Q+H +G + +SR+ D +
Sbjct: 232 MLAQAGTVTDALEEW-----AEAAVETKFDGARLQVHWDGENVSLYSRNMEDVT-AALPE 285
Query: 285 SKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAR-----DGLSSDRQLCYF 339
+ + ILDGE + + QEI K R + + + ++
Sbjct: 286 VVEFVEEHVEAPVILDGEAVAVSADGDPL----PFQEILKRFRRKHDVEAMRQEVRVELN 341
Query: 340 AFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVA 399
AFD L+ G ++ ER+E RLE +V D S + LV
Sbjct: 342 AFDCLHAGGDDLLEAPFLERYE-----------RLEAVVGDESAVSEL---------LVT 381
Query: 400 HNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGG 459
+ DE+ F + +++ EGI+LKD + + PGDR WLK KP+ LD+++ G
Sbjct: 382 DDPDEIAAFEERALDSGHEGIMLKDPDAAYTPGDRGKHWLKRKPDV----ETLDLVVTGA 437
Query: 460 YYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKY 519
+G GRR + FL++ A D F + +V TG++DEEL + L+P+ R
Sbjct: 438 EWGEGRRASFLGTFLLS-----ARDEDDDAFETIGKVATGITDEELAELTELLEPHIRA- 491
Query: 520 EYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRID 579
+ D+ E +++ + + S +S+ Y+LRFPR
Sbjct: 492 ---------------EDGQAVDI-----EPAVVFEVGYE-EIQESPTYSSGYALRFPRFV 530
Query: 580 RVRYDK 585
VR DK
Sbjct: 531 TVREDK 536
>gi|410054237|ref|XP_001170212.3| PREDICTED: DNA ligase 1 isoform 4 [Pan troglodytes]
Length = 936
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 140/565 (24%), Positives = 230/565 (40%), Gaps = 119/565 (21%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RL S + A+KI ++ L E ++I + L+LG++E+S+
Sbjct: 411 IARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLT 470
Query: 183 ---HEFHPDAED--------------------LFNVTCD-------LKLVCEKLKDRNQR 212
EF P D L C+ + ++ E +R
Sbjct: 471 PPGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPE 530
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H + + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 531 HCK--LSPGIPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFS 588
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 589 RNQEDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 648
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 649 SEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRE-------------------NFVET 689
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL +V+++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 690 EGEFVFATSLDTKDVEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 749
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G LD+++IG Y G G+R G FL+A + D + C++GTG SDEE
Sbjct: 750 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA-----SYDEDSEELQAICKLGTGFSDEE 804
Query: 505 LDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIR 560
LD LK P R Y V + PD W++ S + +
Sbjct: 805 LDEHHQSLKALVLPSPRPY------------VRIDGAVIPDHWLDP---SAVWEVKCADL 849
Query: 561 TIRSEV----------------FSAPY---------SLRFPRIDRVRYDK-PWHDCLDVQ 594
+ +S V S P SLRFPR RVR DK P Q
Sbjct: 850 SKQSRVEEGGDCTGGRWGWTAGVSIPLLQVDSDKGISLRFPRFIRVREDKQPEQATTSAQ 909
Query: 595 SFVELVHSSNGTTQKGKEYGGLQDD 619
S Q+G++ G +D
Sbjct: 910 VACLYRKQSQIQNQQGEDSGSDPED 934
>gi|14423666|sp|Q9JHY8.1|DNLI1_RAT RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|9050023|gb|AAF82585.1|AF276774_1 DNA ligase I [Rattus norvegicus]
Length = 918
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 152/601 (25%), Positives = 250/601 (41%), Gaps = 106/601 (17%)
Query: 43 VDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNA 102
V Y S RL P E G+ + VL + A G +S +R KG A
Sbjct: 330 VLYLSLNRLGPPQQGLE---LGVGDGVLLKAVAQATGRQLES---IRAEVAEKGDVGLVA 383
Query: 103 GNFPMVAAEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMK 162
N +L +SG T + D+ RL S + A+K+ ++ L E +
Sbjct: 384 ENSRSTQRLMLPSPPLTVSGVFT--KFCDIA-RLTGSASMAKKMDIIKGLFVACRYSEAR 440
Query: 163 WIIMIILKDLKLGISEKSIFH------EFHPDAEDLFNVTCD------------------ 198
+I + L+LG++E+S+ P ++ V D
Sbjct: 441 FIARSLSGRLRLGLAEQSVLAALAQAGSLTPPGQEFPTVVVDAGKGKTAEARKMWLEEQG 500
Query: 199 --LKLVCEKLKDRNQ------RHKRQDI------EVGKAVRPQLAMRIGDAHAAWRKLHG 244
LK ++ D ++ H + + G ++P LA ++
Sbjct: 501 MILKQTFCEVPDLDRIIPVLLEHGLESLPEHCKLSPGVPLKPMLAHPTRGVREVLKRFEE 560
Query: 245 KEVVIECKFDGDRIQIHK-NGSEIHYFSRSFLDHS-EYGHAMSKIIE-QNVLVDRCILDG 301
+ E K+ G R QIH G E+ FSR+ D+S +Y +S+I + ++ V ILD
Sbjct: 561 VDFTCEYKYYGQRAQIHVLEGGEVKIFSRNQEDNSGKYPDIISRIPKIKHPSVTSFILDT 620
Query: 302 EMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHE 361
E + WD + F + D Q+C +AFD++Y+ S+ Q L R +
Sbjct: 621 EAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLARQPLSRRRQ 680
Query: 362 LLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW--SLVAHNVDEVEKFFKETIENRDEG 419
LL++ + V +GE + SL +++++ +F ++++++ EG
Sbjct: 681 LLRE-------------------NFVETEGEFVFATSLDTKDIEQIAEFLEQSVKDSCEG 721
Query: 420 IVLK--DLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVA 476
+++K D+ + +E RS WLKLK +Y+ G LD+++IG Y G G+R G FL+A
Sbjct: 722 LMVKTLDVDATYEIAKRSHNWLKLKKDYLEGVGDTLDLVVIGAYLGRGKRPGRYGGFLLA 781
Query: 477 LAERPAPDTYPRRFISFCRVGTGLSDEELDA----VVTKLKPYFRKYEYPKRAPPSFYQV 532
A D + C++GTG SDEEL+ + L P R Y V
Sbjct: 782 -----AYDEESEELAAICKLGTGFSDEELEEHHQNMQALLLPTPRPY------------V 824
Query: 533 TNNSKERPDVWIESPEKSII-------LSITSDIRTIRSEVFSAP-YSLRFPRIDRVRYD 584
+ P+ W++ SI+ L+++ R R V SLRFPR RVR D
Sbjct: 825 RIDGAVAPNHWLDP---SIVWEVKCADLTLSPIYRAARGMVDKEKGISLRFPRFIRVRED 881
Query: 585 K 585
K
Sbjct: 882 K 882
>gi|355570832|ref|ZP_09042102.1| DNA ligase [Methanolinea tarda NOBI-1]
gi|354826114|gb|EHF10330.1| DNA ligase [Methanolinea tarda NOBI-1]
Length = 566
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 127/499 (25%), Positives = 217/499 (43%), Gaps = 90/499 (18%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS----IFHEFHPD 188
+ RL ++ EK+S++ L + + E K++ +IL+DL++G+ E + I F D
Sbjct: 139 ISRLEGRSSQVEKLSLVQNLFQNASPLEAKYLARLILEDLRIGVGEGTMRDAIAQAFSVD 198
Query: 189 ---AEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGK 245
E + DL V L+ R R D+ + + P M +
Sbjct: 199 PSLVEHAYQAINDLGEVA--LRARKGRDSLADVHI-RLFHPVKMMLAQQGSISQAIAENG 255
Query: 246 EVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE--QNVLVDRCILDGEM 303
+ E K+DG R Q HK G+ +SR D +E A+ +++E +N ILDGE+
Sbjct: 256 AMAAEYKYDGSRFQFHKQGNRCRMYSRKLEDVTE---ALPEVVETLKNATSHDVILDGEV 312
Query: 304 LV--------WDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVLYVGDTSVIHQS 355
+ + T L RF +IA + + ++ F FD+L++ ++I
Sbjct: 313 IAIKDGRPLPFQTVLRRFRR---KYDIA-----AMQKEIRMQPFVFDILFLDGKTLIDDP 364
Query: 356 LKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN 415
L+ER + L+ ++ V PQ V+ ++ +E ++E+++
Sbjct: 365 LRERRKYLEA----------------AMSGCVAPQ------TVSSDISVIEAVYRESLDA 402
Query: 416 RDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFL 474
EG++LK L S + PG R WLK+KP G D +D+ +IG +G G+R FL
Sbjct: 403 GHEGLMLKVLSSSYTPGIRGKNWLKIKP-----GVDSIDLAVIGAEWGEGKRAHLFGSFL 457
Query: 475 VALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTN 534
+A +R + +V TG +DEEL V LK ++
Sbjct: 458 LACQDRG-------ELLPVGKVATGFTDEELQEVYELLKDRV---------------ISE 495
Query: 535 NSKERPDVWIESPEKSIILSIT-SDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDV 593
+ KE V +E ++ + S+I+ +S + + ++LRFPR RVR DK D +
Sbjct: 496 SGKE---VHLEP---FLVFEVGYSEIQ--KSPNYESGFALRFPRFIRVRDDKGISDIETL 547
Query: 594 QSFVELVHSSNGTTQKGKE 612
S E + + G E
Sbjct: 548 DSIRERFQRQSVQGKPGGE 566
>gi|297849114|ref|XP_002892438.1| ATLIG1 [Arabidopsis lyrata subsp. lyrata]
gi|297338280|gb|EFH68697.1| ATLIG1 [Arabidopsis lyrata subsp. lyrata]
Length = 793
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 186/405 (45%), Gaps = 51/405 (12%)
Query: 214 KRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGS-EIHYF 270
K + +G + P LA K E K+DG+R QIH ++G+ EI+
Sbjct: 409 KTCNFTLGVPIGPMLAKPTKGVAEILNKFQDIVFTCEYKYDGERAQIHFLEDGTFEIYSR 468
