Query 006004
Match_columns 665
No_of_seqs 460 out of 3477
Neff 6.9
Searched_HMMs 46136
Date Thu Mar 28 16:58:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006004.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006004hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0600 Cdc2-related protein k 100.0 4.6E-88 9.9E-93 718.8 34.2 432 120-551 79-515 (560)
2 KOG0663 Protein kinase PITSLRE 100.0 2.8E-60 6.1E-65 484.4 18.4 306 156-463 74-384 (419)
3 KOG0659 Cdk activating kinase 100.0 7.6E-60 1.6E-64 469.2 20.8 297 158-458 2-299 (318)
4 KOG0661 MAPK related serine/th 100.0 1.1E-59 2.4E-64 498.5 14.4 287 157-446 9-297 (538)
5 KOG0593 Predicted protein kina 100.0 5.4E-57 1.2E-61 455.2 18.7 285 158-445 2-289 (396)
6 KOG0615 Serine/threonine prote 100.0 4.1E-56 8.9E-61 464.5 16.8 263 157-447 171-444 (475)
7 KOG0660 Mitogen-activated prot 100.0 4E-55 8.6E-60 452.8 20.1 292 159-451 23-321 (359)
8 KOG0575 Polo-like serine/threo 100.0 2.5E-54 5.3E-59 470.8 25.9 257 158-446 18-275 (592)
9 KOG0598 Ribosomal protein S6 k 100.0 2.3E-53 4.9E-58 441.2 20.7 262 156-448 23-289 (357)
10 KOG0594 Protein kinase PCTAIRE 100.0 4.9E-53 1.1E-57 438.2 20.9 290 158-448 11-310 (323)
11 KOG0581 Mitogen-activated prot 100.0 3.4E-52 7.3E-57 432.6 19.8 258 157-447 78-342 (364)
12 KOG0605 NDR and related serine 100.0 8.2E-52 1.8E-56 444.9 23.2 278 155-460 138-465 (550)
13 KOG0592 3-phosphoinositide-dep 100.0 6.3E-52 1.4E-56 445.4 20.7 262 155-448 70-346 (604)
14 KOG0658 Glycogen synthase kina 100.0 2.2E-51 4.9E-56 425.6 18.5 281 159-448 25-314 (364)
15 KOG0616 cAMP-dependent protein 100.0 5.1E-51 1.1E-55 411.4 18.9 257 156-447 42-304 (355)
16 KOG0033 Ca2+/calmodulin-depend 100.0 1.6E-52 3.5E-57 412.0 5.6 288 156-479 9-300 (355)
17 KOG0595 Serine/threonine-prote 100.0 3.6E-50 7.8E-55 420.6 21.4 266 152-447 4-275 (429)
18 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.7E-48 3.7E-53 407.6 27.6 283 157-443 4-288 (288)
19 KOG0583 Serine/threonine prote 100.0 1.9E-48 4.2E-53 422.1 26.2 258 156-445 15-280 (370)
20 cd07848 STKc_CDKL5 Catalytic d 100.0 5.3E-48 1.2E-52 401.9 28.0 284 158-443 1-287 (287)
21 KOG0591 NIMA (never in mitosis 100.0 1.5E-50 3.2E-55 405.1 7.7 247 159-434 20-275 (375)
22 KOG0662 Cyclin-dependent kinas 100.0 3.4E-49 7.4E-54 373.0 15.0 286 159-446 3-289 (292)
23 KOG0667 Dual-specificity tyros 100.0 3.1E-48 6.8E-53 427.1 24.6 281 159-448 187-510 (586)
24 KOG0588 Serine/threonine prote 100.0 1.2E-48 2.6E-53 427.4 19.8 258 158-447 12-270 (786)
25 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.7E-47 3.6E-52 402.7 27.9 285 157-446 4-294 (303)
26 KOG0694 Serine/threonine prote 100.0 3.3E-48 7.2E-53 427.0 22.5 262 154-448 364-632 (694)
27 cd07859 STKc_TDY_MAPK_plant Ca 100.0 4.8E-47 1E-51 403.9 27.0 287 159-448 1-298 (338)
28 KOG0597 Serine-threonine prote 100.0 1.7E-48 3.7E-53 418.5 15.7 256 158-446 2-257 (808)
29 KOG0669 Cyclin T-dependent kin 100.0 7.5E-50 1.6E-54 394.4 3.9 292 158-449 17-324 (376)
30 KOG0610 Putative serine/threon 100.0 8.5E-48 1.8E-52 402.8 19.1 273 157-458 76-410 (459)
31 KOG0585 Ca2+/calmodulin-depend 100.0 1.3E-47 2.8E-52 406.2 19.3 264 156-446 95-378 (576)
32 cd07862 STKc_CDK6 Catalytic do 100.0 1.8E-46 3.9E-51 391.0 27.6 280 159-443 2-290 (290)
33 cd07853 STKc_NLK Catalytic dom 100.0 1.4E-46 2.9E-51 408.2 26.4 287 159-446 1-294 (372)
34 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.4E-46 5.2E-51 395.0 27.4 286 157-447 5-293 (309)
35 PTZ00036 glycogen synthase kin 100.0 1.7E-46 3.7E-51 417.4 27.1 282 158-447 66-358 (440)
36 KOG0666 Cyclin C-dependent kin 100.0 4.7E-48 1E-52 391.2 12.9 291 159-449 25-346 (438)
37 cd07845 STKc_CDK10 Catalytic d 100.0 5.5E-46 1.2E-50 392.0 28.7 301 157-459 6-309 (309)
38 cd07875 STKc_JNK1 Catalytic do 100.0 5.2E-46 1.1E-50 402.2 29.1 291 157-453 23-331 (364)
39 cd07876 STKc_JNK2 Catalytic do 100.0 7.7E-46 1.7E-50 400.1 29.2 287 157-449 20-324 (359)
40 PHA03212 serine/threonine kina 100.0 3.4E-46 7.3E-51 409.0 25.0 281 158-449 92-385 (391)
41 KOG0032 Ca2+/calmodulin-depend 100.0 4E-46 8.7E-51 404.5 25.1 259 158-447 35-300 (382)
42 cd07863 STKc_CDK4 Catalytic do 100.0 1E-45 2.2E-50 384.6 26.9 280 159-443 1-288 (288)
43 KOG0198 MEKK and related serin 100.0 7E-47 1.5E-51 397.2 18.3 259 159-446 18-282 (313)
44 KOG0578 p21-activated serine/t 100.0 1E-46 2.2E-51 408.4 18.4 255 159-445 274-528 (550)
45 cd07874 STKc_JNK3 Catalytic do 100.0 1.9E-45 4.2E-50 396.1 27.9 287 157-449 16-320 (355)
46 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.3E-45 2.7E-50 395.5 26.0 286 157-448 14-306 (343)
47 KOG0582 Ste20-like serine/thre 100.0 6.3E-46 1.4E-50 391.4 22.4 271 155-446 23-299 (516)
48 cd07839 STKc_CDK5 Catalytic do 100.0 1.8E-45 3.9E-50 381.9 24.8 283 159-443 1-284 (284)
49 PTZ00263 protein kinase A cata 100.0 1.6E-45 3.5E-50 393.5 25.1 255 157-446 17-277 (329)
50 cd05612 STKc_PRKX_like Catalyt 100.0 1.2E-45 2.6E-50 387.0 23.0 254 158-446 1-260 (291)
51 cd07861 STKc_CDK1_euk Catalyti 100.0 3.8E-45 8.1E-50 379.3 26.3 283 159-443 1-285 (285)
52 cd07873 STKc_PCTAIRE1 Catalyti 100.0 5.2E-45 1.1E-49 383.1 27.7 287 157-446 5-292 (301)
53 KOG0599 Phosphorylase kinase g 100.0 8.2E-47 1.8E-51 376.4 11.8 259 159-445 18-288 (411)
54 cd05571 STKc_PKB Catalytic dom 100.0 2.2E-45 4.9E-50 391.1 23.6 251 164-446 1-257 (323)
55 cd05599 STKc_NDR_like Catalyti 100.0 2E-45 4.4E-50 397.0 23.6 261 158-446 1-302 (364)
56 KOG0611 Predicted serine/threo 100.0 1.4E-46 3E-51 390.4 13.6 254 158-444 53-307 (668)
57 cd07868 STKc_CDK8 Catalytic do 100.0 9.5E-45 2.1E-49 383.5 27.6 276 164-443 7-317 (317)
58 KOG0580 Serine/threonine prote 100.0 1.9E-46 4.2E-51 368.8 13.5 256 156-445 20-278 (281)
59 cd05628 STKc_NDR1 Catalytic do 100.0 4.3E-45 9.4E-50 395.3 25.2 261 158-446 1-299 (363)
60 cd05631 STKc_GRK4 Catalytic do 100.0 4.3E-45 9.4E-50 381.4 24.2 260 159-447 1-268 (285)
61 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 4.6E-45 9.9E-50 389.9 24.7 262 159-447 2-264 (333)
62 cd05625 STKc_LATS1 Catalytic d 100.0 7.7E-45 1.7E-49 395.8 25.1 260 159-446 2-311 (382)
63 cd05626 STKc_LATS2 Catalytic d 100.0 8.2E-45 1.8E-49 395.8 25.3 261 159-446 2-311 (381)
64 PTZ00284 protein kinase; Provi 100.0 8.6E-45 1.9E-49 406.4 25.9 282 157-447 128-445 (467)
65 PTZ00426 cAMP-dependent protei 100.0 7.4E-45 1.6E-49 390.9 24.3 256 156-446 28-290 (340)
66 cd05573 STKc_ROCK_NDR_like Cat 100.0 5.2E-45 1.1E-49 390.8 22.3 262 158-447 1-292 (350)
67 cd05629 STKc_NDR_like_fungal C 100.0 8.4E-45 1.8E-49 394.8 23.9 261 158-446 1-311 (377)
68 cd05598 STKc_LATS Catalytic do 100.0 7.3E-45 1.6E-49 394.9 22.1 260 159-446 2-307 (376)
69 cd05596 STKc_ROCK Catalytic do 100.0 1.9E-44 4.2E-49 391.9 24.9 264 156-446 41-310 (370)
70 cd07832 STKc_CCRK Catalytic do 100.0 9.2E-44 2E-48 368.7 28.4 283 159-444 1-286 (286)
71 cd05585 STKc_YPK1_like Catalyt 100.0 2.4E-44 5.1E-49 381.2 23.7 248 166-445 1-252 (312)
72 cd05601 STKc_CRIK Catalytic do 100.0 1.2E-44 2.6E-49 385.9 21.6 262 158-446 1-269 (330)
73 cd05614 STKc_MSK2_N N-terminal 100.0 2.2E-44 4.8E-49 384.2 23.0 262 159-446 1-273 (332)
74 cd05593 STKc_PKB_gamma Catalyt 100.0 3E-44 6.5E-49 383.7 24.0 251 164-446 1-257 (328)
75 cd05621 STKc_ROCK2 Catalytic d 100.0 4.3E-44 9.3E-49 389.4 25.1 265 156-447 41-311 (370)
76 cd05595 STKc_PKB_beta Catalyti 100.0 3.6E-44 7.7E-49 382.1 23.5 251 164-446 1-257 (323)
77 cd05627 STKc_NDR2 Catalytic do 100.0 2.8E-44 6.1E-49 388.3 22.8 262 158-447 1-300 (360)
78 KOG4717 Serine/threonine prote 100.0 7.3E-45 1.6E-49 386.3 17.1 258 158-447 18-277 (864)
79 cd07860 STKc_CDK2_3 Catalytic 100.0 1.1E-43 2.3E-48 368.6 25.4 281 159-443 1-284 (284)
80 cd05589 STKc_PKN Catalytic dom 100.0 8.8E-44 1.9E-48 378.8 25.3 254 160-446 1-263 (324)
81 cd07866 STKc_BUR1 Catalytic do 100.0 1.5E-43 3.2E-48 371.5 26.5 287 157-443 7-311 (311)
82 KOG0201 Serine/threonine prote 100.0 4.4E-46 9.5E-51 392.5 7.3 256 158-445 13-268 (467)
83 cd05594 STKc_PKB_alpha Catalyt 100.0 2.7E-44 5.9E-49 382.9 21.1 251 164-446 1-258 (325)
84 cd07841 STKc_CDK7 Catalytic do 100.0 2.6E-43 5.5E-48 368.7 28.0 290 159-451 1-293 (298)
85 cd05597 STKc_DMPK_like Catalyt 100.0 1.4E-43 3E-48 378.9 26.1 264 158-446 1-272 (331)
86 cd05587 STKc_cPKC Catalytic do 100.0 1.1E-43 2.4E-48 378.1 25.1 256 159-446 1-263 (324)
87 cd07831 STKc_MOK Catalytic dom 100.0 3.3E-43 7.3E-48 363.7 27.8 280 160-443 1-282 (282)
88 cd07867 STKc_CDC2L6 Catalytic 100.0 3.1E-43 6.7E-48 371.3 28.0 276 164-443 7-317 (317)
89 cd06649 PKc_MEK2 Catalytic dom 100.0 2.1E-43 4.5E-48 377.2 26.5 284 157-446 4-307 (331)
90 cd05590 STKc_nPKC_eta Catalyti 100.0 8.6E-44 1.9E-48 378.7 23.0 251 164-446 1-259 (320)
91 cd07850 STKc_JNK Catalytic dom 100.0 4.4E-43 9.6E-48 377.8 28.1 285 158-448 16-319 (353)
92 cd07843 STKc_CDC2L1 Catalytic 100.0 3E-43 6.5E-48 367.7 25.5 286 157-443 4-293 (293)
93 cd07847 STKc_CDKL1_4 Catalytic 100.0 9E-43 2E-47 361.2 28.5 283 158-443 1-286 (286)
94 cd07844 STKc_PCTAIRE_like Cata 100.0 6.3E-43 1.4E-47 364.5 27.4 284 157-443 4-291 (291)
95 cd07836 STKc_Pho85 Catalytic d 100.0 6E-43 1.3E-47 362.6 27.0 280 159-443 1-284 (284)
96 cd07864 STKc_CDK12 Catalytic d 100.0 4.7E-43 1E-47 367.0 26.4 288 156-443 5-302 (302)
97 cd05622 STKc_ROCK1 Catalytic d 100.0 2.6E-43 5.6E-48 383.3 25.2 264 157-447 42-311 (371)
98 cd05591 STKc_nPKC_epsilon Cata 100.0 1.9E-43 4.2E-48 375.7 23.6 251 164-446 1-260 (321)
99 KOG0612 Rho-associated, coiled 100.0 3.7E-45 7.9E-50 418.0 10.6 277 156-460 73-358 (1317)
100 cd07840 STKc_CDK9_like Catalyt 100.0 7.4E-43 1.6E-47 361.1 26.9 284 160-443 1-287 (287)
101 cd05616 STKc_cPKC_beta Catalyt 100.0 3.7E-43 8E-48 373.9 25.1 256 159-446 1-263 (323)
102 cd07865 STKc_CDK9 Catalytic do 100.0 8.7E-43 1.9E-47 365.5 27.4 287 157-443 11-310 (310)
103 KOG0589 Serine/threonine prote 100.0 2.9E-44 6.3E-49 387.0 16.3 258 157-444 3-262 (426)
104 cd05623 STKc_MRCK_alpha Cataly 100.0 3.9E-43 8.4E-48 375.3 24.7 264 158-446 1-272 (332)
105 cd05584 STKc_p70S6K Catalytic 100.0 3.7E-43 7.9E-48 374.1 24.1 252 163-446 1-262 (323)
106 cd05608 STKc_GRK1 Catalytic do 100.0 4E-43 8.7E-48 365.6 23.6 254 166-447 1-264 (280)
107 cd05592 STKc_nPKC_theta_delta 100.0 3.6E-43 7.8E-48 373.3 23.6 251 164-446 1-254 (316)
108 cd07837 STKc_CdkB_plant Cataly 100.0 1E-42 2.3E-47 363.2 26.4 285 158-444 1-295 (295)
109 PLN00009 cyclin-dependent kina 100.0 9.9E-43 2.1E-47 363.9 26.2 286 158-446 2-290 (294)
110 KOG0696 Serine/threonine prote 100.0 1.1E-44 2.3E-49 377.1 10.7 333 84-448 257-614 (683)
111 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.2E-42 2.7E-47 360.6 25.9 284 158-443 1-286 (286)
112 cd07833 STKc_CDKL Catalytic do 100.0 1.8E-42 3.9E-47 359.3 27.1 283 159-443 2-288 (288)
113 cd05605 STKc_GRK4_like Catalyt 100.0 8.8E-43 1.9E-47 364.0 24.9 259 159-446 1-267 (285)
114 cd05575 STKc_SGK Catalytic dom 100.0 4.1E-43 8.9E-48 373.5 22.6 251 164-446 1-257 (323)
115 PHA03209 serine/threonine kina 100.0 6.6E-43 1.4E-47 377.8 24.4 276 158-445 66-356 (357)
116 PLN00034 mitogen-activated pro 100.0 7.7E-43 1.7E-47 376.1 24.9 259 157-447 73-335 (353)
117 cd05624 STKc_MRCK_beta Catalyt 100.0 8E-43 1.7E-47 372.9 24.6 264 158-446 1-272 (331)
118 cd07855 STKc_ERK5 Catalytic do 100.0 1.1E-42 2.4E-47 371.6 25.5 289 158-449 5-303 (334)
119 cd05620 STKc_nPKC_delta Cataly 100.0 5.9E-43 1.3E-47 371.6 23.1 251 164-446 1-254 (316)
120 KOG0690 Serine/threonine prote 100.0 3.5E-44 7.6E-49 364.4 12.8 260 156-447 166-431 (516)
121 cd05588 STKc_aPKC Catalytic do 100.0 8E-43 1.7E-47 372.7 23.8 252 164-446 1-268 (329)
122 KOG0579 Ste20-like serine/thre 100.0 9.2E-44 2E-48 384.3 16.3 259 158-446 32-295 (1187)
123 PF00069 Pkinase: Protein kina 100.0 9.6E-43 2.1E-47 355.1 22.8 260 160-443 1-260 (260)
124 PHA03207 serine/threonine kina 100.0 9.6E-43 2.1E-47 381.3 24.3 281 158-448 92-383 (392)
125 cd05582 STKc_RSK_N N-terminal 100.0 3.5E-43 7.7E-48 372.9 20.1 251 164-446 2-260 (318)
126 cd05570 STKc_PKC Catalytic dom 100.0 8.7E-43 1.9E-47 370.4 23.1 251 164-446 1-258 (318)
127 cd07849 STKc_ERK1_2_like Catal 100.0 3.4E-42 7.3E-47 368.2 27.5 288 158-448 5-300 (336)
128 cd05615 STKc_cPKC_alpha Cataly 100.0 1.8E-42 3.9E-47 369.0 25.4 256 159-446 1-263 (323)
129 cd07835 STKc_CDK1_like Catalyt 100.0 2.7E-42 5.8E-47 358.0 25.7 281 160-443 1-283 (283)
130 cd07870 STKc_PFTAIRE2 Catalyti 100.0 6.3E-42 1.4E-46 357.3 28.2 281 158-443 5-291 (291)
131 PTZ00024 cyclin-dependent prot 100.0 3.2E-42 7E-47 367.6 26.6 295 158-456 8-329 (335)
132 KOG0986 G protein-coupled rece 100.0 1.3E-43 2.8E-48 373.6 15.1 269 152-449 179-455 (591)
133 cd05586 STKc_Sck1_like Catalyt 100.0 4.1E-43 8.8E-48 374.4 19.1 251 166-446 1-259 (330)
134 KOG0192 Tyrosine kinase specif 100.0 1.8E-42 3.9E-47 373.1 23.9 251 159-439 42-298 (362)
135 cd07858 STKc_TEY_MAPK_plant Ca 100.0 4.3E-42 9.3E-47 367.8 26.6 291 158-450 5-301 (337)
136 cd05618 STKc_aPKC_iota Catalyt 100.0 2.1E-42 4.6E-47 369.6 24.0 252 164-446 1-268 (329)
137 cd07834 STKc_MAPK Catalytic do 100.0 3.2E-42 7E-47 366.2 25.1 289 159-448 1-297 (330)
138 cd05602 STKc_SGK1 Catalytic do 100.0 1.5E-42 3.3E-47 369.4 22.5 251 164-446 1-257 (325)
139 cd06625 STKc_MEKK3_like Cataly 100.0 5.9E-42 1.3E-46 350.8 25.8 257 158-443 2-263 (263)
140 cd05619 STKc_nPKC_theta Cataly 100.0 2.4E-42 5.2E-47 367.1 23.7 251 164-446 1-254 (316)
141 cd05604 STKc_SGK3 Catalytic do 100.0 1.1E-42 2.3E-47 370.6 20.9 251 164-446 1-257 (325)
142 PHA03211 serine/threonine kina 100.0 3.2E-42 7E-47 384.4 25.3 277 157-445 168-460 (461)
143 cd05603 STKc_SGK2 Catalytic do 100.0 1.9E-42 4.2E-47 367.7 21.7 251 164-446 1-257 (321)
144 cd07842 STKc_CDK8_like Catalyt 100.0 8.2E-42 1.8E-46 359.5 26.2 285 159-443 1-316 (316)
145 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.5E-41 3.2E-46 365.0 28.2 287 157-449 14-307 (343)
146 cd05118 STKc_CMGC Catalytic do 100.0 7.3E-42 1.6E-46 353.4 24.3 282 160-443 1-283 (283)
147 cd08223 STKc_Nek4 Catalytic do 100.0 2E-41 4.4E-46 345.6 27.1 255 159-443 1-257 (257)
148 cd07851 STKc_p38 Catalytic dom 100.0 8.1E-42 1.8E-46 366.8 25.3 288 157-450 14-308 (343)
149 cd06650 PKc_MEK1 Catalytic dom 100.0 5.6E-42 1.2E-46 366.9 23.6 284 157-446 4-305 (333)
150 cd07879 STKc_p38delta_MAPK13 C 100.0 1.9E-41 4E-46 363.8 27.5 283 158-447 15-304 (342)
151 cd05630 STKc_GRK6 Catalytic do 100.0 1.1E-41 2.4E-46 356.0 24.9 259 159-446 1-267 (285)
152 cd07829 STKc_CDK_like Catalyti 100.0 1.1E-41 2.5E-46 351.8 24.7 282 160-443 1-282 (282)
153 cd05617 STKc_aPKC_zeta Catalyt 100.0 7.6E-42 1.6E-46 364.8 23.9 252 164-446 1-266 (327)
154 PTZ00283 serine/threonine prot 100.0 1.2E-41 2.5E-46 383.9 26.2 259 158-445 32-302 (496)
155 cd05632 STKc_GRK5 Catalytic do 100.0 2.5E-41 5.4E-46 353.0 25.7 259 159-446 1-267 (285)
156 KOG0574 STE20-like serine/thre 100.0 9.5E-45 2E-49 365.2 -0.3 256 159-447 34-290 (502)
157 cd05607 STKc_GRK7 Catalytic do 100.0 1.1E-41 2.4E-46 354.3 22.5 255 166-448 1-262 (277)
158 PTZ00267 NIMA-related protein 100.0 2.7E-41 5.8E-46 379.5 27.1 257 157-445 66-328 (478)
159 cd05574 STKc_phototropin_like 100.0 4E-41 8.8E-46 355.7 26.7 263 159-450 2-299 (316)
160 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.5E-41 3.3E-46 362.9 23.4 253 158-439 7-329 (338)
161 KOG0577 Serine/threonine prote 100.0 4.1E-43 8.9E-48 377.8 11.1 255 159-446 27-284 (948)
162 cd07877 STKc_p38alpha_MAPK14 C 100.0 4.8E-41 1E-45 361.2 27.2 285 158-449 17-309 (345)
163 cd07857 STKc_MPK1 Catalytic do 100.0 7.7E-41 1.7E-45 357.1 27.9 288 159-448 1-300 (332)
164 cd07852 STKc_MAPK15 Catalytic 100.0 3.4E-41 7.3E-46 360.4 24.3 289 156-446 5-301 (337)
165 cd07854 STKc_MAPK4_6 Catalytic 100.0 8.8E-41 1.9E-45 358.6 27.0 286 158-447 5-307 (342)
166 cd06615 PKc_MEK Catalytic doma 100.0 7E-41 1.5E-45 353.8 25.8 280 158-446 1-293 (308)
167 PTZ00266 NIMA-related protein 100.0 4.4E-41 9.5E-46 394.9 26.3 262 156-447 11-302 (1021)
168 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.2E-40 2.6E-45 355.9 27.4 286 156-447 8-295 (328)
169 cd08529 STKc_FA2-like Catalyti 100.0 1.4E-40 2.9E-45 338.9 26.5 254 159-443 1-256 (256)
170 cd05580 STKc_PKA Catalytic dom 100.0 1.1E-40 2.4E-45 348.4 26.3 255 158-447 1-261 (290)
171 cd07838 STKc_CDK4_6_like Catal 100.0 1.5E-40 3.2E-45 344.4 26.8 279 160-443 1-287 (287)
172 cd08227 PK_STRAD_alpha Pseudok 100.0 4.7E-41 1E-45 358.0 23.1 281 162-445 2-312 (327)
173 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 8.5E-41 1.8E-45 347.6 23.9 260 158-447 1-269 (286)
174 cd06619 PKc_MKK5 Catalytic dom 100.0 1.7E-40 3.6E-45 345.2 25.9 255 159-446 2-259 (279)
175 KOG0607 MAP kinase-interacting 100.0 4.6E-42 1E-46 348.6 13.8 260 160-447 79-368 (463)
176 KOG0604 MAP kinase-activated p 100.0 6.3E-42 1.4E-46 345.5 14.4 256 157-447 60-329 (400)
177 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.5E-40 3.3E-45 340.2 24.9 261 158-443 1-267 (267)
178 PHA03210 serine/threonine kina 100.0 6.2E-41 1.3E-45 378.6 23.3 284 157-446 147-460 (501)
179 cd06617 PKc_MKK3_6 Catalytic d 100.0 2.2E-40 4.7E-45 343.2 25.5 258 158-446 1-267 (283)
180 cd06644 STKc_STK10_LOK Catalyt 100.0 2.5E-40 5.4E-45 345.8 25.2 259 158-446 12-275 (292)
181 KOG0671 LAMMER dual specificit 100.0 5.1E-42 1.1E-46 356.5 12.2 279 158-446 89-412 (415)
182 cd06646 STKc_MAP4K5 Catalytic 100.0 1.1E-40 2.5E-45 342.8 22.2 257 158-442 9-267 (267)
183 cd05609 STKc_MAST Catalytic do 100.0 3.4E-40 7.3E-45 347.5 26.2 262 158-447 1-280 (305)
184 cd07830 STKc_MAK_like Catalyti 100.0 3.9E-40 8.4E-45 341.4 26.1 279 160-443 1-283 (283)
185 cd06628 STKc_MAPKKK_Byr2_like 100.0 3.3E-40 7.2E-45 339.0 25.4 255 159-443 1-267 (267)
186 cd06611 STKc_SLK_like Catalyti 100.0 1E-40 2.2E-45 346.0 21.7 259 158-446 5-268 (280)
187 cd06643 STKc_SLK Catalytic dom 100.0 2.2E-40 4.8E-45 344.1 24.1 258 159-446 6-268 (282)
188 cd06645 STKc_MAP4K3 Catalytic 100.0 1E-40 2.3E-45 343.1 21.4 257 158-442 9-267 (267)
189 cd06609 STKc_MST3_like Catalyt 100.0 2.7E-40 5.9E-45 341.7 24.3 257 158-446 1-257 (274)
190 cd06651 STKc_MEKK3 Catalytic d 100.0 3.7E-40 8.1E-45 339.5 25.2 257 159-444 3-265 (266)
191 KOG0668 Casein kinase II, alph 100.0 6.6E-42 1.4E-46 334.2 11.1 279 157-445 37-327 (338)
192 cd06613 STKc_MAP4K3_like Catal 100.0 4.2E-40 9.2E-45 336.5 24.8 257 158-442 3-262 (262)
193 cd08221 STKc_Nek9 Catalytic do 100.0 1E-39 2.2E-44 333.4 27.3 254 159-443 1-256 (256)
194 cd06637 STKc_TNIK Catalytic do 100.0 3.1E-40 6.7E-45 340.2 23.3 255 158-443 6-272 (272)
195 cd06631 STKc_YSK4 Catalytic do 100.0 5.5E-40 1.2E-44 337.4 25.0 256 159-443 1-265 (265)
196 cd08220 STKc_Nek8 Catalytic do 100.0 1E-39 2.2E-44 332.5 26.4 253 159-443 1-256 (256)
197 cd06654 STKc_PAK1 Catalytic do 100.0 5.3E-40 1.1E-44 345.1 25.0 257 158-446 20-276 (296)
198 cd06630 STKc_MEKK1 Catalytic d 100.0 3.6E-40 7.7E-45 338.6 22.7 260 159-444 1-268 (268)
199 cd08218 STKc_Nek1 Catalytic do 100.0 9.9E-40 2.2E-44 333.4 25.5 254 159-443 1-256 (256)
200 cd06655 STKc_PAK2 Catalytic do 100.0 8.1E-40 1.8E-44 344.0 25.4 257 158-446 19-275 (296)
201 cd08217 STKc_Nek2 Catalytic do 100.0 1.1E-39 2.3E-44 332.8 25.5 255 159-443 1-265 (265)
202 KOG0586 Serine/threonine prote 100.0 7.8E-41 1.7E-45 365.5 17.6 260 155-446 53-312 (596)
203 cd06626 STKc_MEKK4 Catalytic d 100.0 1.9E-39 4.2E-44 332.0 27.0 259 159-443 1-264 (264)
204 KOG0664 Nemo-like MAPK-related 100.0 3.9E-42 8.5E-47 342.7 6.6 286 160-446 55-349 (449)
205 cd06656 STKc_PAK3 Catalytic do 100.0 6.5E-40 1.4E-44 344.6 23.7 257 158-446 19-275 (297)
206 cd06652 STKc_MEKK2 Catalytic d 100.0 1.9E-39 4.1E-44 333.8 26.6 258 158-444 2-265 (265)
207 KOG0665 Jun-N-terminal kinase 100.0 1.9E-41 4.1E-46 345.3 11.3 282 158-446 17-316 (369)
208 cd06632 STKc_MEKK1_plant Catal 100.0 1.6E-39 3.4E-44 331.1 25.3 255 159-443 1-258 (258)
209 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.2E-39 2.6E-44 336.1 24.7 261 159-443 2-272 (272)
210 cd05578 STKc_Yank1 Catalytic d 100.0 5.9E-40 1.3E-44 335.8 22.1 253 159-443 1-258 (258)
211 cd06607 STKc_TAO Catalytic dom 100.0 1.7E-39 3.7E-44 342.5 25.6 255 159-446 16-273 (307)
212 cd06608 STKc_myosinIII_like Ca 100.0 1.7E-39 3.8E-44 333.4 25.0 258 156-443 4-275 (275)
213 cd06639 STKc_myosinIIIB Cataly 100.0 3E-39 6.5E-44 337.2 27.1 258 157-444 21-291 (291)
214 KOG0596 Dual specificity; seri 100.0 7.5E-41 1.6E-45 359.9 15.2 261 158-448 361-635 (677)
215 cd06658 STKc_PAK5 Catalytic do 100.0 6.4E-40 1.4E-44 344.1 21.9 259 159-449 23-281 (292)
216 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.4E-39 3E-44 337.8 24.0 255 158-443 16-282 (282)
217 KOG4236 Serine/threonine prote 100.0 2.2E-41 4.7E-46 360.6 10.6 251 164-446 570-825 (888)
218 cd06612 STKc_MST1_2 Catalytic 100.0 9.1E-40 2E-44 332.9 21.9 253 158-443 3-256 (256)
219 KOG0983 Mitogen-activated prot 100.0 3.5E-40 7.7E-45 329.2 18.3 261 156-446 90-355 (391)
220 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.7E-39 3.7E-44 335.3 23.8 251 158-439 5-260 (266)
221 cd06638 STKc_myosinIIIA Cataly 100.0 3.1E-39 6.8E-44 335.4 25.7 261 153-443 13-286 (286)
222 cd05572 STKc_cGK_PKG Catalytic 100.0 2.5E-39 5.4E-44 332.0 24.5 250 166-446 1-258 (262)
223 KOG0670 U4/U6-associated splic 100.0 8.1E-41 1.8E-45 356.4 13.7 291 140-445 421-751 (752)
224 cd05633 STKc_GRK3 Catalytic do 100.0 2E-39 4.4E-44 337.8 23.7 251 165-447 1-262 (279)
225 cd06605 PKc_MAPKK Catalytic do 100.0 9.4E-40 2E-44 334.9 20.1 255 159-446 2-263 (265)
226 cd06616 PKc_MKK4 Catalytic dom 100.0 1.2E-39 2.6E-44 339.2 21.1 261 158-445 4-272 (288)
227 cd06917 STKc_NAK1_like Catalyt 100.0 2.7E-39 5.8E-44 334.4 22.9 257 159-446 2-261 (277)
228 cd05577 STKc_GRK Catalytic dom 100.0 2E-39 4.4E-44 336.4 22.0 254 166-448 1-262 (277)
229 PHA02988 hypothetical protein; 100.0 4.3E-39 9.3E-44 336.8 24.5 243 164-439 26-274 (283)
230 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2E-39 4.4E-44 337.6 21.9 264 157-446 4-272 (284)
231 cd08225 STKc_Nek5 Catalytic do 100.0 4.1E-39 8.8E-44 328.3 23.5 254 159-443 1-257 (257)
232 cd05581 STKc_PDK1 Catalytic do 100.0 2.9E-39 6.2E-44 333.1 22.5 255 158-443 1-280 (280)
233 cd06659 STKc_PAK6 Catalytic do 100.0 2.1E-39 4.6E-44 340.9 21.5 259 159-449 22-280 (297)
234 cd08215 STKc_Nek Catalytic dom 100.0 9.4E-39 2E-43 324.0 25.5 254 159-443 1-258 (258)
235 cd05606 STKc_beta_ARK Catalyti 100.0 5.9E-39 1.3E-43 333.9 24.4 253 165-447 1-262 (278)
236 cd05048 PTKc_Ror Catalytic Dom 100.0 4E-39 8.7E-44 334.1 23.0 252 158-440 5-279 (283)
237 cd06633 STKc_TAO3 Catalytic do 100.0 1.2E-38 2.6E-43 337.6 27.1 255 159-446 22-279 (313)
238 cd05096 PTKc_DDR1 Catalytic do 100.0 6.9E-39 1.5E-43 337.1 24.9 258 158-439 5-300 (304)
239 cd06623 PKc_MAPKK_plant_like C 100.0 8.6E-39 1.9E-43 326.8 24.9 255 159-445 2-261 (264)
240 cd06627 STKc_Cdc7_like Catalyt 100.0 1.7E-38 3.6E-43 322.3 26.8 254 159-443 1-254 (254)
241 cd06640 STKc_MST4 Catalytic do 100.0 6.2E-39 1.3E-43 332.7 23.8 255 159-446 5-259 (277)
242 cd08219 STKc_Nek3 Catalytic do 100.0 1.1E-38 2.4E-43 325.8 25.3 250 159-440 1-252 (255)
243 cd06648 STKc_PAK_II Catalytic 100.0 1.1E-38 2.5E-43 333.0 25.7 257 159-447 20-276 (285)
244 cd05611 STKc_Rim15_like Cataly 100.0 6.4E-39 1.4E-43 328.5 23.2 251 164-446 2-257 (260)
245 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.7E-38 3.7E-43 331.4 26.7 262 158-446 1-272 (287)
246 cd06635 STKc_TAO1 Catalytic do 100.0 1.2E-38 2.6E-43 338.1 25.8 255 159-446 26-283 (317)
247 cd06653 STKc_MEKK3_like_1 Cata 100.0 2E-38 4.4E-43 326.3 26.4 257 158-443 2-264 (264)
248 cd05579 STKc_MAST_like Catalyt 100.0 5.8E-39 1.3E-43 327.3 22.2 252 166-446 1-263 (265)
249 cd05054 PTKc_VEGFR Catalytic d 100.0 3.6E-39 7.7E-44 346.2 21.5 254 158-440 7-329 (337)
250 cd08226 PK_STRAD_beta Pseudoki 100.0 4.2E-39 9E-44 343.2 21.6 282 164-446 4-314 (328)
251 KOG0197 Tyrosine kinases [Sign 100.0 1.7E-39 3.8E-44 351.3 18.3 255 149-438 198-455 (468)
252 cd05610 STKc_MASTL Catalytic d 100.0 1.5E-38 3.3E-43 370.5 27.5 149 157-306 3-152 (669)
253 cd05052 PTKc_Abl Catalytic dom 100.0 1.6E-38 3.4E-43 326.9 24.4 249 159-440 7-258 (263)
254 cd06634 STKc_TAO2 Catalytic do 100.0 1.3E-38 2.8E-43 336.5 24.3 256 158-446 15-273 (308)
255 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.7E-38 3.7E-43 325.0 24.3 248 158-439 4-253 (256)
256 cd06606 STKc_MAPKKK Catalytic 100.0 3.4E-38 7.4E-43 319.3 26.2 258 159-443 1-260 (260)
257 cd05072 PTKc_Lyn Catalytic dom 100.0 1.4E-38 3.1E-43 326.1 23.6 249 157-439 5-256 (261)
258 cd06624 STKc_ASK Catalytic dom 100.0 2.5E-38 5.4E-43 325.9 25.4 255 159-443 9-268 (268)
259 cd05106 PTKc_CSF-1R Catalytic 100.0 6.2E-39 1.3E-43 349.3 21.9 252 158-439 38-367 (374)
260 KOG0608 Warts/lats-like serine 100.0 8E-40 1.7E-44 354.6 14.4 260 159-447 630-935 (1034)
261 KOG0614 cGMP-dependent protein 100.0 1.4E-40 3E-45 353.9 8.4 263 155-448 417-685 (732)
262 cd06641 STKc_MST3 Catalytic do 100.0 2E-38 4.4E-43 328.8 24.4 255 159-446 5-259 (277)
263 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.7E-39 5.9E-44 335.1 17.8 254 159-445 5-258 (277)
264 cd08530 STKc_CNK2-like Catalyt 100.0 2E-38 4.3E-43 322.6 23.8 252 159-443 1-256 (256)
265 KOG4279 Serine/threonine prote 100.0 1.9E-39 4.1E-44 354.1 17.0 252 165-446 582-838 (1226)
266 cd08216 PK_STRAD Pseudokinase 100.0 1.2E-38 2.7E-43 336.1 22.8 274 170-446 12-301 (314)
267 PHA03390 pk1 serine/threonine- 100.0 1.5E-38 3.3E-43 329.2 22.8 247 159-445 15-267 (267)
268 cd05122 PKc_STE Catalytic doma 100.0 5E-38 1.1E-42 316.8 26.0 252 159-442 1-253 (253)
269 cd06647 STKc_PAK_I Catalytic d 100.0 1.1E-38 2.4E-43 334.6 22.0 257 158-446 19-275 (293)
270 cd08228 STKc_Nek6 Catalytic do 100.0 3.4E-38 7.3E-43 324.1 25.0 254 158-440 2-261 (267)
271 cd05035 PTKc_Axl_like Catalyti 100.0 2.9E-38 6.3E-43 324.8 24.5 252 160-440 1-268 (273)
272 cd05613 STKc_MSK1_N N-terminal 100.0 2.4E-38 5.2E-43 330.2 23.9 262 159-446 1-274 (290)
273 cd05049 PTKc_Trk Catalytic dom 100.0 1.6E-38 3.5E-43 328.7 22.3 251 158-439 5-276 (280)
274 KOG1989 ARK protein kinase fam 100.0 2.1E-39 4.6E-44 367.2 16.8 251 159-442 38-309 (738)
275 cd05104 PTKc_Kit Catalytic dom 100.0 1.5E-38 3.2E-43 346.4 22.5 253 158-440 35-370 (375)
276 cd05084 PTKc_Fes Catalytic dom 100.0 3.5E-38 7.7E-43 321.5 23.9 245 164-439 1-248 (252)
277 cd05090 PTKc_Ror1 Catalytic do 100.0 3.6E-38 7.8E-43 327.7 24.1 252 158-440 5-279 (283)
278 cd05061 PTKc_InsR Catalytic do 100.0 5.2E-38 1.1E-42 327.9 25.1 259 157-446 5-286 (288)
279 cd05108 PTKc_EGFR Catalytic do 100.0 3.5E-38 7.6E-43 334.1 23.9 252 157-440 6-264 (316)
280 cd06657 STKc_PAK4 Catalytic do 100.0 3.5E-38 7.6E-43 331.2 23.1 257 160-448 22-278 (292)
281 cd05068 PTKc_Frk_like Catalyti 100.0 8.8E-38 1.9E-42 320.6 25.4 248 158-439 6-256 (261)
282 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 5.3E-38 1.2E-42 322.1 23.6 247 158-439 6-255 (260)
283 cd05033 PTKc_EphR Catalytic do 100.0 8.4E-38 1.8E-42 321.7 25.1 252 158-440 4-261 (266)
284 cd05062 PTKc_IGF-1R Catalytic 100.0 5.1E-38 1.1E-42 325.5 23.6 253 157-440 5-274 (277)
285 KOG1035 eIF-2alpha kinase GCN2 100.0 1.5E-39 3.2E-44 374.9 13.3 261 155-444 476-875 (1351)
286 cd05075 PTKc_Axl Catalytic dom 100.0 6.5E-38 1.4E-42 322.9 24.2 251 161-440 2-267 (272)
287 cd05116 PTKc_Syk Catalytic dom 100.0 5E-38 1.1E-42 322.1 23.1 244 165-439 2-250 (257)
288 cd05071 PTKc_Src Catalytic dom 100.0 7.5E-38 1.6E-42 322.3 24.4 247 158-439 6-255 (262)
289 cd05059 PTKc_Tec_like Catalyti 100.0 4.9E-38 1.1E-42 321.9 22.7 248 159-440 5-254 (256)
290 cd06618 PKc_MKK7 Catalytic dom 100.0 7.1E-38 1.5E-42 328.2 24.2 261 156-446 13-279 (296)
291 cd05113 PTKc_Btk_Bmx Catalytic 100.0 6.6E-38 1.4E-42 321.6 23.3 249 158-440 4-254 (256)
292 cd05093 PTKc_TrkB Catalytic do 100.0 6.9E-38 1.5E-42 327.0 23.8 250 158-439 5-274 (288)
293 KOG0603 Ribosomal protein S6 k 100.0 4.1E-39 8.9E-44 353.6 14.9 248 155-446 319-569 (612)
294 cd05091 PTKc_Ror2 Catalytic do 100.0 3.8E-38 8.3E-43 327.1 20.9 252 158-440 5-279 (283)
295 cd05088 PTKc_Tie2 Catalytic do 100.0 8.1E-38 1.8E-42 329.6 23.7 251 157-440 6-276 (303)
296 cd00192 PTKc Catalytic domain 100.0 1.2E-37 2.5E-42 316.7 23.9 246 164-440 1-260 (262)
297 cd05053 PTKc_FGFR Catalytic do 100.0 1.2E-37 2.7E-42 325.0 24.5 252 158-440 12-287 (293)
298 cd05051 PTKc_DDR Catalytic dom 100.0 8.8E-38 1.9E-42 326.2 23.4 258 158-439 5-292 (296)
299 cd05036 PTKc_ALK_LTK Catalytic 100.0 8.7E-38 1.9E-42 324.1 23.2 252 158-440 6-274 (277)
300 cd05032 PTKc_InsR_like Catalyt 100.0 1.5E-37 3.2E-42 321.1 24.6 252 157-439 5-273 (277)
301 cd06614 STKc_PAK Catalytic dom 100.0 8.6E-38 1.9E-42 325.3 22.7 258 157-446 18-276 (286)
302 cd05109 PTKc_HER2 Catalytic do 100.0 1.7E-37 3.8E-42 321.9 24.9 251 157-439 6-263 (279)
303 cd08229 STKc_Nek7 Catalytic do 100.0 7.6E-38 1.6E-42 321.5 21.9 252 158-439 2-260 (267)
304 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.8E-37 3.9E-42 318.1 24.6 247 158-439 6-255 (260)
305 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.5E-37 7.7E-42 315.8 26.6 252 158-439 2-260 (267)
306 cd05089 PTKc_Tie1 Catalytic do 100.0 1.4E-37 3.1E-42 326.3 24.2 250 158-440 2-271 (297)
307 cd05148 PTKc_Srm_Brk Catalytic 100.0 7E-38 1.5E-42 320.6 21.1 249 157-439 5-256 (261)
308 cd05583 STKc_MSK_N N-terminal 100.0 1.4E-37 3.1E-42 324.0 23.5 264 159-448 1-274 (288)
309 cd05034 PTKc_Src_like Catalyti 100.0 3.1E-37 6.6E-42 315.9 25.2 249 157-439 5-256 (261)
310 KOG0584 Serine/threonine prote 100.0 7.5E-39 1.6E-43 350.3 14.0 253 161-446 43-302 (632)
311 cd05123 STKc_AGC Catalytic dom 100.0 1.9E-37 4.1E-42 314.7 23.2 246 166-443 1-250 (250)
312 KOG1290 Serine/threonine prote 100.0 1.3E-37 2.9E-42 330.9 22.6 283 158-449 78-559 (590)
313 PLN03225 Serine/threonine-prot 100.0 6E-37 1.3E-41 349.9 29.6 277 156-447 130-457 (566)
314 cd05069 PTKc_Yes Catalytic dom 100.0 3.1E-37 6.8E-42 316.7 24.5 247 158-439 6-255 (260)
315 PRK13184 pknD serine/threonine 100.0 1.9E-37 4.2E-42 362.9 25.7 255 158-440 2-285 (932)
316 KOG4645 MAPKKK (MAP kinase kin 100.0 9.8E-40 2.1E-44 377.7 5.7 259 159-446 1236-1500(1509)
317 cd05066 PTKc_EphR_A Catalytic 100.0 3E-37 6.6E-42 318.0 23.6 251 158-439 4-261 (267)
318 cd05063 PTKc_EphR_A2 Catalytic 100.0 4.2E-37 9E-42 316.5 24.5 251 158-439 5-262 (268)
319 cd05060 PTKc_Syk_like Catalyti 100.0 3.4E-37 7.5E-42 315.5 23.7 244 164-439 1-250 (257)
320 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.8E-37 3.8E-42 333.3 22.2 254 158-440 7-335 (343)
321 cd05112 PTKc_Itk Catalytic dom 100.0 4.5E-37 9.8E-42 313.8 24.1 249 158-440 4-254 (256)
322 cd05082 PTKc_Csk Catalytic dom 100.0 3.9E-37 8.5E-42 314.9 23.4 243 158-439 6-251 (256)
323 cd05111 PTK_HER3 Pseudokinase 100.0 4.2E-37 9.2E-42 319.9 24.0 251 157-439 6-263 (279)
324 KOG0193 Serine/threonine prote 100.0 2.3E-38 4.9E-43 344.5 14.9 253 158-439 392-648 (678)
325 cd05055 PTKc_PDGFR Catalytic d 100.0 4.1E-37 8.8E-42 324.4 24.0 252 158-439 35-296 (302)
326 cd05094 PTKc_TrkC Catalytic do 100.0 4E-37 8.7E-42 321.7 23.7 250 158-439 5-277 (291)
327 smart00219 TyrKc Tyrosine kina 100.0 4.9E-37 1.1E-41 312.3 23.7 249 160-439 1-256 (258)
328 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 5.6E-37 1.2E-41 318.7 24.6 264 159-439 4-276 (283)
329 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.2E-37 7E-42 339.0 24.0 253 157-439 36-392 (400)
330 cd08222 STKc_Nek11 Catalytic d 100.0 3.2E-37 6.9E-42 316.0 22.2 253 159-443 1-260 (260)
331 cd05092 PTKc_TrkA Catalytic do 100.0 4.5E-37 9.7E-42 319.6 23.4 250 158-439 5-276 (280)
332 cd05097 PTKc_DDR_like Catalyti 100.0 3.5E-37 7.6E-42 322.8 22.7 258 158-439 5-291 (295)
333 cd05085 PTKc_Fer Catalytic dom 100.0 8.2E-37 1.8E-41 310.7 24.7 245 164-440 1-247 (250)
334 cd05046 PTK_CCK4 Pseudokinase 100.0 5.2E-37 1.1E-41 317.0 23.5 253 158-440 5-272 (275)
335 cd05098 PTKc_FGFR1 Catalytic d 100.0 4.7E-37 1E-41 323.9 23.4 252 158-440 18-295 (307)
336 cd05065 PTKc_EphR_B Catalytic 100.0 8E-37 1.7E-41 314.9 24.2 251 158-439 4-263 (269)
337 KOG0695 Serine/threonine prote 100.0 5.4E-38 1.2E-42 320.1 15.0 262 156-448 248-524 (593)
338 cd05045 PTKc_RET Catalytic dom 100.0 6.6E-37 1.4E-41 319.6 23.5 250 159-439 1-281 (290)
339 cd05056 PTKc_FAK Catalytic dom 100.0 1.1E-36 2.4E-41 314.1 24.9 251 158-440 6-261 (270)
340 cd05101 PTKc_FGFR2 Catalytic d 100.0 7E-37 1.5E-41 321.9 23.8 253 157-440 14-292 (304)
341 cd05073 PTKc_Hck Catalytic dom 100.0 1.3E-36 2.9E-41 312.0 25.4 247 158-439 6-255 (260)
342 cd05041 PTKc_Fes_like Catalyti 100.0 8E-37 1.7E-41 311.0 23.4 244 164-439 1-247 (251)
343 cd05099 PTKc_FGFR4 Catalytic d 100.0 9.5E-37 2.1E-41 322.9 24.8 251 158-439 12-288 (314)
344 cd05043 PTK_Ryk Pseudokinase d 100.0 8.6E-37 1.9E-41 316.5 23.8 253 157-439 5-271 (280)
345 cd05050 PTKc_Musk Catalytic do 100.0 7.2E-37 1.6E-41 318.7 23.2 251 158-439 5-284 (288)
346 cd05039 PTKc_Csk_like Catalyti 100.0 1.1E-36 2.4E-41 311.2 24.1 243 158-439 6-251 (256)
347 cd05040 PTKc_Ack_like Catalyti 100.0 8.6E-37 1.9E-41 311.9 23.2 245 164-439 1-253 (257)
348 cd05115 PTKc_Zap-70 Catalytic 100.0 1.2E-36 2.6E-41 312.7 23.8 243 165-439 2-250 (257)
349 PF07714 Pkinase_Tyr: Protein 100.0 8.6E-37 1.9E-41 314.7 22.3 248 161-439 2-257 (259)
350 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 8.5E-37 1.8E-41 317.9 22.4 266 159-440 5-279 (284)
351 cd05058 PTKc_Met_Ron Catalytic 100.0 1.3E-36 2.9E-41 311.3 23.4 247 164-440 1-255 (262)
352 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.2E-36 7E-41 312.9 25.1 267 158-439 4-278 (284)
353 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.8E-36 4E-41 323.6 23.5 252 158-440 12-289 (334)
354 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.5E-36 3.3E-41 313.1 22.1 239 164-440 1-260 (262)
355 cd05095 PTKc_DDR2 Catalytic do 100.0 2.4E-36 5.2E-41 316.6 23.8 258 158-439 5-292 (296)
356 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 6.4E-37 1.4E-41 314.4 18.4 239 164-440 1-256 (258)
357 cd05057 PTKc_EGFR_like Catalyt 100.0 4.5E-36 9.8E-41 311.3 24.9 250 158-439 7-263 (279)
358 cd05047 PTKc_Tie Catalytic dom 100.0 2.7E-36 5.8E-41 311.8 22.6 242 165-439 2-263 (270)
359 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2.2E-36 4.7E-41 314.2 21.8 238 165-440 2-272 (274)
360 KOG4721 Serine/threonine prote 100.0 6.6E-38 1.4E-42 336.7 10.1 240 160-441 126-365 (904)
361 cd08528 STKc_Nek10 Catalytic d 100.0 4.6E-36 1E-40 308.9 23.4 251 159-440 1-266 (269)
362 cd05107 PTKc_PDGFR_beta Cataly 100.0 3E-36 6.6E-41 331.3 23.4 253 158-440 37-395 (401)
363 cd05042 PTKc_Aatyk Catalytic d 100.0 3.8E-36 8.3E-41 309.8 22.8 250 164-439 1-265 (269)
364 cd05576 STKc_RPK118_like Catal 100.0 7.4E-37 1.6E-41 310.8 16.9 229 169-443 4-237 (237)
365 KOG2345 Serine/threonine prote 100.0 5E-37 1.1E-41 303.6 14.5 257 157-440 20-296 (302)
366 cd05110 PTKc_HER4 Catalytic do 100.0 6.1E-36 1.3E-40 315.1 23.2 252 157-440 6-264 (303)
367 cd05074 PTKc_Tyro3 Catalytic d 100.0 5.8E-36 1.3E-40 308.5 22.5 252 160-440 1-268 (273)
368 KOG0587 Traf2- and Nck-interac 100.0 5.5E-36 1.2E-40 336.6 23.8 264 153-446 14-288 (953)
369 cd05044 PTKc_c-ros Catalytic d 100.0 4.2E-36 9E-41 308.9 20.9 245 164-439 1-265 (269)
370 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1E-35 2.3E-40 306.9 23.6 250 164-439 1-265 (269)
371 cd05083 PTKc_Chk Catalytic dom 100.0 7.5E-36 1.6E-40 305.1 22.0 241 158-439 6-249 (254)
372 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 5.7E-36 1.2E-40 305.5 20.8 236 164-439 1-256 (259)
373 PHA02882 putative serine/threo 100.0 2E-35 4.2E-40 310.4 25.3 259 158-439 12-291 (294)
374 KOG1187 Serine/threonine prote 100.0 1.1E-35 2.5E-40 321.6 22.9 261 157-439 74-347 (361)
375 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.6E-35 3.5E-40 306.2 22.6 263 158-439 4-278 (284)
376 KOG1151 Tousled-like protein k 100.0 3.8E-37 8.3E-42 322.8 9.8 265 155-445 460-746 (775)
377 cd05086 PTKc_Aatyk2 Catalytic 100.0 6.4E-35 1.4E-39 301.5 23.9 249 165-439 2-264 (268)
378 KOG1006 Mitogen-activated prot 100.0 2.1E-37 4.5E-42 308.5 3.5 264 156-446 62-333 (361)
379 KOG0194 Protein tyrosine kinas 100.0 1.6E-35 3.5E-40 324.6 18.4 254 156-439 155-415 (474)
380 KOG4250 TANK binding protein k 100.0 9E-36 2E-40 329.6 12.5 201 159-362 14-226 (732)
381 smart00220 S_TKc Serine/Threon 100.0 9.2E-34 2E-38 283.2 22.6 244 170-443 1-244 (244)
382 PLN03224 probable serine/threo 100.0 5E-34 1.1E-38 319.8 22.8 274 156-445 143-505 (507)
383 KOG1167 Serine/threonine prote 100.0 5.8E-35 1.3E-39 307.6 12.5 282 156-445 34-386 (418)
384 KOG1095 Protein tyrosine kinas 100.0 4.7E-34 1E-38 332.6 21.3 252 157-439 691-956 (1025)
385 KOG1026 Nerve growth factor re 100.0 1.5E-34 3.3E-39 326.5 15.6 249 159-438 487-756 (774)
386 KOG0576 Mitogen-activated prot 100.0 4.5E-34 9.7E-39 312.8 7.1 259 158-444 15-275 (829)
387 KOG1094 Discoidin domain recep 100.0 3.3E-32 7.2E-37 294.2 19.3 257 158-439 538-799 (807)
388 KOG0196 Tyrosine kinase, EPH ( 100.0 5.7E-33 1.2E-37 308.3 13.4 251 159-440 630-887 (996)
389 KOG1027 Serine/threonine prote 100.0 5.1E-33 1.1E-37 311.5 10.6 250 160-446 511-773 (903)
390 KOG0984 Mitogen-activated prot 100.0 1.2E-32 2.5E-37 266.2 11.1 214 157-374 45-267 (282)
391 KOG4257 Focal adhesion tyrosin 100.0 2.3E-32 4.9E-37 296.7 13.8 247 161-439 392-644 (974)
392 KOG4278 Protein tyrosine kinas 100.0 4.9E-32 1.1E-36 293.3 16.3 256 150-439 260-518 (1157)
393 PLN00113 leucine-rich repeat r 100.0 1.9E-31 4.2E-36 323.3 21.4 252 159-440 691-947 (968)
394 KOG0199 ACK and related non-re 100.0 7.3E-32 1.6E-36 295.9 13.5 249 159-439 111-367 (1039)
395 KOG1152 Signal transduction se 100.0 8.2E-32 1.8E-36 291.0 11.0 204 154-362 557-771 (772)
396 cd00180 PKc Catalytic domain o 100.0 5.4E-29 1.2E-33 241.7 21.8 213 166-441 1-215 (215)
397 KOG3653 Transforming growth fa 100.0 8E-30 1.7E-34 271.3 13.7 262 158-435 210-494 (534)
398 smart00221 STYKc Protein kinas 100.0 1.3E-28 2.8E-33 244.5 21.6 212 160-373 1-215 (225)
399 KOG0200 Fibroblast/platelet-de 100.0 1.1E-28 2.3E-33 284.5 22.1 249 160-439 298-574 (609)
400 PLN00181 protein SPA1-RELATED; 100.0 5.6E-30 1.2E-34 304.5 9.9 204 212-446 27-271 (793)
401 KOG2052 Activin A type IB rece 100.0 1.2E-28 2.5E-33 260.8 17.4 250 158-438 211-497 (513)
402 KOG1025 Epidermal growth facto 100.0 2.6E-28 5.6E-33 272.0 13.6 250 158-439 696-952 (1177)
403 KOG1345 Serine/threonine kinas 99.9 4.4E-28 9.6E-33 242.6 7.8 245 157-431 23-275 (378)
404 COG0515 SPS1 Serine/threonine 99.9 1.7E-25 3.7E-30 228.4 24.6 263 160-446 2-281 (384)
405 KOG0590 Checkpoint kinase and 99.9 1.7E-27 3.6E-32 272.5 6.7 264 161-446 321-591 (601)
406 smart00750 KIND kinase non-cat 99.9 1.1E-26 2.3E-31 224.7 11.3 166 242-444 1-169 (176)
407 PRK09188 serine/threonine prot 99.9 3.1E-25 6.7E-30 239.6 18.3 165 156-332 16-193 (365)
408 KOG0603 Ribosomal protein S6 k 99.9 3.3E-26 7.2E-31 252.1 4.0 243 165-449 1-252 (612)
409 KOG1024 Receptor-like protein 99.9 1.6E-24 3.4E-29 225.9 13.2 252 158-439 284-550 (563)
410 KOG1164 Casein kinase (serine/ 99.9 1.7E-22 3.8E-27 216.0 22.4 210 159-371 19-248 (322)
411 KOG0606 Microtubule-associated 99.9 5.3E-24 1.1E-28 244.4 10.5 226 156-448 81-323 (1205)
412 cd05147 RIO1_euk RIO kinase fa 99.9 1.5E-22 3.3E-27 200.5 11.6 141 163-308 2-167 (190)
413 PRK10359 lipopolysaccharide co 99.9 7.4E-22 1.6E-26 200.0 12.8 172 158-354 31-216 (232)
414 KOG1163 Casein kinase (serine/ 99.9 1.8E-21 3.9E-26 192.6 14.5 208 157-370 14-231 (341)
415 cd05145 RIO1_like RIO kinase f 99.9 1.4E-21 3E-26 193.3 13.8 141 163-309 2-168 (190)
416 PF14531 Kinase-like: Kinase-l 99.9 1.6E-21 3.5E-26 203.1 13.3 236 159-431 13-288 (288)
417 KOG1165 Casein kinase (serine/ 99.9 1.9E-21 4.2E-26 199.8 12.5 208 159-372 29-251 (449)
418 KOG1240 Protein kinase contain 99.9 5.9E-22 1.3E-26 227.7 8.2 249 159-440 24-291 (1431)
419 PRK12274 serine/threonine prot 99.8 1.7E-20 3.6E-25 186.9 15.1 190 161-364 5-211 (218)
420 KOG4158 BRPK/PTEN-induced prot 99.8 9.1E-21 2E-25 198.5 10.6 256 155-439 154-512 (598)
421 KOG1033 eIF-2alpha kinase PEK/ 99.8 1.4E-21 3.1E-26 212.1 3.2 176 233-443 331-515 (516)
422 smart00090 RIO RIO-like kinase 99.8 2.2E-19 4.7E-24 184.1 12.5 145 159-309 29-199 (237)
423 PRK10345 hypothetical protein; 99.8 4.8E-19 1E-23 178.1 14.0 137 161-305 5-156 (210)
424 KOG0590 Checkpoint kinase and 99.8 3E-20 6.5E-25 213.0 -1.0 262 159-445 21-291 (601)
425 PRK14879 serine/threonine prot 99.8 6.5E-18 1.4E-22 168.6 13.2 137 164-308 2-144 (211)
426 KOG1166 Mitotic checkpoint ser 99.7 4.3E-18 9.3E-23 199.7 12.3 194 157-358 697-901 (974)
427 KOG0195 Integrin-linked kinase 99.7 1.6E-18 3.5E-23 174.0 7.1 248 155-438 187-440 (448)
428 cd05144 RIO2_C RIO kinase fami 99.7 1.3E-17 2.8E-22 165.7 13.2 140 159-310 16-177 (198)
429 TIGR03724 arch_bud32 Kae1-asso 99.7 6.4E-17 1.4E-21 160.1 11.5 133 165-308 1-139 (199)
430 cd05119 RIO RIO kinase family, 99.7 1.4E-16 3E-21 156.0 12.3 138 163-309 2-165 (187)
431 PRK09605 bifunctional UGMP fam 99.7 3.9E-16 8.5E-21 178.2 14.8 138 159-308 334-477 (535)
432 PRK01723 3-deoxy-D-manno-octul 99.6 2.2E-15 4.7E-20 154.8 14.4 137 164-307 37-191 (239)
433 KOG1023 Natriuretic peptide re 99.6 1.3E-15 2.7E-20 168.6 10.7 206 211-439 1-219 (484)
434 cd05120 APH_ChoK_like Aminogly 99.6 5.3E-15 1.2E-19 136.9 12.5 133 162-308 2-139 (155)
435 KOG0601 Cyclin-dependent kinas 99.6 1.2E-15 2.5E-20 169.0 6.2 255 158-445 114-384 (524)
436 KOG0606 Microtubule-associated 99.5 1.5E-15 3.2E-20 175.6 2.7 265 156-449 802-1101(1205)
437 TIGR01982 UbiB 2-polyprenylphe 99.4 1.8E-12 3.9E-17 144.4 12.3 143 164-310 123-309 (437)
438 KOG0601 Cyclin-dependent kinas 99.4 3.3E-13 7.2E-18 149.7 6.4 257 151-444 258-518 (524)
439 PRK04750 ubiB putative ubiquin 99.4 3.8E-13 8.2E-18 152.1 7.0 144 159-310 121-316 (537)
440 cd05146 RIO3_euk RIO kinase fa 99.4 3.1E-12 6.7E-17 127.1 12.1 140 164-309 3-175 (197)
441 cd05151 ChoK Choline Kinase (C 99.4 3.2E-12 7E-17 122.7 11.1 128 163-307 3-136 (170)
442 KOG1243 Protein kinase [Genera 99.3 5.3E-11 1.1E-15 133.6 14.8 184 160-356 15-199 (690)
443 KOG1266 Protein kinase [Signal 99.2 1.4E-12 3.1E-17 134.8 -1.0 238 173-444 81-335 (458)
444 cd05154 ACAD10_11_like Acyl-Co 99.2 2.8E-10 6.2E-15 113.5 13.0 141 164-307 4-206 (223)
445 KOG3741 Poly(A) ribonuclease s 99.1 1.5E-09 3.2E-14 118.8 16.3 214 171-440 289-521 (655)
446 KOG3087 Serine/threonine prote 99.0 2.3E-09 5E-14 103.9 12.5 143 162-307 11-165 (229)
447 COG3642 Mn2+-dependent serine/ 99.0 1.8E-09 3.8E-14 105.1 11.5 131 164-307 2-140 (204)
448 PF01163 RIO1: RIO1 family; I 99.0 7.4E-09 1.6E-13 102.5 13.9 128 173-309 1-157 (188)
449 KOG2137 Protein kinase [Signal 98.9 5.1E-10 1.1E-14 126.2 4.7 158 265-448 106-273 (700)
450 PRK15123 lipopolysaccharide co 98.9 4.6E-08 9.9E-13 102.2 15.7 131 174-307 38-194 (268)
451 COG0478 RIO-like serine/threon 98.7 9.5E-08 2.1E-12 98.2 11.7 138 160-308 93-252 (304)
452 COG4248 Uncharacterized protei 98.7 7E-07 1.5E-11 96.0 17.4 245 164-436 17-292 (637)
453 KOG0576 Mitogen-activated prot 98.6 7.6E-09 1.6E-13 115.7 1.5 246 160-448 244-492 (829)
454 PF06293 Kdo: Lipopolysacchari 98.6 2.8E-07 6E-12 92.6 12.2 106 203-308 57-171 (206)
455 COG1718 RIO1 Serine/threonine 98.4 3.9E-06 8.4E-11 85.6 14.5 140 163-309 53-217 (268)
456 PF01636 APH: Phosphotransfera 98.4 6E-06 1.3E-10 82.5 15.7 139 163-307 2-197 (239)
457 PRK09902 hypothetical protein; 98.4 5.8E-06 1.2E-10 83.1 13.8 138 167-307 27-179 (216)
458 PF06176 WaaY: Lipopolysacchar 98.3 8.2E-06 1.8E-10 82.4 14.0 139 158-307 31-183 (229)
459 COG0661 AarF Predicted unusual 98.3 3.1E-06 6.8E-11 95.8 10.6 143 164-311 131-318 (517)
460 PF13095 FTA2: Kinetochore Sim 98.2 2.5E-05 5.3E-10 78.0 13.6 128 158-305 37-206 (207)
461 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 1.5E-05 3.3E-10 81.3 12.1 133 164-307 7-182 (226)
462 COG2112 Predicted Ser/Thr prot 98.2 7.3E-06 1.6E-10 79.6 8.7 132 160-308 24-156 (201)
463 KOG1235 Predicted unusual prot 98.1 1.2E-05 2.5E-10 91.0 11.2 143 164-311 167-358 (538)
464 PLN02876 acyl-CoA dehydrogenas 98.1 4.8E-05 1E-09 91.7 15.0 146 162-308 42-258 (822)
465 cd05150 APH Aminoglycoside 3'- 98.0 5E-05 1.1E-09 77.8 12.2 135 165-307 5-193 (244)
466 KOG1035 eIF-2alpha kinase GCN2 97.9 2.5E-05 5.5E-10 93.2 8.7 204 201-446 226-440 (1351)
467 cd05155 APH_ChoK_like_1 Unchar 97.8 0.00014 3E-09 74.3 11.0 31 277-307 164-194 (235)
468 KOG1826 Ras GTPase activating 97.7 4.4E-06 9.5E-11 101.1 -1.6 257 156-444 1227-1496(2724)
469 PF10707 YrbL-PhoP_reg: PhoP r 97.6 0.001 2.2E-08 66.7 12.9 131 163-302 6-166 (199)