Query: 271 S--RSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARD 328
+ R+ + + A+S++ + +V ILD E++ +D + F Q ++ AR
Sbjct: 469 NAERNTGKYPDVALALSRLKKPSV--KSFILDCEVVAFDREKKKILPF---QILSTRARK 523
Query: 329 GLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNS 385
++ + +C FAFD+LY+ +I ++L R E L + + G +
Sbjct: 524 NVNVNDIKVGVCIFAFDMLYLNGQQLIQENLNIRREKLYESFEEDPGYFQF--------- 574
Query: 386 HVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGS--KWEPGDRSGKWLKLKP 443
+L + ++DE++KF +++ EG+++K L S +EP RS WLKLK
Sbjct: 575 --------ATALTSSDIDEIQKFLDASVDVGCEGLIIKTLNSDATYEPAKRSNNWLKLKK 626
Query: 444 EYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSD 502
+Y+ + G +D++ I ++G G+R G FL+A D F S C++GTG SD
Sbjct: 627 DYMDSIGDSMDLVPIAAFHGRGKRTGVYGAFLLACY-----DVDKEEFQSICKIGTGFSD 681
Query: 503 EELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSD 558
LD + L+ P +Y+V ++ PDVW E E K+ L+I+
Sbjct: 682 AMLDERSSSLRSQVIA------TPKQYYRVGDSL--NPDVWFEPTEVWEVKAADLTISPV 733
Query: 559 IRTIRSEV-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
R V SLRFPR+ RVR DK D + ++ +
Sbjct: 734 HRAATGIVDPDKGISLRFPRLLRVREDKKPEDATSSEQIADMYQA 778
>gi|320590780|gb|EFX03223.1| DNA ligase [Grosmannia clavigera kw1407]
Length = 872
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 125/509 (24%), Positives = 205/509 (40%), Gaps = 94/509 (18%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF--------------------HEFHPDAEDLFN 194
K A E K+++ + L+LG++EK++ E A +L
Sbjct: 373 KGGASEAKYLVRFLEGKLRLGLAEKTVLVSLAQAVMHHEAQTAGRADGKETQASASELEQ 432
Query: 195 VTCDLKLVCEKLKDRN------------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKL 242
LK V +L + Q K + G ++P LA +
Sbjct: 433 AEAMLKTVYSELPSYDIIVPAMLEHGIMQLRKHCQLRPGIPLKPMLAKPTKAITEVLDRF 492
Query: 243 HGKEVVIECKFDGDRIQIHKNGSEIH--------YFSRSFLDHSE-YGHAMSKIIE-QNV 292
+ E K+DG+R QIH ++ FSR+ D S+ Y ++K+
Sbjct: 493 ENQTFTCEYKYDGERAQIHYVAADAATGTDGLSAIFSRNSEDLSKKYPDILAKLATWVRP 552
Query: 293 LVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVLYVGDTS 350
+LD E + WD + F Q + + +D +D ++ C FAFD+LY+ +
Sbjct: 553 GTTSFVLDCETVGWDVEERKVLPF--QQLMTRKRKDVKIADVKVRVCVFAFDLLYLNGAA 610
Query: 351 VIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFK 410
++ + L+ER E L V P +G L S+ +DE++ F
Sbjct: 611 LVERPLRERREQLASAVLPVEGELAF-----------------ASSMDGRELDEIQTFLD 653
Query: 411 ETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRR 466
E++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G Y+G G+R
Sbjct: 654 ESVRASCEGLMVKMLDGPESAYEPSKRSRNWLKIKKDYLAGVGDSLDLVVLGAYFGRGKR 713
Query: 467 GGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAP 526
FL+A A F + C +GTG S+ LD + +L + PK
Sbjct: 714 TSVYGAFLLACYSPSA-----EAFETICNIGTGFSEAVLDELHGQLSAIV--IDRPK--- 763
Query: 527 PSFYQVTNNSKERPDVWIE--------------SP--EKSIILSITSDIRTIRSEVFSAP 570
FY + + +PDVW E SP + + + + +
Sbjct: 764 -PFYAHSAGGQHQPDVWFEPRYVWEVRTADLTLSPRYQAACHEGVDPSADSAQPGATGRG 822
Query: 571 YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
SLRFPR RVR DK + + E+
Sbjct: 823 VSLRFPRFIRVRDDKKPDEATTSRQVAEM 851
>gi|440639060|gb|ELR08979.1| hypothetical protein GMDG_00597 [Geomyces destructans 20631-21]
Length = 930
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 128/552 (23%), Positives = 229/552 (41%), Gaps = 99/552 (17%)
Query: 113 LQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDL 172
L R M G ++++ + L+++++ K+ + K E K+I+ + L
Sbjct: 394 LLRIAVMQGNGAQTRKVDGIKKLLSAADSEGGKVDLAK---DKGGPSEAKFIVRFLEGKL 450
Query: 173 KLGISEKSIF---------HEFH-------PDAEDLFNVTCDLKLVCEKLKDRN------ 210
+LG++EK++ HE P + L LK V +L +
Sbjct: 451 RLGLAEKTVLVSLAQAMVCHETESKGRDKVPSTDQLAKGEQVLKAVYSELPSYDVIIPAM 510
Query: 211 ------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--K 262
+ ++ G ++P LA + G+ E K+DG+R QIH
Sbjct: 511 VQHGIFNLRENCKLQPGVPLKPMLAKPTKAITEVLDRFEGQTFTCEYKYDGERAQIHYVS 570
Query: 263 NGSEIHYFSRSFLDHSEYGHAMSKIIEQNV---------LVDRC-----------ILDGE 302
SE Y S ++ I +N ++++ +LD E
Sbjct: 571 KDSETKYQSSVPAAAKGTAGGLAAIFSRNSEDLSKKYPDILEKLGTWVKPETKSFVLDCE 630
Query: 303 MLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVLYVGDTSVIHQSLKERH 360
+ WD + F Q + + +D + D ++ C FAFD+L++ +++ + L+ER
Sbjct: 631 TVAWDMVEKKVMPF--QQLMTRKKKDVKTEDVKVKVCVFAFDLLFLNGEAIVGKPLRERR 688
Query: 361 ELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGI 420
LL P +G S+ +DE++ F ++++ EG+
Sbjct: 689 SLLHTAFTPVEGEFAF-----------------ATSMNGQEIDEIQTFLDDSVKASCEGL 731
Query: 421 VLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVA 476
++K L S +EP RS WLK+K +Y+ G LD++++G Y+G G+R FL+A
Sbjct: 732 MVKMLDGVESGYEPSKRSRNWLKIKKDYLAGIGDSLDLVVLGAYHGKGKRTSVYGAFLLA 791
Query: 477 LAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNS 536
P T R+ + C +GTG S+E L+ + +L + PK FY+ + +
Sbjct: 792 CYN---PST--ERYETVCNIGTGFSEEVLETLHAQLADTV--IDRPK----PFYEHSKVN 840
Query: 537 KERPDVWIES----PEKSIILSITSDIRTIRSEVFSAP-----YSLRFPRIDRVRYDKPW 587
+PDVW E ++ L+++ R E AP SLRFPR ++R DK
Sbjct: 841 AHQPDVWFEPRFVWEVRTADLTLSPKYRAGYKEGI-APNAEKGVSLRFPRFIKIRDDKKV 899
Query: 588 HDCLDVQSFVEL 599
+ + E+
Sbjct: 900 DEATTSRQIAEM 911
>gi|356541453|ref|XP_003539190.1| PREDICTED: DNA ligase 1-like [Glycine max]
Length = 701
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 151/610 (24%), Positives = 258/610 (42%), Gaps = 126/610 (20%)
Query: 43 VDYFSALRLILPSLDRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGG----- 97
V Y SA R I P+ E G+ E+ + L +A G + +A ++K G
Sbjct: 152 VVYLSANR-IAPA--HEGVELGIGEASITKALAEAYGTN----EAWIKTQYQKKGDLGLV 204
Query: 98 AAPNAGNFPMVA---AEVLQRRQGMISGGLTIKELNDLLDRLASSENRAEKISVLSTLIK 154
A + + PM+ EVL R+ + L KE E++ +K + + L+
Sbjct: 205 AKESRSSQPMIMMFKPEVLTIRKVFNTFRLIAKEYG--------KESQEKKKNHMKALLV 256
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKS---------IFHEFH----PDAEDLFNVTCDL-K 200
E +++I ++ L++G +EK+ ++ E H PD + ++ K
Sbjct: 257 SATDCEPQYLIRLLQSKLRIGYAEKTLLAALGQAAVYTEEHSKPPPDIQSPLEEASNIVK 316
Query: 201 LVCEKLKDRNQ------------RHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVV 248
V L D ++ K+ + G + P L+ K E
Sbjct: 317 QVYSVLPDYDKIISALLTEGLWMLPKKCNFTPGVPIGPMLSKATKGVSEILNKFQDVEFT 376
Query: 249 IECKFDGDRIQIH--KNGSEIHYFSRSFLDHSEYG--------HAMSKIIEQNVLVDRCI 298
E K+DG+R QIH +NGS + +SR H+E A+S++ + V I
Sbjct: 377 CEYKYDGERAQIHYLENGS-VEIYSR----HAERNTGKFPDVVAAVSRL--KKPTVSSLI 429
Query: 299 LDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLCYFAFDVLYVGDTSVIHQS 355
LD E++ +D F Q ++ AR + + +C FAFD+LY+ +++ ++
Sbjct: 430 LDCEIVAYDRQTQTIHSF---QALSTRARKNVEMEDIKVDVCIFAFDLLYLNGQALLQEN 486
Query: 356 LKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIEN 415
L+ R E L + G L+ ++ +++V+E++KF + +
Sbjct: 487 LRVRREHLYASFEEEPGFLQFAT-----------------TITSNDVEEIQKFLDQAVGA 529
Query: 416 RDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQ 472
EG+++K L + +EP RS WLKLK +Y+ G LD++ I ++G G+R G
Sbjct: 530 SCEGLIIKTLNEDATYEPLKRSLNWLKLKKDYMDNIGDSLDLVPIAAFHGRGKRTGVYGA 589
Query: 473 FLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQV 532
FL+A D+ F S C++GTG S +AV+ + R PK P ++Y+
Sbjct: 590 FLLACY-----DSDNEEFQSICKIGTGFS----EAVLEERSSSLRSKVIPK--PKAYYRF 638
Query: 533 TNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLD 592
+ PDVW E+ E SLRFPR+ RVR DK
Sbjct: 639 GESI--NPDVWFEASEG---------------------ISLRFPRLLRVRPDKSPEQASS 675
Query: 593 VQSFVELVHS 602
+ E+ ++
Sbjct: 676 SEQVAEMYNA 685
>gi|326469593|gb|EGD93602.1| DNA ligase [Trichophyton tonsurans CBS 112818]
Length = 859
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 135/529 (25%), Positives = 219/529 (41%), Gaps = 98/529 (18%)
Query: 157 NAQEMKWIIMIILKDLKLGISEKSIF---------HEFH-----PDAEDLFNVTCD-LKL 201
A E K+I+ + L+LG++E+++ HE P + D D LK
Sbjct: 360 GASEAKFIVRFLEGKLRLGLAERTVLVALAHAMVAHEAEMDGGKPPSTDQLGKGEDILKT 419
Query: 202 VCEKLKDRNQ------RH------KRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVI 249
V +L +H ++ G ++P LA + GK
Sbjct: 420 VYSELPSYEVIIPAMLKHGIFNLPDNCKLQPGVPLKPMLAKPTKSISEVLDRFEGKHFTC 479
Query: 250 ECKFDGDRIQIH------------------KNGSEI-HYFSRSFLDHSEYGHAMSKIIEQ 290
E K+DG+R QIH K+G + FSR+ D S+ + + +E
Sbjct: 480 EYKYDGERAQIHYISRDTIKEYPAASTTLQKDGEGLCAVFSRNSEDLSKKYPDILEKLEA 539
Query: 291 NVL--VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSD--RQLCYFAFDVLYV 346
V ++D E + WDT + F Q + + +D S D ++C FAFD+L++
Sbjct: 540 WVKPGTQSFVVDCETVAWDTVNKKVLPF--QQLMTRKRKDVKSEDIKVKVCVFAFDLLFL 597
Query: 347 GDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVE 406
+ ++L+ER LL P +G E HG S +++E++
Sbjct: 598 NGEPTVKKTLRERRALLHDAFVPVEG--EFAFAQHGNTS---------------DLEEIQ 640
Query: 407 KFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYG 462
E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G Y+G
Sbjct: 641 TMLDESVKASCEGLMVKMLDTEDSGYEPSKRSRNWLKVKKDYLAGIGDSLDLVVLGAYFG 700
Query: 463 SGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYP 522
G+R FL+A A P Y + C +GTG S+ L+ + L P
Sbjct: 701 RGKRTSVYGAFLLA-AYNPKTQNYE----TICNIGTGFSEALLEELHETLSPLVID---- 751
Query: 523 KRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSAP------- 570
P FY + K++PDVW E P+ K+ L+++ T EV +
Sbjct: 752 --KPKPFYSHSTVPKDQPDVWFE-PKFVWEVKAADLTLSPRYSTASDEVMGSTGGSTAKG 808
Query: 571 YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDD 619
SLRFPR + R DK ++ E+ K G + DD
Sbjct: 809 ISLRFPRYIKARDDKKPDQATTTKAVAEMYRKQESVAMD-KTKGAVDDD 856
>gi|46122151|ref|XP_385629.1| hypothetical protein FG05453.1 [Gibberella zeae PH-1]
Length = 867
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 130/517 (25%), Positives = 220/517 (42%), Gaps = 94/517 (18%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSIF---------HEFH-----PDAEDLFNVTCDLK 200
K E K+II + L+LG++E+++ HE P DL LK
Sbjct: 370 KGGPSEAKFIIRFLEGKLRLGLAERTVLVSLAQAIVAHEADAKGKAPSTTDLEKGEAILK 429
Query: 201 LVCEKLK----------DRNQRHKRQDIEV--GKAVRPQLAMRIGDAHAAWRKLHGKEVV 248
V +L + + R + ++ G ++P LA + G++
Sbjct: 430 TVYSELPSYDVIIPAILEHGIMNLRDNCKLRPGVPLKPMLAKPTKAITEVLDRFEGQKFT 489
Query: 249 IECKFDGDRIQIH---KNGSE-----------------IHYFSRSFLDHS-EYGHAMSKI 287
E K+DG+R QIH K+ + FSR+ D S +Y ++K+
Sbjct: 490 CEYKYDGERAQIHYVAKDAPQELNEASQGAAKEVAAGVASIFSRNSEDLSRKYPDILAKL 549
Query: 288 ---IEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQLCYFAFDVL 344
++ + +LD E + WD + F K ++C FAFD+L
Sbjct: 550 HTWVKPDT--KSFVLDCETVAWDVDEKKVLPFQQLMTRKKKDVKVEDVKVKVCVFAFDLL 607
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
Y+ +V+ ++L+ER ELLQ P +G +H+ Q +DE
Sbjct: 608 YLNGEAVVEKALRERRELLQTAFNPVEGEF-------AFATHMDGQ----------ELDE 650
Query: 405 VEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 460
++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G Y
Sbjct: 651 IQVFLDESVKASCEGLMVKMLDGDESGYEPSKRSRNWLKIKKDYLSGVGDSLDLVVLGAY 710
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYE 520
YG G+R FL+A P++ ++ + C +GTG S++ L+ + +L E
Sbjct: 711 YGKGKRTSVYGAFLLACYN---PNS--EKYETVCNIGTGFSEQVLEDLHMQLS------E 759
Query: 521 YPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSDIRTIRSEVFSAP----Y 571
P FY ++ + +PDVW E P+ K+ L+++ + E +
Sbjct: 760 ITIDRPKPFYSHSSGGQHQPDVWFE-PKYVWEVKTADLTLSPRYKAGAQEGVDSSGTKGI 818
Query: 572 SLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQ 608
SLRFPR RVR DK + E+ T+
Sbjct: 819 SLRFPRFIRVRDDKKADAATTSRQVAEMYRKQESVTK 855
>gi|296416928|ref|XP_002838121.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634027|emb|CAZ82312.1| unnamed protein product [Tuber melanosporum]
Length = 976
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 160/664 (24%), Positives = 277/664 (41%), Gaps = 112/664 (16%)
Query: 5 EETEVIVLVSLFNWIQKTKPAAKKRSKFRKFLDTYC--DSVDYFSALRLILPSL--DRER 60
E T LV+ FN ++ T +K S +FL + + L++ L D E
Sbjct: 334 EPTPYAALVTTFNLLESTTKRLEKISHTSRFLRQVLQLSPDELLLVIHLMINKLAADFEG 393
Query: 61 GSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMI 120
G+ ES+L + ++ G S + R+ ++ G+ +VA + ++ +
Sbjct: 394 VEMGIGESLLMKAIGESCGRSLE-----RIREDQR-----ECGDLGLVAMKSRNNQKTLF 443
Query: 121 SG-GLTIKELNDLLDRLASSEN---RAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGI 176
+ LTI ++ L +A ++ + K+S + L+ E K++I + L+LG+
Sbjct: 444 APRPLTIAVVHKGLLGIAKTKGEGGQGRKVSAIRKLLAAAKGDEAKFLIRGLEGKLRLGL 503
Query: 177 SEKSIF---------HEFH-----PDAEDLFNVTCDLKLVCEKLKDRN------QRHKRQ 216
+E+++ HE P L +L+ V +L + H
Sbjct: 504 AERTVLVSLSSAMITHEQELVGKTPTTAMLDQSELNLRSVYSELPSYEIIIPAMREHGIM 563
Query: 217 DI------EVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIH 268
DI + G V+P LA + K E K+DG+R QIH S I
Sbjct: 564 DIKKYCKLQPGVPVKPMLAKPTKAISEVLDRFENKRFTCEYKYDGERAQIHYVSPKSSIE 623
Query: 269 Y----------------FSRSFLDHS-EYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSL 310
Y FSR+ D S +Y ++ + E V+ +LD E + WD +
Sbjct: 624 YPPATLSGEPIKNLAKVFSRNSEDLSGKYPDILAAMNEWVRPEVESFVLDCEAVGWDETN 683
Query: 311 NRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQKVVK 368
NR F Q + +D D ++ C AFD+L++ V+ +SL +R +L+ K
Sbjct: 684 NRLLPFQMLQ--TRKKKDVALEDVKIRVCVHAFDLLFLNGKPVVRESLDDRRKLMHKTF- 740
Query: 369 PSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG-- 426
VP+ + + + + +++E+ F +++++ EG+++K +
Sbjct: 741 -------IEVPNQFVFARY---------MDSSHLEEIRLFLDQSVKDSCEGLMVKMMDGP 784
Query: 427 -SKWEPGDRSGKWLKLKPEYI-RAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPD 484
S +EP RS WLK+K +YI G LD+++IG Y+G G+R FL+A P
Sbjct: 785 ESFYEPSQRSRNWLKIKKDYIDELGDSLDLVVIGAYWGRGKRTSVYGSFLLACYN---PG 841
Query: 485 TYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWI 544
T + + S C +GTG ++ EL+ L P E + P FY + + +PDVW
Sbjct: 842 T--QNYESLCNIGTGFTEAELEEFYGTLHP----LEIDRAKP--FYDHPSGNAGKPDVWF 893
Query: 545 ESPEKSIILSITSDIRTIRSEVFSAP---------YSLRFPRIDRVRYDKPWHDCLDVQS 595
E ++ + + T+ +A SLRFPR R DK D
Sbjct: 894 EP---KVLWEVKAADLTLSPRYKAAAGLAGHPDKGVSLRFPRFIGPRTDKTGEDATSSSQ 950
Query: 596 FVEL 599
E+
Sbjct: 951 IAEM 954
>gi|339238913|ref|XP_003381011.1| DNA ligase 4 [Trichinella spiralis]
gi|316976028|gb|EFV59381.1| DNA ligase 4 [Trichinella spiralis]
Length = 700
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 164/368 (44%), Gaps = 80/368 (21%)
Query: 294 VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVLYVGDTSV 351
V CILDGEM+ WD + RF G + ++ GL D L CY FD L + D +
Sbjct: 33 VRNCILDGEMIAWDRTAKRFVGKGEHVDVK-----GLKFDSPLNPCYMVFDCLLLNDRPL 87
Query: 352 IHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDEVEKFFKE 411
L ER + L+ V+ R++ + D L + D+V + E
Sbjct: 88 AGLPLSERLKQLRSAVRDMPERMQ--IVDQQL---------------VDSADQVIELLNE 130
Query: 412 TIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGYYGSGRRGGEV 470
T+ +EGI+ P+YI DLDVLI+GGY+G+GRR +
Sbjct: 131 TVGRGEEGIM---------------------PDYINGLVDDLDVLIVGGYFGTGRRSNLL 169
Query: 471 AQFLVALAER------------------------PAPDTYPRRFISFCRVGTGLSDEELD 506
+ F++AL E D RF++ RVG+G S +EL
Sbjct: 170 SHFMIALMENYDKKIIETVDVDEQEFQFVVSTTFADCDFSTPRFVALGRVGSGYSLKELY 229
Query: 507 AVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEV 566
KL + + PP + ++ E+P+V+I PE+S I+ + + + + S
Sbjct: 230 DFNAKLV----QLRLKRGQPPPWLKL---GVEKPEVYIH-PEQSTIVQVKA-AQIVTSGQ 280
Query: 567 FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVH-SSNGTTQKGKEYGGLQDDKPKQFR 625
F ++LRFPR+ +R+DK W DC+ V+ F+ S++ T+++ E DD+ +
Sbjct: 281 FPLGFTLRFPRVQAIRHDKTWRDCMTVEQFLNFKDLSADCTSKRLAEMKNDNDDQIMNLK 340
Query: 626 SSRKGEKK 633
+ K K+
Sbjct: 341 TVSKKPKR 348
>gi|315427934|dbj|BAJ49525.1| ATP-dependent DNA ligase [Candidatus Caldiarchaeum subterraneum]