470 TIGR00938 thrB_alt homoserine 97.5 0.00091 2E-08 71.1 11.6 142 160-307 24-217 (307)
471 cd05157 ETNK_euk Ethanolamine 97.4 0.001 2.2E-08 67.5 11.3 73 163-243 3-77 (235)
472 TIGR02721 ycfN_thiK thiamine k 97.4 0.00067 1.4E-08 70.1 9.3 132 166-307 4-175 (256)
473 PRK10593 hypothetical protein; 97.4 0.0024 5.3E-08 67.8 13.6 78 160-243 16-98 (297)
474 PRK05231 homoserine kinase; Pr 97.3 0.0033 7.1E-08 67.1 13.9 31 277-307 187-217 (319)
475 PF12260 PIP49_C: Protein-kina 97.3 0.001 2.2E-08 66.1 9.0 100 205-309 7-113 (188)
476 KOG2268 Serine/threonine prote 97.3 0.00028 6E-09 74.6 5.2 137 159-307 93-251 (465)
477 KOG2270 Serine/threonine prote 97.3 0.0035 7.7E-08 67.5 13.0 143 161-308 147-314 (520)
478 cd05153 HomoserineK_II Homoser 97.2 0.0042 9.1E-08 65.4 13.6 140 161-307 17-205 (296)
479 PRK09550 mtnK methylthioribose 97.2 0.0047 1E-07 68.2 14.0 78 162-242 30-115 (401)
480 KOG1093 Predicted protein kina 97.1 0.0013 2.8E-08 73.3 8.3 172 204-446 29-200 (725)
481 cd05156 ChoK_euk Choline Kinas 97.1 0.0029 6.3E-08 66.9 10.9 73 163-243 3-82 (302)
482 COG3173 Predicted aminoglycosi 97.1 0.0068 1.5E-07 64.9 13.2 148 160-310 27-231 (321)
483 cd05152 MPH2' Macrolide 2'-Pho 96.6 0.022 4.8E-07 59.9 12.2 31 278-308 186-217 (276)
484 PLN02236 choline kinase 96.5 0.03 6.5E-07 60.8 13.1 140 160-307 38-231 (344)
485 TIGR02906 spore_CotS spore coa 96.5 0.022 4.8E-07 60.2 11.4 29 277-306 187-215 (313)
486 PLN02421 phosphotransferase, a 96.5 0.031 6.6E-07 60.4 12.5 149 150-307 7-213 (330)
487 PLN02756 S-methyl-5-thioribose 96.1 0.059 1.3E-06 59.7 12.4 76 162-242 36-119 (418)
488 TIGR02904 spore_ysxE spore coa 96.0 0.065 1.4E-06 57.1 12.1 30 278-307 197-226 (309)
489 TIGR01767 MTRK 5-methylthiorib 95.9 0.032 7E-07 60.8 8.9 75 165-242 2-84 (370)
490 PRK12396 5-methylribose kinase 95.7 0.039 8.5E-07 60.8 9.0 77 163-242 34-117 (409)
491 PF03881 Fructosamin_kin: Fruc 95.6 0.12 2.6E-06 54.8 12.0 76 160-243 19-97 (288)
492 PF01633 Choline_kinase: Choli 95.6 0.046 1E-06 54.7 8.3 30 278-307 144-174 (211)
493 PRK06148 hypothetical protein; 95.5 0.23 5.1E-06 61.5 15.8 31 277-307 203-236 (1013)
494 COG5072 ALK1 Serine/threonine 95.5 0.05 1.1E-06 58.8 8.3 85 217-307 285-370 (488)
495 PTZ00384 choline kinase; Provi 95.2 0.17 3.7E-06 55.9 11.7 77 162-244 54-135 (383)
496 PTZ00296 choline kinase; Provi 94.6 0.36 7.7E-06 54.4 12.5 84 151-243 99-191 (442)
497 PRK11768 serine/threonine prot 94.6 0.6 1.3E-05 50.2 13.8 70 169-243 36-112 (325)
498 COG2334 Putative homoserine ki 94.6 0.55 1.2E-05 50.8 13.4 136 164-306 32-227 (331)
499 PF07387 Seadorna_VP7: Seadorn 93.2 0.39 8.4E-06 49.0 8.4 115 169-304 73-189 (308)
500 KOG1236 Predicted unusual prot 91.2 0.49 1.1E-05 52.2 6.7 61 233-294 320-381 (565)
No 1
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.6e-88 Score=718.81 Aligned_cols=432 Identities=64% Similarity=1.054 Sum_probs=388.0
Q ss_pred ceeecCCCCCCccccccCCccccccccccccCCccCCCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHH
Q 006004 120 RIVCLPVGPEGDEVVAGWPSWLTSVAGEAIKGWQPRRADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPE 199 (665)
Q Consensus 120 r~~~~p~~~~g~~~~~~~p~~~~~~~g~~~~~~~~~~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~ 199 (665)
+....+...++..++++||.|+...+|+++.+|.+++.+.|+.+++||+|+||.||+|++..||+.||+|++++.+..++
T Consensus 79 ~~~~~~~~~e~~~~~a~~p~~l~~~~ge~~~~w~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~ 158 (560)
T KOG0600|consen 79 RPSSVPKSTEAEQVAAGWPAWLSSVAGEALHGWGPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEG 158 (560)
T ss_pred CCCCCCCcchhhhhhccCccccccccccccccccccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCc
Confidence 44445556677889999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHhCCCCCcceeeeeeecc-CCcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCC
Q 006004 200 SVRFMAREIHILRKLDHPNVMKLEGLVTSR-SGSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRG 278 (665)
Q Consensus 200 ~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-~~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~g 278 (665)
....+.|||.||++|+|||||+|.+++.+. .+.+|||||||++||..++...+.+|++.++++||+||+.||+|||.+|
T Consensus 159 ~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~g 238 (560)
T KOG0600|consen 159 FPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRG 238 (560)
T ss_pred chHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999887 6799999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCC
Q 006004 279 ILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKP 358 (665)
Q Consensus 279 IiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~ 358 (665)
|+|||||.+|||||++|.+||+|||||+++.......+++.+.|+||+|||+|+|...|+.++|+||+||||.||++|+|
T Consensus 239 vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkP 318 (560)
T KOG0600|consen 239 VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKP 318 (560)
T ss_pred eeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCC
Confidence 99999999999999999999999999999988888889999999999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHH
Q 006004 359 IMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASAL 438 (665)
Q Consensus 359 pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL 438 (665)
+|+|.++++|+++|+++||+|.++||...+++....|++..+|++.+.+.+..++..+++|+..||.+||.+|.||.++|
T Consensus 319 I~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL 398 (560)
T KOG0600|consen 319 ILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSAL 398 (560)
T ss_pred CcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCcCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCcCC-CCCCCCCCC---CCCCc
Q 006004 439 RSEFFKTEPLPCDPSNLPKYPPSKELDAKLRDQEARKQEAEAVRGRGPESVRRGSRDFSAVR-TPEFIPSGQ---SKPTS 514 (665)
Q Consensus 439 ~Hp~f~~~~~~~~p~~~p~~~~~~e~~~~~~~~e~~k~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~ 514 (665)
+|+||++.+.+|+|+.+|.|++.+|++.+.++++.+++...+.+.+......+..+...+.+ .++.....+ ++..+
T Consensus 399 ~seyF~t~p~~~~p~~Lp~y~~s~E~~~K~r~e~~r~~~~~~~~~~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~~n~~~ 478 (560)
T KOG0600|consen 399 QSEYFTTEPLPCDPSSLPKYPPSHELDAKRRREQKRRNKGGASKRRIRERGDRGSRAIPAQPANAESQASPQRRKSNSRS 478 (560)
T ss_pred cCcccccCCCCCCcccCCCCCcchhHHHHHHHHHhhcccccccccccccccccccCCCCCCCCCHHHhccccccccCCcC
Confidence 99999999999999999999999999999999887776633334443333333333333222 233444444 77889
Q ss_pred cCCCCCCCCCCCCCcccCCCCCCCCCcccCCCcccCC
Q 006004 515 ISHKFHNQEDSCSGFRIEPPTVGRQNVNSHSSTAVHP 551 (665)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (665)
.+++|+++.+...||+++|.+.......++.+...++
T Consensus 479 ~s~kf~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 515 (560)
T KOG0600|consen 479 NSEKFPPPEQDGVGFPIGPSRRSQSKGPSRYSGPNSG 515 (560)
T ss_pred cccCCCCccccccCcccCCccccCCCCcccccCCCCc
Confidence 9999998777779999999887644455666444443
No 2
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.8e-60 Score=484.39 Aligned_cols=306 Identities=45% Similarity=0.791 Sum_probs=268.5
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-CCcEE
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-SGSLY 234 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-~~~l~ 234 (665)
..+.|+++.+|++|+||.||+|+++.|++.||+|+++........--.-.|||.+|.+++|||||.+..++... -..+|
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 34579999999999999999999999999999999987653222222346999999999999999999988754 34799
Q ss_pred EEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC
Q 006004 235 LVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL 314 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~ 314 (665)
||||||++|+..++..-..+|.+.++++++.|++.||+|||.+.|+||||||+|+|++..|.+||+|||||+.+... ..
T Consensus 154 ~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp-~k 232 (419)
T KOG0663|consen 154 IVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP-LK 232 (419)
T ss_pred eeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCC-cc
Confidence 99999999999999888889999999999999999999999999999999999999999999999999999998654 45
Q ss_pred CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccccc-
Q 006004 315 PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHAT- 393 (665)
Q Consensus 315 ~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~- 393 (665)
+++..+.|.||+|||++++...|+.++|+||+|||+.|||+++|.|+|..+.+|+.+|++++|.|.+..|.........
T Consensus 233 ~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k 312 (419)
T KOG0663|consen 233 PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVK 312 (419)
T ss_pred cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhh
Confidence 6788899999999999999999999999999999999999999999999999999999999999999999876554432
Q ss_pred -CCCCCCcchhhhhhhccC--CcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCCCCCCCCCCCCCCChH
Q 006004 394 -SFKPQQPYKRKVLETFRN--FPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPLPCDPSNLPKYPPSKE 463 (665)
Q Consensus 394 -~~~~~~p~~~~~~~~~~~--~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~~~~p~~~p~~~~~~e 463 (665)
.-.+..||... ...|.. ++....+|+..||.+||.+|.||.|+|+|.||.+.|.|++|.-+|.+|...+
T Consensus 313 ~~~f~~~pyn~l-r~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P~~~Pt~P~k~~ 384 (419)
T KOG0663|consen 313 KMTFSEHPYNNL-RKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPIDPSMFPTWPAKSE 384 (419)
T ss_pred ccccCCCCchhh-hhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCCChhhcCCCccccc
Confidence 22234444332 223332 6699999999999999999999999999999999999999999999987544
No 3
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=7.6e-60 Score=469.22 Aligned_cols=297 Identities=44% Similarity=0.773 Sum_probs=263.5
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|..+++||+|.||.||+|++.+||+.||||+|+..+..........|||+.|+.++|+||+.|.++|-..+ .+.||+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~-~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKS-NLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCC-ceEEEE
Confidence 4799999999999999999999999999999999887654334445789999999999999999999998866 789999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
|||+.+|...+......|+..+++.|+.+++.||+|||.+.|+||||||.|+||+.+|.+||+|||+|+.+..... ..+
T Consensus 81 Efm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~-~~~ 159 (318)
T KOG0659|consen 81 EFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR-IQT 159 (318)
T ss_pred EeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCc-ccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999875433 344
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccc-cccCCC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSA-HATSFK 396 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~-~~~~~~ 396 (665)
..+.|.||+|||++.|+..|+..+||||+|||+.||+.|.|.|+|.++.||+..|++.+|+|.++-|+..... ....+.
T Consensus 160 ~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~ 239 (318)
T KOG0659|consen 160 HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ 239 (318)
T ss_pred cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHh
Confidence 4589999999999999999999999999999999999999999999999999999999999999999875432 222222
Q ss_pred CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCCCCCCCCCCCC
Q 006004 397 PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPLPCDPSNLPKY 458 (665)
Q Consensus 397 ~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~~~~p~~~p~~ 458 (665)
..|. ......|...++++.||+.+||.+||.+|+|+.|+|+|+||++.|.|+.+..+|..
T Consensus 240 -~~P~-~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~~~~lp~p 299 (318)
T KOG0659|consen 240 -QFPK-PPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPTPPSKLPIP 299 (318)
T ss_pred -cCCC-CccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCCChhhCcCC
Confidence 1221 11223677889999999999999999999999999999999999999988888754
No 4
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-59 Score=498.46 Aligned_cols=287 Identities=39% Similarity=0.702 Sum_probs=257.4
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCC-CCCcceeeeeeeccCCcEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLD-HPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~~l~l 235 (665)
.++|.++++||.|+||.||+|+.+.+|..||||.++..-...+..-. +||+..|++|+ |||||+|.+++.+.+..+|+
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~n-LREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMN-LREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHH-HHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 46899999999999999999999999999999999765544444333 58999999998 99999999999887668999
Q ss_pred EEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 236 VFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 236 V~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
|||||+.+|.+++..++..|++..++.||+||+.||+|+|.+|++||||||||||+.....+||+|||||+.+.. ..+
T Consensus 88 VfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S--kpP 165 (538)
T KOG0661|consen 88 VFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS--KPP 165 (538)
T ss_pred eHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc--CCC
Confidence 999999999999999999999999999999999999999999999999999999999989999999999998754 456
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhh-hccccccC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRK-SKSAHATS 394 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~-~~~~~~~~ 394 (665)
+|.++.|+||+|||+++....|+.++|||++|||++|+++-+|+|+|.++.|++.+|..++|+|..+.|.. .++.....
T Consensus 166 YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mn 245 (538)
T KOG0661|consen 166 YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMN 245 (538)
T ss_pred cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999987 44555544
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
|.-...-...+...+...++++.+||.+||.+||.+||||.|+|+||||...
T Consensus 246 f~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 246 FRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG 297 (538)
T ss_pred cCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence 4332222334566677899999999999999999999999999999999854
No 5
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=5.4e-57 Score=455.21 Aligned_cols=285 Identities=34% Similarity=0.632 Sum_probs=248.5
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
+.|+.+.++|+|+||+||+|+++.||+.||||++.....++...+-.+|||.+|++|+|+|+|.|+++|.... .++|||
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkr-klhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKR-KLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcc-eeEEEe
Confidence 4699999999999999999999999999999999766656666666789999999999999999999997654 899999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
|||++..+..+...-..++...++.|++|++.|+.|||++++|||||||+||||+.+|.+||||||+|+.+.. ....++
T Consensus 81 E~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-pgd~YT 159 (396)
T KOG0593|consen 81 EYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA-PGDNYT 159 (396)
T ss_pred eecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcC-Ccchhh
Confidence 9999998888877666799999999999999999999999999999999999999999999999999998863 334578
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhH---HhhhccccccC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDY---WRKSKSAHATS 394 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~---~~~~~~~~~~~ 394 (665)
.++.|+||+|||++.|...|+..+||||+||++.||++|.|.|+|..+.+|+..|.+.+|...+.- |.+....+...
T Consensus 160 DYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~ 239 (396)
T KOG0593|consen 160 DYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVR 239 (396)
T ss_pred hhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeee
Confidence 899999999999999999999999999999999999999999999999999999999999887653 22221111111
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCC
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKT 445 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~ 445 (665)
+ |...-...+...+++++.-+.||++.||..||.+|++.+|+|.|+||..
T Consensus 240 l-P~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 240 L-PEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred c-CCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence 1 2222233455667789999999999999999999999999999999954
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.1e-56 Score=464.53 Aligned_cols=263 Identities=32% Similarity=0.476 Sum_probs=224.7
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCH-----HHHHHHHHHHHHHHhCCCCCcceeeeeeeccCC
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDP-----ESVRFMAREIHILRKLDHPNVMKLEGLVTSRSG 231 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~-----~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ 231 (665)
.+.|.+.+.||+|+||.|.+|..+.||+.||||++.+..... .....+.+|++||++|+|||||+++++|+..+
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d- 249 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD- 249 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC-
Confidence 457899999999999999999999999999999998654321 12334679999999999999999999998866
Q ss_pred cEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCC---CcEEEEecccceec
Q 006004 232 SLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNA---GVLKIGDFGLATTY 308 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~---g~lKL~DFGlA~~~ 308 (665)
..|||||||+|+.+....-..+.+.|...+.|++||+.||.|||++||+||||||+|||+..+ ..+||+|||+|+..
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~ 329 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVS 329 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcc
Confidence 789999999976555555555689999999999999999999999999999999999999876 68999999999987
Q ss_pred CCCCCCCcccccccccccCcccccCC--cccCcccchhhhHHHHHHHHhCCCCCCCCChHH-HHHHHHHhcCCCChhHHh
Q 006004 309 DPSQNLPLTSRVVTLWYRAPELLLGA--TKYGAAIDMWSAGCILAELFAGKPIMPGRTEVE-QMHKIFKLCGSPSEDYWR 385 (665)
Q Consensus 309 ~~~~~~~~~~~~gT~~Y~APE~l~~~--~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e-~l~kI~~~~g~p~~~~~~ 385 (665)
... ..+.+.||||.|.|||++.+. ..|..++||||||||||.+|+|.+||.+..... ...+|.+....+.+.+|+
T Consensus 330 g~~--sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~ 407 (475)
T KOG0615|consen 330 GEG--SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWD 407 (475)
T ss_pred ccc--eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhh
Confidence 633 347889999999999999753 344558999999999999999999999876555 666676654444445554
Q ss_pred hhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCC
Q 006004 386 KSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEP 447 (665)
Q Consensus 386 ~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~ 447 (665)
.++.++++||.+||.+||++|||+++||+||||+..+
T Consensus 408 -------------------------~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 408 -------------------------RISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP 444 (475)
T ss_pred -------------------------hhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence 5899999999999999999999999999999999764
No 7
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-55 Score=452.78 Aligned_cols=292 Identities=38% Similarity=0.632 Sum_probs=253.8
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeec----cCCcEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTS----RSGSLY 234 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~----~~~~l~ 234 (665)
.|..++.||.|+||.|+.|.++.+|+.||||++...-...-..++..||+.+|+.++|+||+.+.+++.. .-..+|
T Consensus 23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvY 102 (359)
T KOG0660|consen 23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVY 102 (359)
T ss_pred eecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeE
Confidence 5777899999999999999999999999999997433345567778899999999999999999999876 234689
Q ss_pred EEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC-CC
Q 006004 235 LVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS-QN 313 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~-~~ 313 (665)
+|+|+|+.+|...+.... .|++..+..+++||+.||.|+|+.+|+||||||.|||++.+..+||||||+|+..... ..
T Consensus 103 iV~elMetDL~~iik~~~-~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~ 181 (359)
T KOG0660|consen 103 LVFELMETDLHQIIKSQQ-DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFED 181 (359)
T ss_pred EehhHHhhHHHHHHHcCc-cccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCcc
Confidence 999999988888776543 6999999999999999999999999999999999999999999999999999988543 23
Q ss_pred CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccccc
Q 006004 314 LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHAT 393 (665)
Q Consensus 314 ~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~ 393 (665)
..++.++.|.||+|||+++....|+.++||||+||||.|||+|++.|+|.+..+|+..|...+|+|+++.+.......+.
T Consensus 182 ~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar 261 (359)
T KOG0660|consen 182 GFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKAR 261 (359)
T ss_pred cchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHH
Confidence 34688999999999999998899999999999999999999999999999999999999999999999988876644443
Q ss_pred CCCCCCcc--hhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCCCCC
Q 006004 394 SFKPQQPY--KRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPLPCD 451 (665)
Q Consensus 394 ~~~~~~p~--~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~~~~ 451 (665)
.+-...|. +......|++.++.|++|+++||..||.+|+|++|||+||||.....|.+
T Consensus 262 ~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~d 321 (359)
T KOG0660|consen 262 PYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPED 321 (359)
T ss_pred HHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCcc
Confidence 32222221 23356778899999999999999999999999999999999987655443
No 8
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-54 Score=470.84 Aligned_cols=257 Identities=32% Similarity=0.498 Sum_probs=231.5
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
.+|+..+.||+|+|+.||.+++..+|+.||+|+|.+..+ .....+.+.+||+|.++|+|||||+++++|++.+ ++|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~-nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSN-NVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCC-ceEEE
Confidence 479999999999999999999999999999999987654 5566778999999999999999999999999865 89999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
+|+|..+.+..+.++.+.|+|.+++.|++||+.||.|||+++|||||||..||||+++.+|||+|||||..+..... ..
T Consensus 97 LELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~E-rk 175 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGE-RK 175 (592)
T ss_pred EEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCccc-cc
Confidence 99999877766666778999999999999999999999999999999999999999999999999999999864422 34
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFK 396 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~ 396 (665)
.+.||||.|+|||++.. ..++..+||||+|||||.||.|+|||...+-.+++.+|...-.
T Consensus 176 ~TlCGTPNYIAPEVl~k-~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y------------------- 235 (592)
T KOG0575|consen 176 KTLCGTPNYIAPEVLNK-SGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEY------------------- 235 (592)
T ss_pred ceecCCCcccChhHhcc-CCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCc-------------------
Confidence 56799999999999986 6789999999999999999999999999999999999865311
Q ss_pred CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 397 PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 397 ~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
..+..++.+|++||.+||..||.+|||+.++|.|+||+..
T Consensus 236 ----------~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g 275 (592)
T KOG0575|consen 236 ----------SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG 275 (592)
T ss_pred ----------ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence 1223789999999999999999999999999999999544
No 9
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-53 Score=441.19 Aligned_cols=262 Identities=31% Similarity=0.474 Sum_probs=232.6
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEE
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~ 234 (665)
..++|++++.||+|+||+||+++.+.|++.||+|++++..+ ....++.+..|..||..++||+||+++..|++.. .+|
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~-kLy 101 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEE-KLY 101 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCC-eEE
Confidence 35689999999999999999999999999999999988765 3446788899999999999999999999999976 899
Q ss_pred EEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC
Q 006004 235 LVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL 314 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~ 314 (665)
||+||+.|+-+...+++.+.|+|..++.|+.+|+.||.|||++|||||||||+|||||.+|+++|+||||++..-... .
T Consensus 102 lVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~-~ 180 (357)
T KOG0598|consen 102 LVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG-D 180 (357)
T ss_pred EEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCC-C
Confidence 999999998777777777799999999999999999999999999999999999999999999999999998643322 2
Q ss_pred CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccC
Q 006004 315 PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATS 394 (665)
Q Consensus 315 ~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~ 394 (665)
...++|||+.|||||++.+ ..|+.++|+|||||++|+||+|.+||.+.+....+.+|.+.-.
T Consensus 181 ~t~tfcGT~eYmAPEil~~-~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~----------------- 242 (357)
T KOG0598|consen 181 ATRTFCGTPEYMAPEILLG-KGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKL----------------- 242 (357)
T ss_pred ccccccCCccccChHHHhc-CCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcC-----------------
Confidence 3456899999999999997 5899999999999999999999999999999999999876321
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCc----CHHHHHhCcCCCCCCC
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRG----SAASALRSEFFKTEPL 448 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~Rp----Ta~eaL~Hp~f~~~~~ 448 (665)
......++.++++||++||..||++|. .+.++-+||||....+
T Consensus 243 -----------~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW 289 (357)
T KOG0598|consen 243 -----------PLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINW 289 (357)
T ss_pred -----------CCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCH
Confidence 111234899999999999999999995 7999999999997643
No 10
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=4.9e-53 Score=438.21 Aligned_cols=290 Identities=41% Similarity=0.748 Sum_probs=248.5
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCC-cceeeeeeeccCC-----
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPN-VMKLEGLVTSRSG----- 231 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~Hpn-IV~l~~~~~~~~~----- 231 (665)
..|+.+++||+|+||+||+|+++.+|+.||+|+++.....+..-....+|+.+|+.|+|+| ||.|++++...+.
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 4688999999999999999999999999999999876542222234579999999999999 9999999987653
Q ss_pred cEEEEEEeccccchhhhcCCC---CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceec
Q 006004 232 SLYLVFEYMEHDLAGLATTPG---IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTY 308 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~~~~---~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~ 308 (665)
.+|+||||++-++...+.... ..++...++.+|+||+.||+|||++||+||||||.||||++.|.+||+|||+|+.+
T Consensus 91 ~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~ 170 (323)
T KOG0594|consen 91 KLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAF 170 (323)
T ss_pred eEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHh
Confidence 799999999999888777654 35788899999999999999999999999999999999999999999999999976
Q ss_pred CCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhc
Q 006004 309 DPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSK 388 (665)
Q Consensus 309 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~ 388 (665)
.-.. ..+++.++|.||+|||++++...|+..+||||+|||++||+++++.|+|..+.+++..|++.+|+|.++.|+...
T Consensus 171 ~ip~-~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~ 249 (323)
T KOG0594|consen 171 SIPM-RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVS 249 (323)
T ss_pred cCCc-ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCcc
Confidence 5322 236777999999999999999899999999999999999999999999999999999999999999999998654
Q ss_pred cccccCC-CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCC
Q 006004 389 SAHATSF-KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPL 448 (665)
Q Consensus 389 ~~~~~~~-~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~ 448 (665)
....... .+..+-...+....+...+++.+|+.+||.+||.+|.||..+|.||||...+.
T Consensus 250 ~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~ 310 (323)
T KOG0594|consen 250 SLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPE 310 (323)
T ss_pred ccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccccc
Confidence 2222111 11122234455666677789999999999999999999999999999997643
No 11
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-52 Score=432.59 Aligned_cols=258 Identities=33% Similarity=0.468 Sum_probs=227.0
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
.++.+.++.||+|..|+||+|+|+.|++.+|+|+|. .+.++...+++.+|++|++.++|||||++|++|......++|+
T Consensus 78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~-~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~ 156 (364)
T KOG0581|consen 78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVIL-LNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISIC 156 (364)
T ss_pred HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeec-ccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEee
Confidence 346889999999999999999999999999999995 3456778889999999999999999999999999864259999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHh-CCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHS-RGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~-~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||||+++.++.+....++++|..+..++.+++.||.|||+ ++||||||||+||||+..|.+||||||.+..+..+ .
T Consensus 157 mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS---~ 233 (364)
T KOG0581|consen 157 MEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS---I 233 (364)
T ss_pred hhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh---h
Confidence 9999998888888776789999999999999999999996 89999999999999999999999999999887654 4
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCC-----ChHHHHHHHHHhcCCCChhHHhhhccc
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGR-----TEVEQMHKIFKLCGSPSEDYWRKSKSA 390 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~-----~~~e~l~kI~~~~g~p~~~~~~~~~~~ 390 (665)
..+++||..|||||.+.+ ..|+.++||||||++++||++|+.||+.. +..+.+..|.. .|++
T Consensus 234 a~tfvGT~~YMsPERi~g-~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~---~ppP--------- 300 (364)
T KOG0581|consen 234 ANTFVGTSAYMSPERISG-ESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD---EPPP--------- 300 (364)
T ss_pred cccccccccccChhhhcC-CcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc---CCCC---------
Confidence 578899999999999997 68999999999999999999999999875 44555555533 2222
Q ss_pred cccCCCCCCcchhhhhhhcc-CCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCC
Q 006004 391 HATSFKPQQPYKRKVLETFR-NFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEP 447 (665)
Q Consensus 391 ~~~~~~~~~p~~~~~~~~~~-~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~ 447 (665)
..| . .+|+++++||..||.+||.+|+|+.|+|+|||++...
T Consensus 301 -------~lP---------~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~ 342 (364)
T KOG0581|consen 301 -------RLP---------EGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFE 342 (364)
T ss_pred -------CCC---------cccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcc
Confidence 122 2 4899999999999999999999999999999998643
No 12
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=8.2e-52 Score=444.94 Aligned_cols=278 Identities=33% Similarity=0.495 Sum_probs=234.4
Q ss_pred CCCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcE
Q 006004 155 RRADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSL 233 (665)
Q Consensus 155 ~~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l 233 (665)
...++|+++..||+|+||.||+|+.+.||.+||+|++++..+ ...++..+..|..||...++|+||+|+..|++.+ .+
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~-~L 216 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKE-YL 216 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCC-ee
Confidence 356789999999999999999999999999999999998765 5667889999999999999999999999999976 89
Q ss_pred EEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC--
Q 006004 234 YLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS-- 311 (665)
Q Consensus 234 ~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~-- 311 (665)
||||||++|+.+..++.....|+|..+++|+.+++.||+.||+.|+|||||||+|+|||..|++||.||||+.-+...
T Consensus 217 YLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~ 296 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHR 296 (550)
T ss_pred EEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhh
Confidence 999999998655555555568999999999999999999999999999999999999999999999999998543110
Q ss_pred --------------------CCC------------------------CcccccccccccCcccccCCcccCcccchhhhH
Q 006004 312 --------------------QNL------------------------PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAG 347 (665)
Q Consensus 312 --------------------~~~------------------------~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG 347 (665)
... ...+.+|||.|||||++++ ..|+..+|+||||
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~-kgY~~~cDwWSLG 375 (550)
T KOG0605|consen 297 IESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG-KGYGKECDWWSLG 375 (550)
T ss_pred hhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc-CCCCccccHHHHH
Confidence 000 0124689999999999998 5699999999999
Q ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccC
Q 006004 348 CILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIE 427 (665)
Q Consensus 348 ~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~D 427 (665)
||+||||.|.|||.+.+..++..+|.. |+..- .|+. ...++++|+|||.+||. |
T Consensus 376 ~ImyEmLvGyPPF~s~tp~~T~rkI~n---------wr~~l-----~fP~-----------~~~~s~eA~DLI~rll~-d 429 (550)
T KOG0605|consen 376 CIMYEMLVGYPPFCSETPQETYRKIVN---------WRETL-----KFPE-----------EVDLSDEAKDLITRLLC-D 429 (550)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHH---------Hhhhc-----cCCC-----------cCcccHHHHHHHHHHhc-C
Confidence 999999999999999999999999976 43210 0111 12467999999999999 9
Q ss_pred cCCCcC---HHHHHhCcCCCCCCCCCCCCCCCCCCC
Q 006004 428 PENRGS---AASALRSEFFKTEPLPCDPSNLPKYPP 460 (665)
Q Consensus 428 P~~RpT---a~eaL~Hp~f~~~~~~~~p~~~p~~~~ 460 (665)
|++|.. +.|+.+||||++..+..--..-|.|.|
T Consensus 430 ~~~RLG~~G~~EIK~HPfF~~v~W~~l~~~~apfvP 465 (550)
T KOG0605|consen 430 PENRLGSKGAEEIKKHPFFKGVDWDHLREMPAPFVP 465 (550)
T ss_pred HHHhcCcccHHHHhcCCccccCCcchhhcCCCCCCC
Confidence 999975 999999999998877543333344443
No 13
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-52 Score=445.38 Aligned_cols=262 Identities=34% Similarity=0.525 Sum_probs=232.4
Q ss_pred CCCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCc
Q 006004 155 RRADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGS 232 (665)
Q Consensus 155 ~~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~ 232 (665)
+...+|.+.+.||+|+|++|++|+++.+++.||||++.+.-+ .+..++.+.+|-.+|.+| .||.|++|+..|+++. .
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~-s 148 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE-S 148 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc-c
Confidence 456689999999999999999999999999999999976654 444567788999999999 8999999999999976 8
Q ss_pred EEEEEEeccc-cchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 233 LYLVFEYMEH-DLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 233 l~lV~Ey~~g-~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
+|+|+||+++ +|+.++..- +.|+|..++.|+.||+.||+|||++|||||||||||||||.+|++||+|||.|..+.+.
T Consensus 149 LYFvLe~A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred eEEEEEecCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 9999999985 566666554 58999999999999999999999999999999999999999999999999999987543
Q ss_pred CCC------------CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCC
Q 006004 312 QNL------------PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSP 379 (665)
Q Consensus 312 ~~~------------~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p 379 (665)
... ...++|||..|++||+|.. ...++.+|||+||||||.||.|.|||.+.++.-+.++|.++...+
T Consensus 228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~-~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~f 306 (604)
T KOG0592|consen 228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLND-SPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEF 306 (604)
T ss_pred hccccCccCcccccCcccceeeeecccCHHHhcC-CCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccC
Confidence 221 1256899999999999886 678999999999999999999999999999999999998864322
Q ss_pred ChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCC
Q 006004 380 SEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPL 448 (665)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~ 448 (665)
..+|++.++|||+++|..||.+|+|+.++.+||||.+..+
T Consensus 307 -----------------------------p~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw 346 (604)
T KOG0592|consen 307 -----------------------------PEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDW 346 (604)
T ss_pred -----------------------------CCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCCh
Confidence 2478999999999999999999999999999999987654
No 14
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-51 Score=425.58 Aligned_cols=281 Identities=40% Similarity=0.648 Sum_probs=238.3
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC-C---cEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS-G---SLY 234 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~-~---~l~ 234 (665)
.|+..+.+|.|+||.||+|...++++.||||++-.+.. .-.+|++||+.++|||||+|..+|.... . .+.
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 59999999999999999999999999999999864331 1247999999999999999999887652 2 356
Q ss_pred EEEEeccccchhhhcC---CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCC-CcEEEEecccceecCC
Q 006004 235 LVFEYMEHDLAGLATT---PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNA-GVLKIGDFGLATTYDP 310 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~---~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~-g~lKL~DFGlA~~~~~ 310 (665)
+|||||+.++...+.. .+.+++.-.++-|++||++||.|||..||+||||||.|||+|.+ |.+||||||.|+.+..
T Consensus 99 lVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~ 178 (364)
T KOG0658|consen 99 LVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVK 178 (364)
T ss_pred HHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeecc
Confidence 8999999988876663 35679999999999999999999999999999999999999966 9999999999999865
Q ss_pred CCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccc
Q 006004 311 SQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSA 390 (665)
Q Consensus 311 ~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~ 390 (665)
+. +..++..|+.|+|||++.|...|+.+.||||+|||+.||+.|+|.|+|.+..+|+..|++++|.|+.+.....+..
T Consensus 179 ~e--pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~ 256 (364)
T KOG0658|consen 179 GE--PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPN 256 (364)
T ss_pred CC--CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcc
Confidence 44 3578899999999999999999999999999999999999999999999999999999999999999876654433
Q ss_pred cccCCCCCCcchhhhh-hhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCC
Q 006004 391 HATSFKPQQPYKRKVL-ETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPL 448 (665)
Q Consensus 391 ~~~~~~~~~p~~~~~~-~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~ 448 (665)
.. .+.-..-....+. ......++++.+|+.++|.++|.+|.++.|+|.||||.+...
T Consensus 257 y~-~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~ 314 (364)
T KOG0658|consen 257 YT-EFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRD 314 (364)
T ss_pred cc-cccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhC
Confidence 22 1111111111111 245678999999999999999999999999999999986543
No 15
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-51 Score=411.36 Aligned_cols=257 Identities=27% Similarity=0.437 Sum_probs=232.2
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEE
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~ 234 (665)
..++|++++.||.|+||.|.+++++.+|..||+|++.+... .-.+++...+|..||+.+.||+++++++.|.+.+ .+|
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~-~ly 120 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNS-NLY 120 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCC-eEE
Confidence 35689999999999999999999999999999999987654 5567788899999999999999999999998865 899
Q ss_pred EEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC
Q 006004 235 LVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL 314 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~ 314 (665)
|||||++|+-+..+++..++|++..++.|+.||+.||+|||.++|++|||||||||||.+|.+||+|||+|......
T Consensus 121 mvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r--- 197 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR--- 197 (355)
T ss_pred EEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCc---
Confidence 99999999888888877779999999999999999999999999999999999999999999999999999987543
Q ss_pred CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccC
Q 006004 315 PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATS 394 (665)
Q Consensus 315 ~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~ 394 (665)
..+.||||.|+|||++.. ..|+.++|+|||||++|||+.|.+||...+...++++|....-.
T Consensus 198 -T~TlCGTPeYLAPEii~s-k~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~---------------- 259 (355)
T KOG0616|consen 198 -TWTLCGTPEYLAPEIIQS-KGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVK---------------- 259 (355)
T ss_pred -EEEecCCccccChHHhhc-CCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCccc----------------
Confidence 456799999999999986 78999999999999999999999999999999999999774221
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCC-----cCHHHHHhCcCCCCCC
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENR-----GSAASALRSEFFKTEP 447 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~R-----pTa~eaL~Hp~f~~~~ 447 (665)
.+..+++++++||++||+.|-.+| ....++..||||++..
T Consensus 260 -------------fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~ 304 (355)
T KOG0616|consen 260 -------------FPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVD 304 (355)
T ss_pred -------------CCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccccc
Confidence 224689999999999999999999 3578999999999753
No 16
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-52 Score=411.96 Aligned_cols=288 Identities=26% Similarity=0.423 Sum_probs=243.6
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEE
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~l 235 (665)
..+.|++.+.||+|.|+.||++.+..+|+.+|+|++....+.....+.+.+|+.|-+.|+|||||+|++.+... +..||
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~-~~~yl 87 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE-SFHYL 87 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhccc-ceeEE
Confidence 45689999999999999999999999999999999987766666778899999999999999999999988765 48899
Q ss_pred EEEecccc-chhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcC---CCcEEEEecccceecCCC
Q 006004 236 VFEYMEHD-LAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINN---AGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 236 V~Ey~~g~-ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~---~g~lKL~DFGlA~~~~~~ 311 (665)
|+|+|.|+ +...+.++ ..++|..+..+++||+++|.|||.+||||||+||+|+|+.. .--+||+|||+|..+.
T Consensus 88 vFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~-- 164 (355)
T KOG0033|consen 88 VFDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN-- 164 (355)
T ss_pred EEecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC--
Confidence 99999985 54555554 47899999999999999999999999999999999999964 3469999999999887
Q ss_pred CCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 312 QNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 312 ~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
.......++|||.|||||++.. .+|+..+|||+.|||||.||.|.+||.+.+....++.|.+.....+..+|
T Consensus 165 ~g~~~~G~~GtP~fmaPEvvrk-dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w------- 236 (355)
T KOG0033|consen 165 DGEAWHGFAGTPGYLSPEVLKK-DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEW------- 236 (355)
T ss_pred CccccccccCCCcccCHHHhhc-CCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCccc-------
Confidence 3334567899999999999986 78999999999999999999999999999999999999886655555454
Q ss_pred ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 006004 392 ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPLPCDPSNLPKYPPSKELDAKLRDQ 471 (665)
Q Consensus 392 ~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~~~~p~~~p~~~~~~e~~~~~~~~ 471 (665)
.++++++++||++||..||.+|+|+.|+|+|||+.+. ..........+.-..++..
T Consensus 237 ------------------~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r------~~~As~~H~~dtvd~lrkf 292 (355)
T KOG0033|consen 237 ------------------DTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNR------ERVASAIHRQDTVDCLKKF 292 (355)
T ss_pred ------------------CcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcch------HHHHHHhhhHHHHHHHHHh
Confidence 4799999999999999999999999999999999753 2222222333444556666
Q ss_pred HHHHHHHH
Q 006004 472 EARKQEAE 479 (665)
Q Consensus 472 e~~k~~~~ 479 (665)
.++++-..
T Consensus 293 NarRKLKg 300 (355)
T KOG0033|consen 293 NARRKLKG 300 (355)
T ss_pred hHHHHHHH
Confidence 66665443
No 17
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-50 Score=420.62 Aligned_cols=266 Identities=30% Similarity=0.456 Sum_probs=231.8
Q ss_pred CccCCCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCC
Q 006004 152 WQPRRADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSG 231 (665)
Q Consensus 152 ~~~~~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ 231 (665)
+.....++|.+.++||+|+||+||+|+++.++..||||.|.+..+..+.++.+..||+||+.|+|||||.|++++...+
T Consensus 4 ~~~~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~- 82 (429)
T KOG0595|consen 4 GSMRVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDD- 82 (429)
T ss_pred CcccccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCC-
Confidence 3344567899999999999999999999999999999999988888888999999999999999999999999998865
Q ss_pred cEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCC------CcEEEEecccc
Q 006004 232 SLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNA------GVLKIGDFGLA 305 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~------g~lKL~DFGlA 305 (665)
.+|||||||+|+.+..++...+.++|..++.+|.||+.||++||+++||||||||.||||+.. -.+||+|||+|
T Consensus 83 ~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 83 FIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred eEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 899999999976666666666689999999999999999999999999999999999999865 46999999999
Q ss_pred eecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHh
Q 006004 306 TTYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWR 385 (665)
Q Consensus 306 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~ 385 (665)
+.+.+. ....+.||+|.|||||++.. ..|+.++|+||+|+|||+|++|++||...+..|.+..+.+....
T Consensus 163 R~L~~~--~~a~tlcGSplYMAPEV~~~-~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~------- 232 (429)
T KOG0595|consen 163 RFLQPG--SMAETLCGSPLYMAPEVIMS-QQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEI------- 232 (429)
T ss_pred hhCCch--hHHHHhhCCccccCHHHHHh-ccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccc-------
Confidence 998744 34677899999999999974 78999999999999999999999999999998888865442111
Q ss_pred hhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCC
Q 006004 386 KSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEP 447 (665)
Q Consensus 386 ~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~ 447 (665)
+......+++...+|+..+|..+|..|.+..+-+.|++....+
T Consensus 233 -------------------~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 233 -------------------VPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred -------------------cCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 1111124667778999999999999999999999999998754
No 18
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.7e-48 Score=407.64 Aligned_cols=283 Identities=40% Similarity=0.725 Sum_probs=236.6
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
.++|++++.||.|+||.||+|++..+++.||+|+++..... .....+.+|+.++++++||||+++++++.... .+|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv 81 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKNLKHANIVTLHDIIHTER-CLTLV 81 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC-CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCC-eEEEE
Confidence 35799999999999999999999999999999999754321 22345678999999999999999999988754 78999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|||+.+++...+...+..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ...
T Consensus 82 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-~~~ 160 (288)
T cd07871 82 FEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-KTY 160 (288)
T ss_pred EeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC-ccc
Confidence 9999998887776666678999999999999999999999999999999999999999999999999998654322 223
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc--cC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA--TS 394 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~--~~ 394 (665)
....+|+.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+.+..+.+..+.|+....... ..
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (288)
T cd07871 161 SNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSY 240 (288)
T ss_pred cCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhcc
Confidence 4457899999999998766789999999999999999999999999999999999999999999999876432211 00
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
..+.. ...........+++++++||.+||.+||.+|+|+.|+|+||||
T Consensus 241 ~~~~~-~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 241 LFPQY-RAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred ccCcc-CCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 11110 0111223345688999999999999999999999999999998
No 19
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-48 Score=422.10 Aligned_cols=258 Identities=30% Similarity=0.483 Sum_probs=224.9
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCC---HHHHHHHHHHHHHHHhCC-CCCcceeeeeeeccCC
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMD---PESVRFMAREIHILRKLD-HPNVMKLEGLVTSRSG 231 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~---~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~ 231 (665)
..+.|.+.+.||+|+||+|++|++..++..||+|++...... ....+.+.+|+.++++++ ||||+++++++....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~- 93 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT- 93 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC-
Confidence 345899999999999999999999999999999987664221 123456779999999998 999999999999877
Q ss_pred cEEEEEEeccc-cchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCC-CcEEEEecccceecC
Q 006004 232 SLYLVFEYMEH-DLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNA-GVLKIGDFGLATTYD 309 (665)
Q Consensus 232 ~l~lV~Ey~~g-~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~-g~lKL~DFGlA~~~~ 309 (665)
.+|+||||+.| +|+..+.. .+++.|.+++.+|+||+.||+|||++||+||||||+|||++.+ +++||+|||++....
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence 59999999997 67777766 6689999999999999999999999999999999999999999 999999999999874
Q ss_pred CCCCCCcccccccccccCcccccCCc-ccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhc
Q 006004 310 PSQNLPLTSRVVTLWYRAPELLLGAT-KYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSK 388 (665)
Q Consensus 310 ~~~~~~~~~~~gT~~Y~APE~l~~~~-~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~ 388 (665)
.....+.+.+||+.|+|||++.+.. +-+.++||||+||+||.|++|+.||...+......+|.+..-
T Consensus 173 -~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~----------- 240 (370)
T KOG0583|consen 173 -GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEF----------- 240 (370)
T ss_pred -CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCc-----------
Confidence 3334578889999999999999865 446999999999999999999999999888888888655211
Q ss_pred cccccCCCCCCcchhhhhhhccCC-cHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCC
Q 006004 389 SAHATSFKPQQPYKRKVLETFRNF-PQSALALVDKLLTIEPENRGSAASALRSEFFKT 445 (665)
Q Consensus 389 ~~~~~~~~~~~p~~~~~~~~~~~~-s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~ 445 (665)
.....+ ++++++||.+||..||.+|+|+.+++.||||+.
T Consensus 241 ------------------~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 241 ------------------KIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred ------------------cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 112235 999999999999999999999999999999997
No 20
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=5.3e-48 Score=401.92 Aligned_cols=284 Identities=35% Similarity=0.605 Sum_probs=235.1
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++++.||+|+||.||+|++..+++.||+|++..........+.+.+|+.+++.++||||+++++++.... .+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRG-KLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCC-EEEEEE
Confidence 3699999999999999999999999999999999865444445567889999999999999999999987754 799999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
||+.++++..+......+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++..+.........
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (287)
T cd07848 80 EYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYT 159 (287)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccccccc
Confidence 99999888877665567999999999999999999999999999999999999999999999999999876543333344
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc---ccC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH---ATS 394 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~---~~~ 394 (665)
...||+.|+|||++.+ ..++.++|||||||++|+|++|++||++.+..+.+..+....+..+.+.+....... ...
T Consensus 160 ~~~~~~~y~aPE~~~~-~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07848 160 EYVATRWYRSPELLLG-APYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLR 238 (287)
T ss_pred ccccccccCCcHHHcC-CCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccc
Confidence 5678999999999986 568999999999999999999999999999888888888888887776654321110 000
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
+................++.++.+||++||++||.+|||++++|+||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 239 FPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred cCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 1100000111122234578999999999999999999999999999998
No 21
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-50 Score=405.07 Aligned_cols=247 Identities=31% Similarity=0.514 Sum_probs=216.1
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeee-eeeccCCcEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEG-LVTSRSGSLYLVF 237 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~-~~~~~~~~l~lV~ 237 (665)
+|+++++||.|+||+||++++..+|..+|+|.|.+..++....+.+..|+.+|++|+|||||++++ .|......++|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 699999999999999999999999999999999999999899999999999999999999999998 5555555699999
Q ss_pred Eeccccchhhhc----CCCCCCChhHHHHHHHHHHHHHHHHHh--CC--ccccCCCcccEEEcCCCcEEEEecccceecC
Q 006004 238 EYMEHDLAGLAT----TPGIKFTEPQIKCYMQQLLRGLEHCHS--RG--ILHRDIKGSNLLINNAGVLKIGDFGLATTYD 309 (665)
Q Consensus 238 Ey~~g~ll~~~~----~~~~~lse~~i~~i~~QIl~aL~~LH~--~g--IiHrDLKPeNILld~~g~lKL~DFGlA~~~~ 309 (665)
|||+++.+..++ +.+..++|..+++|+.||+.||.+||. .. |+||||||.||+|+.+|.+||+||||++++.
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 999964443332 355679999999999999999999999 45 9999999999999999999999999999986
Q ss_pred CCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcc
Q 006004 310 PSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKS 389 (665)
Q Consensus 310 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~ 389 (665)
.. .....+++|||.||+||.+.. .+|+.++|||||||++|||+.-++||.|++-.+...+|.+.-.+|-++
T Consensus 180 s~-~tfA~S~VGTPyYMSPE~i~~-~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~------- 250 (375)
T KOG0591|consen 180 SK-TTFAHSLVGTPYYMSPERIHE-SGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPD------- 250 (375)
T ss_pred ch-hHHHHhhcCCCcccCHHHHhc-CCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcH-------
Confidence 54 344678899999999999987 789999999999999999999999999998888888886642221110
Q ss_pred ccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCH
Q 006004 390 AHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSA 434 (665)
Q Consensus 390 ~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa 434 (665)
..+|.++..||..|+..||+.||+.
T Consensus 251 --------------------~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 251 --------------------EHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred --------------------HHhhhHHHHHHHHHccCCcccCCCc
Confidence 2578899999999999999999985
No 22
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-49 Score=373.02 Aligned_cols=286 Identities=41% Similarity=0.708 Sum_probs=251.6
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
.|..+++||+|+||+||++++.++++.||+|.++....++..-....+||-+|+.|+|.|||+++++..++. .+-+|+|
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdk-kltlvfe 81 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK-KLTLVFE 81 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCc-eeEEeHH
Confidence 578889999999999999999999999999999987655444455689999999999999999999987755 7999999
Q ss_pred eccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccc
Q 006004 239 YMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTS 318 (665)
Q Consensus 239 y~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~ 318 (665)
||..++...+..-++.+..+.++.+|.|++.||.|||+++|+||||||.|+||+.+|.+||+|||+|+.+.-... -...
T Consensus 82 ~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvr-cysa 160 (292)
T KOG0662|consen 82 FCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR-CYSA 160 (292)
T ss_pred HhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceE-eeec
Confidence 999999988888888899999999999999999999999999999999999999999999999999998754321 2344
Q ss_pred ccccccccCcccccCCcccCcccchhhhHHHHHHHH-hCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCC
Q 006004 319 RVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELF-AGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKP 397 (665)
Q Consensus 319 ~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLl-tG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~ 397 (665)
.+.|.||++|.++.+..-|+...|+||.|||+.|+. .|+|.|+|.+..+|+.+|+..+|.|.++-|+..........-|
T Consensus 161 evvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp 240 (292)
T KOG0662|consen 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYP 240 (292)
T ss_pred eeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccC
Confidence 578999999999999999999999999999999996 5899999999999999999999999999998754333333334
Q ss_pred CCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 398 QQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 398 ~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
..|-...+..+.+.+...-+||++++|.-+|..|++|+.+|+||||...
T Consensus 241 ~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 241 IYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred CccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 4444455667777888899999999999999999999999999999863
No 23
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3.1e-48 Score=427.12 Aligned_cols=281 Identities=33% Similarity=0.554 Sum_probs=234.2
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCC-C-----CCcceeeeeeeccCCc
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLD-H-----PNVMKLEGLVTSRSGS 232 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~-H-----pnIV~l~~~~~~~~~~ 232 (665)
+|++++.||+|+||.|.+|.+..|++.||||+++.. .....+...|+.||..|+ | -|||+++++|..++ +
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~-H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN-H 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc-c
Confidence 699999999999999999999999999999999743 455666778999999996 4 48999999999876 8
Q ss_pred EEEEEEeccccchhhhcCCC-CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCC--cEEEEecccceecC
Q 006004 233 LYLVFEYMEHDLAGLATTPG-IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAG--VLKIGDFGLATTYD 309 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~~~-~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g--~lKL~DFGlA~~~~ 309 (665)
+|||+|+++.+|..++.... ..|+...++.++.||+.||.+||..||||+|||||||||.+.+ .|||+|||+|+...
T Consensus 263 lciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~ 342 (586)
T KOG0667|consen 263 LCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFES 342 (586)
T ss_pred eeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccC
Confidence 99999999999999888754 4599999999999999999999999999999999999998644 69999999999864
Q ss_pred CCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcc
Q 006004 310 PSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKS 389 (665)
Q Consensus 310 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~ 389 (665)
.. ..+++-++.|+|||+|+| .+|+.+.||||||||++||++|.|+|+|.++.+|+..|..++|.|+..+++..+.
T Consensus 343 q~----vytYiQSRfYRAPEVILG-lpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~ 417 (586)
T KOG0667|consen 343 QR----VYTYIQSRFYRAPEVILG-LPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKK 417 (586)
T ss_pred Cc----ceeeeeccccccchhhcc-CCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccc
Confidence 32 347888999999999998 7899999999999999999999999999999999999999999999887665432
Q ss_pred ccc--cC--CCCC----------------------------Cc-chhhhhhhcc-CCcHHHHHHHHHhcccCcCCCcCHH
Q 006004 390 AHA--TS--FKPQ----------------------------QP-YKRKVLETFR-NFPQSALALVDKLLTIEPENRGSAA 435 (665)
Q Consensus 390 ~~~--~~--~~~~----------------------------~p-~~~~~~~~~~-~~s~~a~dLI~~lL~~DP~~RpTa~ 435 (665)
.+. +. ..+. .| ..+.+..... .-...+.|||.+||.+||.+|+|+.
T Consensus 418 ~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~ 497 (586)
T KOG0667|consen 418 AHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPA 497 (586)
T ss_pred cceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHH
Confidence 211 00 0000 00 0011111111 1234579999999999999999999
Q ss_pred HHHhCcCCCCCCC
Q 006004 436 SALRSEFFKTEPL 448 (665)
Q Consensus 436 eaL~Hp~f~~~~~ 448 (665)
++|+||||+....
T Consensus 498 qal~Hpfl~~~~~ 510 (586)
T KOG0667|consen 498 QALNHPFLTGTSL 510 (586)
T ss_pred HHhcCcccccccc
Confidence 9999999996543
No 24
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-48 Score=427.35 Aligned_cols=258 Identities=28% Similarity=0.440 Sum_probs=228.7
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecC-CCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFA-NMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~-~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
+-|++.+.||.|+-|.|.+|++.+||+.+|||+|.+. .........+.+||-||+.|.||||++||++|+... .+|+|
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~-~lylv 90 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQ-HLYLV 90 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCc-eEEEE
Confidence 4588999999999999999999999999999999876 444444566889999999999999999999998865 89999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
+||++|+-+..+....++|++.++.+|++||+.|+.|||..+|+||||||+|+|||..+++||+|||+|..-.++ ..+
T Consensus 91 lEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g--klL 168 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPG--KLL 168 (786)
T ss_pred EEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCC--ccc
Confidence 999997666555555668999999999999999999999999999999999999999999999999999875443 347
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFK 396 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~ 396 (665)
.+.||+|.|.|||++.|..+.+.++||||+|||||.||+|+.||.+.+-...+.++.+.
T Consensus 169 eTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G--------------------- 227 (786)
T KOG0588|consen 169 ETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRG--------------------- 227 (786)
T ss_pred cccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcC---------------------
Confidence 78899999999999999777899999999999999999999999988877777776542
Q ss_pred CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCC
Q 006004 397 PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEP 447 (665)
Q Consensus 397 ~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~ 447 (665)
.++.+.++|++|++||.+||.+||.+|+|.+|+++|||+....
T Consensus 228 --------~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~ 270 (786)
T KOG0588|consen 228 --------VFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYT 270 (786)
T ss_pred --------cccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCC
Confidence 3344568999999999999999999999999999999997643
No 25
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.7e-47 Score=402.73 Aligned_cols=285 Identities=38% Similarity=0.688 Sum_probs=232.2
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
.++|++++.||+|+||.||+|++..+++.||||+++..... .....+.+|+.+++.++||||+++++++.... .+|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE-GTPFTAIREASLLKGLKHANIVLLHDIIHTKE-TLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc-ccchhHHHHHHHHhhCCCCCcCeEEEEEecCC-eEEEE
Confidence 46899999999999999999999999999999998754322 22334678999999999999999999998765 79999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|||+.++++..+......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ...
T Consensus 82 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~ 160 (303)
T cd07869 82 FEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS-HTY 160 (303)
T ss_pred EECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC-ccC
Confidence 9999999888877666679999999999999999999999999999999999999999999999999997653222 223
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCChhHHhhhccccc---
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTE-VEQMHKIFKLCGSPSEDYWRKSKSAHA--- 392 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~-~e~l~kI~~~~g~p~~~~~~~~~~~~~--- 392 (665)
...++|+.|+|||++.+...++.++|||||||++|+|++|.+||.+..+ .+.+..+....+.+....|........
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (303)
T cd07869 161 SNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKP 240 (303)
T ss_pred CCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccccc
Confidence 4567899999999988766789999999999999999999999988644 567778888888888887765332110
Q ss_pred cCCCCCCcchhhhhhhc--cCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 393 TSFKPQQPYKRKVLETF--RNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 393 ~~~~~~~p~~~~~~~~~--~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
..+....+ ..+...+ ..+++.+.+||.+||++||.+|+|+.|+|+||||+..
T Consensus 241 ~~~~~~~~--~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~ 294 (303)
T cd07869 241 ERFTLYSP--KNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL 294 (303)
T ss_pred ccccccCC--ccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence 00000011 0111111 1356889999999999999999999999999999875
No 26
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-48 Score=427.04 Aligned_cols=262 Identities=27% Similarity=0.433 Sum_probs=231.4
Q ss_pred cCCCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCC
Q 006004 154 PRRADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSG 231 (665)
Q Consensus 154 ~~~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~ 231 (665)
+...++|.+++.||+|+||+|+++..+.+++.||||++++..+ ..+.++..+.|..|+... +||+++.|+.+|++.+
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~- 442 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE- 442 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC-
Confidence 4567899999999999999999999999999999999998765 567788899999999988 5999999999999876
Q ss_pred cEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 232 SLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
++|+||||+.|+.+..+. ....|++..++.|+..|+.||.|||++||||||||.+|||||.+|++||+|||+++.--.
T Consensus 443 ~l~fvmey~~Ggdm~~~~-~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~- 520 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMHHI-HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMG- 520 (694)
T ss_pred eEEEEEEecCCCcEEEEE-ecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCC-
Confidence 899999999987744444 334899999999999999999999999999999999999999999999999999986432
Q ss_pred CCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 312 QNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 312 ~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
......++||||.|||||++.+ ..|+.++|+|||||+|||||.|.+||+|.++.+....|...-
T Consensus 521 ~g~~TsTfCGTpey~aPEil~e-~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~--------------- 584 (694)
T KOG0694|consen 521 QGDRTSTFCGTPEFLAPEVLTE-QSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDE--------------- 584 (694)
T ss_pred CCCccccccCChhhcChhhhcc-CcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC---------------
Confidence 2224678899999999999987 789999999999999999999999999999999999986521
Q ss_pred ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC-----HHHHHhCcCCCCCCC
Q 006004 392 ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS-----AASALRSEFFKTEPL 448 (665)
Q Consensus 392 ~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT-----a~eaL~Hp~f~~~~~ 448 (665)
..++..+|.++.+++++||.+||++|.. +.++.+||||++..+
T Consensus 585 --------------~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w 632 (694)
T KOG0694|consen 585 --------------VRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDW 632 (694)
T ss_pred --------------CCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCH
Confidence 1123468999999999999999999975 589999999998644
No 27
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=4.8e-47 Score=403.92 Aligned_cols=287 Identities=36% Similarity=0.582 Sum_probs=233.6
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC----CcEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS----GSLY 234 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~----~~l~ 234 (665)
+|++.+.||+|+||.||+|++..+|+.||||++............+.+|+.+|+.++||||+++++++.... ..+|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 599999999999999999999999999999998754333334456789999999999999999999876432 2489
Q ss_pred EEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC--
Q 006004 235 LVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ-- 312 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~-- 312 (665)
+|||||.+++...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 lv~e~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 159 (338)
T cd07859 81 VVFELMESDLHQVIKAN-DDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 159 (338)
T ss_pred EEEecCCCCHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCc
Confidence 99999998877766543 469999999999999999999999999999999999999999999999999998653221
Q ss_pred CCCcccccccccccCcccccCC-cccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 313 NLPLTSRVVTLWYRAPELLLGA-TKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 313 ~~~~~~~~gT~~Y~APE~l~~~-~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
.......+||+.|+|||++.+. ..++.++|||||||++|+|++|++||.+.+...++..+....|.++.+.+.......
T Consensus 160 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 239 (338)
T cd07859 160 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEK 239 (338)
T ss_pred cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhh
Confidence 1223456799999999988642 568999999999999999999999999999999999999999988877665432211
Q ss_pred ccC----CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCC
Q 006004 392 ATS----FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPL 448 (665)
Q Consensus 392 ~~~----~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~ 448 (665)
... ..... .......++.+++.+.+||.+||..||++|||+.++|+||||+....
T Consensus 240 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 240 ARRYLSSMRKKQ--PVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred HHHHHHhhcccC--CCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence 100 00001 11123445578899999999999999999999999999999987544
No 28
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.7e-48 Score=418.49 Aligned_cols=256 Identities=32% Similarity=0.513 Sum_probs=229.9
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|.+.+.||+|+||.||+|+.+.|.+.||||.+.+.....+.++.+.+|++|++.|+|||||.+++.|+... ++|+|+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~-~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSA-HLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccc-eEEEEe
Confidence 4799999999999999999999999999999999888877788899999999999999999999999999865 899999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
||+.|+|...+.+.+ .++|++++.++++++.||.|||+++|+|||+||.|||++..|++|+||||+|+.+... ..-++
T Consensus 81 e~a~g~L~~il~~d~-~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~-t~vlt 158 (808)
T KOG0597|consen 81 EYAVGDLFTILEQDG-KLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN-TSVLT 158 (808)
T ss_pred hhhhhhHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccC-ceeee
Confidence 999998777766554 8999999999999999999999999999999999999999999999999999987653 33456
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKP 397 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~ 397 (665)
+..|||.|||||++.+ ..|+..+|+||||||||||++|+|||....-.+....|...--.+
T Consensus 159 sikGtPlYmAPElv~e-~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~------------------ 219 (808)
T KOG0597|consen 159 SIKGTPLYMAPELVEE-QPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKP------------------ 219 (808)
T ss_pred eccCcccccCHHHHcC-CCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCC------------------
Confidence 7789999999999986 789999999999999999999999999988777777775521111
Q ss_pred CCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 398 QQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 398 ~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
+...+.++++||+.+|.+||.+|.|-.++|.|||.+..
T Consensus 220 -----------p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 220 -----------PSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred -----------cccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence 12688999999999999999999999999999998753
No 29
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.5e-50 Score=394.39 Aligned_cols=292 Identities=45% Similarity=0.765 Sum_probs=244.7
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-------C
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-------S 230 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-------~ 230 (665)
..|+.+.+||+|.||.||+|+.+.+|+.||+|++-..+.....-....+|+.||..|+|+|++.|++++... .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 358899999999999999999999999999998765443222223356899999999999999998876432 2
Q ss_pred CcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCC
Q 006004 231 GSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDP 310 (665)
Q Consensus 231 ~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~ 310 (665)
..+|+||.+|+++|..++.....+|+..+++.+|.+++.||.|+|++.|+|||+|++|+||+.+|.+||+|||+|+.+..
T Consensus 97 ~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~ 176 (376)
T KOG0669|consen 97 ATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFST 176 (376)
T ss_pred ceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceec
Confidence 35999999999999999999888999999999999999999999999999999999999999999999999999987754
Q ss_pred CCC---CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhh
Q 006004 311 SQN---LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKS 387 (665)
Q Consensus 311 ~~~---~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~ 387 (665)
..+ ..++.++.|+||++||.++|...|+++.|||..|||+.||+++.+.|.+.++..+++.|..+||+...+.|+..
T Consensus 177 ~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~ 256 (376)
T KOG0669|consen 177 SKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNV 256 (376)
T ss_pred ccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCc
Confidence 433 34677889999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred c-cccccCC--CCC-Ccchhhhhhhcc--CCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCCC
Q 006004 388 K-SAHATSF--KPQ-QPYKRKVLETFR--NFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPLP 449 (665)
Q Consensus 388 ~-~~~~~~~--~~~-~p~~~~~~~~~~--~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~~ 449 (665)
. .+..... .|. ....+.+....+ .-.+++.+|++.||.+||.+|++++++|+|.||...+.|
T Consensus 257 d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p 324 (376)
T KOG0669|consen 257 DNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP 324 (376)
T ss_pred ccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence 2 2222111 110 111122222222 225689999999999999999999999999999987654
No 30
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.5e-48 Score=402.81 Aligned_cols=273 Identities=27% Similarity=0.364 Sum_probs=231.1
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~l 235 (665)
.++|++++.||.|.-|+||+|+...++..+|+|+|.+..+ ....+.+...|.+||+.++||.++.||..|+... .+|+
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~-~~cl 154 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDK-YSCL 154 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccc-eeEE
Confidence 4579999999999999999999999999999999987765 3556677889999999999999999999999865 8999
Q ss_pred EEEeccccchhhhc--CCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCC---
Q 006004 236 VFEYMEHDLAGLAT--TPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDP--- 310 (665)
Q Consensus 236 V~Ey~~g~ll~~~~--~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~--- 310 (665)
|||||.|+.+..+. +++..|++..+++|+.+++.||+|||.+|||+||||||||||.++|++.|.||.|+.....
T Consensus 155 ~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt 234 (459)
T KOG0610|consen 155 VMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPT 234 (459)
T ss_pred EEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCe
Confidence 99999986665444 3567799999999999999999999999999999999999999999999999998743210
Q ss_pred ------------------------------C-C---------------------CCCcccccccccccCcccccCCcccC
Q 006004 311 ------------------------------S-Q---------------------NLPLTSRVVTLWYRAPELLLGATKYG 338 (665)
Q Consensus 311 ------------------------------~-~---------------------~~~~~~~~gT~~Y~APE~l~~~~~~~ 338 (665)
. . .....+++||-.|+|||++.| ...+
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G-~GHg 313 (459)
T KOG0610|consen 235 LVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG-EGHG 313 (459)
T ss_pred eeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec-CCCC
Confidence 0 0 012245789999999999998 5679
Q ss_pred cccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHH
Q 006004 339 AAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALA 418 (665)
Q Consensus 339 ~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~d 418 (665)
.++|+|+|||+|||||.|..||.|.+..+++..|...--.+ | ..+.++..++|
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~F--------------------p-------~~~~vs~~akD 366 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKF--------------------P-------EEPEVSSAAKD 366 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcC--------------------C-------CCCcchhHHHH
Confidence 99999999999999999999999999999999886521111 1 11267899999
Q ss_pred HHHHhcccCcCCCcC----HHHHHhCcCCCCCCCCCCCCCCCCC
Q 006004 419 LVDKLLTIEPENRGS----AASALRSEFFKTEPLPCDPSNLPKY 458 (665)
Q Consensus 419 LI~~lL~~DP~~RpT----a~eaL~Hp~f~~~~~~~~p~~~p~~ 458 (665)
||++||.+||.+|.. |+|+.+||||++..|+.-....|++
T Consensus 367 LIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP~ 410 (459)
T KOG0610|consen 367 LIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRCARPPE 410 (459)
T ss_pred HHHHHhccChhhhhccccchHHhhcCccccCCChhheeccCCCc
Confidence 999999999999998 9999999999988776543334443
No 31
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-47 Score=406.23 Aligned_cols=264 Identities=32% Similarity=0.473 Sum_probs=224.1
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCH------------HHHHHHHHHHHHHHhCCCCCcceee
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDP------------ESVRFMAREIHILRKLDHPNVMKLE 223 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~------------~~~~~~~~Ei~iL~~L~HpnIV~l~ 223 (665)
..++|++++.||+|.||.|.+|++..+++.||||++.+..... -.++.+.+||.||++|.|||||+|+
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 4568999999999999999999999999999999996432111 1135788999999999999999999
Q ss_pred eeeecc-CCcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEec
Q 006004 224 GLVTSR-SGSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDF 302 (665)
Q Consensus 224 ~~~~~~-~~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DF 302 (665)
++..+. +..+|||+|||..+-....-.....|++.+++.|++.++.||+|||.+|||||||||+|+||+.+|++||+||
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDF 254 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDF 254 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeecc
Confidence 998876 6689999999998776666555434999999999999999999999999999999999999999999999999
Q ss_pred ccceecCCCC----CCCcccccccccccCcccccC---CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHh
Q 006004 303 GLATTYDPSQ----NLPLTSRVVTLWYRAPELLLG---ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKL 375 (665)
Q Consensus 303 GlA~~~~~~~----~~~~~~~~gT~~Y~APE~l~~---~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~ 375 (665)
|.+..+..+. ...+...+|||.|+|||++.+ ....+.+.|||||||+||.|+.|+.||-+....+...+|...
T Consensus 255 GVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~ 334 (576)
T KOG0585|consen 255 GVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVND 334 (576)
T ss_pred ceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcC
Confidence 9998773321 122344689999999999986 234578999999999999999999999999999999999763
Q ss_pred cCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 376 CGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 376 ~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
-- .+...+.+...++|||.+||.+||++|+++.++..|||....
T Consensus 335 pL---------------------------~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 335 PL---------------------------EFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred cc---------------------------cCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 11 111223578899999999999999999999999999998754
No 32
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.8e-46 Score=391.02 Aligned_cols=280 Identities=40% Similarity=0.685 Sum_probs=227.8
Q ss_pred CeeEEEEeeccCceEEEEEEECC-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC---CCCCcceeeeeeec----cC
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLE-TGKIVALKKVRFANMDPESVRFMAREIHILRKL---DHPNVMKLEGLVTS----RS 230 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~-~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L---~HpnIV~l~~~~~~----~~ 230 (665)
+|++++.||+|+||.||+|++.. +++.||+|+++...........+.+|+.+++.+ +||||+++++++.. ..
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 69999999999999999999865 468899999876543333334456788887776 69999999998752 23
Q ss_pred CcEEEEEEeccccchhhhcCC-CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecC
Q 006004 231 GSLYLVFEYMEHDLAGLATTP-GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYD 309 (665)
Q Consensus 231 ~~l~lV~Ey~~g~ll~~~~~~-~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~ 309 (665)
..+++||||+.+++...+... ...+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 82 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T cd07862 82 TKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS 161 (290)
T ss_pred CcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEecc
Confidence 468999999998887766543 3458999999999999999999999999999999999999999999999999998764
Q ss_pred CCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcc
Q 006004 310 PSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKS 389 (665)
Q Consensus 310 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~ 389 (665)
.. .......||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+.+|....+.+....|.....
T Consensus 162 ~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 238 (290)
T cd07862 162 FQ--MALTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 238 (290)
T ss_pred CC--cccccccccccccChHHHhC-CCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhc
Confidence 33 22345578999999999876 5789999999999999999999999999999999999999998888777765322
Q ss_pred ccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 390 AHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 390 ~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.....+....+ ..+....+.+++.+.+||.+||+.||++|||+.++|+||||
T Consensus 239 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 239 LPRQAFHSKSA--QPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred ccchhccCCCC--CCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 11111211111 11223345788999999999999999999999999999998
No 33
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.4e-46 Score=408.16 Aligned_cols=287 Identities=34% Similarity=0.547 Sum_probs=237.2
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC----CcEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS----GSLY 234 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~----~~l~ 234 (665)
+|++++.||+|+||.||++++..+|+.||||++..........+.+.+|+.+|+.++||||+++++++.... ..+|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 488999999999999999999999999999998654334445567889999999999999999999987653 2689
Q ss_pred EEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC
Q 006004 235 LVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL 314 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~ 314 (665)
+||||+.+++...+... ..+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 81 lv~e~~~~~l~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~ 159 (372)
T cd07853 81 VVTELMQSDLHKIIVSP-QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK 159 (372)
T ss_pred EEeeccccCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccc
Confidence 99999998877766544 47999999999999999999999999999999999999999999999999999876544444
Q ss_pred CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc---
Q 006004 315 PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH--- 391 (665)
Q Consensus 315 ~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~--- 391 (665)
.....++|+.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+++..|...+|.+..+.+.......
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 239 (372)
T cd07853 160 HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAH 239 (372)
T ss_pred cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHH
Confidence 44556789999999999876678999999999999999999999999999999999999999998876554321100
Q ss_pred ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 392 ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 392 ~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
........+............++++.+||.+||.+||.+|||+.++|+||||...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 240 ILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG 294 (372)
T ss_pred HHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence 0000111111112223334678999999999999999999999999999999874
No 34
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.4e-46 Score=395.04 Aligned_cols=286 Identities=36% Similarity=0.708 Sum_probs=238.9
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
.++|++++.||+|+||.||+|++..+++.||+|.++..... .....+.+|+.++++++||||+++++++.... .+|+|
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv 82 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIVHTDK-SLTLV 82 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC-CcchhHHHHHHHHHhCCCCCcceEEEEEeeCC-eEEEE
Confidence 35799999999999999999999999999999999754322 22334678999999999999999999988754 79999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|||+.+++...+...+..+++.+++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++........ ..
T Consensus 83 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~ 161 (309)
T cd07872 83 FEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK-TY 161 (309)
T ss_pred EeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc-cc
Confidence 99999988887776666789999999999999999999999999999999999999999999999999986543222 22
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccccc---
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHAT--- 393 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~--- 393 (665)
....+|+.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+.+..+.+..+.|+........
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
T cd07872 162 SNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNY 241 (309)
T ss_pred ccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhh
Confidence 34467999999999887667899999999999999999999999999999999999999999999888764322110
Q ss_pred CCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCC
Q 006004 394 SFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEP 447 (665)
Q Consensus 394 ~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~ 447 (665)
.+.... ..........+++++++||.+||..||.+|+|+.|+|+||||+...
T Consensus 242 ~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 242 NFPKYK--PQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred hcCccC--CCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 011100 1112234456899999999999999999999999999999998753
No 35
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.7e-46 Score=417.35 Aligned_cols=282 Identities=32% Similarity=0.504 Sum_probs=228.1
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-------C
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-------S 230 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-------~ 230 (665)
.+|++.+.||+|+||.||+|++..+++.||||++.... ....+|+.+|+.++|||||+++++|... .
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 47999999999999999999999999999999886432 1235799999999999999999877432 1
Q ss_pred CcEEEEEEeccccchhhhc---CCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCC-cEEEEecccce
Q 006004 231 GSLYLVFEYMEHDLAGLAT---TPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAG-VLKIGDFGLAT 306 (665)
Q Consensus 231 ~~l~lV~Ey~~g~ll~~~~---~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g-~lKL~DFGlA~ 306 (665)
..+++||||+.+++...+. .....+++..++.|+.||+.||.|||++||+||||||+||||+.++ .+||+|||+|.
T Consensus 140 ~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 140 IFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred eEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccch
Confidence 2477999999987765443 3456799999999999999999999999999999999999999665 79999999998
Q ss_pred ecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhh
Q 006004 307 TYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRK 386 (665)
Q Consensus 307 ~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~ 386 (665)
.+.... .....+||+.|+|||++.+...|+.++|||||||+||+|++|.+||.+.+..+++.++...+|.|..+.+..
T Consensus 220 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~ 297 (440)
T PTZ00036 220 NLLAGQ--RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKE 297 (440)
T ss_pred hccCCC--CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 764332 234567899999999998766799999999999999999999999999999999999999999998877654
Q ss_pred hccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCC
Q 006004 387 SKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEP 447 (665)
Q Consensus 387 ~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~ 447 (665)
..........+...............++++++||.+||.+||.+|+|+.|+|+||||....
T Consensus 298 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~ 358 (440)
T PTZ00036 298 MNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR 358 (440)
T ss_pred hchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence 3221111111111101111112235788999999999999999999999999999998654
No 36
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=4.7e-48 Score=391.18 Aligned_cols=291 Identities=38% Similarity=0.647 Sum_probs=238.5
Q ss_pred CeeEEEEeeccCceEEEEEEECCCC----cEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETG----KIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g----~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~ 234 (665)
.|+.+.+||+|+||.||+|..+.+. +.||||+++........-....|||.+++.|+||||+.|..+|...+..+|
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~ 104 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVW 104 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEE
Confidence 5999999999999999999755543 379999987653221222345689999999999999999999988667899
Q ss_pred EEEEeccccchhhhcC----CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCC----CcEEEEecccce
Q 006004 235 LVFEYMEHDLAGLATT----PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNA----GVLKIGDFGLAT 306 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~----~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~----g~lKL~DFGlA~ 306 (665)
+++||.++||+..+.- ....++...++.++.||+.|+.|||++-|+||||||.||||..+ |.|||+|||+|+
T Consensus 105 l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR 184 (438)
T KOG0666|consen 105 LLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLAR 184 (438)
T ss_pred EEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHH
Confidence 9999999999987663 23568999999999999999999999999999999999999987 899999999999
Q ss_pred ecCCCCC--CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCC---------hHHHHHHHHHh
Q 006004 307 TYDPSQN--LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRT---------EVEQMHKIFKL 375 (665)
Q Consensus 307 ~~~~~~~--~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~---------~~e~l~kI~~~ 375 (665)
.+...-. ......+.|.||+|||+++|...|+.++|||++|||+.|||+..|.|.|.. ..+++.+|+++
T Consensus 185 ~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~v 264 (438)
T KOG0666|consen 185 LFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEV 264 (438)
T ss_pred HhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHH
Confidence 8854322 123456789999999999999999999999999999999999999998753 36899999999
Q ss_pred cCCCChhHHhhhccc-cc----cCCCCCCcch---hhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCC
Q 006004 376 CGSPSEDYWRKSKSA-HA----TSFKPQQPYK---RKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEP 447 (665)
Q Consensus 376 ~g~p~~~~~~~~~~~-~~----~~~~~~~p~~---~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~ 447 (665)
+|.|.++.|...+.- +. ..|....... -......+.-++.+.+|+.+||.+||-+|.|+++||+|+||+..+
T Consensus 265 LG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~ 344 (438)
T KOG0666|consen 265 LGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDP 344 (438)
T ss_pred cCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCC
Confidence 999999999876432 11 1111111111 112333444567799999999999999999999999999999887
Q ss_pred CC
Q 006004 448 LP 449 (665)
Q Consensus 448 ~~ 449 (665)
.|
T Consensus 345 lp 346 (438)
T KOG0666|consen 345 LP 346 (438)
T ss_pred CC
Confidence 66
No 37
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=5.5e-46 Score=391.96 Aligned_cols=301 Identities=48% Similarity=0.860 Sum_probs=249.8
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC-CcEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS-GSLYL 235 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~-~~l~l 235 (665)
.++|++++.||+|+||.||+|.+..+|+.||+|+++...........+.+|+.++++++|+||+++++++.... ..+|+
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 45799999999999999999999999999999999765433333334568999999999999999999987642 46899
Q ss_pred EEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 236 VFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 236 V~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||||+.+++...+......+++.++..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++..+.... ..
T Consensus 86 v~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~-~~ 164 (309)
T cd07845 86 VMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA-KP 164 (309)
T ss_pred EEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc-CC
Confidence 99999988777766655679999999999999999999999999999999999999999999999999998765332 12
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc-cC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA-TS 394 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~-~~ 394 (665)
.....+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+...++.+....|........ ..
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (309)
T cd07845 165 MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGK 244 (309)
T ss_pred CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccccccc
Confidence 23345688999999988766789999999999999999999999999999999999999999998888865432211 11
Q ss_pred CC-CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCCCCCCCCCCCCC
Q 006004 395 FK-PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPLPCDPSNLPKYP 459 (665)
Q Consensus 395 ~~-~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~~~~p~~~p~~~ 459 (665)
+. ...++. .+...+..+++.+.+||.+||.+||.+|||+.++|.||||...+++|.+..+|.+|
T Consensus 245 ~~~~~~~~~-~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~~~~~~~~~~~ 309 (309)
T cd07845 245 FTLPKQPYN-NLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPCEPEMMPTFP 309 (309)
T ss_pred ccccCCCCC-chHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCCCCCCcCCCCC
Confidence 11 111111 22233445789999999999999999999999999999999999999988888765
No 38
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.2e-46 Score=402.19 Aligned_cols=291 Identities=29% Similarity=0.510 Sum_probs=235.2
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC-----C
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS-----G 231 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~-----~ 231 (665)
.++|++++.||+|+||.||+|.+..+++.||||++............+.+|+.+++.++||||+++++++.... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 35799999999999999999999999999999999765444455567789999999999999999999876432 3
Q ss_pred cEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 232 SLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
.+|+||||+.+++...+.. .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 103 ~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 179 (364)
T cd07875 103 DVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179 (364)
T ss_pred eEEEEEeCCCCCHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCC
Confidence 5799999999988776642 5889999999999999999999999999999999999999999999999999875432
Q ss_pred CCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 312 QNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 312 ~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
. ......+|+.|+|||++.+ ..++.++|||||||+||+|++|+.||.+.+..+.+.++....+.+..+++.......
T Consensus 180 ~--~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (364)
T cd07875 180 F--MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 256 (364)
T ss_pred C--cccCCcccCCcCCHHHHhC-CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHH
Confidence 2 2345678999999999986 678999999999999999999999999999999999999999999888766543211
Q ss_pred ccCCCCCCcc-----h--------hhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCCCCCCC
Q 006004 392 ATSFKPQQPY-----K--------RKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPLPCDPS 453 (665)
Q Consensus 392 ~~~~~~~~p~-----~--------~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~~~~p~ 453 (665)
.........+ . ..........+..+++||.+||..||.+|||+.++|+||||.....+....
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~~~~~~ 331 (364)
T cd07875 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAE 331 (364)
T ss_pred HHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccccCcccCC
Confidence 1100000000 0 000111223467899999999999999999999999999998654444333
No 39
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.7e-46 Score=400.11 Aligned_cols=287 Identities=31% Similarity=0.531 Sum_probs=232.7
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC-----C
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS-----G 231 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~-----~ 231 (665)
.++|++++.||+|+||.||++++..+|+.||||++............+.+|+.+++.++||||+++++++.... .
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 35799999999999999999999999999999999765444455667789999999999999999999886542 2
Q ss_pred cEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 232 SLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
.+|+||||+.+++...+.. .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 100 ~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~ 176 (359)
T cd07876 100 DVYLVMELMDANLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN 176 (359)
T ss_pred eeEEEEeCCCcCHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccC
Confidence 5799999999987776542 5899999999999999999999999999999999999999999999999999765332
Q ss_pred CCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 312 QNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 312 ~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
.......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+....+.+..++++......
T Consensus 177 --~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (359)
T cd07876 177 --FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTV 253 (359)
T ss_pred --ccCCCCcccCCCCCchhccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 22345678999999999986 678999999999999999999999999999999999999999999887765432111
Q ss_pred ccC--CCCCC---cchh--------hhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCCC
Q 006004 392 ATS--FKPQQ---PYKR--------KVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPLP 449 (665)
Q Consensus 392 ~~~--~~~~~---p~~~--------~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~~ 449 (665)
... ..+.. .+.. .........++.+++||.+||.+||.+|||+.|+|+||||..+..+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~ 324 (359)
T cd07876 254 RNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDP 324 (359)
T ss_pred HHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhcCc
Confidence 000 00000 0000 0011122356789999999999999999999999999999865433
No 40
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.4e-46 Score=408.95 Aligned_cols=281 Identities=25% Similarity=0.367 Sum_probs=222.5
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
.+|++++.||+|+||.||+|++..+++.||||... ...+.+|+++|++|+|||||+++++|.... ..|+||
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~--------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~-~~~lv~ 162 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ--------RGGTATEAHILRAINHPSIIQLKGTFTYNK-FTCLIL 162 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh--------hhhhHHHHHHHHhCCCCCCCCEeEEEEECC-eeEEEE
Confidence 47999999999999999999999999999999753 223578999999999999999999998754 789999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
|++.+++...+... ..+++.+++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+|............
T Consensus 163 e~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~ 241 (391)
T PHA03212 163 PRYKTDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYY 241 (391)
T ss_pred ecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccc
Confidence 99998877766554 46899999999999999999999999999999999999999999999999999764333323344
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCC-------ChHHHHHHHHHhcCCCChhHHhhhccc
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGR-------TEVEQMHKIFKLCGSPSEDYWRKSKSA 390 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~-------~~~e~l~kI~~~~g~p~~~~~~~~~~~ 390 (665)
..+||+.|+|||++.+ ..|+.++|||||||+||+|++|+.||.+. +...++..+....|.++.++.......
T Consensus 242 ~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~ 320 (391)
T PHA03212 242 GWAGTIATNAPELLAR-DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQAN 320 (391)
T ss_pred cccCccCCCChhhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHH
Confidence 5689999999999876 57899999999999999999999777543 234677788888887765542111000
Q ss_pred ccc------CCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCCC
Q 006004 391 HAT------SFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPLP 449 (665)
Q Consensus 391 ~~~------~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~~ 449 (665)
... ......+..+........++.++.+||.+||++||.+||||.|+|+||||...+.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~ 385 (391)
T PHA03212 321 LDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDP 385 (391)
T ss_pred HHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCC
Confidence 000 00001111111112223467889999999999999999999999999999876543
No 41
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4e-46 Score=404.47 Aligned_cols=259 Identities=34% Similarity=0.514 Sum_probs=227.5
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCC-CCCcceeeeeeeccCCcEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLD-HPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~~l~l 235 (665)
+.|++.+.||.|.||.||+|+++.+|+.||+|++.+... .......+.+|+.||++|. |||||.++++|++.. .+|+
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~-~~~l 113 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD-SVYL 113 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC-eEEE
Confidence 479999999999999999999999999999999987654 2334567899999999998 999999999999876 8999
Q ss_pred EEEeccccchh-hhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCC----CcEEEEecccceecCC
Q 006004 236 VFEYMEHDLAG-LATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNA----GVLKIGDFGLATTYDP 310 (665)
Q Consensus 236 V~Ey~~g~ll~-~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~----g~lKL~DFGlA~~~~~ 310 (665)
|||+|.|+.+. .+... .++|.++..++.||+.++.|||..||+||||||+|||+... +.+|++|||++.....
T Consensus 114 vmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~ 191 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP 191 (382)
T ss_pred EEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence 99999975544 44443 49999999999999999999999999999999999999743 4799999999999866
Q ss_pred CCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccc
Q 006004 311 SQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSA 390 (665)
Q Consensus 311 ~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~ 390 (665)
.......+||+.|+|||++.. ..|+..+||||+||++|.||+|.+||.+.++.+...+|......+..++|
T Consensus 192 --~~~~~~~~Gtp~y~APEvl~~-~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w------ 262 (382)
T KOG0032|consen 192 --GERLHTIVGTPEYVAPEVLGG-RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPW------ 262 (382)
T ss_pred --CceEeeecCCccccCchhhcC-CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCc------
Confidence 345677899999999999975 68999999999999999999999999999999888888765444444443
Q ss_pred cccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCC
Q 006004 391 HATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEP 447 (665)
Q Consensus 391 ~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~ 447 (665)
..++..+++||.+||..||.+|+|+.++|+|||++...
T Consensus 263 -------------------~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~ 300 (382)
T KOG0032|consen 263 -------------------DDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIG 300 (382)
T ss_pred -------------------cccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCc
Confidence 47899999999999999999999999999999998753
No 42
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1e-45 Score=384.61 Aligned_cols=280 Identities=40% Similarity=0.697 Sum_probs=227.5
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC---CCCCcceeeeeeecc----CC
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKL---DHPNVMKLEGLVTSR----SG 231 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L---~HpnIV~l~~~~~~~----~~ 231 (665)
+|++++.||+|+||.||+|+++.+++.||+|.++...........+.+|+.+++.+ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 48999999999999999999999999999999875432222223345677777665 799999999987642 23
Q ss_pred cEEEEEEeccccchhhhcCC-CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCC
Q 006004 232 SLYLVFEYMEHDLAGLATTP-GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDP 310 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~~~-~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~ 310 (665)
.+++||||+.+++...+... ...+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+..
T Consensus 81 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSC 160 (288)
T ss_pred eEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccC
Confidence 58999999998877766543 23589999999999999999999999999999999999999999999999999987643
Q ss_pred CCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccc
Q 006004 311 SQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSA 390 (665)
Q Consensus 311 ~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~ 390 (665)
.. ......+|+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+.++....+.+....|......
T Consensus 161 ~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07863 161 QM--ALTPVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTL 237 (288)
T ss_pred cc--cCCCccccccccCchHhhC-CCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccc
Confidence 22 2344578999999999976 56899999999999999999999999999999999999998888877776543221
Q ss_pred cccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 391 HATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 391 ~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
....+.+.. ........+.++..+.+||.+||++||.+|||+.++|.||||
T Consensus 238 ~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 238 PRGAFSPRG--PRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred cccccCCCC--CCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 111222111 122334445788999999999999999999999999999998
No 43
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7e-47 Score=397.25 Aligned_cols=259 Identities=31% Similarity=0.496 Sum_probs=213.3
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCC-cEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSG-SLYLVF 237 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~-~l~lV~ 237 (665)
++...+.||+|+||.||++.+..+|..+|||.+..... ...+.+.+|+.+|.+|+|||||++++....... .++|+|
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~--~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS--PTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccc--hhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 58888999999999999999999999999999986632 226778999999999999999999997555544 689999
Q ss_pred EeccccchhhhcCC-CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcC-CCcEEEEecccceecCC--CCC
Q 006004 238 EYMEHDLAGLATTP-GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINN-AGVLKIGDFGLATTYDP--SQN 313 (665)
Q Consensus 238 Ey~~g~ll~~~~~~-~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~-~g~lKL~DFGlA~~~~~--~~~ 313 (665)
||+.++.+..+... +..|+|..++.|.+||++||.|||++|||||||||+||||+. ++.+||+|||++..... ...
T Consensus 96 Ey~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~ 175 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKS 175 (313)
T ss_pred eccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccccc
Confidence 99998766655544 338999999999999999999999999999999999999999 79999999999988763 222
Q ss_pred CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCC-ChHHHHHHHHHhcCCCChhHHhhhccccc
Q 006004 314 LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGR-TEVEQMHKIFKLCGSPSEDYWRKSKSAHA 392 (665)
Q Consensus 314 ~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~-~~~e~l~kI~~~~g~p~~~~~~~~~~~~~ 392 (665)
.....+.||+.|||||++......+.++|||||||++.||+||.+||... ...+.+-.|... .
T Consensus 176 ~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~---~------------- 239 (313)
T KOG0198|consen 176 DSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRE---D------------- 239 (313)
T ss_pred cccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhcc---C-------------
Confidence 23456789999999999985233345999999999999999999999874 333333332211 0
Q ss_pred cCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 393 TSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 393 ~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
. ....+..+|+++++||.+||.+||.+||||.++|+|||....