Length = 584
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 137/532 (25%), Positives = 240/532 (45%), Gaps = 86/532 (16%)
Query: 109 AAEVLQRRQ---GMISGGLTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMK 162
AA VL R++ + + LT++++ +++A S K+S+L+ L+ + + E K
Sbjct: 93 AAMVLLRKKPQTTLFAQELTVQDVYTAFEKIARSTGPGAVDVKMSILAGLLAQASPVEAK 152
Query: 163 WIIMIILKDLKLGISEKSIFHEFHPD-------AEDLFNVTCDLKLVC-EKLKDRNQRHK 214
I+ ++ +++LG+++ +I E +N++ D+ LV ++ + +
Sbjct: 153 HILRMVTGNMRLGVADMTILDALAKAFGGEREVYERAYNLSSDIGLVALTAAREGPEGVR 212
Query: 215 RQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF 274
R + VG VR LA R+ A K+ G+ E K+DG+R+QIHK+G + FSR
Sbjct: 213 RFRVRVGIPVRCMLAERLASAEEILEKVGGRGFA-EYKYDGERMQIHKSGQTVVIFSRRQ 271
Query: 275 LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGS------NQEIAKAARD 328
+ + + +++ + V IL+ E + D F +EI KAA
Sbjct: 272 ENITSQYPDVVEMVTRGVSAKEAILECEAVPLDPETGETLPFQELMHRKRKKEIEKAA-- 329
Query: 329 GLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVV------KPSKGRLETLVPDHG 382
+ + + FD+LYV + Q L R + L+++V K S GR+
Sbjct: 330 ---EEYPVALYFFDILYVDGEDLTTQPLPIRRKRLEEIVVESERMKLSTGRM-------- 378
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLK 440
+EVEKFF E +E EG+++K D S + G R +W+K
Sbjct: 379 ----------------VETPEEVEKFFAEAVEAGCEGLMIKSVDEESVYRAGARGWQWIK 422
Query: 441 LKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 499
LK +Y D +D++++G ++G GRR G L+A+ P D F + C+VG+G
Sbjct: 423 LKRDYRSEMIDTVDLVVVGAFHGRGRRKGRYGALLMAVY-NPEKDV----FQTVCKVGSG 477
Query: 500 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSIT--- 556
D +L+ + ++ + ++P+ + PD+W++ S++L I
Sbjct: 478 FKDVDLETLTERVNRLRLESKHPR----------VEALMEPDIWVQP---SLVLEIIGAE 524
Query: 557 ---SDIRTIRSEVFSAPYSL--RFPRID-RVRYDKPWHDCLDVQSFVELVHS 602
S + T +V Y L RFPR RVR DK D VE+ S
Sbjct: 525 VTLSPVHTCAWDVVKQGYGLGIRFPRFTGRVRDDKKPEDATTDSEIVEMYRS 576
>gi|344211456|ref|YP_004795776.1| DNA ligase [Haloarcula hispanica ATCC 33960]
gi|343782811|gb|AEM56788.1| DNA ligase [Haloarcula hispanica ATCC 33960]
Length = 554
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 220/482 (45%), Gaps = 86/482 (17%)
Query: 125 TIKELNDLLDRLAS---SENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSI 181
T+ EL+D L LA+ S ++ K+ +L L + ++ E ++ ++L ++++G+ E ++
Sbjct: 120 TVAELDDELRNLAAVDGSGSQGTKVDILFGLFSRCSSTEAGYLARLVLSEMRIGVGEGTV 179
Query: 182 -------FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRH-KRQDIEVGKAVRPQLAM--R 231
F E V+ D +V E +D + +E+G+ V+ LA
Sbjct: 180 RDAVAAAFDVPVEAVERAVQVSNDYGMVAEVARDEGESGLATVTLEIGRPVQAMLAQAGT 239
Query: 232 IGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHSEYGHAMSKIIE-- 289
+ A W + +E K+DG R+Q+H +G + FSR+ E + ++++
Sbjct: 240 VAGALEDWDR-----AAVEWKYDGARVQVHFDGEDARLFSRNM---EEVTDPLPEVVDTV 291
Query: 290 QNVLVDRCILDGEMLVWDTSLNR--FAE----FGSNQEIAKAARDGLSSDRQLCYFAFDV 343
++ L ILDGE++ D + F E F ++A AAR+ D + AFD
Sbjct: 292 ESTLDAPAILDGEVVAVDADGDPLPFQEVLRRFRRKHDVA-AARE----DVAVRLHAFDC 346
Query: 344 LYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVD 403
L+ ++ SLK RH+ RLE+L+P S V + W ++ + +
Sbjct: 347 LHADGEDLLDASLKTRHD-----------RLESLLP---AGSDVVSR---MW--LSDDAE 387
Query: 404 EVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGS 463
E+E E + EGI+LKD + + PG R W K KP+ LD ++ G +G
Sbjct: 388 EIENLEAEALAAGQEGIMLKDPTAAYSPGKRGKHWRKRKPDV----ETLDCVVTGAEWGE 443
Query: 464 GRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPK 523
GRR + F +++ D Y + V TG++DEELD + + +P+ R+
Sbjct: 444 GRRANVLGSFELSV---RTDDGYA----TVGNVATGITDEELDDLTERFEPHIRR----- 491
Query: 524 RAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRY 583
++ DV + + +I+ + + S+ +++ Y+LRFPR VR
Sbjct: 492 -------------EDGRDVAL---DPAIVFEVGYE-EIQASQSYASGYALRFPRFLSVRE 534
Query: 584 DK 585
DK
Sbjct: 535 DK 536
>gi|58270892|ref|XP_572602.1| DNA ligase [Cryptococcus neoformans var. neoformans JEC21]
gi|134115296|ref|XP_773946.1| hypothetical protein CNBH3980 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256574|gb|EAL19299.1| hypothetical protein CNBH3980 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228861|gb|AAW45295.1| DNA ligase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 803
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 125/518 (24%), Positives = 232/518 (44%), Gaps = 94/518 (18%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFH------ 186
+ + + + ++A+K+ ++ L+ E K+II + L++G+++K++
Sbjct: 308 IAKASGNASQAKKVGIIKKLLAACQGTEAKFIIRSLEGKLRIGLADKTVVVALAHAIVLK 367
Query: 187 --------PD---------AEDLFNVTCDLK---LVCEKLKDRNQRHKRQDIEV--GKAV 224
P+ AE + V +L LV L R+ ++ G +
Sbjct: 368 TIGDKKPPPEKLAIMLEQGAETVKAVYSELPSYDLVIPALLQGGVEGLRERCKLTPGVPL 427
Query: 225 RPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHS-EYG 281
+P LA + GKE E K+DG+R Q+H ++G+ I FSR+ + S +Y
Sbjct: 428 KPMLAKPTKAITEVLDRFEGKEFTCEYKYDGERAQVHLLEDGT-ISVFSRNSENMSAKYP 486
Query: 282 HAMSKIIEQNVLVDRC-ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLC 337
+ +I + ++D E + +D + F Q++++ R + ++ ++
Sbjct: 487 DLVDQIPRSMKPTAKTFVIDAEAVAYDLETKKILPF---QDLSRRKRKDVKAEDITVRVH 543
Query: 338 YFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSL 397
FAFD+LY+ S++ + LKER +LLQ+ +P + G
Sbjct: 544 IFAFDLLYLNGESLLAKELKERRQLLQEHFQPVESEFAFAKSSDG--------------- 588
Query: 398 VAHNVDEVEKFFKETIENRDEGIVLKDLGSK---WEPGDRSGKWLKLKPEYIRA-GSDLD 453
+E++ +E++++ EG+++K L S+ +EP RS WLKLK +Y+ G LD
Sbjct: 589 --STTEEIQALLEESVKDGCEGLMVKMLTSESSTYEPSRRSMNWLKLKKDYLSGVGDSLD 646
Query: 454 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 513
++++G Y+G G+R FL+A + PD+ + + C++GTG S+E L LK
Sbjct: 647 LVVVGAYHGKGKRTAVYGAFLLACYD---PDS--EHYQTICKIGTGFSEEILTQFYELLK 701
Query: 514 PYFRKYEYPKRAPPSFYQVTNNSKE----RPDVWIESPEKSIILSITSDIRTIRSEVFSA 569
P +V E +PDVW E + + +T+D+ S +++A
Sbjct: 702 PL-------------ELEVVRGDIEVGGAKPDVWFEP--RVVWEVLTADLSL--SPIYAA 744
Query: 570 PY--------SLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+ SLRFPR R+R DK + + E
Sbjct: 745 AHGVIDSRGISLRFPRFIRIRDDKSADEATTAEQVSEF 782
>gi|84617165|emb|CAH64534.1| DNA ligase (ATP) [Ferroplasma acidiphilum]
Length = 595
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 145/579 (25%), Positives = 256/579 (44%), Gaps = 91/579 (15%)
Query: 57 DRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQR- 115
D E +G+ ++ L GM ++ + + N G+ + A+E+ ++
Sbjct: 64 DYEGIEFGVSGKLIVKSLAAISGMDEEEVNKLFYKN----------GDLGITASEIREKM 113
Query: 116 -RQGMISGGLTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKD 171
++ + LT+ + L LA S K + + L+ + +++K+I II+
Sbjct: 114 EQKPLFREDLTVHYVYTRLMELAKSAGHGSVKGKTDIYADLMVNSYPEDIKYITRIIMGK 173
Query: 172 LKLGISEKSIFHE-----FHPDAEDL----FNVTCDLKLVCEKLKDRNQRHKRQDIEVGK 222
L+LG+++ +I F D D+ +N D+ L+ L+ + DI+
Sbjct: 174 LRLGVADSTILDSLVHAFFSKDNADMVETAYNFHPDIGLIATLLQ-------KGDIKAIS 226
Query: 223 AVRPQ--------LAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF 274
+ P+ LA R+ K++ V E K+DG R ++HK G +I FSR
Sbjct: 227 NIGPEPLIPFKVMLAERLRSIDDIREKMN-HHVSFEYKYDGLRTELHKKGDKIKIFSRGL 285
Query: 275 LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFG--SNQEIAKAARDGLSS 332
+ +E + + +++ + I+DGE + ++ F S + K S+
Sbjct: 286 EETTENFPDIIENFKKSYSFESIIIDGESVPFNPDTGELFPFQMVSKRRGRKYQITEKST 345
Query: 333 DRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGE 392
+ L F FD+L + +++ +ER ++L+ E V N H R
Sbjct: 346 EIPLVMFIFDILELNGRILVNLPYEERRKILE----------ENFVD----NEHFR---- 387
Query: 393 PCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGS 450
L + + +E+ KFF+++IE+ EGIV KD S + G R W+K K +Y + +
Sbjct: 388 LATRLSSDDSEEINKFFEQSIEDGCEGIVAKDTSDESVYRAGARGWLWIKFKRDYQKELA 447