T Consensus 240 --~---------~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 240 --S---------LPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred --C---------CCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 0 012335699999999999999999999999999999999764
No 44
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-46 Score=408.45 Aligned_cols=255 Identities=30% Similarity=0.531 Sum_probs=226.1
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
.|....+||+|.-|.||.|+...+++.||||.+.+.....+ +.+.+|+.+|+.++|+|||.+++.|...+ .+|+|||
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~k--eLilnEi~Vm~~~~H~NiVnfl~Sylv~d-eLWVVME 350 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKK--ELLLNEILVMRDLHHPNIVNFLDSYLVGD-ELWVVME 350 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCch--hhhHHHHHHHHhccchHHHHHHHHhcccc-eeEEEEe
Confidence 58899999999999999999999999999999987765433 44789999999999999999999888764 7999999
Q ss_pred eccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccc
Q 006004 239 YMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTS 318 (665)
Q Consensus 239 y~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~ 318 (665)
||+|+.+..+.... .++|.++..++++++.||+|||.+||+|||||.+|||++.+|.+||+|||++..+..... ...+
T Consensus 351 ym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-KR~T 428 (550)
T KOG0578|consen 351 YMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-KRST 428 (550)
T ss_pred ecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccC-cccc
Confidence 99998877776654 599999999999999999999999999999999999999999999999999999876554 3456
Q ss_pred ccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCC
Q 006004 319 RVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQ 398 (665)
Q Consensus 319 ~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~ 398 (665)
.+|||.|||||++.. ..|++++||||||++++||+-|.|||-.++....+..|.. .|.|.-.
T Consensus 429 mVGTPYWMAPEVvtr-k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~-ng~P~lk---------------- 490 (550)
T KOG0578|consen 429 MVGTPYWMAPEVVTR-KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPKLK---------------- 490 (550)
T ss_pred ccCCCCccchhhhhh-cccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhh-cCCCCcC----------------
Confidence 699999999999986 6899999999999999999999999999988888877755 3443221
Q ss_pred CcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCC
Q 006004 399 QPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKT 445 (665)
Q Consensus 399 ~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~ 445 (665)
....+|+.+++||.+||+.||.+|++|.++|+||||+.
T Consensus 491 ---------~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~ 528 (550)
T KOG0578|consen 491 ---------NPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM 528 (550)
T ss_pred ---------CccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence 12469999999999999999999999999999999964
No 45
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.9e-45 Score=396.13 Aligned_cols=287 Identities=30% Similarity=0.509 Sum_probs=233.0
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC-----C
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS-----G 231 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~-----~ 231 (665)
.++|++++.||+|+||.||+|.+..+++.||||++............+.+|+.+++.++||||+++++++.... .
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 95 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQ 95 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccc
Confidence 45899999999999999999999999999999999765444555667789999999999999999999886432 3
Q ss_pred cEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 232 SLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
.+|+||||+++++...+.. .+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++......
T Consensus 96 ~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~ 172 (355)
T cd07874 96 DVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 172 (355)
T ss_pred eeEEEhhhhcccHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCc
Confidence 5799999999987766542 5899999999999999999999999999999999999999999999999999875432
Q ss_pred CCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 312 QNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 312 ~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
.......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+...++.+..+++.+.....
T Consensus 173 --~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (355)
T cd07874 173 --FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 249 (355)
T ss_pred --cccCCccccCCccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHH
Confidence 22345678999999999976 578999999999999999999999999999999999999999988887766532111
Q ss_pred ccCC-----------CCCCcc--hhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCCC
Q 006004 392 ATSF-----------KPQQPY--KRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPLP 449 (665)
Q Consensus 392 ~~~~-----------~~~~p~--~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~~ 449 (665)
.... ....+. ...........+..+++||.+||..||.+|||+.|+|+||||.....+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~~~ 320 (355)
T cd07874 250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWYDP 320 (355)
T ss_pred HHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcccCh
Confidence 1000 000000 000011122356788999999999999999999999999999865433
No 46
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.3e-45 Score=395.49 Aligned_cols=286 Identities=34% Similarity=0.598 Sum_probs=233.9
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-----CC
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-----SG 231 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-----~~ 231 (665)
.++|++++.||.|+||.||+|.+..+++.||||++............+.+|+.+|++++||||+++++++... ..
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN 93 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence 3579999999999999999999999999999999875433334455677899999999999999999987643 13
Q ss_pred cEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 232 SLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
.+|++||++.+++...+. ...+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 94 ~~~~~~~~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 171 (343)
T cd07878 94 EVYLVTNLMGADLNNIVK--CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDE 171 (343)
T ss_pred cEEEEeecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCC
Confidence 579999999777665543 236999999999999999999999999999999999999999999999999999876432
Q ss_pred CCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 312 QNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 312 ~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
....+||+.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+....+.+..+++.......
T Consensus 172 ----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07878 172 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEH 247 (343)
T ss_pred ----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhh
Confidence 3456889999999999876678999999999999999999999999999999999999988888877765432222
Q ss_pred ccCCCCCCcc--hhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCC
Q 006004 392 ATSFKPQQPY--KRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPL 448 (665)
Q Consensus 392 ~~~~~~~~p~--~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~ 448 (665)
...+....+. ...+...+...++.+.+||.+||.+||.+|||+.++|+||||.....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~ 306 (343)
T cd07878 248 ARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHD 306 (343)
T ss_pred HHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCC
Confidence 1111110010 11123334567888999999999999999999999999999986543
No 47
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-46 Score=391.38 Aligned_cols=271 Identities=25% Similarity=0.405 Sum_probs=224.6
Q ss_pred CCCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEE
Q 006004 155 RRADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 155 ~~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~ 234 (665)
...+.|++...||.|.-++||+|++..++..||||++..+..+.+ ++.+.+|+..|+.++||||++++..|...+ .+|
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~~-~LW 100 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVDS-ELW 100 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEecc-eeE
Confidence 345689999999999999999999999999999999998775544 788999999999999999999999999876 799
Q ss_pred EEEEeccccchhhhcCC--CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC
Q 006004 235 LVFEYMEHDLAGLATTP--GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~~--~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~ 312 (665)
+||.||.++.+..+... ...|.|..+..++++++.||.|||.+|.||||||+.||||+.+|.|||+|||....+....
T Consensus 101 vVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 101 VVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred EeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 99999997655444432 1239999999999999999999999999999999999999999999999999887654322
Q ss_pred C---CCcccccccccccCcccc-cCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhc
Q 006004 313 N---LPLTSRVVTLWYRAPELL-LGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSK 388 (665)
Q Consensus 313 ~---~~~~~~~gT~~Y~APE~l-~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~ 388 (665)
. ....+++||++|||||++ ..-..|+.++|||||||+..||.+|+.||....+...+..-. .+.|+.-.
T Consensus 181 ~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tL--qn~pp~~~----- 253 (516)
T KOG0582|consen 181 DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTL--QNDPPTLL----- 253 (516)
T ss_pred ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHh--cCCCCCcc-----
Confidence 1 122567999999999995 445689999999999999999999999999887776554432 23332110
Q ss_pred cccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 389 SAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 389 ~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
+. ..-.+..+.++..++.+|..||.+||.+||||+++|+|+||+..
T Consensus 254 ----t~--------~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~ 299 (516)
T KOG0582|consen 254 ----TS--------GLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKA 299 (516)
T ss_pred ----cc--------cCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhc
Confidence 00 11123335688899999999999999999999999999999865
No 48
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.8e-45 Score=381.94 Aligned_cols=283 Identities=40% Similarity=0.685 Sum_probs=234.9
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+|++++.||+|+||.||+|++..+|+.||+|.++...........+.+|+.++++++||||+++++++.+.. .+|+|+|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDK-KLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCC-ceEEEEe
Confidence 489999999999999999999999999999999765433334455778999999999999999999998755 7999999
Q ss_pred eccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccc
Q 006004 239 YMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTS 318 (665)
Q Consensus 239 y~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~ 318 (665)
|+.++++..+......+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++..+..... ....
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~ 158 (284)
T cd07839 80 YCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR-CYSA 158 (284)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC-CcCC
Confidence 999988887766566799999999999999999999999999999999999999999999999999986643322 2334
Q ss_pred ccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCC-CCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCC
Q 006004 319 RVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPI-MPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKP 397 (665)
Q Consensus 319 ~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~p-F~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~ 397 (665)
..+++.|+|||++.+...++.++|||||||++|+|++|..| |.+.+..+.+..+.+.++.+....|............+
T Consensus 159 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd07839 159 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYP 238 (284)
T ss_pred CccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccC
Confidence 56789999999988766689999999999999999998765 67777788899999999988888776533222211112
Q ss_pred CCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 398 QQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 398 ~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
..+...........+++++.+||.+||..||.+|||+.++|.||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 239 MYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred CCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 2222222334455789999999999999999999999999999998
No 49
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.6e-45 Score=393.47 Aligned_cols=255 Identities=27% Similarity=0.385 Sum_probs=217.4
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~l 235 (665)
.++|++.+.||+|+||.||+|++..+++.||||++..... .....+.+.+|+.+|++++||||+++++++.... .+|+
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~l 95 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN-RVYF 95 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC-EEEE
Confidence 4579999999999999999999999999999999975432 2344567889999999999999999999998765 7999
Q ss_pred EEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 236 VFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 236 V~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||||+.++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++.......
T Consensus 96 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--- 172 (329)
T PTZ00263 96 LLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT--- 172 (329)
T ss_pred EEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc---
Confidence 99999876555444445579999999999999999999999999999999999999999999999999998764322
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
...+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+... .+
T Consensus 173 -~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~--~~---------------- 232 (329)
T PTZ00263 173 -FTLCGTPEYLAPEVIQS-KGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG--RL---------------- 232 (329)
T ss_pred -ceecCChhhcCHHHHcC-CCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC--Cc----------------
Confidence 34579999999999986 56799999999999999999999999988877766665431 00
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC-----HHHHHhCcCCCCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS-----AASALRSEFFKTE 446 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT-----a~eaL~Hp~f~~~ 446 (665)
.....++..+.+||.+||..||.+|++ +.++++||||...
T Consensus 233 -----------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 233 -----------KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred -----------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 011246788999999999999999997 7999999999863
No 50
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.2e-45 Score=387.04 Aligned_cols=254 Identities=25% Similarity=0.372 Sum_probs=216.5
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
++|++++.||+|+||.||+|++..+|+.||||++..... .....+.+.+|+.+|++++||||+++++++.+.. .+|+|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~lv 79 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQR-FLYML 79 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCC-eEEEE
Confidence 369999999999999999999999999999999975432 2234566889999999999999999999887754 79999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|||+.++.+..+......+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++...... .
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~----~ 155 (291)
T cd05612 80 MEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR----T 155 (291)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC----c
Confidence 999997655555445557999999999999999999999999999999999999999999999999999876432 2
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFK 396 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~ 396 (665)
...+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.... .
T Consensus 156 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~--~----------------- 215 (291)
T cd05612 156 WTLCGTPEYLAPEVIQS-KGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGK--L----------------- 215 (291)
T ss_pred ccccCChhhcCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--c-----------------
Confidence 34578999999999876 568999999999999999999999999988777766664311 0
Q ss_pred CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC-----HHHHHhCcCCCCC
Q 006004 397 PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS-----AASALRSEFFKTE 446 (665)
Q Consensus 397 ~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT-----a~eaL~Hp~f~~~ 446 (665)
.....+++.+++||++||..||.+|++ +.++++||||...
T Consensus 216 ----------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 260 (291)
T cd05612 216 ----------EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSV 260 (291)
T ss_pred ----------CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCC
Confidence 112346889999999999999999995 9999999999864
No 51
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.8e-45 Score=379.30 Aligned_cols=283 Identities=40% Similarity=0.732 Sum_probs=232.5
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+|++++.||+|+||.||+|++..++..||||+++...........+.+|+.++++++||||+++++++.... .+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQES-RLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCC-eEEEEEe
Confidence 489999999999999999999999999999998765444344456788999999999999999999998754 7899999
Q ss_pred eccccchhhhcCC--CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 239 YMEHDLAGLATTP--GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 239 y~~g~ll~~~~~~--~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|+.+++...+... +..+++.+++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++....... ...
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-~~~ 158 (285)
T cd07861 80 FLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV-RVY 158 (285)
T ss_pred cCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc-ccc
Confidence 9998776665432 2579999999999999999999999999999999999999999999999999998654322 122
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFK 396 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~ 396 (665)
....+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+....+.+....|............
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (285)
T cd07861 159 THEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNT 238 (285)
T ss_pred cCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhh
Confidence 34467899999999877666889999999999999999999999999998888888888888888777643221110000
Q ss_pred CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 397 PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 397 ~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
...............+++++.+||.+||..||.+|||+.++|.||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 239 FPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred ccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 00001112233445689999999999999999999999999999998
No 52
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=5.2e-45 Score=383.11 Aligned_cols=287 Identities=38% Similarity=0.691 Sum_probs=236.5
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
.++|++++.||.|+||.||+|++..+++.||+|.++..... .....+.+|+.+++.|+||||+++++++.... .+|+|
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~-~~~lv 82 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTEK-SLTLV 82 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEecCC-eEEEE
Confidence 45799999999999999999999999999999998754322 22334678999999999999999999998755 79999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|||+.+++...+......+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++........ ..
T Consensus 83 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~ 161 (301)
T cd07873 83 FEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-TY 161 (301)
T ss_pred EeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC-cc
Confidence 99999988877776666799999999999999999999999999999999999999999999999999976533221 22
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc-cCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA-TSF 395 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~-~~~ 395 (665)
....+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+++..+....+.+....|+....... ..+
T Consensus 162 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (301)
T cd07873 162 SNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSY 241 (301)
T ss_pred cccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccccc
Confidence 3346789999999988766788999999999999999999999999999999999999999998888875422111 000
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
....-....+......+++.+.+||.+||..||.+|||+.++|+||||...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~ 292 (301)
T cd07873 242 NYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL 292 (301)
T ss_pred ccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 000000111223334689999999999999999999999999999999753
No 53
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.2e-47 Score=376.36 Aligned_cols=259 Identities=29% Similarity=0.462 Sum_probs=228.2
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC------CHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCC
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM------DPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSG 231 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~------~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~ 231 (665)
.|+--+.||.|..++|.+|.++.+|..+|+|+|..... ..+..+.-.+|+.||+++ .||||++|.++|++..
T Consensus 18 ~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s- 96 (411)
T KOG0599|consen 18 KYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA- 96 (411)
T ss_pred hcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc-
Confidence 57777899999999999999999999999999864321 122344566899999998 6999999999999866
Q ss_pred cEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 232 SLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
.+++|+|+|..+-+..++.....++|.+.+.+|+||++|+.|||.++|+||||||+|||++++.++||.|||+|+.+.++
T Consensus 97 F~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~G 176 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPG 176 (411)
T ss_pred hhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCc
Confidence 88999999997766666666778999999999999999999999999999999999999999999999999999998776
Q ss_pred CCCCcccccccccccCcccccC-----CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhh
Q 006004 312 QNLPLTSRVVTLWYRAPELLLG-----ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRK 386 (665)
Q Consensus 312 ~~~~~~~~~gT~~Y~APE~l~~-----~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~ 386 (665)
.. +...||||+|+|||.+.. ...|+..+|+|++|||||.||.|.|||..+...-.+..|......+...-|
T Consensus 177 ek--LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speW-- 252 (411)
T KOG0599|consen 177 EK--LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEW-- 252 (411)
T ss_pred hh--HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcch--
Confidence 54 677899999999999864 357899999999999999999999999999998899999886655555444
Q ss_pred hccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCC
Q 006004 387 SKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKT 445 (665)
Q Consensus 387 ~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~ 445 (665)
.+++.+++|||.+||+.||.+|.|++|+|+||||..
T Consensus 253 -----------------------adis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q 288 (411)
T KOG0599|consen 253 -----------------------ADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ 288 (411)
T ss_pred -----------------------hhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence 478999999999999999999999999999999953
No 54
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.2e-45 Score=391.11 Aligned_cols=251 Identities=25% Similarity=0.388 Sum_probs=212.0
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEeccc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEH 242 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g 242 (665)
+.||+|+||.||+|++..+|+.||||+++.... .......+.+|+.+|++++||||+++++++.... .+||||||+.+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~-~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHD-RLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCC-EEEEEEeCCCC
Confidence 369999999999999999999999999975432 3344566789999999999999999999988765 79999999998
Q ss_pred cchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccccccc
Q 006004 243 DLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVVT 322 (665)
Q Consensus 243 ~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~gT 322 (665)
+.+.........+++.+++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++...... .......+||
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~-~~~~~~~~gt 158 (323)
T cd05571 80 GELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD-GATMKTFCGT 158 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC-CCcccceecC
Confidence 766555555568999999999999999999999999999999999999999999999999998754222 2223456799
Q ss_pred ccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcch
Q 006004 323 LWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYK 402 (665)
Q Consensus 323 ~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~ 402 (665)
+.|+|||++.+ ..|+.++|||||||++|+|++|+.||.+.+.......+....
T Consensus 159 ~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~-------------------------- 211 (323)
T cd05571 159 PEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE-------------------------- 211 (323)
T ss_pred ccccChhhhcC-CCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC--------------------------
Confidence 99999999876 678999999999999999999999999877666555543210
Q ss_pred hhhhhhccCCcHHHHHHHHHhcccCcCCCc-----CHHHHHhCcCCCCC
Q 006004 403 RKVLETFRNFPQSALALVDKLLTIEPENRG-----SAASALRSEFFKTE 446 (665)
Q Consensus 403 ~~~~~~~~~~s~~a~dLI~~lL~~DP~~Rp-----Ta~eaL~Hp~f~~~ 446 (665)
......+++++.+||.+||..||.+|+ ++.++|+||||...
T Consensus 212 ---~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~ 257 (323)
T cd05571 212 ---IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI 257 (323)
T ss_pred ---CCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 011235789999999999999999999 89999999999864
No 55
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2e-45 Score=397.04 Aligned_cols=261 Identities=33% Similarity=0.471 Sum_probs=216.3
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
++|++++.||+|+||.||+|++..+|+.||||++..... .......+.+|+.+|+.++||||+++++++.+.. .+|||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~-~~~lv 79 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDEN-YLYLI 79 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC-eEEEE
Confidence 369999999999999999999999999999999975432 3345566889999999999999999999998765 79999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC--
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL-- 314 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~-- 314 (665)
|||+.++.+..+......+++.+++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++..+......
T Consensus 80 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 159 (364)
T cd05599 80 MEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEF 159 (364)
T ss_pred ECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccccccc
Confidence 999987655554444557999999999999999999999999999999999999999999999999998765321100
Q ss_pred -----------------------------------CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCC
Q 006004 315 -----------------------------------PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPI 359 (665)
Q Consensus 315 -----------------------------------~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~p 359 (665)
...+.+||+.|+|||++.+ ..++.++|||||||++|+|++|.+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 160 YRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ-TGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred cccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcC-CCCCCeeeeecchhHHHHhhcCCCC
Confidence 1113479999999999876 6789999999999999999999999
Q ss_pred CCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC---HHH
Q 006004 360 MPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS---AAS 436 (665)
Q Consensus 360 F~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT---a~e 436 (665)
|.+.+..+.+..+...... ..+ | ....+++++++||.+||. ||.+|++ +.+
T Consensus 239 f~~~~~~~~~~~i~~~~~~--------------~~~----~-------~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ 292 (364)
T cd05599 239 FCSDNPQETYRKIINWKET--------------LQF----P-------DEVPLSPEAKDLIKRLCC-EAERRLGNNGVNE 292 (364)
T ss_pred CCCCCHHHHHHHHHcCCCc--------------cCC----C-------CCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHH
Confidence 9998887776666431100 000 0 011478999999999997 9999998 999
Q ss_pred HHhCcCCCCC
Q 006004 437 ALRSEFFKTE 446 (665)
Q Consensus 437 aL~Hp~f~~~ 446 (665)
+|+||||+..
T Consensus 293 ll~h~~~~~~ 302 (364)
T cd05599 293 IKSHPFFKGV 302 (364)
T ss_pred HhcCCCcCCC
Confidence 9999999874
No 56
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-46 Score=390.45 Aligned_cols=254 Identities=25% Similarity=0.458 Sum_probs=227.1
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
.+|++.+.||+|+||.|.+|++...|+.||||.|++..+ ++...-.+.+||+||..|+||||+++|++|+..+ .+.||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkd-KIviv 131 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKD-KIVIV 131 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCc-eEEEE
Confidence 369999999999999999999999999999999998776 4455667899999999999999999999999876 79999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|||..++.+..+....+.|+|.+++.|++||.+|+.|||.++|+|||||.+|||||.++++||+||||+..+.... .+
T Consensus 132 MEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k--fL 209 (668)
T KOG0611|consen 132 MEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK--FL 209 (668)
T ss_pred EEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhcccc--HH
Confidence 9999977666666666699999999999999999999999999999999999999999999999999999886543 47
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFK 396 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~ 396 (665)
+++||+|.|.+||++.|..+-++.+|.|||||+||.|+.|..||.|.+-...+.+|-.....
T Consensus 210 qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYr------------------ 271 (668)
T KOG0611|consen 210 QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYR------------------ 271 (668)
T ss_pred HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhccccc------------------
Confidence 89999999999999998766789999999999999999999999999988888887553110
Q ss_pred CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCC
Q 006004 397 PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFK 444 (665)
Q Consensus 397 ~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~ 444 (665)
.+.-|.++..||+.||-+||++|.|+.++..|=|..
T Consensus 272 ------------EP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 272 ------------EPETPSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred ------------CCCCCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 124577899999999999999999999999998875
No 57
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=9.5e-45 Score=383.54 Aligned_cols=276 Identities=36% Similarity=0.642 Sum_probs=216.4
Q ss_pred EEeeccCceEEEEEEEC--CCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-CCcEEEEEEec
Q 006004 164 DKIGQGTYSSVYKARDL--ETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-SGSLYLVFEYM 240 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~--~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-~~~l~lV~Ey~ 240 (665)
.+||+|+||.||+|+++ .+++.||+|.+...... ..+.+|+.+|++++||||+++++++... ...+|+||||+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS----MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA 82 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCCCc----HHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc
Confidence 58999999999999965 46789999998754322 3357899999999999999999988654 44689999999
Q ss_pred cccchhhhcC--------CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEE----cCCCcEEEEecccceec
Q 006004 241 EHDLAGLATT--------PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLI----NNAGVLKIGDFGLATTY 308 (665)
Q Consensus 241 ~g~ll~~~~~--------~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILl----d~~g~lKL~DFGlA~~~ 308 (665)
.+++...+.. ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..+
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07868 83 EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceecc
Confidence 9887665432 12358999999999999999999999999999999999999 45678999999999876
Q ss_pred CCCCC--CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCCh---------HHHHHHHHHhcC
Q 006004 309 DPSQN--LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTE---------VEQMHKIFKLCG 377 (665)
Q Consensus 309 ~~~~~--~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~---------~e~l~kI~~~~g 377 (665)
..... ......+||+.|+|||++.+...++.++|||||||++|+|++|++||.+... .+++..++..+|
T Consensus 163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T cd07868 163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 242 (317)
T ss_pred CCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcC
Confidence 43221 1234568899999999998766789999999999999999999999976543 467888999999
Q ss_pred CCChhHHhhhccccccC-----CCC----CCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 378 SPSEDYWRKSKSAHATS-----FKP----QQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 378 ~p~~~~~~~~~~~~~~~-----~~~----~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.+....|.......... +.. .......+.......+..+.+||.+||.+||.+|+|++|+|+||||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 243 FPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred CCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 99888887643211100 000 0000000111112346779999999999999999999999999998
No 58
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-46 Score=368.84 Aligned_cols=256 Identities=29% Similarity=0.446 Sum_probs=225.1
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHH-HHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEE
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPE-SVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~-~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~ 234 (665)
..++|++.+.||+|-||.||+|+.++++..||+|++-+..+... ....+.+|++|...|+||||+++|++|.+.. .+|
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~-riy 98 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK-RIY 98 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccc-eeE
Confidence 45789999999999999999999999999999999977654332 2356889999999999999999999999865 799
Q ss_pred EEEEecccc-chhhhc-CCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC
Q 006004 235 LVFEYMEHD-LAGLAT-TPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 235 lV~Ey~~g~-ll~~~~-~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~ 312 (665)
|++||...+ ++..+. ++..+|++.....|++|++.||.|||..+||||||||+|+|++..|.+||+|||.+.....+
T Consensus 99 LilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~- 177 (281)
T KOG0580|consen 99 LILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSN- 177 (281)
T ss_pred EEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCC-
Confidence 999999854 444433 36678999999999999999999999999999999999999999999999999999876422
Q ss_pred CCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc
Q 006004 313 NLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA 392 (665)
Q Consensus 313 ~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~ 392 (665)
...+.|||..|.|||+..+ ..++..+|+|++|++.||+|.|.+||...+..+.+.+|.+.--..
T Consensus 178 --kR~tlcgt~dyl~pEmv~~-~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~------------- 241 (281)
T KOG0580|consen 178 --KRKTLCGTLDYLPPEMVEG-RGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKF------------- 241 (281)
T ss_pred --CceeeecccccCCHhhcCC-CCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccC-------------
Confidence 2456799999999999987 678999999999999999999999999999999999997742211
Q ss_pred cCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCC
Q 006004 393 TSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKT 445 (665)
Q Consensus 393 ~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~ 445 (665)
...++.++.|||.+||.++|.+|.+..|++.|||...
T Consensus 242 ----------------p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 242 ----------------PSTISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred ----------------CcccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 1368999999999999999999999999999999864
No 59
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=4.3e-45 Score=395.30 Aligned_cols=261 Identities=28% Similarity=0.412 Sum_probs=215.1
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
++|++++.||+|+||+||+|++..+++.||||+++.... .......+.+|+.++..++||||+++++.+.+.. .+|||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~-~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKL-NLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCC-eEEEE
Confidence 379999999999999999999999999999999975432 2344567889999999999999999999998755 79999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC---
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN--- 313 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~--- 313 (665)
|||+.|+.+..+......+++.+++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++..+.....
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~ 159 (363)
T cd05628 80 MEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEF 159 (363)
T ss_pred EcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccc
Confidence 99999766555554556899999999999999999999999999999999999999999999999999876432110
Q ss_pred -------------------------------CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCC
Q 006004 314 -------------------------------LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPG 362 (665)
Q Consensus 314 -------------------------------~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g 362 (665)
......+||+.|+|||++.+ ..++.++|||||||+||||++|++||.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 160 YRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred cccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcC-CCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 01134589999999999986 5789999999999999999999999999
Q ss_pred CChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCC---CcCHHHHHh
Q 006004 363 RTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPEN---RGSAASALR 439 (665)
Q Consensus 363 ~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~---RpTa~eaL~ 439 (665)
.+..+.+.++....... .+++ ...+++++++||.+||. +|.+ ||++.++++
T Consensus 239 ~~~~~~~~~i~~~~~~~--------------~~p~-----------~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~ 292 (363)
T cd05628 239 ETPQETYKKVMNWKETL--------------IFPP-----------EVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKT 292 (363)
T ss_pred CCHHHHHHHHHcCcCcc--------------cCCC-----------cCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhC
Confidence 88887777765421100 0110 12478899999999886 5554 589999999
Q ss_pred CcCCCCC
Q 006004 440 SEFFKTE 446 (665)
Q Consensus 440 Hp~f~~~ 446 (665)
||||...
T Consensus 293 hp~f~~~ 299 (363)
T cd05628 293 NPFFEGV 299 (363)
T ss_pred CCCCCCC
Confidence 9999875
No 60
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=4.3e-45 Score=381.38 Aligned_cols=260 Identities=26% Similarity=0.388 Sum_probs=213.1
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCC-HHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMD-PESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~-~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
.|++++.||+|+||.||+|.+..+|+.||+|++...... ......+.+|+.++++++|+||+++++++...+ .+|+||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~-~~~lv~ 79 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKD-ALCLVL 79 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCC-eEEEEE
Confidence 388999999999999999999999999999998754432 223345778999999999999999999988755 799999
Q ss_pred Eeccccchh-hhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 238 EYMEHDLAG-LATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 238 Ey~~g~ll~-~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||+.++.+. .+.. ....+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... .
T Consensus 80 e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~--~ 157 (285)
T cd05631 80 TIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE--T 157 (285)
T ss_pred EecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC--e
Confidence 999976554 3322 23468999999999999999999999999999999999999999999999999998764322 2
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
....+||+.|+|||++.+ ..++.++|||||||+||+|++|+.||.+.+.......+........
T Consensus 158 ~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--------------- 221 (285)
T cd05631 158 VRGRVGTVGYMAPEVINN-EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQ--------------- 221 (285)
T ss_pred ecCCCCCCCccCHhhhcC-CCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccc---------------
Confidence 345578999999999986 6789999999999999999999999988765443333322211110
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC-----HHHHHhCcCCCCCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS-----AASALRSEFFKTEP 447 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT-----a~eaL~Hp~f~~~~ 447 (665)
......++.++.+||.+||+.||.+|++ ++++++||||....
T Consensus 222 ----------~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~ 268 (285)
T cd05631 222 ----------EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNIN 268 (285)
T ss_pred ----------ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence 1122368899999999999999999997 99999999998753
No 61
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=4.6e-45 Score=389.85 Aligned_cols=262 Identities=29% Similarity=0.437 Sum_probs=219.9
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
+|++++.||+|+||.||+|++..+++.||||+++.... .......+.+|+.++..++||||+++++++.... .+||||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~-~~~lv~ 80 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDE-YLYLAM 80 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCC-EEEEEE
Confidence 69999999999999999999999999999999975432 2234566889999999999999999999988755 799999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
||+.|+.+..+......+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..... ...
T Consensus 81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~----~~~ 156 (333)
T cd05600 81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT----YAN 156 (333)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc----ccC
Confidence 9999876666655556799999999999999999999999999999999999999999999999999987543 234
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKP 397 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~ 397 (665)
..+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+........ .+
T Consensus 157 ~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~---------------~~ 220 (333)
T cd05600 157 SVVGSPDYMAPEVLRG-KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQ---------------RP 220 (333)
T ss_pred CcccCccccChhHhcC-CCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccccc---------------CC
Confidence 5679999999999987 5789999999999999999999999999887777666543211000 00
Q ss_pred CCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCC
Q 006004 398 QQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEP 447 (665)
Q Consensus 398 ~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~ 447 (665)
.. ......+++++.+||.+||..+|.+|+++.++++||||....
T Consensus 221 ~~------~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~ 264 (333)
T cd05600 221 VY------DDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVD 264 (333)
T ss_pred CC------CccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCC
Confidence 00 000135789999999999999999999999999999998653
No 62
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=7.7e-45 Score=395.76 Aligned_cols=260 Identities=31% Similarity=0.426 Sum_probs=213.9
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
.|++++.||+|+||.||+|++..+++.||||++..... .......+.+|+.+++.++|||||++++++.+.. .+||||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~-~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD-NLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCC-EEEEEE
Confidence 59999999999999999999999999999999975432 3345667889999999999999999999998765 799999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC-----
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ----- 312 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~----- 312 (665)
|||.++.+..+......+++..++.++.||+.||.|||++||+||||||+||||+.+|.+||+|||++..+....
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~ 160 (382)
T cd05625 81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 160 (382)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccc
Confidence 999875554444444579999999999999999999999999999999999999999999999999975431100
Q ss_pred -----------------------------------------CCCcccccccccccCcccccCCcccCcccchhhhHHHHH
Q 006004 313 -----------------------------------------NLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILA 351 (665)
Q Consensus 313 -----------------------------------------~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLy 351 (665)
.....+.+||+.|+|||++.+ ..|+.++|||||||+||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlGvil~ 239 (382)
T cd05625 161 QSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILY 239 (382)
T ss_pred ccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcC-CCCCCeeeEEechHHHH
Confidence 000123579999999999986 57899999999999999
Q ss_pred HHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCC
Q 006004 352 ELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENR 431 (665)
Q Consensus 352 eLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~R 431 (665)
||++|++||.+.+..+...++....... .+ .....+++++.+||.+|+ .||.+|
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~--------------~~-----------p~~~~~s~~~~~li~~l~-~~p~~R 293 (382)
T cd05625 240 EMLVGQPPFLAQTPLETQMKVINWQTSL--------------HI-----------PPQAKLSPEASDLIIKLC-RGPEDR 293 (382)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHccCCCc--------------CC-----------CCcccCCHHHHHHHHHHc-cCHhHc
Confidence 9999999999988877766664311100 00 011357899999999987 599999
Q ss_pred cC---HHHHHhCcCCCCC
Q 006004 432 GS---AASALRSEFFKTE 446 (665)
Q Consensus 432 pT---a~eaL~Hp~f~~~ 446 (665)
++ +.++++||||+..
T Consensus 294 ~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 294 LGKNGADEIKAHPFFKTI 311 (382)
T ss_pred CCCCCHHHHhcCCCcCCc
Confidence 97 9999999999864
No 63
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=8.2e-45 Score=395.82 Aligned_cols=261 Identities=30% Similarity=0.412 Sum_probs=213.2
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
.|++++.||+|+||+||+|++..+++.||||+++.... .......+.+|+.+|+.++||||+++++++.+.. .+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~-~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKD-NLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCC-EEEEEE
Confidence 59999999999999999999999999999999976543 3445667889999999999999999999998765 799999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC----
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN---- 313 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~---- 313 (665)
||+.++.+..+......+++..++.++.||+.||.|||..||+||||||+||||+.++.+||+|||++..+.....
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~ 160 (381)
T cd05626 81 DYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYY 160 (381)
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccc
Confidence 9998765554444455799999999999999999999999999999999999999999999999999864321000
Q ss_pred ------------------------------------------CCcccccccccccCcccccCCcccCcccchhhhHHHHH
Q 006004 314 ------------------------------------------LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILA 351 (665)
Q Consensus 314 ------------------------------------------~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLy 351 (665)
....+.+||+.|+|||++.+ ..|+.++|||||||++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlG~il~ 239 (381)
T cd05626 161 QKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR-KGYTQLCDWWSVGVILF 239 (381)
T ss_pred cccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcC-CCCCCccceeehhhHHH
Confidence 01124579999999999876 56899999999999999
Q ss_pred HHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhccc--CcC
Q 006004 352 ELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTI--EPE 429 (665)
Q Consensus 352 eLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~--DP~ 429 (665)
||++|.+||.+.+..+...++....... . ......+++++++||.+||.. +|.
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~--------------~-----------~~~~~~~s~~~~dli~~ll~~~~~~~ 294 (381)
T cd05626 240 EMLVGQPPFLAPTPTETQLKVINWENTL--------------H-----------IPPQVKLSPEAVDLITKLCCSAEERL 294 (381)
T ss_pred HHHhCCCCCcCCCHHHHHHHHHcccccc--------------C-----------CCCCCCCCHHHHHHHHHHccCccccc
Confidence 9999999999888766666554311100 0 001125789999999997654 455
Q ss_pred CCcCHHHHHhCcCCCCC
Q 006004 430 NRGSAASALRSEFFKTE 446 (665)
Q Consensus 430 ~RpTa~eaL~Hp~f~~~ 446 (665)
.|+++.++|+||||...
T Consensus 295 ~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 295 GRNGADDIKAHPFFSEV 311 (381)
T ss_pred CCCCHHHHhcCcccCCC
Confidence 59999999999999864
No 64
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=8.6e-45 Score=406.39 Aligned_cols=282 Identities=23% Similarity=0.329 Sum_probs=222.3
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCC------CCcceeeeeeeccC
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDH------PNVMKLEGLVTSRS 230 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~H------pnIV~l~~~~~~~~ 230 (665)
.++|++++.||+|+||+||+|++..+++.||||+++... .....+..|+.+++.+.| .+|++++++|....
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~ 204 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNET 204 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCC
Confidence 467999999999999999999999999999999996422 223345667777777754 45899999998776
Q ss_pred CcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHh-CCccccCCCcccEEEcCCC--------------
Q 006004 231 GSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHS-RGILHRDIKGSNLLINNAG-------------- 295 (665)
Q Consensus 231 ~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~-~gIiHrDLKPeNILld~~g-------------- 295 (665)
..+|||||++.++++..+... ..+++.+++.++.||+.||.|||. .|||||||||+||||+.++
T Consensus 205 ~~~~iv~~~~g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~ 283 (467)
T PTZ00284 205 GHMCIVMPKYGPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPD 283 (467)
T ss_pred ceEEEEEeccCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCC
Confidence 689999999988888777654 479999999999999999999998 5999999999999998765
Q ss_pred --cEEEEecccceecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 006004 296 --VLKIGDFGLATTYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIF 373 (665)
Q Consensus 296 --~lKL~DFGlA~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~ 373 (665)
.+||+|||++..... .....+||+.|+|||++.+ ..|+.++|||||||+||||++|++||.+.+..+++..+.
T Consensus 284 ~~~vkl~DfG~~~~~~~----~~~~~~gt~~Y~APE~~~~-~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~ 358 (467)
T PTZ00284 284 PCRVRICDLGGCCDERH----SRTAIVSTRHYRSPEVVLG-LGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLME 358 (467)
T ss_pred CceEEECCCCccccCcc----ccccccCCccccCcHHhhc-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 499999998864322 2345689999999999987 578999999999999999999999999999999999999
Q ss_pred HhcCCCChhHHhhhcccccc----CCCCCCc-ch-hhhhhh-----c--cCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 374 KLCGSPSEDYWRKSKSAHAT----SFKPQQP-YK-RKVLET-----F--RNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 374 ~~~g~p~~~~~~~~~~~~~~----~~~~~~p-~~-~~~~~~-----~--~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
+.+|.++.+++......... ......+ +. ..+... + ....+.+.+||.+||.+||.+|+|+.|+|+|
T Consensus 359 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 359 KTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTH 438 (467)
T ss_pred HHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence 99999887765432111000 0000000 00 000000 0 0124668899999999999999999999999
Q ss_pred cCCCCCC
Q 006004 441 EFFKTEP 447 (665)
Q Consensus 441 p~f~~~~ 447 (665)
|||....
T Consensus 439 p~~~~~~ 445 (467)
T PTZ00284 439 PYVLKYY 445 (467)
T ss_pred ccccccC
Confidence 9998653
No 65
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=7.4e-45 Score=390.87 Aligned_cols=256 Identities=26% Similarity=0.340 Sum_probs=217.5
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCC-cEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcE
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETG-KIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSL 233 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g-~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l 233 (665)
..++|++++.||+|+||.||+|++..++ ..||+|++..... .......+.+|+.+++.++||||+++++++.... .+
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~-~~ 106 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES-YL 106 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC-EE
Confidence 3467999999999999999999976655 6899999875432 3344567889999999999999999999998765 79
Q ss_pred EEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC
Q 006004 234 YLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 234 ~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~ 313 (665)
|+||||+.++.+..+......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+...
T Consensus 107 ~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~-- 184 (340)
T PTZ00426 107 YLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR-- 184 (340)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC--
Confidence 999999987666555555567999999999999999999999999999999999999999999999999999876432
Q ss_pred CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccccc
Q 006004 314 LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHAT 393 (665)
Q Consensus 314 ~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~ 393 (665)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+.......+.....
T Consensus 185 --~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~---------------- 245 (340)
T PTZ00426 185 --TYTLCGTPEYIAPEILLN-VGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGII---------------- 245 (340)
T ss_pred --cceecCChhhcCHHHHhC-CCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC----------------
Confidence 234579999999999986 5689999999999999999999999999887776666643210
Q ss_pred CCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCc-----CHHHHHhCcCCCCC
Q 006004 394 SFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRG-----SAASALRSEFFKTE 446 (665)
Q Consensus 394 ~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~Rp-----Ta~eaL~Hp~f~~~ 446 (665)
.....+++.+.+||++||+.||.+|+ |+.++++||||...
T Consensus 246 -------------~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~ 290 (340)
T PTZ00426 246 -------------YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI 290 (340)
T ss_pred -------------CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 11235788999999999999999995 89999999999864
No 66
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=5.2e-45 Score=390.81 Aligned_cols=262 Identities=33% Similarity=0.480 Sum_probs=218.6
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
++|++++.||+|+||.||+|++..+|+.||||+++.... .......+.+|+.++..++||||+++++++.+.. .+|+|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~lv 79 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEE-HLYLV 79 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCC-eEEEE
Confidence 369999999999999999999999999999999976433 2244567889999999999999999999988755 79999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC----
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ---- 312 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~---- 312 (665)
|||+.++.+..+......+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++..+....
T Consensus 80 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (350)
T cd05573 80 MEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREY 159 (350)
T ss_pred EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccc
Confidence 9999875555444444679999999999999999999999999999999999999999999999999998764432
Q ss_pred ------------------------CCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHH
Q 006004 313 ------------------------NLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQ 368 (665)
Q Consensus 313 ------------------------~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~ 368 (665)
.......+||+.|+|||++.+ ..++.++|||||||+||+|++|+.||.+.+..+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 160 YLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG-TPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred cccccccccccccccccccccccccccccccccCccccCHHHHcC-CCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 112344579999999999987 5789999999999999999999999999887777
Q ss_pred HHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC-HHHHHhCcCCCCCC
Q 006004 369 MHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS-AASALRSEFFKTEP 447 (665)
Q Consensus 369 l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT-a~eaL~Hp~f~~~~ 447 (665)
..++....... . . .....+++++.+||.+||. ||.+|++ +.++|+||||+...
T Consensus 239 ~~~i~~~~~~~--------------~----~-------p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~~ 292 (350)
T cd05573 239 YNKIINWKESL--------------R----F-------PPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGID 292 (350)
T ss_pred HHHHhccCCcc--------------c----C-------CCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCCC
Confidence 66665411100 0 0 0112378999999999997 9999999 99999999998653
No 67
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=8.4e-45 Score=394.81 Aligned_cols=261 Identities=30% Similarity=0.466 Sum_probs=213.4
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
++|++++.||+|+||.||+|++..+++.||||++..... .......+.+|+.++++++||||++++++|.+.. .+|||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~-~~~lv 79 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQ-YLYLI 79 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-eeEEE
Confidence 369999999999999999999999999999999875432 3345667889999999999999999999998765 79999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC---
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN--- 313 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~--- 313 (665)
|||+.|+.+..+......+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++..+.....
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 159 (377)
T cd05629 80 MEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAY 159 (377)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence 99998765554444556799999999999999999999999999999999999999999999999999964321000
Q ss_pred -------------------------------------------CCcccccccccccCcccccCCcccCcccchhhhHHHH
Q 006004 314 -------------------------------------------LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCIL 350 (665)
Q Consensus 314 -------------------------------------------~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iL 350 (665)
....+.+||+.|+|||++.+ ..++.++|||||||+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil 238 (377)
T cd05629 160 YQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ-QGYGQECDWWSLGAIM 238 (377)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHcc-CCCCCceeeEecchhh
Confidence 00013579999999999876 5789999999999999
Q ss_pred HHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCC
Q 006004 351 AELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPEN 430 (665)
Q Consensus 351 yeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~ 430 (665)
|||++|.+||.+.+..+.+..+....... .+ | ....++.++.+||.+||. +|.+
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~--------------~~----p-------~~~~~s~~~~dli~~lL~-~~~~ 292 (377)
T cd05629 239 FECLIGWPPFCSENSHETYRKIINWRETL--------------YF----P-------DDIHLSVEAEDLIRRLIT-NAEN 292 (377)
T ss_pred hhhhcCCCCCCCCCHHHHHHHHHccCCcc--------------CC----C-------CCCCCCHHHHHHHHHHhc-CHhh
Confidence 99999999999988777776664311000 00 0 112478899999999998 7777
Q ss_pred C---cCHHHHHhCcCCCCC
Q 006004 431 R---GSAASALRSEFFKTE 446 (665)
Q Consensus 431 R---pTa~eaL~Hp~f~~~ 446 (665)
| +|+.++|+||||+..
T Consensus 293 r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 293 RLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred cCCCCCHHHHhcCCCcCCC
Confidence 5 599999999999864
No 68
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=7.3e-45 Score=394.93 Aligned_cols=260 Identities=30% Similarity=0.411 Sum_probs=213.0
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
+|++++.||+|+||.||+|++..+++.||||++..... .......+.+|+.+|++++||||+++++.+.... .+||||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~-~~~lv~ 80 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKD-NLYFVM 80 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-EEEEEE
Confidence 69999999999999999999999999999999865322 2234566889999999999999999999998755 899999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC-----
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ----- 312 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~----- 312 (665)
||+.++.+..+......+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||+|..+....
T Consensus 81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~ 160 (376)
T cd05598 81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 160 (376)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccc
Confidence 999876555554445579999999999999999999999999999999999999999999999999985332100
Q ss_pred -------------------------------------CCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh
Q 006004 313 -------------------------------------NLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA 355 (665)
Q Consensus 313 -------------------------------------~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt 355 (665)
.......+||+.|+|||++.+ ..++.++|||||||+||+|++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvilyell~ 239 (376)
T cd05598 161 QKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLV 239 (376)
T ss_pred ccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcC-CCCCcceeeeeccceeeehhh
Confidence 001123579999999999976 678999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCc---
Q 006004 356 GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRG--- 432 (665)
Q Consensus 356 G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~Rp--- 432 (665)
|++||.+.+..+....+....... .......+++.+.+||.+|+ .+|.+|+
T Consensus 240 G~~Pf~~~~~~~~~~~i~~~~~~~-------------------------~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~ 293 (376)
T cd05598 240 GQPPFLADTPAETQLKVINWETTL-------------------------HIPSQAKLSREASDLILRLC-CGAEDRLGKN 293 (376)
T ss_pred CCCCCCCCCHHHHHHHHhccCccc-------------------------cCCCCCCCCHHHHHHHHHHh-cCHhhcCCCC
Confidence 999999988776666553211000 00011357899999999987 5999999
Q ss_pred CHHHHHhCcCCCCC
Q 006004 433 SAASALRSEFFKTE 446 (665)
Q Consensus 433 Ta~eaL~Hp~f~~~ 446 (665)
|+.++|+||||+..
T Consensus 294 t~~ell~h~~~~~~ 307 (376)
T cd05598 294 GADEIKAHPFFKGI 307 (376)
T ss_pred CHHHHhCCCCcCCC
Confidence 99999999999864
No 69
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.9e-44 Score=391.90 Aligned_cols=264 Identities=26% Similarity=0.388 Sum_probs=219.3
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEE
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~ 234 (665)
..++|++++.||+|+||.||+|++..+++.||+|++..... .......+.+|+.+++.++||||+++++++.+.. .+|
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~-~~~ 119 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDK-YLY 119 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCC-EEE
Confidence 45689999999999999999999999999999999975432 2234456788999999999999999999988755 799
Q ss_pred EEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC
Q 006004 235 LVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL 314 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~ 314 (665)
+||||+.|+.+..+... ..+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++.........
T Consensus 120 lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~ 198 (370)
T cd05596 120 MVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMV 198 (370)
T ss_pred EEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcc
Confidence 99999987655555443 36899999999999999999999999999999999999999999999999999876543332
Q ss_pred CcccccccccccCcccccCC---cccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 315 PLTSRVVTLWYRAPELLLGA---TKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 315 ~~~~~~gT~~Y~APE~l~~~---~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
.....+||+.|+|||++.+. ..++.++|||||||+||+|++|++||.+.+....+.+|.......
T Consensus 199 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~------------ 266 (370)
T cd05596 199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSL------------ 266 (370)
T ss_pred cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcC------------
Confidence 33456799999999998753 347899999999999999999999999988877777765421100
Q ss_pred ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCC--CcCHHHHHhCcCCCCC
Q 006004 392 ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPEN--RGSAASALRSEFFKTE 446 (665)
Q Consensus 392 ~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~--RpTa~eaL~Hp~f~~~ 446 (665)
.+ .....++.++.+||.+||..+|.+ |+|+.++|+||||+..
T Consensus 267 --~~-----------~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 267 --TF-----------PDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred --CC-----------CCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 00 011257899999999999999998 9999999999999874
No 70
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=9.2e-44 Score=368.66 Aligned_cols=283 Identities=40% Similarity=0.694 Sum_probs=237.0
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+|++.+.||+|+||.||+|++..+|+.||+|++............+.+|+.++++++||||+++++++.... .+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGS-GFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCC-eeEEEec
Confidence 489999999999999999999999999999999876544455567889999999999999999999988754 7899999
Q ss_pred eccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccc
Q 006004 239 YMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTS 318 (665)
Q Consensus 239 y~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~ 318 (665)
|+.+++...+......+++.+++.++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++.............
T Consensus 80 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 159 (286)
T cd07832 80 YMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSH 159 (286)
T ss_pred ccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcccc
Confidence 99666666665555679999999999999999999999999999999999999999999999999998775443223445
Q ss_pred ccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccccc---CC
Q 006004 319 RVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHAT---SF 395 (665)
Q Consensus 319 ~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~---~~ 395 (665)
..++.+|+|||++.+...++.++|||||||++|+|++|.++|.+.++.+.+..+....+.+....|......... .+
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (286)
T cd07832 160 QVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITF 239 (286)
T ss_pred ccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccC
Confidence 578999999999877666799999999999999999999999999999999999999998888777653321110 11
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFK 444 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~ 444 (665)
.... ...+...+.+.+..+.+||.+||..||.+|||+.++|+||||.
T Consensus 240 ~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 240 PESK--PIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred CCCC--cchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 1111 1112344557789999999999999999999999999999994
No 71
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.4e-44 Score=381.17 Aligned_cols=248 Identities=29% Similarity=0.418 Sum_probs=209.3
Q ss_pred eeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEeccccc
Q 006004 166 IGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEHDL 244 (665)
Q Consensus 166 LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g~l 244 (665)
||+|+||.||+|++..+++.||+|+++.... .......+.+|+.+|++++||||+++++++.... .+|+||||+.++.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPE-KLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCC-eEEEEEcCCCCCc
Confidence 7999999999999999999999999975432 3345567789999999999999999999988754 7999999999866
Q ss_pred hhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccccccccc
Q 006004 245 AGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVVTLW 324 (665)
Q Consensus 245 l~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~gT~~ 324 (665)
+..+......+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ......+||+.
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~ 158 (312)
T cd05585 80 LFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTNTFCGTPE 158 (312)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC-CccccccCCcc
Confidence 65555555679999999999999999999999999999999999999999999999999998643222 22345679999
Q ss_pred ccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhh
Q 006004 325 YRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRK 404 (665)
Q Consensus 325 Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~ 404 (665)
|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+....+....
T Consensus 159 y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~---------------------------- 209 (312)
T cd05585 159 YLAPELLLG-HGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEP---------------------------- 209 (312)
T ss_pred cCCHHHHcC-CCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC----------------------------
Confidence 999999986 678999999999999999999999999887766665553310
Q ss_pred hhhhccCCcHHHHHHHHHhcccCcCCCc---CHHHHHhCcCCCC
Q 006004 405 VLETFRNFPQSALALVDKLLTIEPENRG---SAASALRSEFFKT 445 (665)
Q Consensus 405 ~~~~~~~~s~~a~dLI~~lL~~DP~~Rp---Ta~eaL~Hp~f~~ 445 (665)
......+++.+.+||.+||..||.+|+ ++.++|+||||..
T Consensus 210 -~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~ 252 (312)
T cd05585 210 -LRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQ 252 (312)
T ss_pred -CCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCC
Confidence 011235788999999999999999997 5899999999986
No 72
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.2e-44 Score=385.89 Aligned_cols=262 Identities=27% Similarity=0.387 Sum_probs=218.3
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
++|++.+.||+|+||.||+|++..+|+.||||+++.... ..+....+.+|+.+++.++||||+++++++.... .+|||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~-~~~lv 79 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKD-NLYLV 79 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCC-eEEEE
Confidence 369999999999999999999999999999999986543 3345567889999999999999999999988754 79999
Q ss_pred EEeccccchh-hhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 237 FEYMEHDLAG-LATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 237 ~Ey~~g~ll~-~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
|||++++.+. .+......+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++..+.......
T Consensus 80 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 159 (330)
T cd05601 80 MEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVN 159 (330)
T ss_pred ECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCcee
Confidence 9999875544 444443679999999999999999999999999999999999999999999999999998775443333
Q ss_pred cccccccccccCcccccC-----CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccc
Q 006004 316 LTSRVVTLWYRAPELLLG-----ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSA 390 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~-----~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~ 390 (665)
.....||+.|+|||++.. ...++.++|||||||++|+|++|..||.+.+..+.+.++.......