Query: 451 D-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV 509
D +D++IIG + G GRR G L+A + + F S ++GTG SDE L ++
Sbjct: 448 DSMDLVIIGAFNGRGRRAGAYGALLMA-----SYNEETHAFESVTKLGTGFSDEVLFSLP 502
Query: 510 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSI------TSDIRTI- 562
L R ++ P+ + SK PD+WI P+ I++ I S I T
Sbjct: 503 KMLSDLVRDHK------PAMVE----SKMVPDIWI-YPQ--IVMEIQGAEITVSPIHTCA 549
Query: 563 --RSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+ E S P +LRFPR+ ++R DK D +EL
Sbjct: 550 FGKIEKDSGP-ALRFPRLIKIRDDKNAEDATTTNEIIEL 587
>gi|171686862|ref|XP_001908372.1| hypothetical protein [Podospora anserina S mat+]
gi|170943392|emb|CAP69045.1| unnamed protein product [Podospora anserina S mat+]
Length = 957
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 135/525 (25%), Positives = 219/525 (41%), Gaps = 105/525 (20%)
Query: 141 NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------HE-----FH 186
N A+K+ + K E K+++ + L+LG++EKS+ HE
Sbjct: 451 NGAKKVDITKD---KGGPSEAKYLVRFLEGKLRLGLAEKSVIVSLSQAVVAHEAAQKGVA 507
Query: 187 PDAEDLFNVTCDLKLVCEKLKDRN------------QRHKRQDIEVGKAVRPQLAMRIGD 234
P A D LK V +L + + G ++P LA
Sbjct: 508 PSAADFEKGEAILKTVYSELPSYDVIIPAMVEHGIMNLRDHCKLRPGVPLKPMLANPTKA 567
Query: 235 AHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEI-HYFSRSFLDHS-EYGHAMSKIIEQN- 291
+ K E K+DG+R QIH + S+S + S E G+ ++ I +N
Sbjct: 568 ITEVLDRFENKLFTCEYKYDGERAQIHYVAKDTAEELSQSAANASKEVGNGVAAIFSRNS 627
Query: 292 ---------VLVDRC----------ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSS 332
VL +LD E + WD + F Q + + +D
Sbjct: 628 EDLSKKYPDVLAKLSTWVKDDTKSFVLDCESVAWDVDEKKVLPF--QQLMTRKKKDVKIE 685
Query: 333 DRQL--CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQ 390
+ ++ C FAFD+LY+ +V+++SL+ER ELL K P +G
Sbjct: 686 EVKVKVCVFAFDLLYLNGEAVVNKSLRERRELLHKSFTPVEGEFAF-------------- 731
Query: 391 GEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIR 447
S+ +DE++ F E+++ EG+++K L S +EP RS W LK +Y+
Sbjct: 732 ---ATSMNGQELDEIQTFLDESVKASCEGLMVKMLDGEESGYEPSKRSRNW--LKKDYLA 786
Query: 448 A-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSD---E 503
G LD++++G Y+G G+R FL+A P D Y + C +GTG S+ E
Sbjct: 787 GIGDSLDLVVLGAYFGKGKRTSVYGAFLLACY-NPGTDMYE----TVCNIGTGFSEAVLE 841
Query: 504 ELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE-----KSIILSITSD 558
EL A ++K+ + PK FY ++ + +PDVW E P+ K+ L+++
Sbjct: 842 ELHAQLSKI-----TIDRPK----PFYAHSSGGQHQPDVWFE-PKYVWEVKTADLTLSPR 891
Query: 559 IRTIRSEVFSAP----YSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+ E SLRFPR +VR DK + + E+
Sbjct: 892 YKAGMKEGVDPTGEKGISLRFPRFIKVRDDKKPDEATSSRQVAEM 936
>gi|257076027|ref|ZP_05570388.1| ATP-dependent DNA ligase [Ferroplasma acidarmanus fer1]
Length = 595
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 141/578 (24%), Positives = 254/578 (43%), Gaps = 89/578 (15%)
Query: 57 DRERGSYGLKESVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQR- 115
D E +G+ ++ L GM ++ + + N G+ + A+E+ ++
Sbjct: 64 DYEGIEFGVSGKLIVKSLAAISGMDEEEVNKLFYKN----------GDLGITASEIREKM 113
Query: 116 -RQGMISGGLTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKD 171
++ + LT+ + L LA S K + + L+ + +++K+I II+
Sbjct: 114 EQKPLFREDLTVHYVYTRLMELAKSAGHGSVKGKTDIYADLMVNSYPEDIKYITRIIMGK 173
Query: 172 LKLGISEKSIF----HEFHPD-----AEDLFNVTCDLKLVCEKLKDRNQRHKRQDIEVGK 222
L+LG+++ +I H F E +N D+ L+ L+ + DI+
Sbjct: 174 LRLGVADSTILDSLVHAFSSKDNADMVETAYNFHPDIGLIATLLQ-------KGDIKAIS 226
Query: 223 AVRPQ--------LAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF 274
+ P+ LA R+ K++ V E K+DG R ++HK G +I FSR
Sbjct: 227 NIGPEPLIPFKVMLAERLRSIDDIREKMN-HHVSFEYKYDGLRTELHKKGDKIKIFSRGL 285
Query: 275 LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFG--SNQEIAKAARDGLSS 332
+ +E + + +++ + I+DGE + ++ F S + K S+
Sbjct: 286 EETTENFPDIIENFKKSYSFESIIIDGESVPFNPDTGELFPFQMVSKRRGRKYQITEKST 345
Query: 333 DRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGE 392
+ L F FD+L + ++++ +ER ++L+ E V N H R
Sbjct: 346 EIPLVMFIFDILELNGRTLVNLPYEERRKILE----------ENFVD----NEHFR---- 387
Query: 393 PCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLG--SKWEPGDRSGKWLKLKPEYIRAGS 450
L + + +E+ KFF+++IE+ EGIV KD S + G R W+K K +Y + +
Sbjct: 388 LATRLSSDDSEEINKFFEQSIEDGCEGIVAKDTSDESVYRAGARGWLWIKFKRDYQKELA 447
Query: 451 D-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVV 509
D +D++IIG + G GRR G L+A + + F S ++GTG SDE L ++
Sbjct: 448 DSMDLVIIGAFNGRGRRAGAYGALLMA-----SYNEETHAFESVTKLGTGFSDEVLFSLP 502
Query: 510 TKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITS---DIRTIRSEV 566
L R ++ P+ + SK PD+WI P+ I++ I + I +
Sbjct: 503 KMLSDLVRDHK------PAMVE----SKMVPDIWI-YPQ--IVMEIQGAEITVSPIHTCA 549
Query: 567 FS-----APYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
F + +LRFPR+ ++R DK D +EL
Sbjct: 550 FGKIEKDSGLALRFPRLIKIRDDKNAEDATTTNEIIEL 587
>gi|315426313|dbj|BAJ47954.1| ATP-dependent DNA ligase [Candidatus Caldiarchaeum subterraneum]
gi|343485110|dbj|BAJ50764.1| ATP-dependent DNA ligase [Candidatus Caldiarchaeum subterraneum]
Length = 584
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 137/532 (25%), Positives = 239/532 (44%), Gaps = 86/532 (16%)
Query: 109 AAEVLQRRQ---GMISGGLTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMK 162
AA VL R++ + + LT++++ +++A S K+S+L+ L+ + + E K
Sbjct: 93 AAMVLLRKKPQTTLFAQELTVQDVYTAFEKIARSTGPGAVDVKMSILAGLLAQASPVEAK 152
Query: 163 WIIMIILKDLKLGISEKSIFHEFHPD-------AEDLFNVTCDLKLVC-EKLKDRNQRHK 214
I+ ++ +++LG+++ +I E +N++ D+ LV ++ + +
Sbjct: 153 HILRMVTGNMRLGVADMTILDALAKAFGGEREVYERAYNLSSDIGLVALTAAREGPEGVR 212
Query: 215 RQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSF 274
R + VG VR LA R+ A K+ G+ E K+DG+R+QIHK+G + FSR
Sbjct: 213 RFRVRVGIPVRCMLAERLASAEEILEKVGGRGFA-EYKYDGERMQIHKSGQTVVIFSRRQ 271
Query: 275 LDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGS------NQEIAKAARD 328
+ + + +++ + V IL+ E + D F +EI KAA
Sbjct: 272 ENITSQYPDVVEMVTRGVSAKEAILECEAVPLDPETGETLPFQELMHRKRKKEIEKAA-- 329
Query: 329 GLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVV------KPSKGRLETLVPDHG 382
+ + + FD+LYV + Q L R + L+++V K S GR+
Sbjct: 330 ---EEYPVALYFFDILYVDGEDLTTQPLPIRRKRLEEIVVESERMKLSTGRM-------- 378
Query: 383 LNSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLK 440
+EVEKFF E +E EG+++K D S + G R +W+K
Sbjct: 379 ----------------VETPEEVEKFFAEAVEAGCEGLMIKSVDEESVYRAGARGWQWIK 422
Query: 441 LKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTG 499
LK +Y D +D++++G ++G GRR G L+A+ P D F + C+VG+G
Sbjct: 423 LKRDYRSEMIDTVDLVVVGAFHGRGRRKGRYGALLMAVY-NPEKDV----FQTVCKVGSG 477
Query: 500 LSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSIT--- 556
D +L+ + ++ ++P+ + PD+W++ S++L I
Sbjct: 478 FKDVDLETLTERVNRLRLDAKHPR----------VEALMEPDIWVQP---SLVLEIIGAE 524
Query: 557 ---SDIRTIRSEVFSAPYSL--RFPRID-RVRYDKPWHDCLDVQSFVELVHS 602
S + T +V Y L RFPR RVR DK D VE+ S
Sbjct: 525 VTLSPVHTCAWDVVKQGYGLGIRFPRFTGRVRDDKKPEDATTDSEIVEMYRS 576
>gi|30680522|ref|NP_172293.2| DNA ligase 1 [Arabidopsis thaliana]
gi|27735188|sp|Q42572.2|DNLI1_ARATH RecName: Full=DNA ligase 1; Short=AtLIG1; AltName: Full=DNA ligase
I; AltName: Full=Polydeoxyribonucleotide synthase [ATP]
1; Flags: Precursor
gi|26449576|dbj|BAC41914.1| putative DNA ligase [Arabidopsis thaliana]
gi|29029040|gb|AAO64899.1| At1g08130 [Arabidopsis thaliana]
gi|332190130|gb|AEE28251.1| DNA ligase 1 [Arabidopsis thaliana]
Length = 790
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 188/405 (46%), Gaps = 51/405 (12%)
Query: 214 KRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGS-EIHYF 270
K + +G + P LA K E K+DG+R QIH ++G+ EI+
Sbjct: 406 KTCNFTLGVPIGPMLAKPTKGVAEILNKFQDIVFTCEYKYDGERAQIHFMEDGTFEIYSR 465