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~----------- 228 (330)
T cd05601 160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFL----------- 228 (330)
T ss_pred eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCcc-----------
Confidence 334578999999999863 3567899999999999999999999999888777776664421000
Q ss_pred cccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 391 HATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 391 ~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
. . .....+++.+.+||..||. ||.+|+|+.++++||||...
T Consensus 229 ---~----~-------~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 229 ---K----F-------PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred ---C----C-------CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 0 0 0113578999999999998 99999999999999999864
No 73
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.2e-44 Score=384.15 Aligned_cols=262 Identities=27% Similarity=0.421 Sum_probs=209.5
Q ss_pred CeeEEEEeeccCceEEEEEEEC---CCCcEEEEEEEecCCC--CHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCc
Q 006004 159 AFEKIDKIGQGTYSSVYKARDL---ETGKIVALKKVRFANM--DPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGS 232 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~---~~g~~vAiK~i~~~~~--~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~ 232 (665)
+|++++.||+|+||.||++++. .+++.||+|++..... .....+.+.+|+.+|+.+ .||||+++++++.... .
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~ 79 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEA-K 79 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCC-E
Confidence 4899999999999999999864 5789999999975432 223345678899999999 5999999999988754 7
Q ss_pred EEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC
Q 006004 233 LYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~ 312 (665)
+|+||||+.++.+.........+++.+++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++..+....
T Consensus 80 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~ 159 (332)
T cd05614 80 LHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE 159 (332)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccC
Confidence 89999999976555444445579999999999999999999999999999999999999999999999999998764433
Q ss_pred CCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc
Q 006004 313 NLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA 392 (665)
Q Consensus 313 ~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~ 392 (665)
.......+||+.|+|||++.+...++.++|||||||+||+|++|+.||...........+......
T Consensus 160 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~-------------- 225 (332)
T cd05614 160 KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK-------------- 225 (332)
T ss_pred CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc--------------
Confidence 333345689999999999987556889999999999999999999999754322111111110000
Q ss_pred cCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCc-----CHHHHHhCcCCCCC
Q 006004 393 TSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRG-----SAASALRSEFFKTE 446 (665)
Q Consensus 393 ~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~Rp-----Ta~eaL~Hp~f~~~ 446 (665)
..+ .....+++.+.+||.+||..||.+|+ ++.++|+||||+..
T Consensus 226 --~~~---------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 226 --CDP---------PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred --CCC---------CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 000 11135788999999999999999999 88999999999864
No 74
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3e-44 Score=383.71 Aligned_cols=251 Identities=25% Similarity=0.404 Sum_probs=211.2
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEeccc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEH 242 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g 242 (665)
+.||+|+||.||++++..+|+.||+|++..... .......+.+|+.+|+.++||||+++++++.... .+||||||+.+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKD-RLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC-EEEEEEeCCCC
Confidence 369999999999999999999999999975432 3345567789999999999999999999988765 79999999998
Q ss_pred cchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccccccc
Q 006004 243 DLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVVT 322 (665)
Q Consensus 243 ~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~gT 322 (665)
+.+.........+++.+++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++...... .......+||
T Consensus 80 g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~~~~gt 158 (328)
T cd05593 80 GELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD-AATMKTFCGT 158 (328)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc-ccccccccCC
Confidence 766655555567999999999999999999999999999999999999999999999999998764322 1223456799
Q ss_pred ccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcch
Q 006004 323 LWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYK 402 (665)
Q Consensus 323 ~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~ 402 (665)
+.|+|||++.+ ..++.++|||||||+||+|++|+.||.+.+..+....+....
T Consensus 159 ~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~-------------------------- 211 (328)
T cd05593 159 PEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED-------------------------- 211 (328)
T ss_pred cCccChhhhcC-CCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCC--------------------------
Confidence 99999999876 578999999999999999999999998877665555442210
Q ss_pred hhhhhhccCCcHHHHHHHHHhcccCcCCCc-----CHHHHHhCcCCCCC
Q 006004 403 RKVLETFRNFPQSALALVDKLLTIEPENRG-----SAASALRSEFFKTE 446 (665)
Q Consensus 403 ~~~~~~~~~~s~~a~dLI~~lL~~DP~~Rp-----Ta~eaL~Hp~f~~~ 446 (665)
......+++++.+||.+||.+||.+|+ ++.++|+||||...
T Consensus 212 ---~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 212 ---IKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred ---ccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 011235789999999999999999997 89999999999863
No 75
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=4.3e-44 Score=389.36 Aligned_cols=265 Identities=26% Similarity=0.372 Sum_probs=217.7
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEE
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~ 234 (665)
..++|++++.||+|+||.||++++..+++.||+|++..... .......+.+|+.+++.++||||+++++++.+.. .+|
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~-~~~ 119 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK-YLY 119 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-EEE
Confidence 34679999999999999999999999999999999975322 2334456789999999999999999999998755 799
Q ss_pred EEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC
Q 006004 235 LVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL 314 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~ 314 (665)
+||||+.++.+..+.... .+++.+++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+|..+......
T Consensus 120 lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~ 198 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV 198 (370)
T ss_pred EEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCce
Confidence 999999876555444433 6899999999999999999999999999999999999999999999999999877543333
Q ss_pred CcccccccccccCcccccCC---cccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 315 PLTSRVVTLWYRAPELLLGA---TKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 315 ~~~~~~gT~~Y~APE~l~~~---~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
.....+||+.|+|||++.+. ..++.++|||||||+||+|++|++||.+.+....+.+|........
T Consensus 199 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~----------- 267 (370)
T cd05621 199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLN----------- 267 (370)
T ss_pred ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccC-----------
Confidence 33456899999999998753 2478999999999999999999999999888777777654211100
Q ss_pred ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCC--CcCHHHHHhCcCCCCCC
Q 006004 392 ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPEN--RGSAASALRSEFFKTEP 447 (665)
Q Consensus 392 ~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~--RpTa~eaL~Hp~f~~~~ 447 (665)
. .....++..+++||..||..++.+ |+|+.++|+||||+...
T Consensus 268 -------~-------p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~~ 311 (370)
T cd05621 268 -------F-------PEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQ 311 (370)
T ss_pred -------C-------CCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCCC
Confidence 0 011247889999999999866544 89999999999998743
No 76
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.6e-44 Score=382.12 Aligned_cols=251 Identities=27% Similarity=0.399 Sum_probs=211.9
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEeccc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEH 242 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g 242 (665)
+.||+|+||.||++++..+|+.||+|+++.... .......+.+|+.+++.++||||++++++|.... .+||||||+.+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~-~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD-RLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCC-EEEEEEeCCCC
Confidence 369999999999999999999999999975432 3344566788999999999999999999998765 79999999998
Q ss_pred cchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccccccc
Q 006004 243 DLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVVT 322 (665)
Q Consensus 243 ~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~gT 322 (665)
+.+.........+++.+++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++...... ........||
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~gt 158 (323)
T cd05595 80 GELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GATMKTFCGT 158 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC-CCccccccCC
Confidence 766655555567999999999999999999999999999999999999999999999999998754222 1223446799
Q ss_pred ccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcch
Q 006004 323 LWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYK 402 (665)
Q Consensus 323 ~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~ 402 (665)
+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+.....
T Consensus 159 ~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~------------------------- 212 (323)
T cd05595 159 PEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI------------------------- 212 (323)
T ss_pred cCcCCcccccC-CCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-------------------------
Confidence 99999999876 5789999999999999999999999988877666665532100
Q ss_pred hhhhhhccCCcHHHHHHHHHhcccCcCCCc-----CHHHHHhCcCCCCC
Q 006004 403 RKVLETFRNFPQSALALVDKLLTIEPENRG-----SAASALRSEFFKTE 446 (665)
Q Consensus 403 ~~~~~~~~~~s~~a~dLI~~lL~~DP~~Rp-----Ta~eaL~Hp~f~~~ 446 (665)
.....+++++.+||.+||.+||.+|+ ++.++|+|+||...
T Consensus 213 ----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 213 ----RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred ----CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence 01235789999999999999999998 89999999999864
No 77
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.8e-44 Score=388.34 Aligned_cols=262 Identities=29% Similarity=0.419 Sum_probs=216.1
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
++|++++.||+|+||.||+|++..+++.||||+++.... ..+....+.+|+.++..++||||+++++.+.+.. .+|||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~-~~~lv 79 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKR-NLYLI 79 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-EEEEE
Confidence 469999999999999999999999999999999975432 3345667889999999999999999999998765 79999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC---
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN--- 313 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~--- 313 (665)
|||+.|+.+..+......+++..++.|+.||+.||.|||++||+||||||+||||+.+|.+||+|||++..+.....
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~ 159 (360)
T cd05627 80 MEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEF 159 (360)
T ss_pred EeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccccccccc
Confidence 99999766655554555799999999999999999999999999999999999999999999999999875432110
Q ss_pred -------------------------------CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCC
Q 006004 314 -------------------------------LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPG 362 (665)
Q Consensus 314 -------------------------------~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g 362 (665)
......+||+.|+|||++.+ ..++.++|||||||+||+|++|++||.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 160 YRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred ccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcC-CCCCCcceeccccceeeecccCCCCCCC
Confidence 01124579999999999986 6789999999999999999999999999
Q ss_pred CChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCc---CHHHHHh
Q 006004 363 RTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRG---SAASALR 439 (665)
Q Consensus 363 ~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~Rp---Ta~eaL~ 439 (665)
.+..+.+.++...... ..++ ....+++++++||.+|+. ||.+|+ ++.++++
T Consensus 239 ~~~~~~~~~i~~~~~~--------------~~~p-----------~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 239 ETPQETYRKVMNWKET--------------LVFP-----------PEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKS 292 (360)
T ss_pred CCHHHHHHHHHcCCCc--------------eecC-----------CCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhc
Confidence 8887777666431000 0000 012478899999999874 999998 4899999
Q ss_pred CcCCCCCC
Q 006004 440 SEFFKTEP 447 (665)
Q Consensus 440 Hp~f~~~~ 447 (665)
||||....
T Consensus 293 hp~f~~~~ 300 (360)
T cd05627 293 HPFFEGVD 300 (360)
T ss_pred CCCCCCCC
Confidence 99999754
No 78
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-45 Score=386.26 Aligned_cols=258 Identities=26% Similarity=0.504 Sum_probs=234.8
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
.-|.+.+.||+|.|++|.+|++.-||..||||+|.+..++.-....+..|+..|+.+.|||||+||+++..+. .+|||+
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQT-KlyLiL 96 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQT-KLYLIL 96 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccc-eEEEEE
Confidence 3599999999999999999999999999999999988887777778899999999999999999999988765 799999
Q ss_pred Eeccc-cchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEE-cCCCcEEEEecccceecCCCCCCC
Q 006004 238 EYMEH-DLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLI-NNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 238 Ey~~g-~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILl-d~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
|+-++ ++.+++.+....+.|+.+++|+.||+.|+.|||+..||||||||+|+.+ ..-|.+||.|||++..+.++..
T Consensus 97 ELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~k-- 174 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKK-- 174 (864)
T ss_pred EecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcch--
Confidence 99986 7888888877789999999999999999999999999999999999766 4679999999999999887655
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
+++.||++.|.|||+++|..+..+++||||||||||.|++|++||+..++.+.+..|+....+
T Consensus 175 L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYt----------------- 237 (864)
T KOG4717|consen 175 LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYT----------------- 237 (864)
T ss_pred hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccccc-----------------
Confidence 788999999999999999777778999999999999999999999999999999999764222
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEP 447 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~ 447 (665)
.+.+++.++++||..||..||.+|.+.+++..|+|++...
T Consensus 238 ------------vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D 277 (864)
T KOG4717|consen 238 ------------VPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGD 277 (864)
T ss_pred ------------CchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCC
Confidence 2247899999999999999999999999999999998653
No 79
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.1e-43 Score=368.59 Aligned_cols=281 Identities=41% Similarity=0.752 Sum_probs=230.6
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+|++++.||.|+||.||+|++..+|+.||||+++...........+.+|++++++++||||+++++++.... .+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN-KLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCC-cEEEEee
Confidence 489999999999999999999999999999998765443344456789999999999999999999987654 7899999
Q ss_pred eccccchhhhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 239 YMEHDLAGLATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 239 y~~g~ll~~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
|+.+++...+.. ....+++.++..++.||+.||+|||+.|++|+||+|+|||++.++.+||+|||++..+.... ....
T Consensus 80 ~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~-~~~~ 158 (284)
T cd07860 80 FLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYT 158 (284)
T ss_pred ccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc-cccc
Confidence 998876665543 34568999999999999999999999999999999999999999999999999988664322 1223
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc--cCC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA--TSF 395 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~--~~~ 395 (665)
...+++.|+|||++.+...++.++|||||||++|+|++|+.||.+.++.+.+.++.+..+.+....|........ ..+
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd07860 159 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSF 238 (284)
T ss_pred cccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhc
Confidence 346789999999987756678899999999999999999999999999999999999888888777754321110 001
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.. ............+++++++||.+||..||.+|||+.++|.||||
T Consensus 239 ~~--~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 239 PK--WARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred cc--ccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 00 00111223345688999999999999999999999999999998
No 80
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=8.8e-44 Score=378.80 Aligned_cols=254 Identities=26% Similarity=0.405 Sum_probs=212.3
Q ss_pred eeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHH---HhCCCCCcceeeeeeeccCCcEEE
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHIL---RKLDHPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL---~~L~HpnIV~l~~~~~~~~~~l~l 235 (665)
|++++.||+|+||.||+|++..+++.||||+++.... .....+.+.+|+.++ +.++||||+++++++.... .+|+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~-~~~l 79 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTED-HVCF 79 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC-EEEE
Confidence 7889999999999999999999999999999975432 233455667777665 4668999999999998755 7999
Q ss_pred EEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 236 VFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 236 V~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||||+.++.+...... ..+++.++..++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ..
T Consensus 80 v~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~ 157 (324)
T cd05589 80 VMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG-DR 157 (324)
T ss_pred EEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC-Cc
Confidence 9999998766555543 369999999999999999999999999999999999999999999999999987543222 22
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.....
T Consensus 158 ~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~------------------ 218 (324)
T cd05589 158 TSTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEV------------------ 218 (324)
T ss_pred ccccccCccccCHhHhcC-CCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC------------------
Confidence 345679999999999876 5789999999999999999999999999887777766543110
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCc-----CHHHHHhCcCCCCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRG-----SAASALRSEFFKTE 446 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~Rp-----Ta~eaL~Hp~f~~~ 446 (665)
.....+++.+.+||.+||..||.+|| ++.++++||||+..
T Consensus 219 -----------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 219 -----------RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred -----------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 01135788999999999999999999 79999999999864
No 81
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.5e-43 Score=371.49 Aligned_cols=287 Identities=46% Similarity=0.830 Sum_probs=234.8
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC------
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS------ 230 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~------ 230 (665)
.++|++++.||+|+||.||+|++..+++.||||++............+.+|+++++.++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 45899999999999999999999999999999998755433222344678999999999999999999875443
Q ss_pred -CcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecC
Q 006004 231 -GSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYD 309 (665)
Q Consensus 231 -~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~ 309 (665)
..+|+||||+.+++...+......+++.+++.++.||+.||.|||++||+|+||||+|||+++++.+||+|||++....
T Consensus 87 ~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 166 (311)
T cd07866 87 RGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYD 166 (311)
T ss_pred CceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhcc
Confidence 2479999999998888777666689999999999999999999999999999999999999999999999999998654
Q ss_pred CCCC----------CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCC
Q 006004 310 PSQN----------LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSP 379 (665)
Q Consensus 310 ~~~~----------~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p 379 (665)
.... ...+...+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+.......+...++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 246 (311)
T cd07866 167 GPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTP 246 (311)
T ss_pred CCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 3221 112344678999999998765668999999999999999999999999999999999999999888
Q ss_pred ChhHHhhhccccccCC-CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 380 SEDYWRKSKSAHATSF-KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 380 ~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.+..|........... .........+...+..+++.+.+||.+||..||.+|||+.++|.||||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 247 TEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred ChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 7776654322211110 001111222334456677899999999999999999999999999998
No 82
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-46 Score=392.50 Aligned_cols=256 Identities=29% Similarity=0.459 Sum_probs=223.0
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
..|+.++.||+|+||.||+|.+..+++.||+|++..... ...+..+++|+.+|.+++++||.++|+.|.... .++++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~-~deIediqqei~~Ls~~~~~~it~yygsyl~g~-~LwiiM 90 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA-EDEIEDIQQEISVLSQCDSPNITEYYGSYLKGT-KLWIIM 90 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhc-chhhHHHHHHHHHHHhcCcchHHhhhhheeecc-cHHHHH
Confidence 368899999999999999999999999999999987654 345677899999999999999999999998765 799999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
|||.|+....++..+..+.|.++..++++++.||.|||..+.+|||||+.||||..+|.+||+|||++..+....... .
T Consensus 91 ey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr-~ 169 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR-K 169 (467)
T ss_pred HHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcc-c
Confidence 999998887777777777999999999999999999999999999999999999999999999999999886655444 7
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKP 397 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~ 397 (665)
+++|||.|||||++.+ ..|+.++||||||++.|||++|.||+....+.-.+-.|-+ ..+|
T Consensus 170 tfvGTPfwMAPEVI~~-~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk-------------------~~PP 229 (467)
T KOG0201|consen 170 TFVGTPFWMAPEVIKQ-SGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPK-------------------SAPP 229 (467)
T ss_pred cccccccccchhhhcc-ccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccC-------------------CCCC
Confidence 7899999999999995 7899999999999999999999999988765222111111 1111
Q ss_pred CCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCC
Q 006004 398 QQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKT 445 (665)
Q Consensus 398 ~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~ 445 (665)
.+-..+++.+++||..||++||+.||+|.++|+|+|++.
T Consensus 230 ---------~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 230 ---------RLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred ---------ccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 112378999999999999999999999999999999987
No 83
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.7e-44 Score=382.89 Aligned_cols=251 Identities=24% Similarity=0.390 Sum_probs=210.8
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEeccc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEH 242 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g 242 (665)
+.||+|+||.||+|++..+|+.||+|++..... .......+.+|+.+++.++||||+++++++.... .+||||||+.+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~-~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD-RLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCC-EEEEEEeCCCC
Confidence 369999999999999999999999999975432 2334556778999999999999999999988765 79999999998
Q ss_pred cchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHh-CCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccccc
Q 006004 243 DLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHS-RGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVV 321 (665)
Q Consensus 243 ~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~-~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~g 321 (665)
+.+.........+++.+++.++.||+.||.|||+ .||+||||||+||||+.++.+||+|||++....... ......+|
T Consensus 80 ~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~g 158 (325)
T cd05594 80 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-ATMKTFCG 158 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-cccccccC
Confidence 7666655555679999999999999999999997 799999999999999999999999999987643221 22344579
Q ss_pred cccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcc
Q 006004 322 TLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPY 401 (665)
Q Consensus 322 T~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~ 401 (665)
|+.|+|||++.+ ..++.++|||||||+||+|++|..||.+.+..+....+....
T Consensus 159 t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~------------------------- 212 (325)
T cd05594 159 TPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE------------------------- 212 (325)
T ss_pred CcccCCHHHHcc-CCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCC-------------------------
Confidence 999999999976 578999999999999999999999999887666555543210
Q ss_pred hhhhhhhccCCcHHHHHHHHHhcccCcCCCc-----CHHHHHhCcCCCCC
Q 006004 402 KRKVLETFRNFPQSALALVDKLLTIEPENRG-----SAASALRSEFFKTE 446 (665)
Q Consensus 402 ~~~~~~~~~~~s~~a~dLI~~lL~~DP~~Rp-----Ta~eaL~Hp~f~~~ 446 (665)
......+++++.+||.+||.+||.+|+ ++.++|+||||...
T Consensus 213 ----~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 213 ----IRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred ----CCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 001135788999999999999999997 99999999999864
No 84
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.6e-43 Score=368.70 Aligned_cols=290 Identities=42% Similarity=0.732 Sum_probs=236.4
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCC---HHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMD---PESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~---~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~l 235 (665)
+|++++.||+|+||.||+|.+..+|+.||||.++..... ......+..|++++++++|+||+++++++... ..+|+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~~l 79 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHK-SNINL 79 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecC-CEEEE
Confidence 488999999999999999999999999999999765433 23345567899999999999999999999875 47999
Q ss_pred EEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 236 VFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 236 V~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||||+.+++...+......+++.++..++.||+.||.|||++||+|+||||+|||++.++.+||+|||++........ .
T Consensus 80 v~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~-~ 158 (298)
T cd07841 80 VFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR-K 158 (298)
T ss_pred EEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCc-c
Confidence 999996666666554434799999999999999999999999999999999999999999999999999987654321 2
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
.....+++.|+|||.+.+...++.++|+|||||++|+|++|.++|.+.++.+.+.++...++.+....|..........
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 237 (298)
T cd07841 159 MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYV- 237 (298)
T ss_pred ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccc-
Confidence 3334668899999998765678999999999999999999999999999999999998888888777775432221110
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCCCCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPLPCD 451 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~~~~ 451 (665)
.............+...+..+.+||.+||.+||.+|||+.++|.|+||.+.+.+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~~ 293 (298)
T cd07841 238 EFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPTP 293 (298)
T ss_pred cccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCCC
Confidence 00011111123344567899999999999999999999999999999998776543
No 85
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.4e-43 Score=378.86 Aligned_cols=264 Identities=23% Similarity=0.356 Sum_probs=215.1
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCC-CCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFAN-MDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
++|++++.||+|+||.||++++..+++.||||++.... ......+.+.+|+.+++.++|+||+++++++.... .+|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDEN-NLYLV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCC-eEEEE
Confidence 47999999999999999999999999999999997532 23334566888999999999999999999998764 89999
Q ss_pred EEeccccch-hhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 237 FEYMEHDLA-GLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 237 ~Ey~~g~ll-~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
|||+.++.+ ..+......+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++..+.......
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (331)
T cd05597 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ 159 (331)
T ss_pred EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc
Confidence 999986544 4444445579999999999999999999999999999999999999999999999999998765433322
Q ss_pred cccccccccccCcccccC----CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 316 LTSRVVTLWYRAPELLLG----ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~----~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
....+||+.|+|||++.. ...++.++|||||||++|+|++|+.||.+.+..+.+.++.......
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~------------ 227 (331)
T cd05597 160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHF------------ 227 (331)
T ss_pred ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcc------------
Confidence 333578999999999863 2457889999999999999999999999888777766664321100
Q ss_pred ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCC--CcCHHHHHhCcCCCCC
Q 006004 392 ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPEN--RGSAASALRSEFFKTE 446 (665)
Q Consensus 392 ~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~--RpTa~eaL~Hp~f~~~ 446 (665)
. +......++..+++||.+||..++.+ |+++.++|+||||...
T Consensus 228 --~----------~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 228 --Q----------FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred --c----------CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 0 00112348899999999999765544 7899999999999864
No 86
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.1e-43 Score=378.09 Aligned_cols=256 Identities=26% Similarity=0.400 Sum_probs=214.2
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCC-CcceeeeeeeccCCcEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHP-NVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~Hp-nIV~l~~~~~~~~~~l~lV 236 (665)
+|++++.||+|+||.||+|++..+++.||||+++.... .....+.+..|+.++..+.|+ +|+++++++...+ .+|+|
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~-~~~lv 79 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD-RLYFV 79 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCC-EEEEE
Confidence 48999999999999999999999999999999976432 234456678899999999765 5788888887654 79999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|||+.++.+.........+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ...
T Consensus 80 ~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~~ 158 (324)
T cd05587 80 MEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG-KTT 158 (324)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC-Cce
Confidence 9999976665555555579999999999999999999999999999999999999999999999999987542221 123
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFK 396 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~ 396 (665)
...+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+.....
T Consensus 159 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~------------------- 218 (324)
T cd05587 159 RTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV------------------- 218 (324)
T ss_pred eeecCCccccChhhhcC-CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-------------------
Confidence 44579999999999986 5689999999999999999999999999888777776643210
Q ss_pred CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCH-----HHHHhCcCCCCC
Q 006004 397 PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSA-----ASALRSEFFKTE 446 (665)
Q Consensus 397 ~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa-----~eaL~Hp~f~~~ 446 (665)
.....+++.+.+||.+||.+||.+|+++ .++++||||...
T Consensus 219 ----------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 219 ----------SYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred ----------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 1113578899999999999999999986 899999999863
No 87
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.3e-43 Score=363.70 Aligned_cols=280 Identities=36% Similarity=0.638 Sum_probs=228.4
Q ss_pred eeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCC-CCCcceeeeeeecc-CCcEEEEE
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLD-HPNVMKLEGLVTSR-SGSLYLVF 237 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~-~~~l~lV~ 237 (665)
|++++.||+|+||.||++.+..+++.||+|+++......... ...+|+.+++++. |+||+++++++.+. .+.+++||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~-~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~ 79 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQV-NNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF 79 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhh-hHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence 788999999999999999999999999999987543332222 3457999999985 99999999998875 24799999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
||+.++++..+......+++.++..++.||+.||.|||+.||+|+||||+|||++. +.+||+|||++..+.... ...
T Consensus 80 e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~--~~~ 156 (282)
T cd07831 80 ELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP--PYT 156 (282)
T ss_pred ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCC--CcC
Confidence 99999888877765567999999999999999999999999999999999999999 999999999998764322 223
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKP 397 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~ 397 (665)
...+++.|+|||++.....++.++|||||||++|+|++|.+||.+.+..+.+..+....+.+....+..........+..
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07831 157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNF 236 (282)
T ss_pred CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccC
Confidence 45689999999987655667899999999999999999999999999999999999988888876543322221111111
Q ss_pred CCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 398 QQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 398 ~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.......+......++..+.+||.+||.+||.+|||+.++|+||||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 1111112223344679999999999999999999999999999998
No 88
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.1e-43 Score=371.30 Aligned_cols=276 Identities=35% Similarity=0.647 Sum_probs=214.7
Q ss_pred EEeeccCceEEEEEEECC--CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-CCcEEEEEEec
Q 006004 164 DKIGQGTYSSVYKARDLE--TGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-SGSLYLVFEYM 240 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~--~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-~~~l~lV~Ey~ 240 (665)
.+||+|+||.||+|++.. ++..||+|.+..... ...+.+|+.+|+.++||||+++++++... ...+|+||||+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA 82 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee
Confidence 589999999999999654 568899999875432 23467899999999999999999988643 45789999999
Q ss_pred cccchhhhcC--------CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEE----cCCCcEEEEecccceec
Q 006004 241 EHDLAGLATT--------PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLI----NNAGVLKIGDFGLATTY 308 (665)
Q Consensus 241 ~g~ll~~~~~--------~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILl----d~~g~lKL~DFGlA~~~ 308 (665)
.+++...+.. ....+++..++.++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||+++.+
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07867 83 EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceecc
Confidence 9987765532 12358999999999999999999999999999999999999 56679999999999876
Q ss_pred CCCCC--CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCCh---------HHHHHHHHHhcC
Q 006004 309 DPSQN--LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTE---------VEQMHKIFKLCG 377 (665)
Q Consensus 309 ~~~~~--~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~---------~e~l~kI~~~~g 377 (665)
..... ......++|+.|+|||++.+...++.++|||||||++|+|++|++||.+..+ ..++..+...+|
T Consensus 163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T cd07867 163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMG 242 (317)
T ss_pred CCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcC
Confidence 43321 1234557899999999998766789999999999999999999999976542 456778888899
Q ss_pred CCChhHHhhhccccc-cC----CCC----CCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 378 SPSEDYWRKSKSAHA-TS----FKP----QQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 378 ~p~~~~~~~~~~~~~-~~----~~~----~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.+..+.|........ .. +.. ...............+..+.+||.+||..||.+|||+.|+|+||||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 243 FPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred CCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 888888876432110 00 000 0000000111112356779999999999999999999999999998
No 89
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.1e-43 Score=377.23 Aligned_cols=284 Identities=25% Similarity=0.328 Sum_probs=217.2
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
.++|++++.||+|+||.||++++..+|..||+|++.... .......+.+|+++|+.++||||+++++++.... .+|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv 81 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-EISIC 81 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC-EEEEE
Confidence 468999999999999999999999999999999997543 3455667899999999999999999999988754 79999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhC-CccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSR-GILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~-gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
|||+.++.+..+......+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++..+....
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 158 (331)
T cd06649 82 MEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--- 158 (331)
T ss_pred eecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccc---
Confidence 99999876665555555799999999999999999999986 69999999999999999999999999998664322
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhc-ccccc-
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSK-SAHAT- 393 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~-~~~~~- 393 (665)
.....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+....+...........+.... .....
T Consensus 159 ~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (331)
T cd06649 159 ANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPG 237 (331)
T ss_pred cccCCCCcCcCCHhHhcC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccccc
Confidence 244578999999999986 568999999999999999999999998877654333221111000000000000 00000
Q ss_pred -----CCCCCCcch-------hhhh-----hhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 394 -----SFKPQQPYK-------RKVL-----ETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 394 -----~~~~~~p~~-------~~~~-----~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
......+.. .... .....+++++++||.+||.+||++|||+.++|+||||+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 238 RPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred ccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence 000000000 0000 0012478899999999999999999999999999999864
No 90
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=8.6e-44 Score=378.67 Aligned_cols=251 Identities=25% Similarity=0.393 Sum_probs=210.8
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcEEEEEEecc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSLYLVFEYME 241 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l~lV~Ey~~ 241 (665)
+.||+|+||.||+|+++.+++.||||+++.... .......+..|+.++..+ +||||+++++++.... .+|+||||+.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~-~~~iv~Ey~~ 79 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPD-RLFFVMEFVN 79 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCC-EEEEEEcCCC
Confidence 369999999999999999999999999975432 233456677899999876 7999999999998765 7999999999
Q ss_pred ccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccccc
Q 006004 242 HDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVV 321 (665)
Q Consensus 242 g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~g 321 (665)
++.+.........+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ......+|
T Consensus 80 ~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-~~~~~~~g 158 (320)
T cd05590 80 GGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-KTTSTFCG 158 (320)
T ss_pred CchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-Cccccccc
Confidence 86665555555679999999999999999999999999999999999999999999999999987643221 22345579
Q ss_pred cccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcc
Q 006004 322 TLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPY 401 (665)
Q Consensus 322 T~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~ 401 (665)
|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.....
T Consensus 159 t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~------------------------ 213 (320)
T cd05590 159 TPDYIAPEILQE-MLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV------------------------ 213 (320)
T ss_pred CccccCHHHHcC-CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCC------------------------
Confidence 999999999876 6789999999999999999999999999888777776643110
Q ss_pred hhhhhhhccCCcHHHHHHHHHhcccCcCCCcCH------HHHHhCcCCCCC
Q 006004 402 KRKVLETFRNFPQSALALVDKLLTIEPENRGSA------ASALRSEFFKTE 446 (665)
Q Consensus 402 ~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa------~eaL~Hp~f~~~ 446 (665)
.....+++++.+||.+||..||.+|+++ .++++||||...
T Consensus 214 -----~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 214 -----VYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred -----CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence 0112478899999999999999999998 999999999864
No 91
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=4.4e-43 Score=377.76 Aligned_cols=285 Identities=31% Similarity=0.529 Sum_probs=231.0
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC-----Cc
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS-----GS 232 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~-----~~ 232 (665)
++|++++.||+|+||.||+|++..+|+.||||++............+.+|+.++++++||||++++++|.... ..
T Consensus 16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 95 (353)
T cd07850 16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQD 95 (353)
T ss_pred cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCc
Confidence 5799999999999999999999999999999998654434455566778999999999999999999886432 25
Q ss_pred EEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC
Q 006004 233 LYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~ 312 (665)
+|+||||+.+++...+.. .+++.++..++.||+.||.|||.+||+||||||+|||++.++.+||+|||++.......
T Consensus 96 ~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~ 172 (353)
T cd07850 96 VYLVMELMDANLCQVIQM---DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 172 (353)
T ss_pred EEEEEeccCCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCC
Confidence 799999999887776543 28999999999999999999999999999999999999999999999999998764332
Q ss_pred CCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc
Q 006004 313 NLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA 392 (665)
Q Consensus 313 ~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~ 392 (665)
......+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+.++...++.+..+++........
T Consensus 173 --~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (353)
T cd07850 173 --MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVR 249 (353)
T ss_pred --CCCCCcccccccCHHHHhC-CCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhh
Confidence 2334568999999999986 6789999999999999999999999999999999999999999998877654321111
Q ss_pred cCCCCC-----Ccchhh---------hhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCC
Q 006004 393 TSFKPQ-----QPYKRK---------VLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPL 448 (665)
Q Consensus 393 ~~~~~~-----~p~~~~---------~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~ 448 (665)
...... .++... ........++.+++||.+||..||.+|||+.++|.||||+.+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~ 319 (353)
T cd07850 250 NYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYD 319 (353)
T ss_pred HHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccC
Confidence 100000 000000 00012235677899999999999999999999999999986533
No 92
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=3e-43 Score=367.65 Aligned_cols=286 Identities=45% Similarity=0.783 Sum_probs=234.8
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-CCcEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-SGSLYL 235 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-~~~l~l 235 (665)
.++|++.+.||.|+||.||+|.+..+++.||+|.++...........+.+|+.++++++||||+++++++... ...+||
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 3579999999999999999999999999999999976544433344567899999999999999999988765 258999
Q ss_pred EEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 236 VFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 236 V~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||||+.+++...+......+++.+++.++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++..+.... ..
T Consensus 84 v~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~~ 162 (293)
T cd07843 84 VMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL-KP 162 (293)
T ss_pred EehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc-cc
Confidence 99999987777666555579999999999999999999999999999999999999999999999999998765432 22
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc-cC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA-TS 394 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~-~~ 394 (665)
.....+++.|+|||.+.+...++.++|+|||||++|+|++|.+||.+.+..+.+.++...++.+....|........ ..
T Consensus 163 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (293)
T cd07843 163 YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKK 242 (293)
T ss_pred cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcc
Confidence 33456789999999987655678999999999999999999999999999999999999999998888875432111 10
Q ss_pred CCCCCcchhhhhhhccC--CcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 395 FKPQQPYKRKVLETFRN--FPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~--~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
..........+...++. +++.+.+||.+||..||++|||+.|+|.||||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 243 KTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred cccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 00001111112233333 48899999999999999999999999999998
No 93
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=9e-43 Score=361.22 Aligned_cols=283 Identities=35% Similarity=0.627 Sum_probs=226.7
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++++.||+|+||.||+|++..+|+.||+|++..........+.+.+|+.++++++||||+++++++.... .+|+||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKR-KLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCC-EEEEEE
Confidence 4699999999999999999999999999999998754333333455788999999999999999999988754 789999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
||++++++..+......+++.+++.++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++..+..... ...
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~ 158 (286)
T cd07847 80 EYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD-DYT 158 (286)
T ss_pred eccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc-ccc
Confidence 9999988887766666799999999999999999999999999999999999999999999999999987654321 223
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChh---HHhhhccccccC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSED---YWRKSKSAHATS 394 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~---~~~~~~~~~~~~ 394 (665)
...++..|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+....+..... .|..........
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07847 159 DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS 238 (286)
T ss_pred CcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccccc
Confidence 45678999999998765678899999999999999999999999998888777776655543321 111100000000
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
... ..........+..++..+.+||.+||..||++|||+.++|.||||
T Consensus 239 ~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 239 IPE-PETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred CCC-cccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 000 000111223345789999999999999999999999999999998
No 94
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=6.3e-43 Score=364.48 Aligned_cols=284 Identities=37% Similarity=0.712 Sum_probs=229.3
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
.++|++.+.||+|+||.||+|.++.+++.||||.+...... .....+.+|++++++++|+||+++++++.... ..|+|
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~~lv 81 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIHTKK-TLTLV 81 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEecCC-eEEEE
Confidence 35799999999999999999999999999999998754322 12234568999999999999999999988754 79999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|||+.+++...+......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........ ..
T Consensus 82 ~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-~~ 160 (291)
T cd07844 82 FEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK-TY 160 (291)
T ss_pred EecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCc-cc
Confidence 99999988777666555789999999999999999999999999999999999999999999999999876432211 12
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCC-hHHHHHHHHHhcCCCChhHHhhhccccccC-
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRT-EVEQMHKIFKLCGSPSEDYWRKSKSAHATS- 394 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~-~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~- 394 (665)
....++..|+|||++.+...++.++||||+||++|+|++|++||.+.+ ..+++..+.+..+.+..+.|..........
T Consensus 161 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (291)
T cd07844 161 SNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKP 240 (291)
T ss_pred cccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccc
Confidence 233568899999998765668899999999999999999999998776 677888888999998888886543221110
Q ss_pred CCCCCcchhhhhhhccCCc--HHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 395 FKPQQPYKRKVLETFRNFP--QSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s--~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
..........+......++ .++.+||.+||..||.+|||+.++|+||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 241 YSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred ccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 0000000111223333455 889999999999999999999999999998
No 95
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=6e-43 Score=362.59 Aligned_cols=280 Identities=39% Similarity=0.778 Sum_probs=233.0
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+|++++.||.|++|.||+|++..+|+.||||+++..... .....+.+|+.++++++||||+++++++.... .+|||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE-GTPSTAIREISLMKELKHENIVRLHDVIHTEN-KLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc-cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCC-cEEEEEe
Confidence 489999999999999999999999999999999765432 23445678999999999999999999998764 7899999
Q ss_pred eccccchhhhcCCC--CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 239 YMEHDLAGLATTPG--IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 239 y~~g~ll~~~~~~~--~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|+.+++...+.... ..+++.++..++.||+.||.|||+.||+|+||||+||++++++.++|+|||++........ ..
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~-~~ 157 (284)
T cd07836 79 YMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN-TF 157 (284)
T ss_pred cCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-cc
Confidence 99998777665433 4689999999999999999999999999999999999999999999999999986543222 12
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFK 396 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~ 396 (665)
....+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+.++......+....|........ +.
T Consensus 158 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 235 (284)
T cd07836 158 SNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPE--YK 235 (284)
T ss_pred ccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCch--hc
Confidence 3346789999999987756678999999999999999999999999999999999999999998888876542211 11
Q ss_pred CCCcc--hhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 397 PQQPY--KRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 397 ~~~p~--~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
...+. ..........+++.+.++|.+||+.||.+|||+.++|+||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 236 PTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred ccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 11111 112233345678999999999999999999999999999998
No 96
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=4.7e-43 Score=367.00 Aligned_cols=288 Identities=48% Similarity=0.876 Sum_probs=238.0
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC-----
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS----- 230 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~----- 230 (665)
..++|++.+.||+|+||.||+|.++.+|+.||+|+++...........+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 346899999999999999999999999999999999765433333445678999999999999999999886533
Q ss_pred ----CcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccce
Q 006004 231 ----GSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLAT 306 (665)
Q Consensus 231 ----~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~ 306 (665)
+.+|+||||++++++..+......+++.+++.++.||+.||.|||+.||+|+||||+|||+++++.+||+|||++.
T Consensus 85 ~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~ 164 (302)
T cd07864 85 KKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLAR 164 (302)
T ss_pred cccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccc
Confidence 3689999999998887777655579999999999999999999999999999999999999999999999999998
Q ss_pred ecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhh
Q 006004 307 TYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRK 386 (665)
Q Consensus 307 ~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~ 386 (665)
.+............++..|+|||++.+...++.++|||||||++|+|++|++||...+..+.+..+...++.+....|+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (302)
T cd07864 165 LYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPD 244 (302)
T ss_pred cccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccc
Confidence 76544333333445688899999887655678999999999999999999999999999999999999999888877764
Q ss_pred hccccc-cCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 387 SKSAHA-TSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 387 ~~~~~~-~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
...... ..........+.+...+..++..+.+||.+||..||.+|||+.++|.||||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 245 VIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred ccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 322111 111111222233444556789999999999999999999999999999997
No 97
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.6e-43 Score=383.32 Aligned_cols=264 Identities=27% Similarity=0.378 Sum_probs=216.4
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~l 235 (665)
.++|++++.||+|+||.||+|++..+++.||+|++..... .......+.+|+.+++.++||||+++++++.... .+|+
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~-~~~l 120 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR-YLYM 120 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC-EEEE
Confidence 4689999999999999999999999999999999975332 2334456788999999999999999999998754 7999
Q ss_pred EEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 236 VFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 236 V~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||||+.++.+..+.... .+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++..+.......
T Consensus 121 v~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~ 199 (371)
T cd05622 121 VMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 199 (371)
T ss_pred EEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCccc
Confidence 99999876555444433 58999999999999999999999999999999999999999999999999998765433323
Q ss_pred cccccccccccCcccccCC---cccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc
Q 006004 316 LTSRVVTLWYRAPELLLGA---TKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA 392 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~---~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~ 392 (665)
....+||+.|+|||++.+. ..++.++|||||||+||+|++|.+||.+.+......+|.......
T Consensus 200 ~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~------------- 266 (371)
T cd05622 200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL------------- 266 (371)
T ss_pred ccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcc-------------
Confidence 3456899999999998753 247899999999999999999999999988877777665421100
Q ss_pred cCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCC--CcCHHHHHhCcCCCCCC
Q 006004 393 TSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPEN--RGSAASALRSEFFKTEP 447 (665)
Q Consensus 393 ~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~--RpTa~eaL~Hp~f~~~~ 447 (665)
. ......++..+++||..||..++.+ |+++.++++|+||+...
T Consensus 267 -~-----------~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~~ 311 (371)
T cd05622 267 -T-----------FPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQ 311 (371)
T ss_pred -c-----------CCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCCC
Confidence 0 0112368999999999999844433 78999999999998743
No 98
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.9e-43 Score=375.68 Aligned_cols=251 Identities=24% Similarity=0.390 Sum_probs=210.9
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcEEEEEEecc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSLYLVFEYME 241 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l~lV~Ey~~ 241 (665)
+.||+|+||.||+|++..+++.||||+++.... .......+..|+.++..+ +||||+++++++.... .+||||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~-~~~lv~E~~~ 79 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKD-RLFFVMEYVN 79 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC-eEEEEEeCCC
Confidence 369999999999999999999999999976432 234455677899999876 8999999999998765 7999999999
Q ss_pred ccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccccc
Q 006004 242 HDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVV 321 (665)
Q Consensus 242 g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~g 321 (665)
++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ......+|
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~g 158 (321)
T cd05591 80 GGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-VTTTTFCG 158 (321)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCC-cccccccc
Confidence 86665555455579999999999999999999999999999999999999999999999999998643222 22345579
Q ss_pred cccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcc
Q 006004 322 TLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPY 401 (665)
Q Consensus 322 T~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~ 401 (665)
|+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+....-
T Consensus 159 t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~------------------------ 213 (321)
T cd05591 159 TPDYIAPEILQE-LEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDV------------------------ 213 (321)
T ss_pred CccccCHHHHcC-CCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC------------------------
Confidence 999999999876 6789999999999999999999999999988877777644110
Q ss_pred hhhhhhhccCCcHHHHHHHHHhcccCcCCCc-------CHHHHHhCcCCCCC
Q 006004 402 KRKVLETFRNFPQSALALVDKLLTIEPENRG-------SAASALRSEFFKTE 446 (665)
Q Consensus 402 ~~~~~~~~~~~s~~a~dLI~~lL~~DP~~Rp-------Ta~eaL~Hp~f~~~ 446 (665)
.....++.++.+||.+||.+||.+|+ ++.++++||||...
T Consensus 214 -----~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~ 260 (321)
T cd05591 214 -----LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI 260 (321)
T ss_pred -----CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence 01124688999999999999999999 99999999999753
No 99
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-45 Score=418.02 Aligned_cols=277 Identities=27% Similarity=0.394 Sum_probs=238.4
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEE
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~ 234 (665)
..++|++++.||+|+||.|.+++++.+++.||+|++.+-.+ .......|+.|..||...+.+.|+.|+..|++.. ++|
T Consensus 73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~-~LY 151 (1317)
T KOG0612|consen 73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER-YLY 151 (1317)
T ss_pred CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc-ceE
Confidence 45789999999999999999999999999999999976433 3445567899999999999999999999999976 899
Q ss_pred EEEEeccc-cchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC
Q 006004 235 LVFEYMEH-DLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 235 lV~Ey~~g-~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~ 313 (665)
+|||||.| |++.++..-+ +++|..+++|+..|+.||+-||+.|+|||||||+|||||..|++||+|||.+..++.+..
T Consensus 152 lVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~ 230 (1317)
T KOG0612|consen 152 LVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGT 230 (1317)
T ss_pred EEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCc
Confidence 99999986 6777777666 899999999999999999999999999999999999999999999999999999987777
Q ss_pred CCcccccccccccCcccccC----CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcc
Q 006004 314 LPLTSRVVTLWYRAPELLLG----ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKS 389 (665)
Q Consensus 314 ~~~~~~~gT~~Y~APE~l~~----~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~ 389 (665)
......+|||.|++||++.. .+.|+..+|+|||||++||||.|..||...+-.+++-+|...-.
T Consensus 231 V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~------------ 298 (1317)
T KOG0612|consen 231 VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKE------------ 298 (1317)
T ss_pred EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhh------------
Confidence 77777899999999999862 25799999999999999999999999999999999999976310
Q ss_pred ccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC---HHHHHhCcCCCCCCCCCCCCCCCCCCC
Q 006004 390 AHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS---AASALRSEFFKTEPLPCDPSNLPKYPP 460 (665)
Q Consensus 390 ~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT---a~eaL~Hp~f~~~~~~~~p~~~p~~~~ 460 (665)
.-.|+ ....+|..+++||+++|. +|+.|.. +.++.+||||.+..|..-....|++.|
T Consensus 299 --~l~FP-----------~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~iR~~~pP~vP 358 (1317)
T KOG0612|consen 299 --SLSFP-----------DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDNIRESVPPVVP 358 (1317)
T ss_pred --hcCCC-----------cccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhhhhhcCCCCCC
Confidence 00111 012599999999999995 7888988 999999999999887544444455444
No 100
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=7.4e-43 Score=361.14 Aligned_cols=284 Identities=58% Similarity=1.014 Sum_probs=239.6
Q ss_pred eeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-CCcEEEEEE
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-SGSLYLVFE 238 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-~~~l~lV~E 238 (665)
|++++.||.|+||.||+|++..+++.||+|.+............+.+|+.+++.++|+||+++++++... .+.+|+|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 7889999999999999999999999999999986543344456678999999999999999999998876 258999999
Q ss_pred eccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccc
Q 006004 239 YMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTS 318 (665)
Q Consensus 239 y~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~ 318 (665)
|+.+++...+......+++.+++.++.||+.||.|||+.|++|+||||+|||+++++.+||+|||++...........+.
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 160 (287)
T cd07840 81 YMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTN 160 (287)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccc
Confidence 99998887777665689999999999999999999999999999999999999999999999999998775543323344
Q ss_pred ccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccc-cccCCCC
Q 006004 319 RVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSA-HATSFKP 397 (665)
Q Consensus 319 ~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~-~~~~~~~ 397 (665)
..++..|+|||.+.+...++.++|||||||++|+|++|++||...+..+.+..+...++.+....|...... ....+.+
T Consensus 161 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (287)
T cd07840 161 RVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKP 240 (287)
T ss_pred cccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccc
Confidence 567889999998876567899999999999999999999999999999999999999998888777654322 1122222
Q ss_pred CCcchhhhhhhccCC-cHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 398 QQPYKRKVLETFRNF-PQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 398 ~~p~~~~~~~~~~~~-s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
..+....+...+... ++.+.+||.+||..||.+|||+.+++.||||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 241 KKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred cccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 333333444445554 9999999999999999999999999999998
No 101
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=3.7e-43 Score=373.85 Aligned_cols=256 Identities=25% Similarity=0.391 Sum_probs=214.1
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l~lV 236 (665)
+|++++.||+|+||.||+|++..+++.||||+++.... .......+..|+.++..+ .|++|+++++++...+ .+|||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~-~~~lv 79 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMD-RLYFV 79 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCC-EEEEE
Confidence 48999999999999999999999999999999975432 233445567788888887 5899999999988755 79999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|||+.++.+.........+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ...
T Consensus 80 ~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~-~~~ 158 (323)
T cd05616 80 MEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG-VTT 158 (323)
T ss_pred EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC-Ccc
Confidence 9999876555444445579999999999999999999999999999999999999999999999999997643221 123
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFK 396 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~ 396 (665)
...+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.....
T Consensus 159 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~------------------- 218 (323)
T cd05616 159 KTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV------------------- 218 (323)
T ss_pred ccCCCChhhcCHHHhcC-CCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-------------------
Confidence 45679999999999986 6789999999999999999999999999888777766654210
Q ss_pred CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC-----HHHHHhCcCCCCC
Q 006004 397 PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS-----AASALRSEFFKTE 446 (665)
Q Consensus 397 ~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT-----a~eaL~Hp~f~~~ 446 (665)
.....++.++.+||.+||.+||.+|++ ..++++||||...
T Consensus 219 ----------~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~ 263 (323)
T cd05616 219 ----------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 263 (323)
T ss_pred ----------CCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence 011357889999999999999999998 4899999999864
No 102
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=8.7e-43 Score=365.52 Aligned_cols=287 Identities=47% Similarity=0.744 Sum_probs=229.2
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC------
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS------ 230 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~------ 230 (665)
.++|++++.||+|+||.||+|++..+++.||||++............+.+|+.++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 34799999999999999999999999999999998754333233344568999999999999999999876532
Q ss_pred -CcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecC
Q 006004 231 -GSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYD 309 (665)
Q Consensus 231 -~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~ 309 (665)
...|+||||+.+++...+......+++.+++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++..+.
T Consensus 91 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 170 (310)
T cd07865 91 KGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFS 170 (310)
T ss_pred CceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCccccc
Confidence 3469999999998888777666679999999999999999999999999999999999999999999999999998764
Q ss_pred CCCC---CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhh
Q 006004 310 PSQN---LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRK 386 (665)
Q Consensus 310 ~~~~---~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~ 386 (665)
.... .......++..|+|||++.+...++.++|||||||++|+|++|++||.+.+.......+...+|..+.+.|+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (310)
T cd07865 171 LSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPG 250 (310)
T ss_pred CCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence 3322 1223456789999999987755678999999999999999999999999998888888889898888776654
Q ss_pred hccccccC-CCCCCcchhhhhhh--ccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 387 SKSAHATS-FKPQQPYKRKVLET--FRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 387 ~~~~~~~~-~~~~~p~~~~~~~~--~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
........ .............. ....++.+.+||.+||..||.+|||++++|+||||
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 251 VDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred ccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 32111100 00000000011111 11246788999999999999999999999999998
No 103
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.9e-44 Score=386.98 Aligned_cols=258 Identities=29% Similarity=0.481 Sum_probs=231.7
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
.+.|+.++.+|+|+||.+++++++.+++.||+|+|+.........+....|+.+++++.|||||.+.+.|...+..++||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 35799999999999999999999999999999999998877666667889999999999999999999999877569999
Q ss_pred EEeccccchh-hhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC
Q 006004 237 FEYMEHDLAG-LATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL 314 (665)
Q Consensus 237 ~Ey~~g~ll~-~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~ 314 (665)
|+||+|+.+. .+.. ++..|+|+.+..|+.||+.||.|||++.|+|||||+.|||++.++.|||+|||+|+.+.+.. .
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~-~ 161 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED-S 161 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch-h
Confidence 9999986554 3433 34679999999999999999999999999999999999999999999999999999987654 2
Q ss_pred CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccC
Q 006004 315 PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATS 394 (665)
Q Consensus 315 ~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~ 394 (665)
...+.+||+.||+||++.+ .+|+.++|||||||++|||++-+++|.+.+....+.+|.+.+..|-+
T Consensus 162 ~a~tvvGTp~YmcPEil~d-~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp------------- 227 (426)
T KOG0589|consen 162 LASTVVGTPYYMCPEILSD-IPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLP------------- 227 (426)
T ss_pred hhheecCCCcccCHHHhCC-CCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCC-------------
Confidence 4567899999999999987 78999999999999999999999999999999999999886544422
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCC
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFK 444 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~ 444 (665)
..++.+++.||+.||..+|..||+|.++|.+|...
T Consensus 228 ---------------~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~ 262 (426)
T KOG0589|consen 228 ---------------SMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL 262 (426)
T ss_pred ---------------ccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence 35788999999999999999999999999997765
No 104
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3.9e-43 Score=375.30 Aligned_cols=264 Identities=22% Similarity=0.349 Sum_probs=215.0
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
++|++++.||+|+||.||+++++.+++.||+|++..... .......+.+|+.++..++|+||+++++++.+.. .+|+|
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~lv 79 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDEN-NLYLV 79 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC-EEEEE
Confidence 379999999999999999999999999999999864322 2333455788999999999999999999998765 79999
Q ss_pred EEecccc-chhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 237 FEYMEHD-LAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 237 ~Ey~~g~-ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
|||+.++ |...+......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+.......
T Consensus 80 ~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~ 159 (332)
T cd05623 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 159 (332)
T ss_pred EeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcce
Confidence 9999865 444554445579999999999999999999999999999999999999999999999999998654333322
Q ss_pred cccccccccccCcccccC----CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 316 LTSRVVTLWYRAPELLLG----ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~----~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
....+||+.|+|||++.. ...++.++|||||||+||+|++|+.||.+.+..+.+.++.......
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~------------ 227 (332)
T cd05623 160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF------------ 227 (332)
T ss_pred ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccc------------
Confidence 334579999999999862 3468899999999999999999999999988777777664321000
Q ss_pred ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCC--CcCHHHHHhCcCCCCC
Q 006004 392 ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPEN--RGSAASALRSEFFKTE 446 (665)
Q Consensus 392 ~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~--RpTa~eaL~Hp~f~~~ 446 (665)
........+++++++||.+||..++.+ |+++.++++||||...
T Consensus 228 ------------~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 228 ------------QFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred ------------cCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 001112357899999999999765554 6899999999999864
No 105
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.7e-43 Score=374.10 Aligned_cols=252 Identities=29% Similarity=0.470 Sum_probs=209.7
Q ss_pred EEEeeccCceEEEEEEEC---CCCcEEEEEEEecCCC--CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 163 IDKIGQGTYSSVYKARDL---ETGKIVALKKVRFANM--DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 163 ~~~LG~G~fg~Vy~a~~~---~~g~~vAiK~i~~~~~--~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++.||+|+||.||+|++. .+++.||||+++.... .......+.+|+.+|+.++||||++++++|.... .+|+||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~-~~~lv~ 79 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGG-KLYLIL 79 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCC-eEEEEE
Confidence 368999999999999864 5788999999975432 2233455778999999999999999999998754 799999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
||+.++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ....
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~ 158 (323)
T cd05584 80 EYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG-TVTH 158 (323)
T ss_pred eCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC-Cccc
Confidence 999986665555555678999999999999999999999999999999999999999999999999987543222 1233
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKP 397 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~ 397 (665)
..+||+.|+|||++.+ ..++.++|||||||+||+|++|++||.+.+....+..+....
T Consensus 159 ~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~--------------------- 216 (323)
T cd05584 159 TFCGTIEYMAPEILMR-SGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGK--------------------- 216 (323)
T ss_pred ccCCCccccChhhccC-CCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC---------------------
Confidence 4578999999999876 567899999999999999999999999988776666654311
Q ss_pred CCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCc-----CHHHHHhCcCCCCC
Q 006004 398 QQPYKRKVLETFRNFPQSALALVDKLLTIEPENRG-----SAASALRSEFFKTE 446 (665)
Q Consensus 398 ~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~Rp-----Ta~eaL~Hp~f~~~ 446 (665)
......+++.+.+||.+||.+||++|+ ++.++++||||...
T Consensus 217 --------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 217 --------LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred --------CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 011235788999999999999999999 89999999999864
No 106
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=4e-43 Score=365.62 Aligned_cols=254 Identities=26% Similarity=0.371 Sum_probs=205.4
Q ss_pred eeccCceEEEEEEECCCCcEEEEEEEecCCCC-HHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEeccccc
Q 006004 166 IGQGTYSSVYKARDLETGKIVALKKVRFANMD-PESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEHDL 244 (665)
Q Consensus 166 LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~-~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g~l 244 (665)
||+|+||+||++.+..+++.||+|++...... ......+..|+.+++.++||||+++.+++.... .+|+||||+.++.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKT-DLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCC-eEEEEEeCCCCCC
Confidence 79999999999999999999999999754332 223456778999999999999999999888754 7999999999765
Q ss_pred hhhhc----CCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccccc
Q 006004 245 AGLAT----TPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRV 320 (665)
Q Consensus 245 l~~~~----~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~ 320 (665)
+.... .....+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+..... ......
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~ 158 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTKGYA 158 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-cccccC
Confidence 54332 2345699999999999999999999999999999999999999999999999999987644322 233457
Q ss_pred ccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCc
Q 006004 321 VTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQP 400 (665)
Q Consensus 321 gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p 400 (665)
||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...........+.......
T Consensus 159 g~~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--------------------- 216 (280)
T cd05608 159 GTPGFMAPELLQG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND--------------------- 216 (280)
T ss_pred CCcCccCHHHhcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc---------------------
Confidence 8999999999986 578999999999999999999999998765432222221110000
Q ss_pred chhhhhhhccCCcHHHHHHHHHhcccCcCCCc-----CHHHHHhCcCCCCCC
Q 006004 401 YKRKVLETFRNFPQSALALVDKLLTIEPENRG-----SAASALRSEFFKTEP 447 (665)
Q Consensus 401 ~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~Rp-----Ta~eaL~Hp~f~~~~ 447 (665)
.......+++.+.+||.+||+.||++|+ |++++++||||+...
T Consensus 217 ----~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~ 264 (280)
T cd05608 217 ----SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLN 264 (280)
T ss_pred ----CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCC
Confidence 0011235889999999999999999999 899999999998753
No 107
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.6e-43 Score=373.28 Aligned_cols=251 Identities=26% Similarity=0.427 Sum_probs=207.4
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcEEEEEEecc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSLYLVFEYME 241 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l~lV~Ey~~ 241 (665)
+.||+|+||.||+|++..+++.||||+++.... .......+..|..++..+ +||||+++++++.... .+|+||||+.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~-~~~lv~e~~~ 79 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKE-HLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCC-EEEEEEcCCC
Confidence 369999999999999999999999999975432 223344556677777754 8999999999988755 7999999998
Q ss_pred ccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccccc
Q 006004 242 HDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVV 321 (665)
Q Consensus 242 g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~g 321 (665)
|+.+..+......+++.++..|+.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ......+|
T Consensus 80 gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~~~~~g 158 (316)
T cd05592 80 GGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKASTFCG 158 (316)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-CccccccC
Confidence 87665555555679999999999999999999999999999999999999999999999999998653322 22345579
Q ss_pred cccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcc
Q 006004 322 TLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPY 401 (665)
Q Consensus 322 T~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~ 401 (665)
|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+.... +
T Consensus 159 t~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~--~---------------------- 213 (316)
T cd05592 159 TPDYIAPEILKG-QKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDR--P---------------------- 213 (316)
T ss_pred CccccCHHHHcC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--C----------------------
Confidence 999999999986 568999999999999999999999999988776666653210 0
Q ss_pred hhhhhhhccCCcHHHHHHHHHhcccCcCCCcCH-HHHHhCcCCCCC
Q 006004 402 KRKVLETFRNFPQSALALVDKLLTIEPENRGSA-ASALRSEFFKTE 446 (665)
Q Consensus 402 ~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa-~eaL~Hp~f~~~ 446 (665)
.....++.++.+||.+||..||.+|+++ .++++||||...
T Consensus 214 -----~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 214 -----HFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred -----CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence 0113478899999999999999999986 588899999863
No 108
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1e-42 Score=363.15 Aligned_cols=285 Identities=41% Similarity=0.738 Sum_probs=229.5
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCC-CCCcceeeeeeeccCC----c
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLD-HPNVMKLEGLVTSRSG----S 232 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~----~ 232 (665)
++|++.+.||+|+||.||+|++..+++.||||+++...........+.+|+.+++.+. ||||+++++++..... .
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 3699999999999999999999999999999998765433333456778999999995 6999999998876542 3
Q ss_pred EEEEEEeccccchhhhcCC----CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcC-CCcEEEEeccccee
Q 006004 233 LYLVFEYMEHDLAGLATTP----GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINN-AGVLKIGDFGLATT 307 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~~----~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~-~g~lKL~DFGlA~~ 307 (665)
+|+||||+.+++...+... ...+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++..
T Consensus 81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence 7999999999877765542 245899999999999999999999999999999999999998 89999999999986
Q ss_pred cCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhh
Q 006004 308 YDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKS 387 (665)
Q Consensus 308 ~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~ 387 (665)
+..... ......+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.++.+.+.+++...+.+....|...
T Consensus 161 ~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T cd07837 161 FSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGV 239 (295)
T ss_pred cCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcch
Confidence 643221 2233467899999999876566899999999999999999999999999999999999888888877766432
Q ss_pred ccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCC
Q 006004 388 KSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFK 444 (665)
Q Consensus 388 ~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~ 444 (665)
.........+... ...+....+.+++.+.+||.+||.+||.+|||+.++|.||||+
T Consensus 240 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 240 SKLRDWHEFPQWK-PQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred hhccchhhcCccc-chhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 2111110001100 0112233456899999999999999999999999999999995
No 109
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=9.9e-43 Score=363.91 Aligned_cols=286 Identities=41% Similarity=0.757 Sum_probs=232.9
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++.+.||+|++|.||+|.+..+|+.||||+++...........+.+|++++++++||||+++++++.... .+|+||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK-RLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCC-eEEEEE
Confidence 4799999999999999999999999999999998765443344456788999999999999999999998755 799999
Q ss_pred EeccccchhhhcCCC-CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcC-CCcEEEEecccceecCCCCCCC
Q 006004 238 EYMEHDLAGLATTPG-IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINN-AGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~-~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~-~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||+++++...+.... ..+++..++.++.||+.||.|||++||+|+||+|+|||++. ++.+||+|||++....... ..
T Consensus 81 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~-~~ 159 (294)
T PLN00009 81 EYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV-RT 159 (294)
T ss_pred ecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc-cc
Confidence 999988777665433 34688899999999999999999999999999999999985 5579999999997654321 12
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc-cC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA-TS 394 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~-~~ 394 (665)
.....+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+.+++...+.+....|........ ..
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (294)
T PLN00009 160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKS 239 (294)
T ss_pred cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhh
Confidence 23456789999999987656688999999999999999999999999999999999999999998888864321111 00
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
..+..+ ........+.+++.+.+||.+||+.||++||++.++|.||||.+.
T Consensus 240 ~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~ 290 (294)
T PLN00009 240 AFPKWP-PKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL 290 (294)
T ss_pred hcccCC-CCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence 001000 011222345688999999999999999999999999999999864
No 110
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-44 Score=377.07 Aligned_cols=333 Identities=23% Similarity=0.314 Sum_probs=269.2
Q ss_pred cCCCcccccccccccCCCCCCcceeeeeccCCCcccceeecCCCCCCcccccc---------CCc------cccccccc-
Q 006004 84 ERPKRNRHQRCATMDMGMGTGTETTIVAVGLQPQMSRIVCLPVGPEGDEVVAG---------WPS------WLTSVAGE- 147 (665)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~p~~~r~~~~p~~~~g~~~~~~---------~p~------~~~~~~g~- 147 (665)
||++||++|++++|+++.....++..+..-+.......+++|+.+...+-... .+. ........
T Consensus 257 DrTsRNDFMGslSFgisEl~K~p~~GWyKlLsqeEGEyyNvp~~~~~~e~~~~lr~k~~~~~~~~~~s~p~~~~~~~~~~ 336 (683)
T KOG0696|consen 257 DRTSRNDFMGSLSFGISELQKAPVDGWYKLLSQEEGEYYNVPVPDEDSEDNEELRQKFERARIGPGSSKPEKKTMPTDSK 336 (683)
T ss_pred cccccccccceecccHHHHhhcchhhHHHHhhhhcCceeccCCCCchhhHHHHHHHHHhhcccCCCcCCCCCCCCCCccc
Confidence 89999999999999999988888888888888888888888887665332110 000 00000000
Q ss_pred --cccCCccCCCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhC-CCCCcceee
Q 006004 148 --AIKGWQPRRADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKL-DHPNVMKLE 223 (665)
Q Consensus 148 --~~~~~~~~~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L-~HpnIV~l~ 223 (665)
........+..+|..+..||+|+||.|.++..+.+.+.||||++++..+ ..+.++.-+.|-.+|... +-|.+++|+
T Consensus 337 ~~~~~~~d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlH 416 (683)
T KOG0696|consen 337 FHNSSKRDRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLH 416 (683)
T ss_pred CCCCCcccceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHH
Confidence 0000112345679999999999999999999999999999999987643 334455556788888776 678999999
Q ss_pred eeeeccCCcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecc
Q 006004 224 GLVTSRSGSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFG 303 (665)
Q Consensus 224 ~~~~~~~~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFG 303 (665)
.+|+.-+ .+|+||||+.|+.+.+.+++-++|.|+.+..|+.+|+-||-+||++|||+||||.+|||||.+|++||+|||
T Consensus 417 ScFQTmD-RLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFG 495 (683)
T KOG0696|consen 417 SCFQTMD-RLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFG 495 (683)
T ss_pred HHhhhhh-heeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecc
Confidence 9999865 899999999987666666666689999999999999999999999999999999999999999999999999
Q ss_pred cceecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhH
Q 006004 304 LATTYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDY 383 (665)
Q Consensus 304 lA~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~ 383 (665)
++..--. ......+++|||.|+|||++. ..+|+.++|+||+||+|||||.|++||.|.++.+....|......
T Consensus 496 mcKEni~-~~~TTkTFCGTPdYiAPEIi~-YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvs----- 568 (683)
T KOG0696|consen 496 MCKENIF-DGVTTKTFCGTPDYIAPEIIA-YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVS----- 568 (683)
T ss_pred ccccccc-CCcceeeecCCCcccccceEE-ecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCc-----
Confidence 9975322 223456789999999999887 478999999999999999999999999999999999998763221
Q ss_pred HhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC-----HHHHHhCcCCCCCCC
Q 006004 384 WRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS-----AASALRSEFFKTEPL 448 (665)
Q Consensus 384 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT-----a~eaL~Hp~f~~~~~ 448 (665)
.++.+|.++.++++.+|.+.|.+|.. -.++-.||||+...+
T Consensus 569 ------------------------yPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDW 614 (683)
T KOG0696|consen 569 ------------------------YPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDW 614 (683)
T ss_pred ------------------------CcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccH
Confidence 23578999999999999999999965 367889999986543
No 111
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.2e-42 Score=360.58 Aligned_cols=284 Identities=35% Similarity=0.646 Sum_probs=229.4
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++++.||+|+||.||+|.+..+++.||+|.+..........+.+.+|+++++.++||||+++++++.... .+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKK-RLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCC-eEEEEE
Confidence 3699999999999999999999999999999998654433334556788999999999999999999997654 799999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
||+.++++..+......+++.+++.++.||+.||.|||+.||+|+||+|+||++++++.++|+|||++..+.... ....
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~-~~~~ 158 (286)
T cd07846 80 EFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-EVYT 158 (286)
T ss_pred ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-cccC
Confidence 999998877666555569999999999999999999999999999999999999999999999999998764432 2234
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcc-c-cccCC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKS-A-HATSF 395 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~-~-~~~~~ 395 (665)
...++.+|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+....+............ . .....
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07846 159 DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMR 238 (286)
T ss_pred cccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccc
Confidence 457899999999987656678899999999999999999999999888888888877666543322111000 0 00011
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.+...........++.++..+.+||.+||..||.+|||+.++|+||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 239 LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 111122222333456789999999999999999999999999999998
No 112
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.8e-42 Score=359.32 Aligned_cols=283 Identities=35% Similarity=0.642 Sum_probs=233.5
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+|++.+.||+|+||.||+|.+..+++.||+|+++...........+.+|++++++++|+||+++++++...+ .+|+|||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~iv~e 80 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKG-RLYLVFE 80 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECC-EEEEEEe
Confidence 699999999999999999999999999999998765444455567889999999999999999999998754 7999999
Q ss_pred eccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccc
Q 006004 239 YMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTS 318 (665)
Q Consensus 239 y~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~ 318 (665)
|+.++++..+......+++.++..++.||+.||.|||..||+|+||+|+||+++.++.+||+|||++.............
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (288)
T cd07833 81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTD 160 (288)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccC
Confidence 99998887776666679999999999999999999999999999999999999999999999999998876544334455
Q ss_pred ccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccccc---CC
Q 006004 319 RVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHAT---SF 395 (665)
Q Consensus 319 ~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~---~~ 395 (665)
..++.+|+|||++.+...++.++|+|||||++|+|++|++||.+.+..+.+..+...++......+......... .+
T Consensus 161 ~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (288)
T cd07833 161 YVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAF 240 (288)
T ss_pred cccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccccc
Confidence 678999999999987547899999999999999999999999999888888888887777766554332211000 00
Q ss_pred CCCCcchhhhhhhc-cCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 396 KPQQPYKRKVLETF-RNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 396 ~~~~p~~~~~~~~~-~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.... ....+...+ ..++..+++||.+||..||++|||+.++++||||
T Consensus 241 ~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 241 PEPS-QPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred CCCC-CcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 0000 001111122 2358999999999999999999999999999998
No 113
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=8.8e-43 Score=363.97 Aligned_cols=259 Identities=26% Similarity=0.406 Sum_probs=212.4
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCC-HHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMD-PESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~-~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
.|++.+.||+|+||.||++.+..+++.||||++...... ......+.+|+.+++.++||||+++++++...+ .+|+||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD-ALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCC-eEEEEE
Confidence 489999999999999999999999999999999754332 223345678999999999999999999988765 799999
Q ss_pred Eeccccchh-hhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 238 EYMEHDLAG-LATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 238 Ey~~g~ll~-~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||+.++.+. .+.. ....+++..+..++.||+.||.|||+.||+||||||+|||+++++.++|+|||++....... .
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~--~ 157 (285)
T cd05605 80 TLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE--T 157 (285)
T ss_pred eccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC--c
Confidence 999876554 3322 23469999999999999999999999999999999999999999999999999998764322 2
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
....+|++.|+|||++.+ ..++.++||||+||++|+|++|..||.+.+.......+........
T Consensus 158 ~~~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--------------- 221 (285)
T cd05605 158 IRGRVGTVGYMAPEVVKN-ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQ--------------- 221 (285)
T ss_pred cccccCCCCccCcHHhcC-CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcc---------------
Confidence 234578999999999976 5689999999999999999999999998766544444322110000
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCc-----CHHHHHhCcCCCCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRG-----SAASALRSEFFKTE 446 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~Rp-----Ta~eaL~Hp~f~~~ 446 (665)
......++..+.+||.+||..||.+|+ ++.++++||||...
T Consensus 222 ----------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 222 ----------EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred ----------cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence 011235788999999999999999999 99999999999864
No 114
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=4.1e-43 Score=373.49 Aligned_cols=251 Identities=25% Similarity=0.392 Sum_probs=207.5
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHH-HHHhCCCCCcceeeeeeeccCCcEEEEEEecc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIH-ILRKLDHPNVMKLEGLVTSRSGSLYLVFEYME 241 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~-iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~ 241 (665)
+.||+|+||+||+|++..+|+.||||++..... .......+..|+. +++.++||||+++++++.... .+|+||||+.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~-~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTAD-KLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCC-EEEEEEcCCC
Confidence 369999999999999999999999999975432 2223344555555 567899999999999988755 7999999999
Q ss_pred ccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccccc
Q 006004 242 HDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVV 321 (665)
Q Consensus 242 g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~g 321 (665)
++.+..+......+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++...... .......+|
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~g 158 (323)
T cd05575 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH-SKTTSTFCG 158 (323)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC-CCccccccC
Confidence 8766655555668999999999999999999999999999999999999999999999999998754222 122345579
Q ss_pred cccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcc
Q 006004 322 TLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPY 401 (665)
Q Consensus 322 T~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~ 401 (665)
|+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+....
T Consensus 159 t~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~------------------------- 212 (323)
T cd05575 159 TPEYLAPEVLRK-QPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKP------------------------- 212 (323)
T ss_pred ChhhcChhhhcC-CCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC-------------------------
Confidence 999999999876 678999999999999999999999999988776666654310
Q ss_pred hhhhhhhccCCcHHHHHHHHHhcccCcCCCcCH----HHHHhCcCCCCC
Q 006004 402 KRKVLETFRNFPQSALALVDKLLTIEPENRGSA----ASALRSEFFKTE 446 (665)
Q Consensus 402 ~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa----~eaL~Hp~f~~~ 446 (665)
......+++.+.+||.+||..||.+|+++ .++++||||...
T Consensus 213 ----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~ 257 (323)
T cd05575 213 ----LRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI 257 (323)
T ss_pred ----CCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence 01123578999999999999999999998 699999999763
No 115
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.6e-43 Score=377.80 Aligned_cols=276 Identities=26% Similarity=0.337 Sum_probs=213.3
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
..|++++.||+|+||.||+|++..+++.||+|+..... ...|+.+|++++||||+++++++.... ..|+||
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~--------~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~ 136 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT--------TLIEAMLLQNVNHPSVIRMKDTLVSGA-ITCMVL 136 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc--------cHHHHHHHHhCCCCCCcChhheEEeCC-eeEEEE
Confidence 36999999999999999999999999999999754322 246999999999999999999988754 789999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
||+.+++...+......+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ...
T Consensus 137 e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~--~~~ 214 (357)
T PHA03209 137 PHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP--AFL 214 (357)
T ss_pred EccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCc--ccc
Confidence 999999888887767789999999999999999999999999999999999999999999999999997543221 223
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCC-CCCCCCC---------hHHHHHHHHHhcCCCChhHHhhh
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGK-PIMPGRT---------EVEQMHKIFKLCGSPSEDYWRKS 387 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~-~pF~g~~---------~~e~l~kI~~~~g~p~~~~~~~~ 387 (665)
...||+.|+|||++.+ ..++.++|||||||++|||+++. ++|.... ...++..+...++..+..+....
T Consensus 215 ~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 293 (357)
T PHA03209 215 GLAGTVETNAPEVLAR-DKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDP 293 (357)
T ss_pred cccccccccCCeecCC-CCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCC
Confidence 4578999999999986 56899999999999999999855 5554322 12344555555554444332110
Q ss_pred cccccc-----CCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCC
Q 006004 388 KSAHAT-----SFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKT 445 (665)
Q Consensus 388 ~~~~~~-----~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~ 445 (665)
...... ......++..........++.++.+||.+||+.||.+||||.|+|+||||+.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 294 GSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred ccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 000000 0001111111111122367888999999999999999999999999999975
No 116
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=7.7e-43 Score=376.10 Aligned_cols=259 Identities=29% Similarity=0.408 Sum_probs=207.8
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
.++|+++++||+|+||.||+|++..+++.||||++.... .......+.+|+++|+.++|+||+++++++.... .+|+|
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv 150 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNG-EIQVL 150 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCC-eEEEE
Confidence 457999999999999999999999999999999986443 3344567889999999999999999999987654 79999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|||+.++.+... ..+.+..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++..+.... ...
T Consensus 151 ~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~ 225 (353)
T PLN00034 151 LEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM-DPC 225 (353)
T ss_pred EecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccc-ccc
Confidence 999998765322 246788899999999999999999999999999999999999999999999998764322 123
Q ss_pred ccccccccccCcccccC----CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc
Q 006004 317 TSRVVTLWYRAPELLLG----ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA 392 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~----~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~ 392 (665)
...+||..|+|||++.. ...++.++|||||||+||+|++|+.||......+....+.......
T Consensus 226 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~------------- 292 (353)
T PLN00034 226 NSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQ------------- 292 (353)
T ss_pred cccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccC-------------
Confidence 45579999999998743 1344678999999999999999999997433222211111110000
Q ss_pred cCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCC
Q 006004 393 TSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEP 447 (665)
Q Consensus 393 ~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~ 447 (665)
.......++.++++||.+||..||++|||+.|+|+||||....
T Consensus 293 ------------~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~ 335 (353)
T PLN00034 293 ------------PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ 335 (353)
T ss_pred ------------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence 0011235788999999999999999999999999999998754
No 117
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=8e-43 Score=372.95 Aligned_cols=264 Identities=23% Similarity=0.337 Sum_probs=214.8
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCC-CCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFAN-MDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
++|++++.||+|+||.||++++..+++.||+|++.... ........+.+|+.++..++|+||+++++++...+ .+|||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~-~~~lv 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDEN-YLYLV 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-EEEEE
Confidence 47999999999999999999999999999999987532 22334456788999999999999999999998765 79999
Q ss_pred EEeccccchh-hhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 237 FEYMEHDLAG-LATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 237 ~Ey~~g~ll~-~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
|||+.|+.+. .+......+++..++.++.||+.||+|||++||+||||||+||||+.++.+||+|||++..+.......
T Consensus 80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 159 (331)
T cd05624 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQ 159 (331)
T ss_pred EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCcee
Confidence 9999875544 444435579999999999999999999999999999999999999999999999999998765433222
Q ss_pred cccccccccccCcccccCC----cccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 316 LTSRVVTLWYRAPELLLGA----TKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~----~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
....+||+.|+|||++.+. ..++.++|||||||+||+|++|+.||.+.+..+.+.++......+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~------------ 227 (331)
T cd05624 160 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF------------ 227 (331)
T ss_pred eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcc------------
Confidence 2345799999999998642 357889999999999999999999999888777766664311000
Q ss_pred ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCC--CcCHHHHHhCcCCCCC
Q 006004 392 ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPEN--RGSAASALRSEFFKTE 446 (665)
Q Consensus 392 ~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~--RpTa~eaL~Hp~f~~~ 446 (665)
+ +......++..+++||.+||..++.+ |+++.++++||||...
T Consensus 228 --------~----~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 228 --------Q----FPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred --------c----CCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 0 01112357899999999999976655 5699999999999863
No 118
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.1e-42 Score=371.62 Aligned_cols=289 Identities=37% Similarity=0.626 Sum_probs=236.9
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc---CCcEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR---SGSLY 234 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~---~~~l~ 234 (665)
++|++.+.||+|+||.||+|++..+|+.||+|++............+.+|+.+|++++||||+++++++... ...+|
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 579999999999999999999999999999999876543334556678899999999999999999987642 24689
Q ss_pred EEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC-
Q 006004 235 LVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN- 313 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~- 313 (665)
+||||+.+++...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 85 lv~e~~~~~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 163 (334)
T cd07855 85 VVMDLMESDLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE 163 (334)
T ss_pred EEEehhhhhHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcC
Confidence 99999998776666544 4699999999999999999999999999999999999999999999999999977543221
Q ss_pred --CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 314 --LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 314 --~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
......+++.+|+|||++.+...++.++|||||||++|+|++|++||.+.+...++..+....|.++...+.......
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 243 (334)
T cd07855 164 HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDR 243 (334)
T ss_pred CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhh
Confidence 122345789999999998765568999999999999999999999999999999999999999999887765432211
Q ss_pred ccC----CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCCC
Q 006004 392 ATS----FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPLP 449 (665)
Q Consensus 392 ~~~----~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~~ 449 (665)
... +....+ ......++.++.++.+||.+||+.||.+|||+.++|.||||...+.+
T Consensus 244 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~ 303 (334)
T cd07855 244 VRKYIQNLPRKQP--VPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDP 303 (334)
T ss_pred HHHHHhhcccCCC--CCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCC
Confidence 111 111111 11223345689999999999999999999999999999999876544
No 119
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=5.9e-43 Score=371.61 Aligned_cols=251 Identities=25% Similarity=0.385 Sum_probs=206.7
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcEEEEEEecc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSLYLVFEYME 241 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l~lV~Ey~~ 241 (665)
+.||+|+||.||+|+++.+|+.||+|+++.... .......+..|+.++..+ +||||+++++++...+ .+|+||||+.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~-~~~lv~E~~~ 79 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKE-HLFFVMEFLN 79 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCC-EEEEEECCCC
Confidence 469999999999999999999999999975432 123345567788888765 8999999999998765 8999999999
Q ss_pred ccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccccc
Q 006004 242 HDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVV 321 (665)
Q Consensus 242 g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~g 321 (665)
++.+.........+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||++....... ......+|
T Consensus 80 ~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~g 158 (316)
T cd05620 80 GGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD-NRASTFCG 158 (316)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC-CceeccCC
Confidence 76655444455679999999999999999999999999999999999999999999999999987542221 22345679
Q ss_pred cccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcc
Q 006004 322 TLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPY 401 (665)
Q Consensus 322 T~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~ 401 (665)
|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+... .+
T Consensus 159 t~~y~aPE~~~~-~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~--~~---------------------- 213 (316)
T cd05620 159 TPDYIAPEILQG-LKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD--TP---------------------- 213 (316)
T ss_pred CcCccCHHHHcC-CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CC----------------------
Confidence 999999999986 57899999999999999999999999988876665554321 00
Q ss_pred hhhhhhhccCCcHHHHHHHHHhcccCcCCCcCH-HHHHhCcCCCCC
Q 006004 402 KRKVLETFRNFPQSALALVDKLLTIEPENRGSA-ASALRSEFFKTE 446 (665)
Q Consensus 402 ~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa-~eaL~Hp~f~~~ 446 (665)
.....++.++.+||.+||..||.+|+++ +++++||||...
T Consensus 214 -----~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 214 -----HYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI 254 (316)
T ss_pred -----CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence 0112478899999999999999999998 588899999864
No 120
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-44 Score=364.38 Aligned_cols=260 Identities=27% Similarity=0.407 Sum_probs=228.9
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEE
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~ 234 (665)
..++|..++.||+|+||.|-+|+.+.+|+.||||++++..+ ..+.+..-..|-.+|+.++||.+..|...|+..+ .+|
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~d-rlC 244 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQD-RLC 244 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCc-eEE
Confidence 45689999999999999999999999999999999987754 5667777889999999999999999999998866 899
Q ss_pred EEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC
Q 006004 235 LVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL 314 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~ 314 (665)
+||||..|+-+...+.+...|+|+.++.|-..|+.||.|||+++||+||||.+|+|||.+|++||+||||+..-- ....
T Consensus 245 FVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I-~~g~ 323 (516)
T KOG0690|consen 245 FVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI-KYGD 323 (516)
T ss_pred EEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcc-cccc
Confidence 999999998888777777789999999999999999999999999999999999999999999999999997532 2223
Q ss_pred CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccC
Q 006004 315 PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATS 394 (665)
Q Consensus 315 ~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~ 394 (665)
...++||||.|+|||++.. ..|+.++|+|.+||++|||++|+.||...+.......|...-
T Consensus 324 t~kTFCGTPEYLAPEVleD-nDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed------------------ 384 (516)
T KOG0690|consen 324 TTKTFCGTPEYLAPEVLED-NDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMED------------------ 384 (516)
T ss_pred eeccccCChhhcCchhhcc-ccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhh------------------
Confidence 4678899999999999986 789999999999999999999999999988766666654321
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC-----HHHHHhCcCCCCCC
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS-----AASALRSEFFKTEP 447 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT-----a~eaL~Hp~f~~~~ 447 (665)
...+..++++++.|+..+|.+||.+|.. |.++.+|+||....
T Consensus 385 -----------~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~ 431 (516)
T KOG0690|consen 385 -----------LKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVD 431 (516)
T ss_pred -----------ccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCC
Confidence 1123479999999999999999999964 89999999999754
No 121
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=8e-43 Score=372.67 Aligned_cols=252 Identities=24% Similarity=0.405 Sum_probs=204.4
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcEEEEEEecc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSLYLVFEYME 241 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l~lV~Ey~~ 241 (665)
+.||+|+||.||+|++..+++.||||+++.... ..+....+.+|+.+++.+ +||||+++++++.... .+||||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~-~~~lv~e~~~ 79 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTES-RLFFVIEFVS 79 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCC-EEEEEEeCCC
Confidence 369999999999999999999999999986533 234456788999999998 7999999999998765 7999999999
Q ss_pred ccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccccc
Q 006004 242 HDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVV 321 (665)
Q Consensus 242 g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~g 321 (665)
++.+..+......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... .......+|
T Consensus 80 ~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~g 158 (329)
T cd05588 80 GGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP-GDTTSTFCG 158 (329)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccC-CCccccccC
Confidence 8666555545568999999999999999999999999999999999999999999999999998753221 122345689
Q ss_pred cccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCCh--------HHHHHHHHHhcCCCChhHHhhhcccccc
Q 006004 322 TLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTE--------VEQMHKIFKLCGSPSEDYWRKSKSAHAT 393 (665)
Q Consensus 322 T~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~--------~e~l~kI~~~~g~p~~~~~~~~~~~~~~ 393 (665)
|+.|+|||++.+ ..++.++|+|||||++|+|++|+.||..... .+.+.+....
T Consensus 159 t~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~------------------ 219 (329)
T cd05588 159 TPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE------------------ 219 (329)
T ss_pred CccccCHHHHcC-CCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc------------------
Confidence 999999999986 6789999999999999999999999963211 1111111100
Q ss_pred CCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC------HHHHHhCcCCCCC
Q 006004 394 SFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS------AASALRSEFFKTE 446 (665)
Q Consensus 394 ~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT------a~eaL~Hp~f~~~ 446 (665)
........++..+.+||.+||..||.+|+| +.++++||||...
T Consensus 220 ----------~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~ 268 (329)
T cd05588 220 ----------KQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNI 268 (329)
T ss_pred ----------CCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 000112357889999999999999999987 7999999999753
No 122
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-44 Score=384.31 Aligned_cols=259 Identities=27% Similarity=0.415 Sum_probs=221.8
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
+.|+++..||.|+||.||+|..++++-..|.|+|... ..+.+..+.-||+||..|+||+||+|++.|..++ .+||+.
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk--seEELEDylVEIeILa~CdHP~ivkLl~ayy~en-kLwili 108 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK--SEEELEDYLVEIEILAECDHPVIVKLLSAYYFEN-KLWILI 108 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc--chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC-ceEEEE
Confidence 3588999999999999999999999998999988643 3567788889999999999999999999877654 899999
Q ss_pred Eeccccchh-hhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 238 EYMEHDLAG-LATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 238 Ey~~g~ll~-~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|||.|+-.+ .++.-+..|++.++..+++|+|.||.|||+++|||||||..|||++-+|.++|+|||.+..... .....
T Consensus 109 EFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~-t~qkR 187 (1187)
T KOG0579|consen 109 EFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS-TRQKR 187 (1187)
T ss_pred eecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchh-HHhhh
Confidence 999987665 3444566899999999999999999999999999999999999999999999999999875432 22345
Q ss_pred ccccccccccCcccccC----CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc
Q 006004 317 TSRVVTLWYRAPELLLG----ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA 392 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~----~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~ 392 (665)
.+++|||+|||||++.+ ..+|++++|||||||+|.||..+.||-...+....+.+|.+- -++..
T Consensus 188 DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS---ePPTL--------- 255 (1187)
T KOG0579|consen 188 DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---EPPTL--------- 255 (1187)
T ss_pred ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc---CCCcc---------
Confidence 67899999999999863 468999999999999999999999999888888777777651 11111
Q ss_pred cCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 393 TSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 393 ~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
..+..++..+.||+.+||.+||..||+++++|+||||.+.
T Consensus 256 --------------lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~ 295 (1187)
T KOG0579|consen 256 --------------LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNA 295 (1187)
T ss_pred --------------cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccC
Confidence 1223678889999999999999999999999999999975
No 123
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=9.6e-43 Score=355.12 Aligned_cols=260 Identities=32% Similarity=0.489 Sum_probs=212.7
Q ss_pred eeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEe
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEY 239 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey 239 (665)
|++++.||+|+||+||++++..+++.||+|++..............+|+.++++++||||+++++++.... .+++||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDN-YLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESS-EEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccc-cccccccc
Confidence 88999999999999999999999999999999876544444444567999999999999999999998754 78999999
Q ss_pred ccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccc
Q 006004 240 MEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSR 319 (665)
Q Consensus 240 ~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~ 319 (665)
+.++.+..+......+++.++..++.||+.||.+||++||+|+||||+|||++.++.++|+|||++.... .........
T Consensus 80 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-~~~~~~~~~ 158 (260)
T PF00069_consen 80 CPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS-ENNENFNPF 158 (260)
T ss_dssp ETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEEST-STTSEBSSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccc
Confidence 9995444444344579999999999999999999999999999999999999999999999999998652 222334556
Q ss_pred cccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCC
Q 006004 320 VVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQ 399 (665)
Q Consensus 320 ~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~ 399 (665)
.+|..|+|||++.....++.++||||||+++|+|++|..||......+....+.+.........+
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 223 (260)
T PF00069_consen 159 VGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSS--------------- 223 (260)
T ss_dssp SSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHT---------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccc---------------
Confidence 78999999999873467899999999999999999999999988544444444333211111100
Q ss_pred cchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 400 PYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 400 p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
......+..+.+||.+||+.||.+|||+.++++||||
T Consensus 224 -------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 224 -------QQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp -------TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred -------cccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 0001234789999999999999999999999999998
No 124
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.6e-43 Score=381.28 Aligned_cols=281 Identities=25% Similarity=0.340 Sum_probs=219.0
Q ss_pred CCeeEEEEeeccCceEEEEEEEC--CCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDL--ETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~--~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~l 235 (665)
.+|++++.||+|+||.||+|... .+++.||+|.+.... ...+|+.+|++|+|||||++++++.... .+|+
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~-------~~~~E~~il~~l~h~~iv~~~~~~~~~~-~~~l 163 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK-------TPGREIDILKTISHRAIINLIHAYRWKS-TVCM 163 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc-------cHHHHHHHHHhcCCCCccceeeeEeeCC-EEEE
Confidence 37999999999999999999764 356789999876421 2457999999999999999999988754 7899
Q ss_pred EEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC-
Q 006004 236 VFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL- 314 (665)
Q Consensus 236 V~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~- 314 (665)
|||++.+++...+ .....+++.+++.|+.||+.||.|||++||+||||||+||||+.++.+||+|||++..+......
T Consensus 164 v~e~~~~~l~~~l-~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~ 242 (392)
T PHA03207 164 VMPKYKCDLFTYV-DRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTP 242 (392)
T ss_pred EehhcCCCHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccc
Confidence 9999998888777 34457999999999999999999999999999999999999999999999999999876543221
Q ss_pred CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCC---hHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 315 PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRT---EVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 315 ~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~---~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
.....+||+.|+|||++.+ ..|+.++|||||||+||+|++|+.||.+.. ...++..+.+.++..+.++........
T Consensus 243 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~ 321 (392)
T PHA03207 243 QCYGWSGTLETNSPELLAL-DPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNL 321 (392)
T ss_pred cccccccccCccCHhHhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhH
Confidence 2234579999999999876 568999999999999999999999997754 456777777777665544322110000
Q ss_pred -----ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCC
Q 006004 392 -----ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPL 448 (665)
Q Consensus 392 -----~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~ 448 (665)
........++.......-..++.++.+||.+||.+||++|||+.++|+||||...+.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~ 383 (392)
T PHA03207 322 CKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPI 383 (392)
T ss_pred HHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccch
Confidence 000000111110000011246788999999999999999999999999999987543
No 125
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.5e-43 Score=372.92 Aligned_cols=251 Identities=27% Similarity=0.426 Sum_probs=209.8
Q ss_pred EEeeccCceEEEEEEE---CCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEec
Q 006004 164 DKIGQGTYSSVYKARD---LETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYM 240 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~---~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~ 240 (665)
+.||+|+||.||++++ ..+|+.||+|++............+.+|+++|++++||||+++++++.... .+|+||||+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEG-KLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCC-EEEEEEcCC
Confidence 6799999999999986 357899999999865433334455778999999999999999999998754 799999999
Q ss_pred cccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccccc
Q 006004 241 EHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRV 320 (665)
Q Consensus 241 ~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~ 320 (665)
.++.+.........+++.+++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... .......
T Consensus 81 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~ 159 (318)
T cd05582 81 RGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-KKAYSFC 159 (318)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-Cceeccc
Confidence 875554444445579999999999999999999999999999999999999999999999999998654322 2234567
Q ss_pred ccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCc
Q 006004 321 VTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQP 400 (665)
Q Consensus 321 gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p 400 (665)
||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.....
T Consensus 160 g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~----------------------- 215 (318)
T cd05582 160 GTVEYMAPEVVNR-RGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL----------------------- 215 (318)
T ss_pred CChhhcCHHHHcC-CCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC-----------------------
Confidence 8999999999876 5678999999999999999999999999887777766543110
Q ss_pred chhhhhhhccCCcHHHHHHHHHhcccCcCCCcC-----HHHHHhCcCCCCC
Q 006004 401 YKRKVLETFRNFPQSALALVDKLLTIEPENRGS-----AASALRSEFFKTE 446 (665)
Q Consensus 401 ~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT-----a~eaL~Hp~f~~~ 446 (665)
.....+++.+.+||.+||+.||.+||| +.+++.||||...
T Consensus 216 ------~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 216 ------GMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred ------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 111357889999999999999999999 7889999999863
No 126
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=8.7e-43 Score=370.42 Aligned_cols=251 Identities=27% Similarity=0.434 Sum_probs=210.5
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcEEEEEEecc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSLYLVFEYME 241 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l~lV~Ey~~ 241 (665)
+.||+|+||.||+|++..+++.||||+++.... .......+.+|+.+++.+ +||||+++++++.... .+|+||||+.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~-~~~lv~e~~~ 79 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKD-RLFFVMEYVN 79 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC-EEEEEEcCCC
Confidence 369999999999999999999999999986432 233456677899999988 7999999999988765 7999999999
Q ss_pred ccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccccc
Q 006004 242 HDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVV 321 (665)
Q Consensus 242 g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~g 321 (665)
++.+.........+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ......+|
T Consensus 80 ~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~g 158 (318)
T cd05570 80 GGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-VTTSTFCG 158 (318)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCC-Ccccceec
Confidence 87666555555689999999999999999999999999999999999999999999999999987532221 22334578
Q ss_pred cccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcc
Q 006004 322 TLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPY 401 (665)
Q Consensus 322 T~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~ 401 (665)
|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+....+.... .
T Consensus 159 ~~~y~aPE~~~~-~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~--------------------~---- 213 (318)
T cd05570 159 TPDYIAPEILSY-QPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDE--------------------V---- 213 (318)
T ss_pred CccccCHHHhcC-CCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC--------------------C----
Confidence 999999999986 678999999999999999999999999887766655553210 0
Q ss_pred hhhhhhhccCCcHHHHHHHHHhcccCcCCCcCH-----HHHHhCcCCCCC
Q 006004 402 KRKVLETFRNFPQSALALVDKLLTIEPENRGSA-----ASALRSEFFKTE 446 (665)
Q Consensus 402 ~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa-----~eaL~Hp~f~~~ 446 (665)
.....++..+.+||.+||..||.+|||+ .+++.||||+..
T Consensus 214 -----~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 214 -----RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred -----CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 0113578899999999999999999999 999999999863
No 127
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=3.4e-42 Score=368.21 Aligned_cols=288 Identities=37% Similarity=0.599 Sum_probs=232.2
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC----CcE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS----GSL 233 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~----~~l 233 (665)
++|++.+.||+|+||.||+|++..+|+.||||++..... ......+.+|+.++++++||||+++++++.... ..+
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH-QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 579999999999999999999999999999999864322 234455778999999999999999998876432 357
Q ss_pred EEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC
Q 006004 234 YLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 234 ~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~ 313 (665)
|+||||+.+++...+.. ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++........
T Consensus 84 ~lv~e~~~~~l~~~~~~--~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 161 (336)
T cd07849 84 YIVQELMETDLYKLIKT--QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHD 161 (336)
T ss_pred EEEehhcccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccccc
Confidence 99999999887766543 3699999999999999999999999999999999999999999999999999987543221
Q ss_pred --CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 314 --LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 314 --~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
......+||+.|+|||++.+...++.++|||||||++|+|++|++||.+.+...++..+....+.+..+.|.......
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (336)
T cd07849 162 HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLR 241 (336)
T ss_pred ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchh
Confidence 122345789999999988765678999999999999999999999999999888899898888888777665432221
Q ss_pred ccCCCCCCcc--hhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCC
Q 006004 392 ATSFKPQQPY--KRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPL 448 (665)
Q Consensus 392 ~~~~~~~~p~--~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~ 448 (665)
...+....+. ..........+++.+.+||.+||+.||.+|||+.++|+||||.....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~ 300 (336)
T cd07849 242 ARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD 300 (336)
T ss_pred hhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence 1111100010 11122233467889999999999999999999999999999986543
No 128
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.8e-42 Score=368.99 Aligned_cols=256 Identities=26% Similarity=0.412 Sum_probs=213.3
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCC-CCCcceeeeeeeccCCcEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLD-HPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~~l~lV 236 (665)
+|+..+.||+|+||.||+|+++.+|+.||||+++.... .....+.+..|+.+++.+. |++|+++++++.... .+|+|
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~-~~~lv 79 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVD-RLYFV 79 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCC-EEEEE
Confidence 48899999999999999999999999999999975432 2334556778999998886 577888999887754 79999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|||+.++.+.........+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ...
T Consensus 80 ~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~-~~~ 158 (323)
T cd05615 80 MEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG-VTT 158 (323)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC-ccc
Confidence 9999976665555555579999999999999999999999999999999999999999999999999987643221 122
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFK 396 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~ 396 (665)
...+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+....+..+.....
T Consensus 159 ~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~------------------- 218 (323)
T cd05615 159 RTFCGTPDYIAPEIIAY-QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV------------------- 218 (323)
T ss_pred cCccCCccccCHHHHcC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-------------------
Confidence 34578999999999876 5689999999999999999999999999887776666644210
Q ss_pred CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC-----HHHHHhCcCCCCC
Q 006004 397 PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS-----AASALRSEFFKTE 446 (665)
Q Consensus 397 ~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT-----a~eaL~Hp~f~~~ 446 (665)
.....++.++.+||.+||.+||.+|++ ..++++||||...
T Consensus 219 ----------~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 219 ----------SYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred ----------CCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 111357889999999999999999997 5899999999864
No 129
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.7e-42 Score=357.97 Aligned_cols=281 Identities=42% Similarity=0.794 Sum_probs=229.3
Q ss_pred eeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEe
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEY 239 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey 239 (665)
|++++.||.|++|.||+|.+..+|..||+|++............+.+|+++++.++||||+++++++.... ..|+||||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~-~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSEN-KLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCC-eEEEEEec
Confidence 67889999999999999999999999999999765443333455778999999999999999999988754 78999999
Q ss_pred ccccchhhhcCCC-CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccc
Q 006004 240 MEHDLAGLATTPG-IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTS 318 (665)
Q Consensus 240 ~~g~ll~~~~~~~-~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~ 318 (665)
+++.+...+.... ..+++..+..++.||+.||.|||+++++|+||+|+|||++.++.++|+|||++..+..... ....
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~ 158 (283)
T cd07835 80 LDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR-TYTH 158 (283)
T ss_pred cCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc-ccCc
Confidence 9877666554432 3689999999999999999999999999999999999999999999999999976543221 1233
Q ss_pred ccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc-cCCCC
Q 006004 319 RVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA-TSFKP 397 (665)
Q Consensus 319 ~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~-~~~~~ 397 (665)
..++..|+|||++.+...++.++|+|||||++|+|++|++||.+.+..+.+.++.+..+.+....|........ ....+
T Consensus 159 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd07835 159 EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFP 238 (283)
T ss_pred cccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcc
Confidence 46689999999887655678999999999999999999999999999888888988888888877754322110 00000
Q ss_pred CCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 398 QQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 398 ~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
..+ ..........++..+.+||.+||+.||.+|||+.++|.||||
T Consensus 239 ~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 239 KWA-RQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred ccc-ccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 000 011223345788999999999999999999999999999998
No 130
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=6.3e-42 Score=357.31 Aligned_cols=281 Identities=37% Similarity=0.652 Sum_probs=224.7
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++++.||+|+||.||+|.+..+|..||||.+...... .....+.+|+.+++.++|+||+++++++.... ..|+||
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-~~~lv~ 82 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE-GVPFTAIREASLLKGLKHANIVLLHDIIHTKE-TLTFVF 82 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC-CCcHHHHHHHHHHHhcCCCCEeEEEEEEecCC-eEEEEE
Confidence 5799999999999999999999999999999998654322 22234578999999999999999999988754 789999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
||+.++++..+......+++.+++.++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++....... ....
T Consensus 83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~~ 161 (291)
T cd07870 83 EYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS-QTYS 161 (291)
T ss_pred ecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC-CCCC
Confidence 999988887766555568899999999999999999999999999999999999999999999999997643322 1223
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCC-hHHHHHHHHHhcCCCChhHHhhhcccccc---
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRT-EVEQMHKIFKLCGSPSEDYWRKSKSAHAT--- 393 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~-~~e~l~kI~~~~g~p~~~~~~~~~~~~~~--- 393 (665)
...+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.+ ..+.+.++....+.|....|.........
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (291)
T cd07870 162 SEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPE 241 (291)
T ss_pred CccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccch
Confidence 44679999999998765568889999999999999999999997654 45677778888888877776554321111
Q ss_pred CCCCCCcchhhhhhhcc--CCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 394 SFKPQQPYKRKVLETFR--NFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 394 ~~~~~~p~~~~~~~~~~--~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.+.... .......+. ..+..+.+||.+||..||.+|||+.++|.||||
T Consensus 242 ~~~~~~--~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 242 WFLPCK--PQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred hccccC--CcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 000000 011111111 236789999999999999999999999999998
No 131
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=3.2e-42 Score=367.63 Aligned_cols=295 Identities=43% Similarity=0.780 Sum_probs=238.6
Q ss_pred CCeeEE-EEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHH------------HHHHHHHHHHHHhCCCCCcceeee
Q 006004 158 DAFEKI-DKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPES------------VRFMAREIHILRKLDHPNVMKLEG 224 (665)
Q Consensus 158 ~~y~~~-~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~------------~~~~~~Ei~iL~~L~HpnIV~l~~ 224 (665)
++|..+ +.||.|+||.||+|++..+++.||||+++........ ...+.+|++++++++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 467654 6799999999999999999999999998754322100 124678999999999999999999
Q ss_pred eeeccCCcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEeccc
Q 006004 225 LVTSRSGSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGL 304 (665)
Q Consensus 225 ~~~~~~~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGl 304 (665)
++.... .+|+||||+.+++...+.. ...+++..+..++.||+.||.|||+.||+|+||+|+|||++.++.+||+|||+
T Consensus 88 ~~~~~~-~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~ 165 (335)
T PTZ00024 88 VYVEGD-FINLVMDIMASDLKKVVDR-KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGL 165 (335)
T ss_pred EEecCC-cEEEEEeccccCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccc
Confidence 988755 7899999999887776654 44699999999999999999999999999999999999999999999999999
Q ss_pred ceecCCC-------------CCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHH
Q 006004 305 ATTYDPS-------------QNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHK 371 (665)
Q Consensus 305 A~~~~~~-------------~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~k 371 (665)
+..+... .........+++.|+|||++.+...++.++|+|||||++|+|++|.+||.+.++.+.+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~ 245 (335)
T PTZ00024 166 ARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGR 245 (335)
T ss_pred eeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 9876411 111223345788999999998756679999999999999999999999999999999999
Q ss_pred HHHhcCCCChhHHhhhcccc-ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCCCC
Q 006004 372 IFKLCGSPSEDYWRKSKSAH-ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPLPC 450 (665)
Q Consensus 372 I~~~~g~p~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~~~ 450 (665)
+...++.+....|....... ...+.... .......+...+..+.+||.+||..||.+|||++++|.||||...+.++
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~~~ 323 (335)
T PTZ00024 246 IFELLGTPNEDNWPQAKKLPLYTEFTPRK--PKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLPC 323 (335)
T ss_pred HHHHhCCCchhhCcchhhcccccccCcCC--cccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCCCC
Confidence 99999988877665432111 01111111 1223334556789999999999999999999999999999999998888
Q ss_pred CCCCCC
Q 006004 451 DPSNLP 456 (665)
Q Consensus 451 ~p~~~p 456 (665)
++..+|
T Consensus 324 ~~~~~~ 329 (335)
T PTZ00024 324 DPSQLP 329 (335)
T ss_pred CcccCC
Confidence 777655
No 132
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=373.64 Aligned_cols=269 Identities=29% Similarity=0.437 Sum_probs=224.0
Q ss_pred CccCCCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHH-HHHHHHHHHHHHHhCCCCCcceeeeeeeccC
Q 006004 152 WQPRRADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPE-SVRFMAREIHILRKLDHPNVMKLEGLVTSRS 230 (665)
Q Consensus 152 ~~~~~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~-~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~ 230 (665)
++|...+.|+.-+.||+|+||.||-|+-..||+.||+|++.+..+... -....++|..||.+++.++||.+-..|++.+
T Consensus 179 ~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd 258 (591)
T KOG0986|consen 179 LQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKD 258 (591)
T ss_pred hhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCC
Confidence 356677889999999999999999999999999999999865544222 2234568999999999999999999999876
Q ss_pred CcEEEEEEeccccchhhhcCCC--CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceec
Q 006004 231 GSLYLVFEYMEHDLAGLATTPG--IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTY 308 (665)
Q Consensus 231 ~~l~lV~Ey~~g~ll~~~~~~~--~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~ 308 (665)
.+||||..|+|+.+...+... ..|+|..+++|+.+|+.||++||+.+||+|||||+|||||+.|+++|+|+|||..+
T Consensus 259 -~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei 337 (591)
T KOG0986|consen 259 -ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEI 337 (591)
T ss_pred -ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEec
Confidence 899999999986665544433 36999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhc
Q 006004 309 DPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSK 388 (665)
Q Consensus 309 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~ 388 (665)
.... +...++||.+|||||++.+ ..|+..+|+|||||+||||+.|+.||....+..-...+-+..-.-+.