Query: 271 S--RSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARD 328
+ R+ + + A+S++ + +V ILD E++ +D + F Q ++ AR
Sbjct: 466 NAERNTGKYPDVALALSRLKKPSV--KSFILDCEVVAFDREKKKILPF---QILSTRARK 520
Query: 329 GLSSDR---QLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNS 385
++ + +C FAFD+LY+ +I ++LK R E L + + G +
Sbjct: 521 NVNVNDIKVGVCIFAFDMLYLNGQQLIQENLKIRREKLYESFEEDPGYFQF--------- 571
Query: 386 HVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGS--KWEPGDRSGKWLKLKP 443
++ ++++DE++KF +++ EG+++K L S +EP RS WLKLK
Sbjct: 572 --------ATAVTSNDIDEIQKFLDASVDVGCEGLIIKTLDSDATYEPAKRSNNWLKLKK 623
Query: 444 EYIRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSD 502
+Y+ + G +D++ I ++G G+R G FL+A D F S C++GTG SD
Sbjct: 624 DYMDSIGDSVDLVPIAAFHGRGKRTGVYGAFLLACY-----DVDKEEFQSICKIGTGFSD 678
Query: 503 EELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSD 558
LD + L+ P +Y+V ++ PDVW E E K+ L+I+
Sbjct: 679 AMLDERSSSLRSQVIA------TPKQYYRVGDSL--NPDVWFEPTEVWEVKAADLTISPV 730
Query: 559 IRTIRSEV-FSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS 602
R V SLRFPR+ RVR DK + + +L +
Sbjct: 731 HRAATGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADLYQA 775
>gi|390604378|gb|EIN13769.1| DNA ligase I [Punctularia strigosozonata HHB-11173 SS5]
Length = 811
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 130/538 (24%), Positives = 231/538 (42%), Gaps = 107/538 (19%)
Query: 141 NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF------------------ 182
++ +K+SV++ L+ E K+II + L++G +E+++
Sbjct: 318 SQQKKVSVITKLLAACQGSEAKYIIRSLEGKLRIGNAERTVLVALAHAVVLAEKERGSKK 377
Query: 183 ---HEFHPDAEDLFNV---------TCD--LKLVCEKLKDRNQRHKRQDIEVGKAVRPQL 228
+ E+ N+ T D + + E D + H + + G ++P L
Sbjct: 378 WSEEKLTARLEEGANIIKSVYSELPTYDAVIPALLEHGIDGLKEHCK--LTPGVPLKPML 435
Query: 229 AMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK--NGSEIHYFSRSFLDHSEYGHAMSK 286
A + K E K+DG+R Q+H+ +GS + +SR+ D S+
Sbjct: 436 AKPTKAIGEVLDRFENKRFTCEYKYDGERAQVHRLEDGS-VRVYSRNSEDMSK---KYPD 491
Query: 287 IIEQNVLVDRCI--------LDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---Q 335
++EQ + RCI LD E + D + + F QE+++ R + + +
Sbjct: 492 LVEQ---LPRCIKETTKSFVLDAEAVAIDKTTKKLMPF---QELSRRKRKDVKVEDIQVR 545
Query: 336 LCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCW 395
+C F FD+LY+ ++ +SL ER LL++ P G +
Sbjct: 546 VCLFGFDLLYLNGEPLLRKSLSERRGLLREHFHPVDGEFQF-----------------AK 588
Query: 396 SLVAHNVDEVEKFFKETIENRDEGIVLKDL---GSKWEPGDRSGKWLKLKPEYIRA-GSD 451
S + + ++++ F +E++++ EG+++K L S +EP RS WLKLK +Y+ G
Sbjct: 589 SSDSQSTEDIQSFLEESVKDGCEGLMVKMLETEASFYEPSRRSVNWLKLKKDYLAGVGDS 648
Query: 452 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 511
D++++G YYG G+R FL+A D + + C++GTG S++ L
Sbjct: 649 FDLVVVGAYYGKGKRTNVYGAFLLACY-----DADSEEYQTICKIGTGFSEDALQQHYDT 703
Query: 512 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAP- 570
LKP + P ++ +PDVW+E K + + +D+ S +++A
Sbjct: 704 LKP------LEQSKPRGDIKIGGA---KPDVWLEP--KVVWEVLAADLSL--SPIYTAAQ 750
Query: 571 -------YSLRFPRIDRVRYDKPWHDCLDVQSFVELVHS---SNGTTQKGKEYGGLQD 618
SLRFPR RVR DK D + E+ + G + K K G D
Sbjct: 751 GLVEDRGVSLRFPRFIRVRDDKDAEDATAPEQIAEMYERQALAQGNSGKKKRSGDPDD 808
>gi|147918976|ref|YP_687298.1| ATP-dependent DNA ligase [Methanocella arvoryzae MRE50]
gi|121682804|sp|Q0W0X1.1|DNLI_UNCMA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|110622694|emb|CAJ37972.1| ATP-dependent DNA ligase [Methanocella arvoryzae MRE50]
Length = 568
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 129/525 (24%), Positives = 227/525 (43%), Gaps = 77/525 (14%)
Query: 101 NAGNFPMVAAEVLQRRQGMI---SGGLTIKELNDLLDRLASSE---NRAEKISVLSTLI- 153
G+ + A E+ Q+R+ + +T+KE+ + +A S + A+K +L L+
Sbjct: 86 KTGHLGVTAEEMFQKRRQVTFFEPEDITVKEVAETFYEIARSSGAGSSAKKQKILIGLLH 145
Query: 154 KKTNAQEMKWIIMI----ILKDLKLGISEKSIFHEFHPDAEDL---FNVTCDLKLVCEKL 206
+ T +E +I+ + +L K G+ E +I F + + +T DL
Sbjct: 146 RATTPKEAHYIVSLTIEYVLSGAKEGVMEDAIGQAFGATLDQVRRAHMLTSDLGETARIA 205
Query: 207 KDRNQRHKRQ-DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKNGS 265
K I + VRP LA + A + G E K+DG R+QIHK G
Sbjct: 206 KTEGAAGLEAITIRPMRPVRPMLAQNVSSIREALDTMGGV-AEFEMKYDGARLQIHKVGK 264
Query: 266 EIHYFSRSFLDHSEYGHAMSKIIEQNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKA 325
++ +SR D ++ + + ++V D ILD E + D R F + +
Sbjct: 265 DVKLYSRRLEDLTDALPEIVGYVRESVKSDTAILDSECIAIDKDTGRPIPFQNILTRLRR 324
Query: 326 ARDGLSSDRQ--LCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGL 383
+ +Q L FDVL+ S I L+ER ++L+++V + +
Sbjct: 325 IHKVEETQKQFPLILRPFDVLFNQGQSTIDLPLRERRKILEEIVIATDSVI--------- 375
Query: 384 NSHVRPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKP 443
+P +LV ++ ++ F+E++++ +EG++ KDL + + PG R K +K+K
Sbjct: 376 --------QPARALVTDQEEKAQELFEESVKSGNEGLMGKDLNATYTPGVRGKKMVKIKS 427
Query: 444 EYIRAGSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDE 503
LD+ I+ +G GR+ G + F VA + D ++ RV +G SDE
Sbjct: 428 VL----DTLDLAIVSAEWGHGRKAGWLTSFEVAALDEETGD-----YVILGRVASGFSDE 478
Query: 504 ELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKE----RPDVWIESPEKSIILSITSDI 559
+L + KLKP +T RP++ +E + I
Sbjct: 479 QLIEMTEKLKPL----------------ITGEHGRIVDVRPEIIVEVKFEEI-------- 514
Query: 560 RTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSN 604
+S ++S+ Y+LRFPR+ RVR D +V SF +++ N
Sbjct: 515 --QKSPIYSSGYALRFPRLVRVRDDLSPE---EVNSFTRVMNIYN 554
>gi|405122241|gb|AFR97008.1| DNA ligase [Cryptococcus neoformans var. grubii H99]
Length = 801
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 125/518 (24%), Positives = 231/518 (44%), Gaps = 94/518 (18%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEF------- 185
+ + + + ++ +K+ ++ L+ E K+II + L++G+++K++
Sbjct: 306 IAKASGNASQTKKVGIIKKLLAACQGTEAKFIIRSLEGKLRIGLADKTVVVALAHAIVLK 365
Query: 186 -------HPD---------AEDLFNVTCDLK---LVCEKLKDRNQRHKRQDIEV--GKAV 224
P+ AE + V +L LV L R+ ++ G +
Sbjct: 366 TIGDKKPQPEKLAAMLEQGAETVKAVYSELPSYDLVIPALLQGGVEGLREHCKLTPGVPL 425
Query: 225 RPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHS-EYG 281
+P LA + GKE E K+DG+R Q+H ++G+ I FSR+ + S +Y
Sbjct: 426 KPMLAKPTKAITEVLDRFEGKEFTCEYKYDGERAQVHLLEDGT-ISVFSRNSENMSAKYP 484
Query: 282 HAMSKIIEQNVLVDRC-ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDR---QLC 337
+ +I + ++D E + +D + F Q++++ R + ++ ++
Sbjct: 485 DLVDQIPRAMKPTAKTFVIDAEAVAYDLETKKILPF---QDLSRRKRKDVKAEDITVRVH 541
Query: 338 YFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSL 397
FAFD+LY+ S++ + LKER +LLQ+ +P + G
Sbjct: 542 IFAFDLLYLNGESLLAKELKERRQLLQEHFQPVESEFAFAKSSDG--------------- 586
Query: 398 VAHNVDEVEKFFKETIENRDEGIVLKDLGSK---WEPGDRSGKWLKLKPEYIRA-GSDLD 453
+E++ +E++++ EG+++K L S+ +EP RS WLKLK +Y+ G LD
Sbjct: 587 --STTEEIQALLEESVKDGCEGLMVKMLTSESSTYEPSRRSMNWLKLKKDYLSGVGDSLD 644
Query: 454 VLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTKLK 513
+++IG Y+G G+R FL+A + PD+ + + C++GTG S+E L LK
Sbjct: 645 LVVIGAYHGKGKRTAVYGAFLLACYD---PDS--EHYQTICKIGTGFSEEILAQFYEILK 699
Query: 514 PYFRKYEYPKRAPPSFYQVTNNSKE----RPDVWIESPEKSIILSITSDIRTIRSEVFSA 569
P +V E +PDVW E + + +T+D+ S +++A
Sbjct: 700 PL-------------ELEVVRGDIEVGGAKPDVWFEP--RVVWEVLTADLSL--SPIYAA 742
Query: 570 PY--------SLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
+ SLRFPR R+R DK + + E
Sbjct: 743 AHGVIDSRGISLRFPRFIRIRDDKSADEATTAEQVSEF 780
>gi|71981465|ref|NP_498653.2| Protein LIG-4 [Caenorhabditis elegans]
gi|351021323|emb|CCD63588.1| Protein LIG-4 [Caenorhabditis elegans]
Length = 741
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 131/495 (26%), Positives = 229/495 (46%), Gaps = 57/495 (11%)
Query: 12 LVSLFNWIQKTKPAAKKRSKFRKFLDTY----CDSVDYFSALRLILPSLDRERGSYGLKE 67
+V +FN I++T K++ F+K +++ D D F +R + +R R + +
Sbjct: 10 VVDVFNKIRRTSNVKSKQATFQKNFESWKEKCSDPSDMFVIIRFFVSDYERFR-KFDMGP 68
Query: 68 SVLANCLIDALGMSKDSADAVRLINWRKGGAAPNAGNFPMVAAEVLQRRQGMISGGLTIK 127
+ LA+ + A AD V I+ AA ++ E R + S +T+
Sbjct: 69 TKLASFM--AKTFHDVRADYVSTISKDASTAARQLAE--KISEEY--RTENDESTVVTVS 122
Query: 128 ELNDLLDRLASSE-NRAEKISVLSTLIKKTNAQEMKWIIMIILKDLK--LGISEKSIFHE 184
ELN++LD LA+ + K +S L+K+ + E++WI +ILK+++ LG I
Sbjct: 123 ELNEILDFLAAGPMDDGNKRDKMSKLVKRCSEDELEWIFNVILKNVESALGAPSNRILDW 182
Query: 185 FHPDAEDLFNVTCDLKLVCE-KL------KDRNQRHKRQDIEVGKAVRPQL--AMRIGDA 235
P A +++ T DLK V + KL + + + D + K P L + GD
Sbjct: 183 ISPSACAIWDQTHDLKAVLKGKLVENKGTNELGETNDDDDEHLFKIWTPMLLQKQKRGDW 242
Query: 236 HAAWRKLHGKEVVIECKFDGDRIQIHKNGSEIHYFSRSFLDHS-EYGH---AMSKIIEQ- 290
+A K G++ ++ KFDG+ + +HK G+E +F+R+ D S EYG A+ K+ +
Sbjct: 243 YANIEKFGGQKFFLQTKFDGENVLLHKKGNEYRWFTRNNNDFSKEYGDSSMAIGKLSSRI 302
Query: 291 ----NVLVDRCILDGEMLVWDTSLNRF-----AEFGSNQEIAKAARDGLSSDRQLCYFAF 341
N + I + E+++WD + A S+ ++ ++QL F
Sbjct: 303 HSFFNKECESAIFNCELMLWDKKTKKLCRHNDASTTSDAQVLSFRHVKPDDNQQLTVVLF 362
Query: 342 DVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETL-VPDHGLNSHVRPQGEPCWSLVAH 400
D+LY+ L +R E+L K+ K R +T+ V H S
Sbjct: 363 DLLYLNGKPFFGAPLHQRLEML-KIAPLKKEREDTIFVAKHEEGS--------------- 406
Query: 401 NVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGK--WLKLKPEYIRAGSDLDVLIIG 458
+++++FF+ + N +EGIV+K S + G RS W KLKP + DLD+ ++
Sbjct: 407 KKEDIQQFFEIAMANNEEGIVVKRTDSVYVKGQRSASNGWFKLKPSASK-DCDLDLALVA 465
Query: 459 GYYGSGRRGGEVAQF 473
+ G+GR G + +F
Sbjct: 466 VHPGAGRNGKTLYRF 480
>gi|310793139|gb|EFQ28600.1| DNA ligase I [Glomerella graminicola M1.001]
Length = 887
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 128/515 (24%), Positives = 219/515 (42%), Gaps = 108/515 (20%)
Query: 155 KTNAQEMKWIIMIILKDLKLGISEKSI---------FHEFH-----PDAEDLFNVTCDLK 200
K E K+++ + L+LG++E+++ FHE P D+ LK
Sbjct: 390 KGGPSEAKYLVRFLEGKLRLGLAERTVLVSLAQAVVFHEADAKGQVPKTTDVEQAEAILK 449
Query: 201 LVCEKLKDRN------------QRHKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVV 248
V +L + + ++ G ++P LA + +
Sbjct: 450 TVYSELPSYDVIIPAMVNHGIMNLREHCKLKPGVPLKPMLAKPTKAITEVLDRFENQTFT 509
Query: 249 IECKFDGDRIQIH---KNGSE-----------------IHYFSRSFLDHSE-YGHAMSKI 287
E K+DG+R QIH K+ E FSR+ D S+ Y ++K+
Sbjct: 510 CEYKYDGERAQIHYVAKSADEEISQSLPGAAKSAADGVASIFSRNSEDLSKKYPDILAKL 569
Query: 288 IEQNVLVDRC-ILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL--CYFAFDVL 344
R +LD E + WD + F Q + + +D D ++ C FAFD+L
Sbjct: 570 HTWVKADTRSFVLDCETVAWDVDEKKVLPF--QQLMTRKKKDVKIEDVKVKVCVFAFDLL 627
Query: 345 YVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWSLVAHNVDE 404
Y+ +++ +SL+ER ELL+ +P +G + +H+ Q +++
Sbjct: 628 YLNGQAIVEKSLRERRELLENAFEPVEG-------EFSFATHMNGQ----------ELEQ 670
Query: 405 VEKFFKETIENRDEGIVLKDLG---SKWEPGDRSGKWLKLKPEYIRA-GSDLDVLIIGGY 460
++ F E+++ EG+++K L S +EP RS WLK+K +Y+ G LD++++G Y
Sbjct: 671 IQVFLDESVKASCEGLMVKMLDGTESGYEPSKRSRNWLKIKKDYLSGIGDSLDLVVLGAY 730
Query: 461 YGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSD---EEL-----DAVVTKL 512
YG G+R FL+A P+ ++Y + C +GTG S+ EEL D V+ +
Sbjct: 731 YGKGKRTSVYGAFLLA-CYNPSSESYE----TVCNIGTGFSEAVLEELHKQLSDIVIDRP 785
Query: 513 KPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES----PEKSIILSITSDIRTIRSEVFS 568
KP FY ++ + +PDVW E K+ L+++ + E
Sbjct: 786 KP--------------FYAHSSGGQHQPDVWFEPRYVWEVKTADLTLSPRYKAGCKEGVD 831
Query: 569 A----PYSLRFPRIDRVRYDKPWHDCLDVQSFVEL 599
SLRFPR +VR DK + + E+
Sbjct: 832 PGGEKGISLRFPRFIKVRDDKKPDEATSSRQVAEM 866
>gi|194215708|ref|XP_001488637.2| PREDICTED: DNA ligase 1 [Equus caballus]
Length = 913
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 130/511 (25%), Positives = 214/511 (41%), Gaps = 96/511 (18%)
Query: 133 LDRLASSENRAEKISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKSIF---------- 182
+ RLA S + +K+ V+ L E ++I + L+LG++E+S+
Sbjct: 404 IARLAGSASTTKKMDVIKGLFVACRHSEARFIARALSGRLRLGLAEQSVLAALAQAVSLT 463
Query: 183 ---HEFHPDAED--------------------LFNVTCDLK-------LVCEKLKDRNQR 212
EF P D L C++ ++ E +R
Sbjct: 464 PPGQEFPPAVVDAGKGKTPEARKTWLEEQGMILKQTFCEVPDLDRIVPVLLEHGLERLPE 523
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHK-NGSEIHYFS 271
H R + G ++P LA ++ E K+DG R QIH G E+ FS
Sbjct: 524 HCR--LSPGVPLKPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHVLEGGEVKIFS 581
Query: 272 RSFLDHS-EYGHAMSKIIEQNVL-VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDG 329
R+ D++ +Y +S+I + + V ILD E + WD + F + D
Sbjct: 582 RNQEDNTGKYPDVISRIPKIRLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDA 641
Query: 330 LSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRP 389
Q+C +AFD++Y+ S++ + L R +LL++ + V
Sbjct: 642 AEIQVQVCLYAFDLIYLNGKSLVREPLSRRRQLLRE-------------------NFVET 682
Query: 390 QGEPCW--SLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+GE + SL + D++ +F ++++++ EG+++K D+ + +E RS WLKLK +Y
Sbjct: 683 EGEFVFATSLDTKDTDQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDY 742
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRV-GTGLSDE 503
+ G LD+++IG Y G G+R G FL+A D + C+V G G SDE
Sbjct: 743 LDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLACY-----DEESEELQAICKVLGAGFSDE 797
Query: 504 ELDAVVTKLK----PYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSI 555
+L+ L+ P R Y V + PD W++ K LS+
Sbjct: 798 KLEEHHCSLQALVLPSPRPY------------VRADGAVAPDHWLDPSAVWEVKCADLSL 845
Query: 556 TSDIRTIRSEV-FSAPYSLRFPRIDRVRYDK 585
+ R + SLRFPR RVR DK
Sbjct: 846 SPIYPAARGMMDGEKGISLRFPRFIRVREDK 876
>gi|406913555|gb|EKD52923.1| hypothetical protein ACD_61C00193G0001 [uncultured bacterium]
Length = 417
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 210/459 (45%), Gaps = 66/459 (14%)
Query: 167 IILKDLKLGISEKSIF----------HEFHPDAEDLFNVTCDLKLVCEKLKDRNQRH-KR 215
+++ L+LG SEK+IF + ++ F + D + + +K+R K
Sbjct: 1 MVIGKLRLGFSEKTIFDALSQMTSGGKSLRKELDNTFQIYPDPGYITQVVKERGMAGLKN 60
Query: 216 QDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKN--GSEIHYFSRS 273
++ G V P L R+ + K+ E +E K+DG R+QIH N +EI ++R+
Sbjct: 61 VRVKTGVPVVPALCQRLNNYREIVDKMG--EAAVERKYDGTRVQIHFNRLKNEIRTYTRN 118
Query: 274 FLDHSEYGHAMSKIIEQN--VLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLS 331
+ S ++ + N ++ D ILD E + +D + F I + + G++
Sbjct: 119 LEESSP---MFPELFQMNKWIMGDEVILDCEAVGYDKKTGKVLPF--QITITRKRKHGVA 173
Query: 332 SDRQ---LCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVR 388
+ L +F FD+L + S+I + ER + L KVVK + ET+VPD +
Sbjct: 174 ETAKSIPLRFFVFDILSLNGRSLIEEPYFERRKFLTKVVKKN----ETIVPDEYFKTD-- 227
Query: 389 PQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRA 448
+P EV+K + ++ EG V+K ++ PG + W+K+K +
Sbjct: 228 ---DPV---------EVQKLHDKFLKEGFEGAVIKMWNGEYLPGRQGWNWVKIKEAEGAS 275
Query: 449 G--SD-LDVLIIGGYYGSGRRGG-EVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
G SD LD++I+G G G+R G + FLV L + ++S +VGTGL+DEE
Sbjct: 276 GKLSDTLDLVILGYNLGKGKRAGFGMGAFLVGLRRGES-------WVSIAKVGTGLTDEE 328
Query: 505 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRS 564
+ KL + + P Y V+ + PDVW+E +++ I +D +S
Sbjct: 329 FKGLKIKLD------KSKTKEKPKDYLVSGSL--VPDVWVEP---LVVVEIAAD-EITKS 376
Query: 565 EVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSS 603
+ +LRFPR+ + R DK D + E+ S
Sbjct: 377 PNHAGGIALRFPRLIKFREDKGPKDATTWKEVEEIAKLS 415
>gi|397626161|gb|EJK68053.1| hypothetical protein THAOC_10812, partial [Thalassiosira oceanica]
Length = 704
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 184/406 (45%), Gaps = 42/406 (10%)
Query: 213 HKRQDIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKN-GSEIHYFS 271
H + G V P LA ++L+G E K+DG+R Q+H G E FS
Sbjct: 258 HNSITLLPGIPVVPMLAKPTKSILDVLKRLNGLRFTCEYKYDGERAQVHCTPGGETKVFS 317