T Consensus 338 ~~g~--~~~~rvGT~GYMAPEvl~n-e~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~------- 407 (591)
T KOG0986|consen 338 PEGK--PIRGRVGTVGYMAPEVLQN-EVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPE------- 407 (591)
T ss_pred CCCC--ccccccCcccccCHHHHcC-CcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchh-------
Confidence 6543 4677799999999999987 45999999999999999999999999876544333332221111111
Q ss_pred cccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCc-----CHHHHHhCcCCCCCCCC
Q 006004 389 SAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRG-----SAASALRSEFFKTEPLP 449 (665)
Q Consensus 389 ~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~Rp-----Ta~eaL~Hp~f~~~~~~ 449 (665)
+....||+++++|.+.+|.+||.+|. +++++.+||||++..+.
T Consensus 408 ------------------ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~ 455 (591)
T KOG0986|consen 408 ------------------EYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWR 455 (591)
T ss_pred ------------------hcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHh
Confidence 22347999999999999999999995 57899999999987654
No 133
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.1e-43 Score=374.35 Aligned_cols=251 Identities=27% Similarity=0.390 Sum_probs=206.1
Q ss_pred eeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhC---CCCCcceeeeeeeccCCcEEEEEEecc
Q 006004 166 IGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKL---DHPNVMKLEGLVTSRSGSLYLVFEYME 241 (665)
Q Consensus 166 LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L---~HpnIV~l~~~~~~~~~~l~lV~Ey~~ 241 (665)
||+|+||+||+|++..+++.||||++..... .......+..|..++..+ .||||+++++++.... .+|+||||+.
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~-~~~lv~e~~~ 79 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDS-DLYLVTDYMS 79 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCC-eEEEEEcCCC
Confidence 7999999999999999999999999975432 223344456677887765 6999999999998765 7999999998
Q ss_pred ccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccccc
Q 006004 242 HDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVV 321 (665)
Q Consensus 242 g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~g 321 (665)
++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ......+|
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~g 158 (330)
T cd05586 80 GGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KTTNTFCG 158 (330)
T ss_pred CChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CCccCccC
Confidence 76655555555679999999999999999999999999999999999999999999999999987643222 22345679
Q ss_pred cccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcc
Q 006004 322 TLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPY 401 (665)
Q Consensus 322 T~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~ 401 (665)
|+.|+|||++.+...++.++|||||||+||+|++|..||.+.+..+.+..+...... .+
T Consensus 159 t~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~--------------------~~- 217 (330)
T cd05586 159 TTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVR--------------------FP- 217 (330)
T ss_pred CccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCC--------------------CC-
Confidence 999999999986566899999999999999999999999988776666555321000 00
Q ss_pred hhhhhhhccCCcHHHHHHHHHhcccCcCCCc----CHHHHHhCcCCCCC
Q 006004 402 KRKVLETFRNFPQSALALVDKLLTIEPENRG----SAASALRSEFFKTE 446 (665)
Q Consensus 402 ~~~~~~~~~~~s~~a~dLI~~lL~~DP~~Rp----Ta~eaL~Hp~f~~~ 446 (665)
...+++++.+||.+||..||.+|+ ++.++++||||...
T Consensus 218 -------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 218 -------KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred -------CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence 014788999999999999999998 79999999999863
No 134
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-42 Score=373.15 Aligned_cols=251 Identities=30% Similarity=0.432 Sum_probs=211.3
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcE-EEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKI-VALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~-vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
.+.+.+.||.|+||+||++.+. |.. ||+|++.......+..+.|.+|+.+|.+|+|||||++++++......++|||
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVt 119 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVT 119 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEE
Confidence 4566677999999999999984 455 9999998766655557889999999999999999999999987654689999
Q ss_pred EeccccchhhhcCC--CCCCChhHHHHHHHHHHHHHHHHHhCC-ccccCCCcccEEEcCCC-cEEEEecccceecCCCCC
Q 006004 238 EYMEHDLAGLATTP--GIKFTEPQIKCYMQQLLRGLEHCHSRG-ILHRDIKGSNLLINNAG-VLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 238 Ey~~g~ll~~~~~~--~~~lse~~i~~i~~QIl~aL~~LH~~g-IiHrDLKPeNILld~~g-~lKL~DFGlA~~~~~~~~ 313 (665)
|||.++.+..+... ...|+...+..|+.||+.||.|||+++ ||||||||+||||+.++ ++||+|||+++......
T Consensus 120 Ey~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~- 198 (362)
T KOG0192|consen 120 EYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK- 198 (362)
T ss_pred EeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc-
Confidence 99998776655544 678999999999999999999999999 99999999999999998 99999999998865432
Q ss_pred CCcccccccccccCcccccC-CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc
Q 006004 314 LPLTSRVVTLWYRAPELLLG-ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA 392 (665)
Q Consensus 314 ~~~~~~~gT~~Y~APE~l~~-~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~ 392 (665)
...+...||+.|||||++.+ ...|+.++|||||||+||||+||..||.+....+....+....-.|
T Consensus 199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp------------- 265 (362)
T KOG0192|consen 199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRP------------- 265 (362)
T ss_pred ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCC-------------
Confidence 33455789999999999985 3689999999999999999999999999998855555543321111
Q ss_pred cCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 393 TSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 393 ~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
......++.+..||.+|+..||.+||+..+++.
T Consensus 266 --------------~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 266 --------------PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred --------------CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 111237889999999999999999999998874
No 135
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=4.3e-42 Score=367.78 Aligned_cols=291 Identities=37% Similarity=0.615 Sum_probs=234.0
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC----CcE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS----GSL 233 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~----~~l 233 (665)
.+|.+++.||+|+||.||+|++..+++.||||.+............+.+|+.+++.++|+||+++++++.... ..+
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 84 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV 84 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence 3799999999999999999999999999999998754333334456678999999999999999999876432 358
Q ss_pred EEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC
Q 006004 234 YLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 234 ~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~ 313 (665)
|+||||+.+++...+... ..+++..+..++.||+.||.|||++|++|+||||+|||++.++.+||+|||++.......
T Consensus 85 ~lv~e~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~- 162 (337)
T cd07858 85 YIVYELMDTDLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG- 162 (337)
T ss_pred EEEEeCCCCCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCc-
Confidence 999999998877666544 479999999999999999999999999999999999999999999999999998764332
Q ss_pred CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccccc
Q 006004 314 LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHAT 393 (665)
Q Consensus 314 ~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~ 393 (665)
.......++..|+|||++.....++.++|||||||++|+|++|++||.+.+....+..+....+.+..+.|.........
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (337)
T cd07858 163 DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKAR 242 (337)
T ss_pred ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhh
Confidence 22345578999999999876556899999999999999999999999999988888888888888877655321111110
Q ss_pred CCCCCCcc--hhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCCCC
Q 006004 394 SFKPQQPY--KRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPLPC 450 (665)
Q Consensus 394 ~~~~~~p~--~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~~~ 450 (665)
.+....+. .......++.+++.+.+||.+||..||.+|||+.++|+||||.....+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~ 301 (337)
T cd07858 243 RYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPS 301 (337)
T ss_pred HHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcc
Confidence 00000000 0111233457899999999999999999999999999999998754443
No 136
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2.1e-42 Score=369.55 Aligned_cols=252 Identities=25% Similarity=0.424 Sum_probs=204.0
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcEEEEEEecc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSLYLVFEYME 241 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l~lV~Ey~~ 241 (665)
+.||+|+||.||+|++..+++.||+|+++.... .......+.+|+.++.++ +||||+++++++.... .+|+||||+.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~-~~~lv~E~~~ 79 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES-RLFFVIEYVN 79 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCC-EEEEEEeCCC
Confidence 369999999999999999999999999986532 334556678899998887 8999999999998765 7999999999
Q ss_pred ccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccccc
Q 006004 242 HDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVV 321 (665)
Q Consensus 242 g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~g 321 (665)
++.+.........+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ......+|
T Consensus 80 ~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~-~~~~~~~g 158 (329)
T cd05618 80 GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DTTSTFCG 158 (329)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-CccccccC
Confidence 87665555555679999999999999999999999999999999999999999999999999987542221 22345679
Q ss_pred cccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCCh--------HHHHHHHHHhcCCCChhHHhhhcccccc
Q 006004 322 TLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTE--------VEQMHKIFKLCGSPSEDYWRKSKSAHAT 393 (665)
Q Consensus 322 T~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~--------~e~l~kI~~~~g~p~~~~~~~~~~~~~~ 393 (665)
|+.|+|||++.+ ..++.++|||||||++|+|++|+.||..... .+.+.+....
T Consensus 159 t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~------------------ 219 (329)
T cd05618 159 TPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE------------------ 219 (329)
T ss_pred CccccCHHHHcC-CCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc------------------
Confidence 999999999986 5789999999999999999999999953211 1111111000
Q ss_pred CCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC------HHHHHhCcCCCCC
Q 006004 394 SFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS------AASALRSEFFKTE 446 (665)
Q Consensus 394 ~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT------a~eaL~Hp~f~~~ 446 (665)
.....+..++..+.+||.+||..||.+|+| +.++++||||+..
T Consensus 220 ----------~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 220 ----------KQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred ----------CCCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 000122357889999999999999999998 5899999999864
No 137
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=3.2e-42 Score=366.25 Aligned_cols=289 Identities=38% Similarity=0.634 Sum_probs=239.5
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC----CcEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS----GSLY 234 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~----~~l~ 234 (665)
+|++.+.||.|+||.||+|++..+++.||||++..........+.+.+|+.+++.++||||+++++++.... ..+|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 489999999999999999999999999999998754433455667889999999999999999999887653 3689
Q ss_pred EEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC-
Q 006004 235 LVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN- 313 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~- 313 (665)
+||||+.+++...+.... .+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||++........
T Consensus 81 lv~e~~~~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~ 159 (330)
T cd07834 81 IVTELMETDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE 159 (330)
T ss_pred EEecchhhhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccc
Confidence 999999987766665444 899999999999999999999999999999999999999999999999999988754321
Q ss_pred -CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc
Q 006004 314 -LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA 392 (665)
Q Consensus 314 -~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~ 392 (665)
.......+|++|+|||++.+...++.++|+|||||++|+|++|++||.+.+..+.+..+....+.+..+.|........
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 239 (330)
T cd07834 160 KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKA 239 (330)
T ss_pred cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccch
Confidence 2234557899999999998754789999999999999999999999999999999999999999988877654322222
Q ss_pred cCCCCC--CcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCC
Q 006004 393 TSFKPQ--QPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPL 448 (665)
Q Consensus 393 ~~~~~~--~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~ 448 (665)
..+... ......+...+..++..+.+||.+||++||.+|||+.++|+||||.....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 240 RNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred hhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 111110 01112233445668999999999999999999999999999999986543
No 138
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.5e-42 Score=369.42 Aligned_cols=251 Identities=26% Similarity=0.379 Sum_probs=206.8
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHH-HHHHhCCCCCcceeeeeeeccCCcEEEEEEecc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREI-HILRKLDHPNVMKLEGLVTSRSGSLYLVFEYME 241 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei-~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~ 241 (665)
+.||+|+||.||+|++..+++.||+|++..... .......+..|. .+++.++||||+++++++.... .+|+||||+.
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~-~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD-KLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCC-eEEEEEeCCC
Confidence 369999999999999999999999999975432 112223344444 4568899999999999988765 7999999999
Q ss_pred ccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccccc
Q 006004 242 HDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVV 321 (665)
Q Consensus 242 g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~g 321 (665)
++.+..+......+++..++.++.||+.||.|||++||+||||||+||||+.++.+||+|||++...... .......+|
T Consensus 80 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~-~~~~~~~~g 158 (325)
T cd05602 80 GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH-NGTTSTFCG 158 (325)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC-CCCcccccC
Confidence 8766655555567999999999999999999999999999999999999999999999999999754322 222345679
Q ss_pred cccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcc
Q 006004 322 TLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPY 401 (665)
Q Consensus 322 T~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~ 401 (665)
|+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+....
T Consensus 159 t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~------------------------- 212 (325)
T cd05602 159 TPEYLAPEVLHK-QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP------------------------- 212 (325)
T ss_pred CccccCHHHHcC-CCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCC-------------------------
Confidence 999999999986 678999999999999999999999999988777766664310
Q ss_pred hhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHH----HHHhCcCCCCC
Q 006004 402 KRKVLETFRNFPQSALALVDKLLTIEPENRGSAA----SALRSEFFKTE 446 (665)
Q Consensus 402 ~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~----eaL~Hp~f~~~ 446 (665)
......+++.+.+||.+||..||.+|+++. ++++|+||...
T Consensus 213 ----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 213 ----LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred ----cCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence 011236889999999999999999999876 89999999753
No 139
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=5.9e-42 Score=350.82 Aligned_cols=257 Identities=28% Similarity=0.449 Sum_probs=212.7
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCC---HHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMD---PESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~---~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~ 234 (665)
+.|++.+.||+|+||.||+|.+..+++.||+|.+...... ......+.+|+.++++++||||+++++++.... .+|
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~ 80 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDE-TLS 80 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCC-eEE
Confidence 4699999999999999999999999999999998754332 223456889999999999999999999998765 899
Q ss_pred EEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC
Q 006004 235 LVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL 314 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~ 314 (665)
+||||+.++.+.........+++..++.++.||+.||.|||+.||+|+||+|+|||++.++.++|+|||++..+......
T Consensus 81 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~ 160 (263)
T cd06625 81 IFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS 160 (263)
T ss_pred EEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccc
Confidence 99999987666554444457899999999999999999999999999999999999999999999999999866432221
Q ss_pred Cc--ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc
Q 006004 315 PL--TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA 392 (665)
Q Consensus 315 ~~--~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~ 392 (665)
.. ....++..|+|||++.+ ..++.++|||||||++|+|++|++||...+..+....+.....
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--------------- 224 (263)
T cd06625 161 GTGMKSVTGTPYWMSPEVISG-EGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPT--------------- 224 (263)
T ss_pred cccccCCCcCccccCcceecc-CCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCC---------------
Confidence 11 34567899999999987 5589999999999999999999999987665554444322100
Q ss_pred cCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 393 TSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 393 ~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.......++..+.+||.+||..||.+|||+.++|+|+||
T Consensus 225 ------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 225 ------------NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred ------------CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 001123578899999999999999999999999999998
No 140
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.4e-42 Score=367.12 Aligned_cols=251 Identities=28% Similarity=0.437 Sum_probs=206.6
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHh-CCCCCcceeeeeeeccCCcEEEEEEecc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRK-LDHPNVMKLEGLVTSRSGSLYLVFEYME 241 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~-L~HpnIV~l~~~~~~~~~~l~lV~Ey~~ 241 (665)
+.||+|+||.||+|++..+++.||||+++.... ..........|+.++.. ++||||+++++++.... .+|+||||+.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~-~~~lv~ey~~ 79 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKE-NLFFVMEYLN 79 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCC-EEEEEEeCCC
Confidence 469999999999999999999999999976432 12234456678888876 49999999999998765 7999999998
Q ss_pred ccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccccc
Q 006004 242 HDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVV 321 (665)
Q Consensus 242 g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~g 321 (665)
++.+.........+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ......+|
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~g 158 (316)
T cd05619 80 GGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-AKTCTFCG 158 (316)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-CceeeecC
Confidence 76555555445579999999999999999999999999999999999999999999999999987643221 12345578
Q ss_pred cccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcc
Q 006004 322 TLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPY 401 (665)
Q Consensus 322 T~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~ 401 (665)
|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+.... +
T Consensus 159 t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~--~---------------------- 213 (316)
T cd05619 159 TPDYIAPEILLG-QKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDN--P---------------------- 213 (316)
T ss_pred CccccCHHHHcC-CCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--C----------------------
Confidence 999999999876 578999999999999999999999999887766655543210 0
Q ss_pred hhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHH-HHHhCcCCCCC
Q 006004 402 KRKVLETFRNFPQSALALVDKLLTIEPENRGSAA-SALRSEFFKTE 446 (665)
Q Consensus 402 ~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~-eaL~Hp~f~~~ 446 (665)
.....++.++.+||.+||..||.+|+++. ++++||||...
T Consensus 214 -----~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05619 214 -----CYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREI 254 (316)
T ss_pred -----CCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCC
Confidence 00124678899999999999999999996 89999999874
No 141
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.1e-42 Score=370.65 Aligned_cols=251 Identities=24% Similarity=0.368 Sum_probs=206.5
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHH-HHHhCCCCCcceeeeeeeccCCcEEEEEEecc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIH-ILRKLDHPNVMKLEGLVTSRSGSLYLVFEYME 241 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~-iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~ 241 (665)
+.||+|+||+||+|++..+|+.||||++..... .......+..|.. +++.++||||+++++++.... .+|+||||+.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~-~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTE-KLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCC-EEEEEEcCCC
Confidence 369999999999999999999999999975422 2233344555655 567799999999999988755 7999999999
Q ss_pred ccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccccc
Q 006004 242 HDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVV 321 (665)
Q Consensus 242 g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~g 321 (665)
++.+.........+++.++..++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... ......+|
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~~~~~g 158 (325)
T cd05604 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS-DTTTTFCG 158 (325)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC-CCcccccC
Confidence 87665555556689999999999999999999999999999999999999999999999999987542221 22345679
Q ss_pred cccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcc
Q 006004 322 TLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPY 401 (665)
Q Consensus 322 T~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~ 401 (665)
|+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+....
T Consensus 159 t~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~------------------------- 212 (325)
T cd05604 159 TPEYLAPEVIRK-QPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP------------------------- 212 (325)
T ss_pred ChhhCCHHHHcC-CCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCC-------------------------
Confidence 999999999876 568999999999999999999999999888776666553310
Q ss_pred hhhhhhhccCCcHHHHHHHHHhcccCcCCCcCH----HHHHhCcCCCCC
Q 006004 402 KRKVLETFRNFPQSALALVDKLLTIEPENRGSA----ASALRSEFFKTE 446 (665)
Q Consensus 402 ~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa----~eaL~Hp~f~~~ 446 (665)
......++..+.+||.+||..||.+||++ .+++.||||...
T Consensus 213 ----~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 213 ----LVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred ----ccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 01113578889999999999999999976 599999999864
No 142
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.2e-42 Score=384.40 Aligned_cols=277 Identities=24% Similarity=0.327 Sum_probs=212.2
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
...|.+.+.||+|+||.||+|++..+++.||||.... ..+.+|+++|++|+|+|||++++++.... ..|||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~-~~~lv 238 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVVGG-LTCLV 238 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEECC-EEEEE
Confidence 3479999999999999999999999999999996432 22468999999999999999999887654 78999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC-C
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL-P 315 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~-~ 315 (665)
||++.++++..+......+++.+++.++.||+.||.|||++||+||||||+||||+.++.+||+|||+++.+...... .
T Consensus 239 ~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 318 (461)
T PHA03211 239 LPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPF 318 (461)
T ss_pred EEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceeccccccccc
Confidence 999999888887766567999999999999999999999999999999999999999999999999999876433221 1
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCC-CCCCC------hHHHHHHHHHhcCCCChhH-----
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPI-MPGRT------EVEQMHKIFKLCGSPSEDY----- 383 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~p-F~g~~------~~e~l~kI~~~~g~p~~~~----- 383 (665)
....+||+.|+|||++.+ ..++.++||||||||||||++|..+ |.... ...++.+++...+....++
T Consensus 319 ~~~~~GT~~Y~APE~~~~-~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~ 397 (461)
T PHA03211 319 HYGIAGTVDTNAPEVLAG-DPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAG 397 (461)
T ss_pred ccccCCCcCCcCHHHHcC-CCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcc
Confidence 224579999999999986 5689999999999999999998754 43321 1234555554433322111
Q ss_pred ---HhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCC
Q 006004 384 ---WRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKT 445 (665)
Q Consensus 384 ---~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~ 445 (665)
............ ...+.......+..++.++.+||.+||.+||.+|||+.|+|+||||+.
T Consensus 398 ~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 398 SRLVSQYRHRAARNR--RPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred hHHHHHHHhhhhccc--CCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 000000000000 000111111222356788999999999999999999999999999974
No 143
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.9e-42 Score=367.75 Aligned_cols=251 Identities=24% Similarity=0.370 Sum_probs=205.0
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHH-HHHhCCCCCcceeeeeeeccCCcEEEEEEecc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIH-ILRKLDHPNVMKLEGLVTSRSGSLYLVFEYME 241 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~-iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~ 241 (665)
+.||+|+||.||+|++..+++.||+|++..... .......+.+|+. +++.++||||+++++++.... .+|+||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~-~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAE-KLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCC-EEEEEEcCCC
Confidence 369999999999999999999999999975432 2223344555554 678899999999999988755 7999999999
Q ss_pred ccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccccc
Q 006004 242 HDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVV 321 (665)
Q Consensus 242 g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~g 321 (665)
++.+.........+++.+++.++.||+.||.|||++||+||||||+||||+.+|.+||+|||++....... ......+|
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~g 158 (321)
T cd05603 80 GGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-ETTSTFCG 158 (321)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-CccccccC
Confidence 87666555555679999999999999999999999999999999999999999999999999987532221 12344578
Q ss_pred cccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcc
Q 006004 322 TLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPY 401 (665)
Q Consensus 322 T~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~ 401 (665)
|+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+....+... +
T Consensus 159 t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~---~---------------------- 212 (321)
T cd05603 159 TPEYLAPEVLRK-EPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK---P---------------------- 212 (321)
T ss_pred CcccCCHHHhcC-CCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC---C----------------------
Confidence 999999999876 56899999999999999999999999988766655554321 0
Q ss_pred hhhhhhhccCCcHHHHHHHHHhcccCcCCCcCH----HHHHhCcCCCCC
Q 006004 402 KRKVLETFRNFPQSALALVDKLLTIEPENRGSA----ASALRSEFFKTE 446 (665)
Q Consensus 402 ~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa----~eaL~Hp~f~~~ 446 (665)
.......+..+.+||.+||+.||.+|+++ .++++|+||...
T Consensus 213 ----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~ 257 (321)
T cd05603 213 ----LQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI 257 (321)
T ss_pred ----CCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence 01123567889999999999999999875 599999999753
No 144
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=8.2e-42 Score=359.50 Aligned_cols=285 Identities=38% Similarity=0.637 Sum_probs=224.6
Q ss_pred CeeEEEEeeccCceEEEEEEECC--CCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-CCcEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLE--TGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-SGSLY 234 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~--~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-~~~l~ 234 (665)
+|++++.||+|+||.||+|.+.. +++.||||.+..... .......+.+|+.+++.++||||+++++++... ...+|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 48999999999999999999988 899999999876331 122335567899999999999999999999876 24799
Q ss_pred EEEEeccccchhhhcC----CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcC----CCcEEEEecccce
Q 006004 235 LVFEYMEHDLAGLATT----PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINN----AGVLKIGDFGLAT 306 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~----~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~----~g~lKL~DFGlA~ 306 (665)
+||||+++++...+.. ....+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++.
T Consensus 81 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~ 160 (316)
T cd07842 81 LLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLAR 160 (316)
T ss_pred EEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcccc
Confidence 9999999887765532 1236899999999999999999999999999999999999999 9999999999998
Q ss_pred ecCCCCC--CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCCh---------HHHHHHHHHh
Q 006004 307 TYDPSQN--LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTE---------VEQMHKIFKL 375 (665)
Q Consensus 307 ~~~~~~~--~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~---------~e~l~kI~~~ 375 (665)
.+..... .......+|+.|+|||++.+...++.++|||||||+||+|++|++||.+.+. ...+..++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (316)
T cd07842 161 LFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEV 240 (316)
T ss_pred ccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHH
Confidence 7643322 1223446799999999988766789999999999999999999999987654 2467778888
Q ss_pred cCCCChhHHhhhccccc-cC---CCCCCcch----hhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 376 CGSPSEDYWRKSKSAHA-TS---FKPQQPYK----RKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 376 ~g~p~~~~~~~~~~~~~-~~---~~~~~p~~----~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
++.+....|........ .. .....++. ....+.....+..+.+||.+||..||.+|||+.+++.||||
T Consensus 241 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 241 LGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred hCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 88887776643221100 00 00001111 11122223678899999999999999999999999999998
No 145
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.5e-41 Score=364.96 Aligned_cols=287 Identities=35% Similarity=0.621 Sum_probs=231.9
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC-----C
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS-----G 231 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~-----~ 231 (665)
.++|++++.||+|+||.||++.+..+|..||||++............+.+|+.+|+.++||||+++++++.... .
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFH 93 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccc
Confidence 35799999999999999999999999999999998654333344556789999999999999999999887542 2
Q ss_pred cEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 232 SLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
.+|+||||+.+++...+.. ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus 94 ~~~lv~e~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 171 (343)
T cd07880 94 DFYLVMPFMGTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE 171 (343)
T ss_pred eEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccC
Confidence 4689999997666555443 36999999999999999999999999999999999999999999999999999865432
Q ss_pred CCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 312 QNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 312 ~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
.....+++.|+|||++.+...++.++|+|||||++|+|++|++||.+.+....+.++.+..+.++.+++.......
T Consensus 172 ----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07880 172 ----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSED 247 (343)
T ss_pred ----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchh
Confidence 2344679999999998765568899999999999999999999999999888899988888887777665543221
Q ss_pred ccCCCCCCc-c-hhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCCC
Q 006004 392 ATSFKPQQP-Y-KRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPLP 449 (665)
Q Consensus 392 ~~~~~~~~p-~-~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~~ 449 (665)
...+....+ . ...+......+++.+.+||.+||..||.+|||+.++|.||||......
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~ 307 (343)
T cd07880 248 AKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDP 307 (343)
T ss_pred HHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCc
Confidence 111100000 0 011223345788999999999999999999999999999999876443
No 146
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=7.3e-42 Score=353.45 Aligned_cols=282 Identities=44% Similarity=0.781 Sum_probs=235.0
Q ss_pred eeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEe
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEY 239 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey 239 (665)
|++.+.||.|++|.||+|.+..+++.+|+|.+............+.+|+.+|++++|+||+++++++.... .+|+||||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKG-DLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCC-CEEEEEec
Confidence 67889999999999999999999999999998765544445567889999999999999999999988764 78999999
Q ss_pred ccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccc
Q 006004 240 MEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSR 319 (665)
Q Consensus 240 ~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~ 319 (665)
+.+++...+......+++.++..++.||+.||.|||+.||+|+||||+|||++.++.+||+|||.+....... ......
T Consensus 80 ~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~~~~~~ 158 (283)
T cd05118 80 MDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-RPYTHY 158 (283)
T ss_pred cCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-ccccCc
Confidence 9998888777665689999999999999999999999999999999999999999999999999998775443 223345
Q ss_pred cccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccC-CCCC
Q 006004 320 VVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATS-FKPQ 398 (665)
Q Consensus 320 ~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~-~~~~ 398 (665)
.++..|+|||.+.+...++.++|+|||||++|+|++|++||.+.+..+.+.++...++.+....|.......... +...
T Consensus 159 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd05118 159 VVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFP 238 (283)
T ss_pred cCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhc
Confidence 688999999998875578999999999999999999999999999999999999988888877776543211000 0000
Q ss_pred CcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 399 QPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 399 ~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.............++..+.+||.+||..||.+||++.++|.||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 239 KKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred cccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 000111123345688999999999999999999999999999997
No 147
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2e-41 Score=345.64 Aligned_cols=255 Identities=24% Similarity=0.408 Sum_probs=213.1
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
.|++++.||+|++|.||++++..+++.||+|++..........+.+.+|++++++++|+||+++++.+...+..+|+|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 48999999999999999999999999999999976555555566788999999999999999999988755557899999
Q ss_pred eccccchh-hhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 239 YMEHDLAG-LATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 239 y~~g~ll~-~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|+.++.+. .+.. ....+++.+++.++.||+.||.+||++||+|+||||+|||++.++.++|+|||++..+.... ...
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~-~~~ 159 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC-DMA 159 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccC-Ccc
Confidence 99875444 4433 23468999999999999999999999999999999999999999999999999998764322 223
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFK 396 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~ 396 (665)
....+++.|+|||++.+ ..++.++|+|||||++|+|++|+.||.+.+.......+.... .
T Consensus 160 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~--~----------------- 219 (257)
T cd08223 160 STLIGTPYYMSPELFSN-KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGK--L----------------- 219 (257)
T ss_pred ccccCCcCccChhHhcC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcC--C-----------------
Confidence 44578999999999876 568899999999999999999999998877655544443210 0
Q ss_pred CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 397 PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 397 ~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
......+++.+.+||.+||+.||.+|||+.++|+||||
T Consensus 220 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 220 ---------PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred ---------CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 00113578899999999999999999999999999997
No 148
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=8.1e-42 Score=366.76 Aligned_cols=288 Identities=36% Similarity=0.632 Sum_probs=236.4
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCC-----
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSG----- 231 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~----- 231 (665)
.++|++.+.||+|+||.||+|++..+++.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ 93 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence 357999999999999999999999999999999986543334455667889999999999999999998765432
Q ss_pred cEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 232 SLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
.+|+|+||+.+++...+.. ..+++.++..++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++......
T Consensus 94 ~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~ 171 (343)
T cd07851 94 DVYLVTHLMGADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE 171 (343)
T ss_pred cEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc
Confidence 4899999998777666554 36999999999999999999999999999999999999999999999999999876432
Q ss_pred CCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 312 QNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 312 ~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
.....++..|+|||++.+...++.++|||||||++|+|++|++||.+.+..+.+..+...++.+++.+|.+.....
T Consensus 172 ----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07851 172 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSES 247 (343)
T ss_pred ----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchh
Confidence 3445789999999998765578899999999999999999999999999999999999999988888776543322
Q ss_pred ccCCCCCCcc--hhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCCCC
Q 006004 392 ATSFKPQQPY--KRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPLPC 450 (665)
Q Consensus 392 ~~~~~~~~p~--~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~~~ 450 (665)
...+....+. .......+..+++.+.+||.+||..||.+|||+.++|+||||.....+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~ 308 (343)
T cd07851 248 ARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPE 308 (343)
T ss_pred HHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCc
Confidence 2111110010 0112233456789999999999999999999999999999998765544
No 149
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=5.6e-42 Score=366.90 Aligned_cols=284 Identities=26% Similarity=0.367 Sum_probs=213.6
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
.++|++.++||+|+||.||++++..++..+|+|++.... .......+.+|+++|+.++||||++++++|.... .+|+|
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv 81 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-EISIC 81 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECC-EEEEE
Confidence 358999999999999999999999999999999987543 3445567889999999999999999999998754 89999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhC-CccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSR-GILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~-gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
|||+.++.+..+......+++..+..++.||+.||.|||+. +|+|+||||+|||++.++.+||+|||++..+....
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--- 158 (333)
T cd06650 82 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--- 158 (333)
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc---
Confidence 99998766655544455789999999999999999999975 79999999999999999999999999997653321
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHH-hcCCCChhHHhhhcccccc-
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFK-LCGSPSEDYWRKSKSAHAT- 393 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~-~~g~p~~~~~~~~~~~~~~- 393 (665)
.....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||......+....+.. ..+.+..............
T Consensus 159 ~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (333)
T cd06650 159 ANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRP 237 (333)
T ss_pred cccCCCCccccCHHHhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccch
Confidence 234578999999999976 5689999999999999999999999987655333221110 0111111000000000000
Q ss_pred --CCCC-CCcch---hh----hh-----hhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 394 --SFKP-QQPYK---RK----VL-----ETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 394 --~~~~-~~p~~---~~----~~-----~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
.+.+ ..|.. .. .. .....++.++++||.+||.+||.+|||+.++|.||||+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 238 LSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred hhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 0000 00000 00 00 0011367889999999999999999999999999999864
No 150
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.9e-41 Score=363.83 Aligned_cols=283 Identities=34% Similarity=0.609 Sum_probs=230.5
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC-----Cc
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS-----GS 232 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~-----~~ 232 (665)
++|.+.+.||+|+||.||+|++..+|+.||||++............+.+|+.+++.++||||+++++++.... ..
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 4799999999999999999999999999999998754333333456789999999999999999999886532 24
Q ss_pred EEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC
Q 006004 233 LYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~ 312 (665)
+|+||||+..++.... +..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 95 ~~lv~e~~~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~- 170 (342)
T cd07879 95 FYLVMPYMQTDLQKIM---GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE- 170 (342)
T ss_pred EEEEecccccCHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC-
Confidence 6999999987654433 236899999999999999999999999999999999999999999999999998765322
Q ss_pred CCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc
Q 006004 313 NLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA 392 (665)
Q Consensus 313 ~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~ 392 (665)
.....+|+.|+|||++.+...++.++|||||||++|+|++|+.||.+.+....+..+....+.+...+++.......
T Consensus 171 ---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (342)
T cd07879 171 ---MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAA 247 (342)
T ss_pred ---CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccch
Confidence 23457799999999987655689999999999999999999999999998889999999888888877665432221
Q ss_pred cCCCCCCc--chhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCC
Q 006004 393 TSFKPQQP--YKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEP 447 (665)
Q Consensus 393 ~~~~~~~p--~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~ 447 (665)
..+....+ ....+...++.+++.+.+||.+||+.||.+|||+.++|.||||....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 248 KSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 11110000 01122333456788999999999999999999999999999998754
No 151
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.1e-41 Score=356.01 Aligned_cols=259 Identities=27% Similarity=0.409 Sum_probs=208.7
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCC-HHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMD-PESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~-~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
+|++.+.||+|+||.||++.+..+++.||+|.+...... ......+.+|+.++++++|+||+.+++.+...+ .+|+||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-~~~lv~ 79 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKD-ALCLVL 79 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCC-EEEEEE
Confidence 488899999999999999999999999999998754332 233455678999999999999999999988765 799999
Q ss_pred Eeccccchhhhc-C-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 238 EYMEHDLAGLAT-T-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 238 Ey~~g~ll~~~~-~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||+.++.+.... . ....+++.++..++.||+.||.|||+.||+||||||+|||++.++.++|+|||++....... .
T Consensus 80 e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--~ 157 (285)
T cd05630 80 TLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ--T 157 (285)
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc--c
Confidence 999875554333 2 23468999999999999999999999999999999999999999999999999997654322 2
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
.....||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.........+........
T Consensus 158 ~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~--------------- 221 (285)
T cd05630 158 IKGRVGTVGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ--------------- 221 (285)
T ss_pred ccCCCCCccccChHHHcC-CCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhh---------------
Confidence 234578999999999976 5689999999999999999999999987543211111111100000
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC-----HHHHHhCcCCCCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS-----AASALRSEFFKTE 446 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT-----a~eaL~Hp~f~~~ 446 (665)
......+++++.+||.+||+.||.+|+| +.++++||||+..
T Consensus 222 ----------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 222 ----------EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred ----------hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 0112357889999999999999999999 9999999999863
No 152
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.1e-41 Score=351.80 Aligned_cols=282 Identities=43% Similarity=0.760 Sum_probs=235.1
Q ss_pred eeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEe
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEY 239 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey 239 (665)
|++.+.||+|+||.||+|++..+++.||+|++............+.+|+.++++++|+||+++++++.... .+|+||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTER-KLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCC-ceEEEecC
Confidence 67788999999999999999999999999999865433344456778999999999999999999988764 79999999
Q ss_pred ccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccc
Q 006004 240 MEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSR 319 (665)
Q Consensus 240 ~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~ 319 (665)
+.+++...+......+++.++..++.||+.||.|||++||+|+||+|+||++++++.+||+|||++........ .....
T Consensus 80 ~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-~~~~~ 158 (282)
T cd07829 80 CDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-TYTHE 158 (282)
T ss_pred cCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc-ccCcc
Confidence 99887777766545799999999999999999999999999999999999999999999999999987643322 23344
Q ss_pred cccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCC
Q 006004 320 VVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQ 399 (665)
Q Consensus 320 ~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~ 399 (665)
.++..|+|||.+.+...++.++|+|||||++|+|++|.+||.+.+..+.+.++...++.+.+..|...............
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (282)
T cd07829 159 VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPK 238 (282)
T ss_pred ccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccc
Confidence 56889999999876557899999999999999999999999999999999999999999998888765433211110001
Q ss_pred cchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 400 PYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 400 p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.........++.++..+.+||.+||..||.+||++.+++.||||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 239 FPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred cCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 11112234455678999999999999999999999999999998
No 153
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=7.6e-42 Score=364.82 Aligned_cols=252 Identities=25% Similarity=0.409 Sum_probs=205.3
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcEEEEEEecc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSLYLVFEYME 241 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l~lV~Ey~~ 241 (665)
+.||+|+||.||+|++..+++.||+|+++.... ..+....+.+|+.++.++ .||||+++++++.... .+|+||||+.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-~~~lv~e~~~ 79 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTS-RLFLVIEYVN 79 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCC-EEEEEEeCCC
Confidence 369999999999999999999999999986533 334566788999999998 6999999999988765 7999999999
Q ss_pred ccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccccc
Q 006004 242 HDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVV 321 (665)
Q Consensus 242 g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~g 321 (665)
++.+.........+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ......+|
T Consensus 80 ~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~g 158 (327)
T cd05617 80 GGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG-DTTSTFCG 158 (327)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCC-CceecccC
Confidence 86665555455579999999999999999999999999999999999999999999999999987532211 22345679
Q ss_pred cccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCCh------HHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 322 TLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTE------VEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 322 T~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~------~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
|+.|+|||++.+ ..++.++|||||||+||+|++|..||..... .+.+..+... .
T Consensus 159 t~~y~aPE~~~~-~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--~----------------- 218 (327)
T cd05617 159 TPNYIAPEILRG-EEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE--K----------------- 218 (327)
T ss_pred CcccCCHHHHCC-CCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh--C-----------------
Confidence 999999999986 6789999999999999999999999964321 1112211110 0
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC------HHHHHhCcCCCCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS------AASALRSEFFKTE 446 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT------a~eaL~Hp~f~~~ 446 (665)
.......++..+.+||.+||.+||.+|++ ..++++||||...
T Consensus 219 ---------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 219 ---------PIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred ---------CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 00112357889999999999999999998 5799999999864
No 154
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.2e-41 Score=383.94 Aligned_cols=259 Identities=25% Similarity=0.338 Sum_probs=217.2
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC-------
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS------- 230 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~------- 230 (665)
++|++.+.||+|+||+||+|++..+|+.||||++............+.+|+.+|..++|+||++++..+....
T Consensus 32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~ 111 (496)
T PTZ00283 32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV 111 (496)
T ss_pred CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence 4799999999999999999999999999999999877666666777889999999999999999988775432
Q ss_pred CcEEEEEEeccccch-hhhcC---CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccce
Q 006004 231 GSLYLVFEYMEHDLA-GLATT---PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLAT 306 (665)
Q Consensus 231 ~~l~lV~Ey~~g~ll-~~~~~---~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~ 306 (665)
..+++||||+.++.+ ..+.. ....+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++
T Consensus 112 ~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~ 191 (496)
T PTZ00283 112 LMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSK 191 (496)
T ss_pred eEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCe
Confidence 137899999986544 43332 23469999999999999999999999999999999999999999999999999998
Q ss_pred ecCCCCC-CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHh
Q 006004 307 TYDPSQN-LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWR 385 (665)
Q Consensus 307 ~~~~~~~-~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~ 385 (665)
.+..... ......+||+.|+|||++.+ ..|+.++|||||||+||+|++|+.||.+.+..+.+.++......
T Consensus 192 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~------- 263 (496)
T PTZ00283 192 MYAATVSDDVGRTFCGTPYYVAPEIWRR-KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYD------- 263 (496)
T ss_pred eccccccccccccccCCcceeCHHHhCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCC-------
Confidence 7643221 12345679999999999986 56899999999999999999999999988876666665431100
Q ss_pred hhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCC
Q 006004 386 KSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKT 445 (665)
Q Consensus 386 ~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~ 445 (665)
.....+++++.+||.+||..||.+||++.++|+|||++.
T Consensus 264 ---------------------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 264 ---------------------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred ---------------------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 112367899999999999999999999999999999874
No 155
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=2.5e-41 Score=353.00 Aligned_cols=259 Identities=26% Similarity=0.424 Sum_probs=213.1
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCC-HHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMD-PESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~-~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
.|+..+.||+|+||+||++.+..+++.||+|.+...... ......+.+|+.+|+.++|+||+.+++++...+ .+|+||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-~~~lv~ 79 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKD-ALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCC-EEEEEE
Confidence 378899999999999999999999999999998765432 223445778999999999999999999888765 789999
Q ss_pred Eeccccchh-hhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 238 EYMEHDLAG-LATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 238 Ey~~g~ll~-~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||+.+..+. .+.. ....+++..+..++.||+.||.|||+.||+||||||+|||+++++.+||+|||++....... .
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~--~ 157 (285)
T cd05632 80 TIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE--S 157 (285)
T ss_pred EeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC--c
Confidence 999976554 3332 23469999999999999999999999999999999999999999999999999997654322 2
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
.....|++.|+|||++.+ ..++.++|+|||||++|+|++|..||.+.........+.........
T Consensus 158 ~~~~~g~~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~-------------- 222 (285)
T cd05632 158 IRGRVGTVGYMAPEVLNN-QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEE-------------- 222 (285)
T ss_pred ccCCCCCcCccChHHhcC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccc--------------
Confidence 244578999999999976 56899999999999999999999999987765555544332111100
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC-----HHHHHhCcCCCCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS-----AASALRSEFFKTE 446 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT-----a~eaL~Hp~f~~~ 446 (665)
.....++..+.+||.+||..||.+||| +.+++.|+||...
T Consensus 223 -----------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 223 -----------VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred -----------ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 112357888999999999999999999 8999999999875
No 156
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-45 Score=365.21 Aligned_cols=256 Identities=27% Similarity=0.486 Sum_probs=218.3
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
-|.++.+||+|+||.||+|.++++|..+|||.+... ..++.+..||.||++++.|++|++|+.|.... .+|||||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~s-DLWIVME 108 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHS-DLWIVME 108 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhccCC-ceEeehh
Confidence 488899999999999999999999999999999754 34677889999999999999999999877655 7999999
Q ss_pred eccc-cchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 239 YMEH-DLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 239 y~~g-~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
||.. ...+.+..++++|+|.++..+++..+.||+|||...-||||||..||||+.+|..||+|||.|-.+..... ...
T Consensus 109 YCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMA-KRN 187 (502)
T KOG0574|consen 109 YCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMA-KRN 187 (502)
T ss_pred hcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHH-hhC
Confidence 9985 45556666788999999999999999999999999999999999999999999999999999987654322 235
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKP 397 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~ 397 (665)
+.+|||.|||||++.. ..|+..+||||||++..||..|+|||...-+ +..|+-+-..|++.|
T Consensus 188 TVIGTPFWMAPEVI~E-IGY~~~ADIWSLGITaIEMAEG~PPYsDIHP---MRAIFMIPT~PPPTF-------------- 249 (502)
T KOG0574|consen 188 TVIGTPFWMAPEVIEE-IGYDTKADIWSLGITAIEMAEGRPPYSDIHP---MRAIFMIPTKPPPTF-------------- 249 (502)
T ss_pred ccccCcccccHHHHHH-hccchhhhHhhhcchhhhhhcCCCCcccccc---cceeEeccCCCCCCC--------------
Confidence 6799999999999986 6799999999999999999999999976433 344444333333322
Q ss_pred CCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCC
Q 006004 398 QQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEP 447 (665)
Q Consensus 398 ~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~ 447 (665)
......+.++.|||++||.+.|++|-||.++++|||.++.+
T Consensus 250 ---------~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~ 290 (502)
T KOG0574|consen 250 ---------KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAP 290 (502)
T ss_pred ---------CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCC
Confidence 11235788999999999999999999999999999999864
No 157
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.1e-41 Score=354.30 Aligned_cols=255 Identities=25% Similarity=0.385 Sum_probs=201.3
Q ss_pred eeccCceEEEEEEECCCCcEEEEEEEecCCCCH-HHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEeccccc
Q 006004 166 IGQGTYSSVYKARDLETGKIVALKKVRFANMDP-ESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEHDL 244 (665)
Q Consensus 166 LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~-~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g~l 244 (665)
||+|+||.||+++++.+|+.||+|.+....... .....+..|++++++++||||+++++++.... .+|+||||+.|+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~-~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKT-HLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCC-eEEEEEecCCCCC
Confidence 799999999999999999999999987543321 22334567999999999999999999988754 7999999998765
Q ss_pred hh-hhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccccccc
Q 006004 245 AG-LATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVVT 322 (665)
Q Consensus 245 l~-~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~gT 322 (665)
+. .+.. ....+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||++..+.... ......||
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~~ 157 (277)
T cd05607 80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TITQRAGT 157 (277)
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eeeccCCC
Confidence 54 3322 23358999999999999999999999999999999999999999999999999998764322 22345789
Q ss_pred ccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcch
Q 006004 323 LWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYK 402 (665)
Q Consensus 323 ~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~ 402 (665)
+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.........+....-. .
T Consensus 158 ~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~--------------~--------- 213 (277)
T cd05607 158 NGYMAPEILKE-EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLE--------------D--------- 213 (277)
T ss_pred CCccCHHHHcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhc--------------c---------
Confidence 99999999986 45899999999999999999999999765432211111110000 0
Q ss_pred hhhhhhccCCcHHHHHHHHHhcccCcCCCcCH----HHHHhCcCCCCCCC
Q 006004 403 RKVLETFRNFPQSALALVDKLLTIEPENRGSA----ASALRSEFFKTEPL 448 (665)
Q Consensus 403 ~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa----~eaL~Hp~f~~~~~ 448 (665)
........+++++.+||.+||++||.+||++ .+++.||||+...+
T Consensus 214 -~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~ 262 (277)
T cd05607 214 -EVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINF 262 (277)
T ss_pred -ccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCH
Confidence 0000113578999999999999999999999 77889999987543
No 158
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.7e-41 Score=379.52 Aligned_cols=257 Identities=26% Similarity=0.380 Sum_probs=214.2
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCC-CcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLET-GKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~-g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~l 235 (665)
...|.+.+.||+|+||.||+|.+..+ +..||+|.+... .......+.+|+.+|+.++|||||++++++.... .+||
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~-~~~l 142 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKSDD-KLLL 142 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECC-EEEE
Confidence 34599999999999999999998887 788999977543 2344456788999999999999999999998764 8999
Q ss_pred EEEeccccchhh-hc---CCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 236 VFEYMEHDLAGL-AT---TPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 236 V~Ey~~g~ll~~-~~---~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
||||+.++.+.. +. ....++++.++..++.||+.||.|||++||+||||||+||||+.++.+||+|||++..+...
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 999998755433 22 23457999999999999999999999999999999999999999999999999999876543
Q ss_pred CC-CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccc
Q 006004 312 QN-LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSA 390 (665)
Q Consensus 312 ~~-~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~ 390 (665)
.. ......+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+......
T Consensus 223 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~------------ 289 (478)
T PTZ00267 223 VSLDVASSFCGTPYYLAPELWER-KRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD------------ 289 (478)
T ss_pred cccccccccCCCccccCHhHhCC-CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC------------
Confidence 22 12345579999999999876 67899999999999999999999999988877766665431100
Q ss_pred cccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCC
Q 006004 391 HATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKT 445 (665)
Q Consensus 391 ~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~ 445 (665)
.....+++++.+||.+||..||.+|||+.++|.|+|++.
T Consensus 290 ----------------~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 290 ----------------PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred ----------------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 011257889999999999999999999999999999864
No 159
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=4e-41 Score=355.69 Aligned_cols=263 Identities=30% Similarity=0.402 Sum_probs=217.5
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCH-HHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDP-ESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~-~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
+|++.+.||+|+||.||+|.+..+++.||||.+....... ...+.+.+|+++++.++||||+++++++.... .+|+||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~lv~ 80 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTET-YLCLVM 80 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCC-EEEEEE
Confidence 6999999999999999999999999999999997654432 35567889999999999999999999987754 789999
Q ss_pred EeccccchhhhcC--CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC--
Q 006004 238 EYMEHDLAGLATT--PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN-- 313 (665)
Q Consensus 238 Ey~~g~ll~~~~~--~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~-- 313 (665)
||+.++.+..+.. .+..+++..++.++.||+.||.|||++||+|+||||+||||+.++.++|+|||++........
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 9998755544433 235799999999999999999999999999999999999999999999999999876532211
Q ss_pred --------------------------CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHH
Q 006004 314 --------------------------LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVE 367 (665)
Q Consensus 314 --------------------------~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e 367 (665)
......+||..|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~ 239 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISG-DGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE 239 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcC-CCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH
Confidence 01123468999999999986 567999999999999999999999999888776
Q ss_pred HHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC----HHHHHhCcCC
Q 006004 368 QMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS----AASALRSEFF 443 (665)
Q Consensus 368 ~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT----a~eaL~Hp~f 443 (665)
.+..+...... . .....+++.+.+||.+||..||++||| +.++|+||||
T Consensus 240 ~~~~~~~~~~~--------------------~-------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~ 292 (316)
T cd05574 240 TFSNILKKEVT--------------------F-------PGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFF 292 (316)
T ss_pred HHHHHhcCCcc--------------------C-------CCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchh
Confidence 66655321000 0 001137889999999999999999999 9999999999
Q ss_pred CCCCCCC
Q 006004 444 KTEPLPC 450 (665)
Q Consensus 444 ~~~~~~~ 450 (665)
+...++.
T Consensus 293 ~~~~~~~ 299 (316)
T cd05574 293 RGVNWAL 299 (316)
T ss_pred hcCChhh
Confidence 9876654
No 160
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.5e-41 Score=362.85 Aligned_cols=253 Identities=25% Similarity=0.412 Sum_probs=199.9
Q ss_pred CCeeEEEEeeccCceEEEEEEEC-----CCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCC
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDL-----ETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSG 231 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~-----~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~ 231 (665)
++|++.+.||+|+||.||+|.+. .+++.||||+++... .......+.+|+.+|+.+ +||||+++++++....+
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA-TASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc-chHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 57999999999999999999852 445789999987432 334456788999999999 89999999998876666
Q ss_pred cEEEEEEeccccchh-hhcCC-----------------------------------------------------------
Q 006004 232 SLYLVFEYMEHDLAG-LATTP----------------------------------------------------------- 251 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~-~~~~~----------------------------------------------------------- 251 (665)
.+|+||||+.++.+. .+...
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 789999999975443 33211
Q ss_pred --CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC-CCcccccccccccCc
Q 006004 252 --GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN-LPLTSRVVTLWYRAP 328 (665)
Q Consensus 252 --~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~-~~~~~~~gT~~Y~AP 328 (665)
...+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.+..... .......+++.|+||
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP 245 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAP 245 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCc
Confidence 12478889999999999999999999999999999999999999999999999986533221 112233457889999
Q ss_pred ccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhh
Q 006004 329 ELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLE 407 (665)
Q Consensus 329 E~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 407 (665)
|++.+ ..++.++|||||||+||||++ |.+||.+....+.+...... +.. ..