Query: 272 RSFLDHSEYGHAMSKIIEQNVL---VDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARD 328
R+ LD +E + + ++ V +LD E++ ++ +F F K
Sbjct: 318 RNLLDTTEKFPEVPLYVRESCGSTDVKSFVLDTEVVAFNRETGQFVPFQVLSTRKKTEES 377
Query: 329 GLSSDRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVP-DHGLNSHV 387
S+ Q+ AFD++Y+ S++ + L R ELL K P +G+ + DH +
Sbjct: 378 AESAKVQVIVQAFDLMYLNGESLLDKPLSHRRELLHKNFLPVEGKFQYATALDHTEDGET 437
Query: 388 RPQGEPCWSLVAHNVDEVEKFFKETIENRDEGIVLK--DLGSKWEPGDRSGKWLKLKPEY 445
+E+F ++ + EG+++K D+ + +EP RS WLKLK +Y
Sbjct: 438 AV---------------IEEFLDAAVKGQCEGLMVKTLDVNAVYEPDRRSLNWLKLKKDY 482
Query: 446 IRA-GSDLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEE 504
+ G +D++ +G Y+G G+R G +L+A D F S C++GTG S+E+
Sbjct: 483 LEGLGDSVDLVPLGAYHGRGKRTGVYGAYLLACY-----DYDTEEFQSVCKIGTGFSEED 537
Query: 505 LDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIESPE----KSIILSITSDIR 560
L ++ LK + P+++ S Y V++ DVW ++ K+ LS +S +
Sbjct: 538 LKSLAADLKGHV----IPEKS--SQYVVSDTLA--CDVWFDAVRVWEVKAADLSKSSTHK 589
Query: 561 TIRSEVFSA--PYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSN 604
+ A LRFPR +RVR DK +E+ ++ +
Sbjct: 590 GAIDKTGDAGRGIGLRFPRFERVRPDKKPEQATSSDQILEMYYNQD 635
>gi|327311493|ref|YP_004338390.1| ATP-dependent DNA ligase [Thermoproteus uzoniensis 768-20]
gi|326947972|gb|AEA13078.1| ATP-dependent DNA ligase [Thermoproteus uzoniensis 768-20]
Length = 594
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 144/544 (26%), Positives = 237/544 (43%), Gaps = 87/544 (15%)
Query: 101 NAGNFPMVAAEVLQRRQ--------GMISGGLTIKELNDLLDRLASSENRAEK---ISVL 149
G+ A L RRQ G GL+I ++ D L ++A + + IS+L
Sbjct: 86 KTGDMGEAARRALSRRQAQTLLAFAGGRKAGLSISQVYDTLFKVAKASGEGSQDLKISLL 145
Query: 150 STLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFH-----PDA--EDLFNVTCDLKLV 202
S+L + + E K++ ++ L+LG+++ ++ P+ E +NV DL +
Sbjct: 146 SSLFSQLSPDEAKYVARFVVGRLRLGVADMTVIDALAEAFGVPEEALERAYNVRPDLGFL 205
Query: 203 CEKLKDRNQRHKRQ-DIEVGKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH 261
+ + +R + I G V P LA R+ + KL G + E K+DG+R QIH
Sbjct: 206 GKLVAERGAAGLAEVRITPGVPVMPMLAQRLSTSREILAKLGGA-AICEYKYDGERAQIH 264
Query: 262 KNGSEIHYFSRSFLDHSEYGHAMSKIIE---QNVLVDRCILDGEMLVWDTSLNRFAEFGS 318
+ + +SR + + HA ++E ++V +L+GE++ D F
Sbjct: 265 VSPDGVAIYSRRLENIT---HAYPDVVESVRKSVSAREAVLEGEIVAVDPDTGDLLPF-- 319
Query: 319 NQEIAKAARDGLSSDRQLCYFA----FDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRL 374
QE+ R + Y A FD+LY+ + + L R L ++V+
Sbjct: 320 -QELMHRKRKHEVEEAVKEYPAKLNLFDLLYLDGEDLTDKPLMYRRLKLSEIVE------ 372
Query: 375 ETLVPDHGLNSHVRPQGEPC----WSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWE 430
+GE W+L + ++V+ FF E I EG+V K S +E
Sbjct: 373 ---------------EGEDVVIAKWALF-DDEEKVDVFFHEAISMGMEGLVCKSPTSVYE 416
Query: 431 PGDRSGKWLKLKPEYIRAGSD-LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRR 489
G R W+K K +Y SD +D++++G +YG G+R G FL A A P DT
Sbjct: 417 MGARGWNWIKYKRDYRSEMSDTVDLVVVGAFYGRGKRAGLYGAFLTA-AYDPKTDT---- 471
Query: 490 FISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVW------ 543
F + C+VG+G +D +L + L+PY + +P+ +S+ PDVW
Sbjct: 472 FYTVCKVGSGFTDADLKKMYQMLEPYKIDHRHPR----------VSSRMEPDVWFTPGVV 521
Query: 544 IESPEKSIILSI--TSDIRTIRSEVFSAPYSLRFPRID-RVRYDKPWHDCLDVQSFVELV 600
+E I LS T + +R +V A +RFPR R R DK + V +E+
Sbjct: 522 LEIIGAEITLSPLHTCCLGAVRPDVGLA---IRFPRFTGRYRTDKSPEEATTVDELLEMY 578
Query: 601 HSSN 604
S
Sbjct: 579 KSQK 582
>gi|147901564|ref|NP_001081653.1| DNA ligase 1 [Xenopus laevis]
gi|1706480|sp|P51892.1|DNLI1_XENLA RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|1161304|gb|AAB37754.1| ligase I [Xenopus laevis]
Length = 1070
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 180/388 (46%), Gaps = 65/388 (16%)
Query: 221 GKAVRPQLAMRIGDAHAAWRKLHGKEVVIECKFDGDRIQIH--KNGSEIHYFSRSFLDHS 278
G ++P LA ++ E K+DG+R QIH +NG E+H +SR+ +++
Sbjct: 690 GIPLKPMLAHPTKGIGEVLKRFDEAAFTCEYKYDGERAQIHILENG-EVHVYSRNQENNT 748
Query: 279 -EYGHAMSKIIE-QNVLVDRCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLSSDRQL 336
+Y +S+I + + V CILD E + D + F + D Q+
Sbjct: 749 TKYPDIISRIPKIKKESVKSCILDTEAVAGDAEKKQIQPFQVLTTRKRKDVDASEIKVQV 808
Query: 337 CYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPSKGRLETLVPDHGLNSHVRPQGEPCWS 396
C +AFD+LY+ S++ + +R +LL+ +S + +G+ ++
Sbjct: 809 CVYAFDMLYLNGESLVKEPFAKRRQLLR-------------------DSFLETEGQFMFA 849
Query: 397 --LVAHNVDEVEKFFKETIENRDEGIVLKDL--GSKWEPGDRSGKWLKLKPEYIRA-GSD 451
+ N DE+ +F ++I++ EG+++K L + +E RS WLKLK +Y+ G
Sbjct: 850 TYMDKSNTDEISEFLDQSIKDSCEGLMVKTLEQDATYEIAKRSHNWLKLKKDYLEGVGDT 909
Query: 452 LDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVTK 511
LD+++IG Y G G+R G FL+A + D + + C++GTG +D++L+
Sbjct: 910 LDLVVIGAYLGKGKRTGIYGGFLLA-----SYDEESEEYQTICKIGTGFTDDDLEKHYNF 964
Query: 512 LKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIE--------------SPEKSIILSITS 557
LK + E P+ S+Y+ +S PD W + SP L +
Sbjct: 965 LKDHV--IENPR----SYYRW--DSATEPDHWFDPVQVWEVKCADLSISPVHKAALGLVE 1016
Query: 558 DIRTIRSEVFSAPYSLRFPRIDRVRYDK 585
D + I SLRFPR R+R DK
Sbjct: 1017 DQKGI---------SLRFPRFLRIRDDK 1035
>gi|448336720|ref|ZP_21525813.1| DNA ligase [Natrinema pallidum DSM 3751]
gi|445628270|gb|ELY81579.1| DNA ligase [Natrinema pallidum DSM 3751]
Length = 577
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 136/498 (27%), Positives = 216/498 (43%), Gaps = 92/498 (18%)
Query: 124 LTIKELNDLLDRLASSENRAE---KISVLSTLIKKTNAQEMKWIIMIILKDLKLGISEKS 180
LT++E+ + L LA++E K+ +L L + +++E +++ ++L ++++G+ E +
Sbjct: 120 LTVREVANTLAELAAAEGSGSHDRKVDLLFGLFNRASSEEARYLARLVLSEMRIGVGEGT 179
Query: 181 I-------FHEFHPDAEDLFNVTCDLKLVCEKLKDRNQRH-KRQDIEVGKAVRPQLAM-- 230
+ F E V+ D V +D D+ VG+ V+ LA
Sbjct: 180 VRDAIAAAFEVPEDRVERALQVSNDYGRVARIARDEGVVGLDAMDLAVGRPVQAMLAQAG 239
Query: 231 RIGDAHAAWRKLHGKEVVIECKFDGDRIQIHKN--------GS--EIHYFSRSFLDHSEY 280
+ DA W +E K+DG RIQ+H + GS E FSR+ D ++
Sbjct: 240 TVTDALEEW-----GTAAVEWKYDGARIQLHHDPAGMDDGDGSTVETRVFSRNMEDVTD- 293
Query: 281 GHAMSKIIE--QNVLVDRCILDGEMLVWDT--SLNRFAE----FGSNQEIAKAARDGLSS 332
A+ +++E L ILDGE++ D S F E F ++AKA D S
Sbjct: 294 --ALPEVVEFAAETLDAPAILDGEVVAVDDDGSPLPFQEVLKRFRRKHDVAKARED--VS 349
Query: 333 DRQLCYFAFDVLYVGDTSVIHQSLKERHELLQKVVKPS--KGRLETLVPDHGLNSHVRPQ 390
R + FD L+ G ++ L RH+ L+ V+ S G V D +
Sbjct: 350 VRPVF---FDCLHAGGEDLLEDPLTTRHDGLRSVLADSGTDGDAGDAVADEDIEGL---- 402
Query: 391 GEPCWSLVAHNVDEVEKFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPEYIRAGS 450
W+ + DE+E + +E EGI+LKD GS + PG R W K KP+
Sbjct: 403 -SLLWT--TDDPDEIESIDADALEAGHEGIMLKDPGSTYSPGRRGKHWRKRKPDV----E 455
Query: 451 DLDVLIIGGYYGSGRRGGEVAQFLVALAERPAPDTYPRRFISFCRVGTGLSDEELDAVVT 510
+D ++ G +G GRR + F LA R D F + +V TG++DE+L +
Sbjct: 456 TIDCVVTGAEWGEGRRATFLGTF--ELAVRTGDD-----FETVGKVATGITDEKLAELTD 508
Query: 511 KLKPYFRKYEYPKRAPPSFYQVTNNSKE---RPDVWIESPEKSIILSITSDIRTIRSEVF 567
L+P+ N +E P+V E + I S T +
Sbjct: 509 LLEPHI---------------AAENGQEVDLEPEVVFEVGYEEIQSSPT----------Y 543
Query: 568 SAPYSLRFPRIDRVRYDK 585
S+ Y+LRFPR VRYDK
Sbjct: 544 SSGYALRFPRFQGVRYDK 561
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,576,586,982
Number of Sequences: 23463169
Number of extensions: 459538295
Number of successful extensions: 1076957
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 2503
Number of HSP's that attempted gapping in prelim test: 1063981
Number of HSP's gapped (non-prelim): 4835
length of query: 665
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 516
effective length of database: 8,863,183,186
effective search space: 4573402523976
effective search space used: 4573402523976
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)