T Consensus 246 E~~~~-~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~-~~~--------------------------~~ 297 (338)
T cd05102 246 ESIFD-KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD-GTR--------------------------MR 297 (338)
T ss_pred HHhhc-CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc-CCC--------------------------CC
Confidence 99976 568999999999999999997 99999886644433332221 000 00
Q ss_pred hccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 408 TFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 408 ~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.....++.+.+||.+||..||.+|||+.++++
T Consensus 298 ~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 298 APENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 11356888999999999999999999999986
No 161
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-43 Score=377.84 Aligned_cols=255 Identities=29% Similarity=0.501 Sum_probs=224.2
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
.|.-++.||.|+||-||-|++..+.+.||||++..... ..+.++.+..|+.+|++|+|||+|.+.+||..+. ..||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~-TaWLVM 105 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH-TAWLVM 105 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccc-hHHHHH
Confidence 47778999999999999999999999999999987654 5677889999999999999999999999998765 789999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
|||-|+-.+++....++|-+.+|..|+.+.+.||.|||+.+.||||||..||||++.|.|||+|||.|....+ ..
T Consensus 106 EYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P-----An 180 (948)
T KOG0577|consen 106 EYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP-----AN 180 (948)
T ss_pred HHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCc-----hh
Confidence 9999977776666667899999999999999999999999999999999999999999999999999987654 46
Q ss_pred cccccccccCccccc--CCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 318 SRVVTLWYRAPELLL--GATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~--~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
+++|||.|||||+|+ ..+.|+-++|||||||+..||...+||+-..+..-.+.-|... .+|.-
T Consensus 181 sFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQN-esPtL-------------- 245 (948)
T KOG0577|consen 181 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-ESPTL-------------- 245 (948)
T ss_pred cccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhc-CCCCC--------------
Confidence 789999999999997 3468999999999999999999999999888877776666541 11100
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
.-..++..++.||..||.+-|.+|||++++|.|+|....
T Consensus 246 ------------qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~ 284 (948)
T KOG0577|consen 246 ------------QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRE 284 (948)
T ss_pred ------------CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccC
Confidence 013578889999999999999999999999999998754
No 162
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=4.8e-41 Score=361.22 Aligned_cols=285 Identities=35% Similarity=0.602 Sum_probs=228.8
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-----CCc
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-----SGS 232 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-----~~~ 232 (665)
++|++++.||+|+||.||++.+..+++.||+|++..........+.+.+|+.++++++||||+++++++... ...
T Consensus 17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (345)
T cd07877 17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 96 (345)
T ss_pred CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccccc
Confidence 589999999999999999999999999999999875433334455678899999999999999999988643 134
Q ss_pred EEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC
Q 006004 233 LYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~ 312 (665)
+|++++++.+++...+.. ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 97 ~~lv~~~~~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~- 173 (345)
T cd07877 97 VYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE- 173 (345)
T ss_pred EEEEehhcccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccccc-
Confidence 789999987766554433 35899999999999999999999999999999999999999999999999998865322
Q ss_pred CCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc
Q 006004 313 NLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA 392 (665)
Q Consensus 313 ~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~ 392 (665)
.....+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+....+..+....+.+....+........
T Consensus 174 ---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (345)
T cd07877 174 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 250 (345)
T ss_pred ---ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhH
Confidence 23457899999999987656789999999999999999999999999888888888888888877766544321111
Q ss_pred cCCC---CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCCC
Q 006004 393 TSFK---PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPLP 449 (665)
Q Consensus 393 ~~~~---~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~~ 449 (665)
..+. +..+ .......+...++.+.+||.+||..||.+|+|+.++|.||||.....+
T Consensus 251 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~ 309 (345)
T cd07877 251 RNYIQSLTQMP-KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 309 (345)
T ss_pred HHHHHHhcccC-CcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCC
Confidence 0000 0000 001112223568899999999999999999999999999999875443
No 163
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=7.7e-41 Score=357.12 Aligned_cols=288 Identities=36% Similarity=0.585 Sum_probs=231.1
Q ss_pred CeeEEEEeeccCceEEEEEEECCC--CcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeec---cCCc
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLET--GKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTS---RSGS 232 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~--g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~---~~~~ 232 (665)
+|++.+.||+|+||.||++++..+ +..||||++..........+.+.+|+.+++++ +||||+++++++.. ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 489999999999999999999888 89999999875432333455678899999999 59999999986432 2235
Q ss_pred EEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC
Q 006004 233 LYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~ 312 (665)
+|++|||+.++|...+.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+....
T Consensus 81 ~~~~~e~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~ 159 (332)
T cd07857 81 LYLYEELMEADLHQIIRS-GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENP 159 (332)
T ss_pred EEEEEecccCCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccccc
Confidence 799999999887766654 4479999999999999999999999999999999999999999999999999998764322
Q ss_pred C---CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcc
Q 006004 313 N---LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKS 389 (665)
Q Consensus 313 ~---~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~ 389 (665)
. .......||+.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+.+..+...+|.+..+.+.+...
T Consensus 160 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (332)
T cd07857 160 GENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGS 239 (332)
T ss_pred ccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhh
Confidence 1 1223457899999999887656789999999999999999999999999999999999999999888776655432
Q ss_pred ccccCCC---CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCC
Q 006004 390 AHATSFK---PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPL 448 (665)
Q Consensus 390 ~~~~~~~---~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~ 448 (665)
.....+. ...+ ...+.......+..+.+||.+||..||.+|||+.++|.||||..+..
T Consensus 240 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~ 300 (332)
T cd07857 240 PKAQNYIRSLPNIP-KKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHD 300 (332)
T ss_pred hhHHHHHHhccccC-CcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcC
Confidence 2111000 0000 01122233456889999999999999999999999999999976543
No 164
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=3.4e-41 Score=360.37 Aligned_cols=289 Identities=37% Similarity=0.627 Sum_probs=233.8
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeecc-CCcE
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSR-SGSL 233 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~-~~~l 233 (665)
..++|++.+.||+|+||.||+|.+..+++.||||++............+.+|+.+++++ +||||+++++++... ...+
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 34579999999999999999999999999999998864433334455677899999999 999999999988654 3368
Q ss_pred EEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC
Q 006004 234 YLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 234 ~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~ 313 (665)
|+||||+.+++...+... .+++..++.++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++..+.....
T Consensus 85 ~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~ 162 (337)
T cd07852 85 YLVFEYMETDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEE 162 (337)
T ss_pred EEEecccccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccc
Confidence 999999998776665443 689999999999999999999999999999999999999999999999999987643322
Q ss_pred ----CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcc
Q 006004 314 ----LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKS 389 (665)
Q Consensus 314 ----~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~ 389 (665)
.....+.||+.|+|||++.+...++.++|+|||||++|+|++|++||.+....+.+.++....+.+..+.|.....
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (337)
T cd07852 163 NPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKS 242 (337)
T ss_pred cccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHh
Confidence 1234457899999999987666788999999999999999999999999999999999988888877766554322
Q ss_pred ccccCCCC--CCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 390 AHATSFKP--QQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 390 ~~~~~~~~--~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
.....+.. ............+.++..+.+||.+||..||.+|||+.++|+||||...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~ 301 (337)
T cd07852 243 PFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF 301 (337)
T ss_pred hhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence 11111100 0011112233445689999999999999999999999999999999754
No 165
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=8.8e-41 Score=358.57 Aligned_cols=286 Identities=36% Similarity=0.600 Sum_probs=221.8
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC-------
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS------- 230 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~------- 230 (665)
.+|++.+.||.|+||.||+|++..+|+.||+|++..... ...+.+.+|+++++.++||||+++++++....
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV 82 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence 479999999999999999999999999999999875543 34566788999999999999999998766432
Q ss_pred ------CcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcC-CCcEEEEecc
Q 006004 231 ------GSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINN-AGVLKIGDFG 303 (665)
Q Consensus 231 ------~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~-~g~lKL~DFG 303 (665)
..+|+||||+.+++...+.. ..+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||
T Consensus 83 ~~~~~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg 160 (342)
T cd07854 83 GSLTELNSVYIVQEYMETDLANVLEQ--GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFG 160 (342)
T ss_pred ccccccceEEEEeecccccHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcc
Confidence 25789999999876655532 36899999999999999999999999999999999999984 5678999999
Q ss_pred cceecCCCCC--CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCh
Q 006004 304 LATTYDPSQN--LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSE 381 (665)
Q Consensus 304 lA~~~~~~~~--~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~ 381 (665)
++..+..... .......++..|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+.+..+.........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07854 161 LARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVRE 240 (342)
T ss_pred cceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 9986533211 11123367899999998876567889999999999999999999999999888887777665443333
Q ss_pred hHHhhhccccccCCC-CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCC
Q 006004 382 DYWRKSKSAHATSFK-PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEP 447 (665)
Q Consensus 382 ~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~ 447 (665)
+.+............ ...............++.++++||.+||..||.+|||+.++|.||||+...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~ 307 (342)
T cd07854 241 EDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYS 307 (342)
T ss_pred HHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccccc
Confidence 222211000000000 011111122233457889999999999999999999999999999998543
No 166
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=7e-41 Score=353.76 Aligned_cols=280 Identities=26% Similarity=0.340 Sum_probs=213.1
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++++.||+|+||.||++++..++..||+|.+.... .......+.+|++++++++||||+++++++.... .+|+||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDG-EISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC-EEEEEe
Confidence 36999999999999999999999999999999987532 3445566889999999999999999999998754 899999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHh-CCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHS-RGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~-~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
||+.++.+..+......+++..+..++.||+.||.|||+ .+|+|+||||+|||++.++.+||+|||++....... .
T Consensus 79 ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---~ 155 (308)
T cd06615 79 EHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---A 155 (308)
T ss_pred eccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccc---c
Confidence 999986666555555679999999999999999999997 599999999999999999999999999987653321 2
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFK 396 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~ 396 (665)
...++++.|+|||++.+ ..++.++|+|||||++|+|++|+.||...+.... ..++........ +............
T Consensus 156 ~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~ 231 (308)
T cd06615 156 NSFVGTRSYMSPERLQG-THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKEL-EAMFGRPVSEGE--AKESHRPVSGHPP 231 (308)
T ss_pred ccCCCCcCccChhHhcC-CCCCccchHHHHHHHHHHHHhCCCCCCCcchhhH-HHhhcCcccccc--ccCCcccccCCCC
Confidence 44578999999999876 5688999999999999999999999987664332 222221110000 0000000000000
Q ss_pred C---CCcchh----h-----hhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 397 P---QQPYKR----K-----VLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 397 ~---~~p~~~----~-----~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
. ..+... . .......++.++.+||.+||..||++|||+.++|+||||...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 232 DSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred CccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 0 000000 0 000012367889999999999999999999999999999864
No 167
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.4e-41 Score=394.91 Aligned_cols=262 Identities=27% Similarity=0.454 Sum_probs=214.4
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-CCcEE
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-SGSLY 234 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-~~~l~ 234 (665)
..++|++++.||+|+||+||+|++..++..||+|++............+..|+.+|++|+|||||+++++|... ...+|
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 34589999999999999999999999999999999987666666677789999999999999999999988654 45789
Q ss_pred EEEEeccccch-hhhcC---CCCCCChhHHHHHHHHHHHHHHHHHhC-------CccccCCCcccEEEcC----------
Q 006004 235 LVFEYMEHDLA-GLATT---PGIKFTEPQIKCYMQQLLRGLEHCHSR-------GILHRDIKGSNLLINN---------- 293 (665)
Q Consensus 235 lV~Ey~~g~ll-~~~~~---~~~~lse~~i~~i~~QIl~aL~~LH~~-------gIiHrDLKPeNILld~---------- 293 (665)
|||||+.++.+ ..+.. ....|++..++.|+.||+.||.|||.. +||||||||+||||+.
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 99999997544 44432 234799999999999999999999985 4999999999999964
Q ss_pred -------CCcEEEEecccceecCCCCCCCcccccccccccCcccccCC-cccCcccchhhhHHHHHHHHhCCCCCCCCCh
Q 006004 294 -------AGVLKIGDFGLATTYDPSQNLPLTSRVVTLWYRAPELLLGA-TKYGAAIDMWSAGCILAELFAGKPIMPGRTE 365 (665)
Q Consensus 294 -------~g~lKL~DFGlA~~~~~~~~~~~~~~~gT~~Y~APE~l~~~-~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~ 365 (665)
.+.+||+|||++..+.... .....+||+.|+|||++.+. ..++.++||||||||||+|++|..||...+.
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~ 248 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN 248 (1021)
T ss_pred cccccCCCCceEEccCCccccccccc--cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 2358999999998764322 23445799999999998643 4588999999999999999999999987766
Q ss_pred HHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCC
Q 006004 366 VEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKT 445 (665)
Q Consensus 366 ~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~ 445 (665)
..++..+.... + .. ....++.++.+||..||.+||.+|||+.|+|.|+||+.
T Consensus 249 ~~qli~~lk~~--p------------------~l--------pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~ 300 (1021)
T PTZ00266 249 FSQLISELKRG--P------------------DL--------PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKN 300 (1021)
T ss_pred HHHHHHHHhcC--C------------------CC--------CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhh
Confidence 65554433210 0 00 11246889999999999999999999999999999986
Q ss_pred CC
Q 006004 446 EP 447 (665)
Q Consensus 446 ~~ 447 (665)
..
T Consensus 301 i~ 302 (1021)
T PTZ00266 301 VG 302 (1021)
T ss_pred cC
Confidence 53
No 168
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.2e-40 Score=355.89 Aligned_cols=286 Identities=37% Similarity=0.609 Sum_probs=232.8
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEE
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~l 235 (665)
..++|++++.||.|+||.||+|.+..+++.||||++..........+.+.+|+.+++.++||||++++++|......+|+
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l 87 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF 87 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence 34689999999999999999999999999999999865433334456678899999999999999999998765557899
Q ss_pred EEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 236 VFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 236 V~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||||+.+++...+.. ..+++..+..++.||+.||.|||++||+|+||+|.|||++.++.+||+|||++......
T Consensus 88 v~e~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~---- 161 (328)
T cd07856 88 VTELLGTDLHRLLTS--RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ---- 161 (328)
T ss_pred EeehhccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCC----
Confidence 999998776655543 35889999999999999999999999999999999999999999999999998865322
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
.....+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+.......+.+.+|.++.+.+..........+
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (328)
T cd07856 162 MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRF 241 (328)
T ss_pred cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHH
Confidence 23456789999999887656789999999999999999999999999988888888888899988877654322111111
Q ss_pred CCCCc--chhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCC
Q 006004 396 KPQQP--YKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEP 447 (665)
Q Consensus 396 ~~~~p--~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~ 447 (665)
....+ ...........+++.+.+||.+||..||++|||+.++|.||||....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~ 295 (328)
T cd07856 242 VQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYH 295 (328)
T ss_pred HhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcccccc
Confidence 00000 01112233456889999999999999999999999999999997553
No 169
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.4e-40 Score=338.93 Aligned_cols=254 Identities=28% Similarity=0.423 Sum_probs=214.0
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+|++.+.||+|+||.||+|.+..+++.||+|.+............+.+|+.+++.++||||+++++++.... .+|+|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKG-KLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCC-EEEEEEE
Confidence 488999999999999999999999999999999876555666777889999999999999999999988754 7999999
Q ss_pred eccccchhh-hcCC-CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 239 YMEHDLAGL-ATTP-GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 239 y~~g~ll~~-~~~~-~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|+.+..+.. +... ...+++.++..++.||+.||.|||+.||+|+||||+|||++.++.++|+|||++..+..... ..
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~-~~ 158 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN-FA 158 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccc-hh
Confidence 998755443 3332 45789999999999999999999999999999999999999999999999999987654322 22
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFK 396 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~ 396 (665)
....+++.|+|||++.+ ..++.++|+|||||++|+|++|+.||...+..+...++......
T Consensus 159 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------------ 219 (256)
T cd08529 159 NTIVGTPYYLSPELCED-KPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFP------------------ 219 (256)
T ss_pred hccccCccccCHHHhcC-CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC------------------
Confidence 34468999999999886 56889999999999999999999999888766655554331100
Q ss_pred CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 397 PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 397 ~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.....++..+.++|.+||+.+|++||++.++++|||+
T Consensus 220 ----------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 220 ----------PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred ----------CCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 0112478889999999999999999999999999995
No 170
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.1e-40 Score=348.43 Aligned_cols=255 Identities=30% Similarity=0.447 Sum_probs=214.8
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
++|++.+.||+|+||.||++.+..+++.||+|++..... .......+.+|+++|++++||||+++++++.... .+|+|
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~v 79 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDS-NLYLV 79 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCC-eEEEE
Confidence 369999999999999999999999999999999875432 3345567889999999999999999999988754 79999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|||+.++.+..+......+++..+..++.||+.||.|||+.||+|+||+|.||||+.++.+||+|||++...... .
T Consensus 80 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~----~ 155 (290)
T cd05580 80 MEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR----T 155 (290)
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC----C
Confidence 999976555544444468999999999999999999999999999999999999999999999999999876443 2
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFK 396 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~ 396 (665)
....+++.|+|||.+.+ ..++.++||||||+++|+|++|..||...+..+....+... .+
T Consensus 156 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~----------------- 215 (290)
T cd05580 156 YTLCGTPEYLAPEIILS-KGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG--KV----------------- 215 (290)
T ss_pred CCCCCCccccChhhhcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--Cc-----------------
Confidence 34468999999999876 46789999999999999999999999887765555554321 00
Q ss_pred CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCc-----CHHHHHhCcCCCCCC
Q 006004 397 PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRG-----SAASALRSEFFKTEP 447 (665)
Q Consensus 397 ~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~Rp-----Ta~eaL~Hp~f~~~~ 447 (665)
.....++..+.+||.+||..||.+|+ +++++++||||....
T Consensus 216 ----------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 261 (290)
T cd05580 216 ----------RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID 261 (290)
T ss_pred ----------cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence 01134688999999999999999999 999999999998643
No 171
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.5e-40 Score=344.36 Aligned_cols=279 Identities=43% Similarity=0.716 Sum_probs=223.9
Q ss_pred eeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC---CCCCcceeeeeeeccCC----c
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKL---DHPNVMKLEGLVTSRSG----S 232 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L---~HpnIV~l~~~~~~~~~----~ 232 (665)
|++.+.||+|+||.||+|++..+++.||+|.++...........+.+|+.+++++ +||||+++++++..... .
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 7889999999999999999998999999999975443333344566788887776 59999999999886542 3
Q ss_pred EEEEEEeccccchhhhcCCC-CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 233 LYLVFEYMEHDLAGLATTPG-IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~~~-~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
+|++|||+.+++...+.... ..+++.+++.++.||+.||.|||+.||+|+||+|+|||++.++.+||+|||++..+...
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~ 160 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE 160 (287)
T ss_pred eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCC
Confidence 89999999987766554432 36899999999999999999999999999999999999999999999999999876433
Q ss_pred CCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 312 QNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 312 ~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
.. .....++..|+|||++.+ ..++.++|+|||||++|+|++|++||.+.+..+.+.++....+.+....|.......
T Consensus 161 ~~--~~~~~~~~~~~~PE~~~~-~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07838 161 MA--LTSVVVTLWYRAPEVLLQ-SSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLP 237 (287)
T ss_pred cc--cccccccccccChHHhcc-CCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccc
Confidence 22 234457899999999986 568999999999999999999999999999999999998877766655554322111
Q ss_pred ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 392 ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 392 ~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
...+.... ..........+++.+.+||.+||..||.+||++.++|+||||
T Consensus 238 ~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 238 RSSFPSYT--PRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred hhhccccc--ccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 11111111 111233334678899999999999999999999999999998
No 172
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=4.7e-41 Score=358.00 Aligned_cols=281 Identities=24% Similarity=0.342 Sum_probs=208.0
Q ss_pred EEEEeecc--CceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEe
Q 006004 162 KIDKIGQG--TYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEY 239 (665)
Q Consensus 162 ~~~~LG~G--~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey 239 (665)
+++.||+| +|++||+++++.+|+.||||++............+.+|+.+++.++||||+++++++...+ .+|+||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~-~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN-ELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECC-EEEEEEec
Confidence 56789999 7889999999999999999999876555566677889999999999999999999998765 78999999
Q ss_pred ccccchhhhcCC--CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC-C--
Q 006004 240 MEHDLAGLATTP--GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN-L-- 314 (665)
Q Consensus 240 ~~g~ll~~~~~~--~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~-~-- 314 (665)
++++.+..+... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+||+.+........ .
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV 160 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccc
Confidence 997655444322 34589999999999999999999999999999999999999999999999987654321110 0
Q ss_pred ---CcccccccccccCcccccCC-cccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCC----------
Q 006004 315 ---PLTSRVVTLWYRAPELLLGA-TKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPS---------- 380 (665)
Q Consensus 315 ---~~~~~~gT~~Y~APE~l~~~-~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~---------- 380 (665)
......++..|+|||++.+. ..|+.++|||||||++|+|++|+.||.............. +..+
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 238 (327)
T cd08227 161 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN--GTVPCLLDTTTIPA 238 (327)
T ss_pred cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhc--CCccccccccchhh
Confidence 01223567889999998753 4689999999999999999999999987655443333222 1111
Q ss_pred hhHHhhhccccc-----cCCC--CCCc--chhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCC
Q 006004 381 EDYWRKSKSAHA-----TSFK--PQQP--YKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKT 445 (665)
Q Consensus 381 ~~~~~~~~~~~~-----~~~~--~~~p--~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~ 445 (665)
++...+...... .... ...+ ...........+++.+.+||.+||.+||++|||+.++|+||||+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~ 312 (327)
T cd08227 239 EELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 312 (327)
T ss_pred hhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence 000000000000 0000 0000 000111123356889999999999999999999999999999975
No 173
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.5e-41 Score=347.59 Aligned_cols=260 Identities=25% Similarity=0.407 Sum_probs=211.6
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++++.||+|+||.||++++..+++.||+|.++.. ........+.+|+.++++++||||+++++++.... .+|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE-LDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEG-AVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc-cCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCC-eEEEEE
Confidence 3699999999999999999999999999999998754 23444567889999999999999999999888754 899999
Q ss_pred EeccccchhhhcCC---CCCCChhHHHHHHHHHHHHHHHHHh-CCccccCCCcccEEEcCCCcEEEEecccceecCCCCC
Q 006004 238 EYMEHDLAGLATTP---GIKFTEPQIKCYMQQLLRGLEHCHS-RGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 238 Ey~~g~ll~~~~~~---~~~lse~~i~~i~~QIl~aL~~LH~-~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~ 313 (665)
||+.+..+..+... ...+++..+..++.||+.||.|||. .||+|+||||+|||++.++.+||+|||++..+....
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 157 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL- 157 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc-
Confidence 99998666555443 2368999999999999999999997 599999999999999999999999999997653221
Q ss_pred CCcccccccccccCcccccCC-----cccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhc
Q 006004 314 LPLTSRVVTLWYRAPELLLGA-----TKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSK 388 (665)
Q Consensus 314 ~~~~~~~gT~~Y~APE~l~~~-----~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~ 388 (665)
.....+++.|+|||++.+. ..++.++|+|||||++|+|++|+.||...+.......+.........
T Consensus 158 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~------- 228 (286)
T cd06622 158 --AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPP------- 228 (286)
T ss_pred --cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCC-------
Confidence 2334678899999988542 23588999999999999999999999776544433333222111100
Q ss_pred cccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCC
Q 006004 389 SAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEP 447 (665)
Q Consensus 389 ~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~ 447 (665)
.....++.++.+||.+||..||.+||++.++++||||....
T Consensus 229 ------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~ 269 (286)
T cd06622 229 ------------------TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK 269 (286)
T ss_pred ------------------CCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence 11235789999999999999999999999999999998653
No 174
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.7e-40 Score=345.19 Aligned_cols=255 Identities=25% Similarity=0.369 Sum_probs=207.9
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+|++++.||+|+||.||+|++..+++.||+|.+.... ..+....+.+|+.++++++||||+++++++.... ..++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e 79 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI-TVELQKQIMSELEILYKCDSPYIIGFYGAFFVEN-RISICTE 79 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC-ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECC-EEEEEEe
Confidence 6899999999999999999999999999999987543 3445567889999999999999999999998765 7899999
Q ss_pred eccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccc
Q 006004 239 YMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTS 318 (665)
Q Consensus 239 y~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~ 318 (665)
|++++.+... ..+++..+..++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++..+.... ...
T Consensus 80 ~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~---~~~ 152 (279)
T cd06619 80 FMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI---AKT 152 (279)
T ss_pred cCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc---ccC
Confidence 9998776544 257899999999999999999999999999999999999999999999999998764332 244
Q ss_pred ccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHH---HHHHHHhcCCCChhHHhhhccccccCC
Q 006004 319 RVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQ---MHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 319 ~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~---l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
.++|..|+|||++.+ ..++.++|+|||||++|+|++|+.||......+. ...+....... .
T Consensus 153 ~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------------~ 216 (279)
T cd06619 153 YVGTNAYMAPERISG-EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDE---------------D 216 (279)
T ss_pred CCCChhhcCceeecC-CCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhcc---------------C
Confidence 578999999999986 5689999999999999999999999975332110 00111100000 0
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
.+. .....+++++.+||.+||..||.+||++.++|+||||...
T Consensus 217 ~~~--------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~ 259 (279)
T cd06619 217 PPV--------LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQY 259 (279)
T ss_pred CCC--------CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccc
Confidence 000 0112467889999999999999999999999999999754
No 175
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-42 Score=348.60 Aligned_cols=260 Identities=26% Similarity=0.379 Sum_probs=215.0
Q ss_pred eeEE-EEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcEEEEE
Q 006004 160 FEKI-DKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 160 y~~~-~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
|++. +.||+|+|+.|--|....+|..||||+|.+. ......++.||++++.++ .|+||++|+++|+++. .+||||
T Consensus 79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq--~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~-~FYLVf 155 (463)
T KOG0607|consen 79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ--PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT-RFYLVF 155 (463)
T ss_pred HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC--CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc-eEEEEE
Confidence 4433 5789999999999999999999999999765 334566788999999999 5999999999999876 799999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCC---cEEEEecccceecCCC---
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAG---VLKIGDFGLATTYDPS--- 311 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g---~lKL~DFGlA~~~~~~--- 311 (665)
|-|.|+.+-..++..+.|+|.++..+++.|+.||+|||.+||.||||||+|||..... -+|||||.|+.-+...
T Consensus 156 EKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~ 235 (463)
T KOG0607|consen 156 EKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDC 235 (463)
T ss_pred ecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCC
Confidence 9999865544444556899999999999999999999999999999999999997654 4899999998654221
Q ss_pred ---CCCCcccccccccccCccccc----CCcccCcccchhhhHHHHHHHHhCCCCCCCCCh---------------HHHH
Q 006004 312 ---QNLPLTSRVVTLWYRAPELLL----GATKYGAAIDMWSAGCILAELFAGKPIMPGRTE---------------VEQM 369 (665)
Q Consensus 312 ---~~~~~~~~~gT~~Y~APE~l~----~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~---------------~e~l 369 (665)
..-.+.+.+|+..|||||++. ....|+.+.|.||||||||.||+|++||.|.-. ....
T Consensus 236 spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LF 315 (463)
T KOG0607|consen 236 SPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLF 315 (463)
T ss_pred CCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHH
Confidence 122356679999999999874 346799999999999999999999999987522 2334
Q ss_pred HHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCC
Q 006004 370 HKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEP 447 (665)
Q Consensus 370 ~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~ 447 (665)
+.|......+++..| .++|.+++|||..||..|+..|.+|.++|+|||+....
T Consensus 316 esIQEGkYeFPdkdW-------------------------ahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~ 368 (463)
T KOG0607|consen 316 ESIQEGKYEFPDKDW-------------------------AHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCA 368 (463)
T ss_pred HHHhccCCcCChhhh-------------------------HHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccc
Confidence 455555455555544 47999999999999999999999999999999998643
No 176
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-42 Score=345.51 Aligned_cols=256 Identities=26% Similarity=0.337 Sum_probs=211.2
Q ss_pred CCCeeEE-EEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeecc---CC
Q 006004 157 ADAFEKI-DKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSR---SG 231 (665)
Q Consensus 157 ~~~y~~~-~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~---~~ 231 (665)
.++|.+- ++||-|-.|.|..|.++.||+.+|+|++... ....+|+++.-.. .|||||.++++|+.. ..
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-------PKARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 3567665 5789999999999999999999999998632 2246788887666 699999999998753 33
Q ss_pred cEEEEEEeccccchh-hhcCCC-CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcC---CCcEEEEecccce
Q 006004 232 SLYLVFEYMEHDLAG-LATTPG-IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINN---AGVLKIGDFGLAT 306 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~-~~~~~~-~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~---~g~lKL~DFGlA~ 306 (665)
.+.+|||+|+|+.+. .+..++ ..|+|.++..+++||+.|+.|||+.+|.||||||+|+|+.. +..+||+|||+|+
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK 212 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAK 212 (400)
T ss_pred eeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccccc
Confidence 688999999986554 444333 45999999999999999999999999999999999999975 4579999999998
Q ss_pred ecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCCh----HHHHHHHHHhcCCCChh
Q 006004 307 TYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTE----VEQMHKIFKLCGSPSED 382 (665)
Q Consensus 307 ~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~----~e~l~kI~~~~g~p~~~ 382 (665)
.... ...+.+.+.||.|.|||++-. ..|+...|+||+||++|.||+|.|||..... ...-.+|...-..++.+
T Consensus 213 ~t~~--~~~L~TPc~TPyYvaPevlg~-eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~p 289 (400)
T KOG0604|consen 213 ETQE--PGDLMTPCFTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEP 289 (400)
T ss_pred ccCC--CccccCCcccccccCHHHhCc-hhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCCh
Confidence 7543 345677789999999998865 6799999999999999999999999987653 23445565544445554
Q ss_pred HHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCC
Q 006004 383 YWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEP 447 (665)
Q Consensus 383 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~ 447 (665)
-| ..+|.+++|||+.||..+|.+|.|+.+++.|||+...+
T Consensus 290 EW-------------------------s~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~ 329 (400)
T KOG0604|consen 290 EW-------------------------SCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYE 329 (400)
T ss_pred hH-------------------------hHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccc
Confidence 44 36899999999999999999999999999999998653
No 177
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.5e-40 Score=340.21 Aligned_cols=261 Identities=26% Similarity=0.419 Sum_probs=214.6
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++.+.||.|+||+||+|.+..++..+|+|++....... ....+.+|+.+|+.++|+||+++++.+.... .+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVGD-ELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCC-EEEEEE
Confidence 46999999999999999999999999999999987654433 5677899999999999999999999887754 789999
Q ss_pred EeccccchhhhcCC---CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC
Q 006004 238 EYMEHDLAGLATTP---GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL 314 (665)
Q Consensus 238 Ey~~g~ll~~~~~~---~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~ 314 (665)
||+.++.+..+... ...+++..+..++.||+.||.|||+.||+|+||+|+||++++++.++|+|||++..+......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~ 158 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR 158 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc
Confidence 99987655544432 246899999999999999999999999999999999999999999999999999876543322
Q ss_pred ---CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 315 ---PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 315 ---~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
.....+++..|+|||++.....++.++|+|||||++|+|++|+.||...+....+.++... .+..
T Consensus 159 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~--------- 226 (267)
T cd06610 159 TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN---DPPS--------- 226 (267)
T ss_pred cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC---CCCC---------
Confidence 1233468999999999876447899999999999999999999999877665555544331 0000
Q ss_pred ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 392 ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 392 ~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
+. ....+..+++.+.+||.+||..||.+|||+.++|.||||
T Consensus 227 ---~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 227 ---LE--------TGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred ---cC--------CccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 00 001134678999999999999999999999999999998
No 178
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.2e-41 Score=378.62 Aligned_cols=284 Identities=24% Similarity=0.340 Sum_probs=208.8
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCC-cEEEEEEEe---------------cCCCCHHHHHHHHHHHHHHHhCCCCCcc
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETG-KIVALKKVR---------------FANMDPESVRFMAREIHILRKLDHPNVM 220 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g-~~vAiK~i~---------------~~~~~~~~~~~~~~Ei~iL~~L~HpnIV 220 (665)
.++|++++.||+|+||+||+|..+... ..+++|.+. ...........+.+|+.+|++|+|||||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 357999999999999999998865432 222222111 0111223445678999999999999999
Q ss_pred eeeeeeeccCCcEEEEEEeccccchhhhcCCC----CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCc
Q 006004 221 KLEGLVTSRSGSLYLVFEYMEHDLAGLATTPG----IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGV 296 (665)
Q Consensus 221 ~l~~~~~~~~~~l~lV~Ey~~g~ll~~~~~~~----~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~ 296 (665)
++++++.... ..|+|||++.++++..+.... ......+++.++.||+.||.|||++||+||||||+||||+.++.
T Consensus 227 ~l~~~~~~~~-~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 227 KIEEILRSEA-NTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGK 305 (501)
T ss_pred cEeEEEEECC-eeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC
Confidence 9999998765 789999999988777654322 23456778899999999999999999999999999999999999
Q ss_pred EEEEecccceecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCC-CCC--CChHHHHHHHH
Q 006004 297 LKIGDFGLATTYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPI-MPG--RTEVEQMHKIF 373 (665)
Q Consensus 297 lKL~DFGlA~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~p-F~g--~~~~e~l~kI~ 373 (665)
+||+|||++..+...........+||+.|+|||++.+ ..|+.++|||||||+||||++|..+ |.+ .....++.+++
T Consensus 306 vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~ 384 (501)
T PHA03210 306 IVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAG-DGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKII 384 (501)
T ss_pred EEEEeCCCceecCcccccccccccCCcCCCCchhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHH
Confidence 9999999998875443333345689999999999986 5789999999999999999998854 432 34556666666
Q ss_pred HhcCCCChhH-------HhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 374 KLCGSPSEDY-------WRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 374 ~~~g~p~~~~-------~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
..++.+..++ |+........... .....+. ....++.++.+||.+||.+||.+|||+.|+|.||||...
T Consensus 385 ~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~---~~~~~~~-~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 385 DSLSVCDEEFPDPPCKLFDYIDSAEIDHAG---HSVPPLI-RNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred HhcccChhhcCCcHHHHHHHhhhhhcccCc---cchhhHH-HhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence 6655443332 1111100000000 0000011 112478889999999999999999999999999999864
No 179
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2.2e-40 Score=343.24 Aligned_cols=258 Identities=28% Similarity=0.443 Sum_probs=205.8
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHH-HHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHI-LRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~i-L~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
++|++++.||+|+||.||++++..+|+.||||.++......... .+..|+.+ ++.++||||+++++++.... .+|+|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~iv~~~~~~~~~~-~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQK-RLLMDLDISMRSVDCPYTVTFYGALFREG-DVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHH-HHHHHHHHHHHHcCCCCeeeeeEEEecCC-cEEEE
Confidence 36999999999999999999999999999999997654333333 34556665 66679999999999987654 79999
Q ss_pred EEeccccchhhhc---CCCCCCChhHHHHHHHHHHHHHHHHHhC-CccccCCCcccEEEcCCCcEEEEecccceecCCCC
Q 006004 237 FEYMEHDLAGLAT---TPGIKFTEPQIKCYMQQLLRGLEHCHSR-GILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 237 ~Ey~~g~ll~~~~---~~~~~lse~~i~~i~~QIl~aL~~LH~~-gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~ 312 (665)
|||+++++...+. .....+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||++..+....
T Consensus 79 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~ 158 (283)
T cd06617 79 MEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV 158 (283)
T ss_pred hhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 9999987655443 2345799999999999999999999997 99999999999999999999999999998764322
Q ss_pred CCCcccccccccccCcccccCC---cccCcccchhhhHHHHHHHHhCCCCCCCC-ChHHHHHHHHHhcCCCChhHHhhhc
Q 006004 313 NLPLTSRVVTLWYRAPELLLGA---TKYGAAIDMWSAGCILAELFAGKPIMPGR-TEVEQMHKIFKLCGSPSEDYWRKSK 388 (665)
Q Consensus 313 ~~~~~~~~gT~~Y~APE~l~~~---~~~~~~sDIWSLG~iLyeLltG~~pF~g~-~~~e~l~kI~~~~g~p~~~~~~~~~ 388 (665)
..+...++..|+|||++.+. ..++.++|+|||||++|+|++|+.||... +..+.+..+.... .
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~--------- 225 (283)
T cd06617 159 --AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEP--S--------- 225 (283)
T ss_pred --ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcC--C---------
Confidence 12334688999999988642 34688999999999999999999999653 3334443332210 0
Q ss_pred cccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 389 SAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 389 ~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
+..+ ...+|.++.+||.+||..||.+|||+.+++.||||...
T Consensus 226 --------~~~~--------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 267 (283)
T cd06617 226 --------PQLP--------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELH 267 (283)
T ss_pred --------CCCC--------ccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhc
Confidence 0000 12478899999999999999999999999999999864
No 180
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.5e-40 Score=345.78 Aligned_cols=259 Identities=29% Similarity=0.429 Sum_probs=213.4
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
+.|+++++||+|+||.||++++..+++.||+|.+... .....+.+.+|+.+++.++||||+++++++.... .+|+||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~ 88 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDG-KLWIMI 88 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC-eEEEEE
Confidence 4699999999999999999999999999999998643 3455677889999999999999999999987754 799999
Q ss_pred Eeccccchhhh-cCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 238 EYMEHDLAGLA-TTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 238 Ey~~g~ll~~~-~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
||+.++.+..+ ......+++..+..++.||+.+|.|||+.||+||||||+|||++.++.+||+|||++...... ....
T Consensus 89 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~-~~~~ 167 (292)
T cd06644 89 EFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT-LQRR 167 (292)
T ss_pred ecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccc-cccc
Confidence 99998766543 344457999999999999999999999999999999999999999999999999998764322 1223
Q ss_pred ccccccccccCcccccC----CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc
Q 006004 317 TSRVVTLWYRAPELLLG----ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA 392 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~----~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~ 392 (665)
....+++.|+|||++.+ ...++.++|+|||||++|+|++|.+||...+....+.++.... + .
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~--~-~----------- 233 (292)
T cd06644 168 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE--P-P----------- 233 (292)
T ss_pred ceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCC--C-c-----------
Confidence 44568899999999853 2457889999999999999999999998876555444442210 0 0
Q ss_pred cCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 393 TSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 393 ~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
.......++.++.+||.+||..||++||++.++|+||||...
T Consensus 234 ------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 275 (292)
T cd06644 234 ------------TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSV 275 (292)
T ss_pred ------------cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 001123577889999999999999999999999999999764
No 181
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-42 Score=356.51 Aligned_cols=279 Identities=27% Similarity=0.466 Sum_probs=221.2
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCC--C----CcceeeeeeeccCC
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDH--P----NVMKLEGLVTSRSG 231 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~H--p----nIV~l~~~~~~~~~ 231 (665)
.+|++++.||+|+||.|-.|.+.+++..||||+++... ...+..+-||++|+++.+ | -+|++.++|.-+ +
T Consensus 89 ~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~---kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr-g 164 (415)
T KOG0671|consen 89 NRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD---KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR-G 164 (415)
T ss_pred cceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH---HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc-C
Confidence 47999999999999999999999999999999997432 223344569999999932 2 367787877764 4
Q ss_pred cEEEEEEeccccchhhhcCCC-CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcC-----------------
Q 006004 232 SLYLVFEYMEHDLAGLATTPG-IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINN----------------- 293 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~~~~-~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~----------------- 293 (665)
+.|||+|.++-++.+.+...+ .+|+..+++.+.+||++++++||+++++|-||||||||+.+
T Consensus 165 hiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r 244 (415)
T KOG0671|consen 165 HICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIR 244 (415)
T ss_pred ceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceec
Confidence 899999999888887777643 67999999999999999999999999999999999999943
Q ss_pred ---CCcEEEEecccceecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHH
Q 006004 294 ---AGVLKIGDFGLATTYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMH 370 (665)
Q Consensus 294 ---~g~lKL~DFGlA~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~ 370 (665)
+-.++|+|||.|++.... ..+.+.|..|+|||++++ -.++..+||||+||||+||.+|..+|++.++.|+++
T Consensus 245 ~~ks~~I~vIDFGsAtf~~e~----hs~iVsTRHYRAPEViLg-LGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLa 319 (415)
T KOG0671|consen 245 PLKSTAIKVIDFGSATFDHEH----HSTIVSTRHYRAPEVILG-LGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLA 319 (415)
T ss_pred cCCCcceEEEecCCcceeccC----cceeeeccccCCchheec-cCcCCccCceeeeeEEEEeeccceecccCCcHHHHH
Confidence 225899999999975433 356688999999999998 789999999999999999999999999999999999
Q ss_pred HHHHhcCCCChhHHhhh---------cccccc---------CCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCc
Q 006004 371 KIFKLCGSPSEDYWRKS---------KSAHAT---------SFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRG 432 (665)
Q Consensus 371 kI~~~~g~p~~~~~~~~---------~~~~~~---------~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~Rp 432 (665)
.+..++|.++.....+. ++.... .+.+-.|....... -..-...+.|||++||.+||.+|+
T Consensus 320 MMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~-~d~e~~~LfDLl~~mL~fDP~~Ri 398 (415)
T KOG0671|consen 320 MMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQ-DDLEHVQLFDLLRRMLEFDPARRI 398 (415)
T ss_pred HHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhcc-CcHHHhHHHHHHHHHHccCccccc
Confidence 99999998776554332 111111 11111111111100 001123478999999999999999
Q ss_pred CHHHHHhCcCCCCC
Q 006004 433 SAASALRSEFFKTE 446 (665)
Q Consensus 433 Ta~eaL~Hp~f~~~ 446 (665)
|+.|||.||||+..
T Consensus 399 Tl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 399 TLREALSHPFFARL 412 (415)
T ss_pred cHHHHhcCHHhhcC
Confidence 99999999999864
No 182
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.1e-40 Score=342.81 Aligned_cols=257 Identities=29% Similarity=0.459 Sum_probs=207.1
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++.+.||+|+||.||+|++..+++.||+|++..... .....+.+|+.++++++||||+++++++.... .+|+||
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~-~~~iv~ 85 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG--DDFSLIQQEIFMVKECKHCNIVAYFGSYLSRE-KLWICM 85 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc--chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC-EEEEEE
Confidence 479999999999999999999999999999999875432 23456788999999999999999999988754 789999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
||+.++.+..+......+++.++..++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++..+..... ...
T Consensus 86 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~-~~~ 164 (267)
T cd06646 86 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA-KRK 164 (267)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccccc-ccC
Confidence 9999866655444455799999999999999999999999999999999999999999999999999987643221 123
Q ss_pred cccccccccCcccccC--CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 318 SRVVTLWYRAPELLLG--ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~--~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
...+++.|+|||.+.. ...++.++|+|||||++|+|++|++||...+..+....+... .+
T Consensus 165 ~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~------------------~~ 226 (267)
T cd06646 165 SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS------------------NF 226 (267)
T ss_pred ccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecC------------------CC
Confidence 4568899999998852 345788999999999999999999999765543332222110 00
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEF 442 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~ 442 (665)
.+. .......++..+.+||.+||..||++|||++++|+|+|
T Consensus 227 ~~~------~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 227 QPP------KLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred CCC------CCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 000 00011257889999999999999999999999999987
No 183
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=3.4e-40 Score=347.52 Aligned_cols=262 Identities=29% Similarity=0.378 Sum_probs=213.7
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
++|++++.||+|+||.||++++..+++.||+|.+..... .......+.+|+++++.++||||+++++.+.... .+|+|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~lv 79 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKR-HLCMV 79 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCC-EEEEE
Confidence 369999999999999999999999999999999875533 2334566789999999999999999999988754 78999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC---
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN--- 313 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~--- 313 (665)
|||+.|+.+..+......+++..+..++.||+.||.|||++||+|+||||+|||++.++.+||+|||++........
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (305)
T cd05609 80 MEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNL 159 (305)
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccc
Confidence 99999866665555555799999999999999999999999999999999999999999999999999864211100
Q ss_pred -----------CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChh
Q 006004 314 -----------LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSED 382 (665)
Q Consensus 314 -----------~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~ 382 (665)
.......++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.+..+.+..+.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~--- 235 (305)
T cd05609 160 YEGHIEKDTREFLDKQVCGTPEYIAPEVILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEW--- 235 (305)
T ss_pred cccccccchhhccccCCccCccccCchhccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCC---
Confidence 01122457889999999876 568999999999999999999999999887666555543311000
Q ss_pred HHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC---HHHHHhCcCCCCCC
Q 006004 383 YWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS---AASALRSEFFKTEP 447 (665)
Q Consensus 383 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT---a~eaL~Hp~f~~~~ 447 (665)
+ .....++.++.+||.+||+.||++||+ +.++|+||||....
T Consensus 236 -----------------~------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~ 280 (305)
T cd05609 236 -----------------P------EGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLD 280 (305)
T ss_pred -----------------C------CccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCC
Confidence 0 001247888999999999999999998 89999999997643
No 184
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=3.9e-40 Score=341.37 Aligned_cols=279 Identities=38% Similarity=0.702 Sum_probs=228.3
Q ss_pred eeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCC-CCCcceeeeeeeccCCcEEEEEE
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLD-HPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
|++.+.||+|+||+||+|++..+++.||||.+.......+ .....+|+..+++++ ||||+++++++... ...|+|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~-~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWE-ECMNLREVKSLRKLNEHPNIVKLKEVFREN-DELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchh-HHHHHHHHHHHHhccCCCCchhHHHHhhcC-CcEEEEEe
Confidence 6788999999999999999998999999999865432222 223457999999999 99999999998874 47899999
Q ss_pred eccccchhhhcCCC-CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 239 YMEHDLAGLATTPG-IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 239 y~~g~ll~~~~~~~-~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
|+.+++...+.... ..+++.++..++.||+.+|.|||++||+|+||+|+|||++.++.++|+|||++....... ...
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~--~~~ 156 (283)
T cd07830 79 YMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP--PYT 156 (283)
T ss_pred cCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCC--CcC
Confidence 99888777666543 478999999999999999999999999999999999999999999999999998764322 234
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKP 397 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~ 397 (665)
...++..|+|||++.....++.++|+||||+++|+|++|++||++.+..+.+.++....+.+..+.|......... ...
T Consensus 157 ~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 235 (283)
T cd07830 157 DYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASK-LGF 235 (283)
T ss_pred CCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcc-ccc
Confidence 4578999999999876566899999999999999999999999999999999999999999887777653221111 100
Q ss_pred CCc--chhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 398 QQP--YKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 398 ~~p--~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
..+ ....+...+...+..+.+||.+||..||.+|||+.|++.||||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 236 RFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 001 0111223334557899999999999999999999999999998
No 185
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=3.3e-40 Score=338.99 Aligned_cols=255 Identities=30% Similarity=0.552 Sum_probs=209.6
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCC-------HHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCC
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMD-------PESVRFMAREIHILRKLDHPNVMKLEGLVTSRSG 231 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~-------~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ 231 (665)
+|.+...||+|+||.||+|.+..+++.||+|.+...... .+..+.+.+|+.++++++||||+++++++....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD- 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC-
Confidence 367788999999999999999999999999988654321 123456889999999999999999999987754
Q ss_pred cEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 232 SLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
.+++||||+.+..+..+......+++..+..++.||+.||.|||++|++|+||+|+|||+++++.+||+|||++..+...
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEAN 159 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccc
Confidence 78999999988666655555567999999999999999999999999999999999999999999999999999876422
Q ss_pred CC-----CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhh
Q 006004 312 QN-----LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRK 386 (665)
Q Consensus 312 ~~-----~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~ 386 (665)
.. .......|+..|+|||.+.+ ..++.++|+|||||++|+|++|+.||.+.+....+..+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---------- 228 (267)
T cd06628 160 SLSTKTNGARPSLQGSVFWMAPEVVKQ-TSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENA---------- 228 (267)
T ss_pred cccCCccccccccCCCcCccChhHhcc-CCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccC----------
Confidence 11 11123457899999999876 567899999999999999999999998876655444432210
Q ss_pred hccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 387 SKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 387 ~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.+ .....++..+.+||.+||+.||.+||++.++|+||||
T Consensus 229 ---------~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 229 ---------SP---------EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred ---------CC---------cCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 00 1113578899999999999999999999999999998
No 186
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1e-40 Score=346.01 Aligned_cols=259 Identities=28% Similarity=0.456 Sum_probs=214.1
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++++.||.|+||.||++.+..++..||+|.+... .......+.+|++++++++||||+++++++.... .+|+||
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~ 81 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFYEN-KLWILI 81 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCC-eEEEEe
Confidence 5799999999999999999999999999999998754 3445667889999999999999999999988754 789999
Q ss_pred Eeccccchhhhc-CCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 238 EYMEHDLAGLAT-TPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 238 Ey~~g~ll~~~~-~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
||++++.+..+. .....+++.+++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||++....... ...
T Consensus 82 e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~~~ 160 (280)
T cd06611 82 EFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL-QKR 160 (280)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccc-ccc
Confidence 999986665444 444579999999999999999999999999999999999999999999999999987653322 122
Q ss_pred ccccccccccCcccccC----CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc
Q 006004 317 TSRVVTLWYRAPELLLG----ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA 392 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~----~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~ 392 (665)
....+|+.|+|||++.. ...++.++|+|||||++|+|++|++||.+.+....+.++... .++
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~------------ 226 (280)
T cd06611 161 DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKS--EPP------------ 226 (280)
T ss_pred ceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcC--CCC------------
Confidence 34568999999999852 245788999999999999999999999887766555554321 000
Q ss_pred cCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 393 TSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 393 ~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
.......++.++.+||.+||..||.+||++.++|+||||...
T Consensus 227 ------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 227 ------------TLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred ------------CcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 001113578889999999999999999999999999999863
No 187
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2.2e-40 Score=344.13 Aligned_cols=258 Identities=27% Similarity=0.396 Sum_probs=213.1
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
-|++++.||+|+||.||++++..++..+|+|.+... .......+.+|+++++.++||||+++++++.... ..|+|||
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~-~~~~v~e 82 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN-NLWILIE 82 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC--CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCC-EEEEEEE
Confidence 378899999999999999999999999999998643 2445667889999999999999999999988755 7899999
Q ss_pred eccccchhhh-cCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 239 YMEHDLAGLA-TTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 239 y~~g~ll~~~-~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
|+.++.+..+ ......+++..+..++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++....... ....
T Consensus 83 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-~~~~ 161 (282)
T cd06643 83 FCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-QRRD 161 (282)
T ss_pred ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccc-cccc
Confidence 9998766543 3344579999999999999999999999999999999999999999999999999987653221 1233
Q ss_pred cccccccccCcccccC----CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccccc
Q 006004 318 SRVVTLWYRAPELLLG----ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHAT 393 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~----~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~ 393 (665)
...+++.|+|||++.. ...++.++|||||||++|+|++|.+||...+..+.+..+...... .
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~--~------------ 227 (282)
T cd06643 162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP--T------------ 227 (282)
T ss_pred cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCC--C------------
Confidence 4578999999999842 245788999999999999999999999988776665555331100 0
Q ss_pred CCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 394 SFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 394 ~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
......++..+.+||.+||..||.+|||+.++|+||||+..
T Consensus 228 ------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 228 ------------LAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred ------------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 00112478899999999999999999999999999999853
No 188
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1e-40 Score=343.10 Aligned_cols=257 Identities=28% Similarity=0.453 Sum_probs=207.8
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++.+.||+|+||.||+|++..+++.||+|+++... ......+.+|+.+++.++||||+++++++.... .+|+||
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~-~~~lv~ 85 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP--GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRD-KLWICM 85 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC-EEEEEE
Confidence 36999999999999999999999999999999987543 233455788999999999999999999988754 789999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
||++++.+..+......+++.++..++.||+.||.|||++||+|+||||+|||++.++.+||+|||++..+.... ....
T Consensus 86 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-~~~~ 164 (267)
T cd06645 86 EFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI-AKRK 164 (267)
T ss_pred eccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc-cccc
Confidence 999976555544445579999999999999999999999999999999999999999999999999987664322 2233
Q ss_pred cccccccccCccccc--CCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 318 SRVVTLWYRAPELLL--GATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~--~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
...|++.|+|||++. ....++.++|+|||||++|+|++|.+||........+..+.... ...
T Consensus 165 ~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~--~~~-------------- 228 (267)
T cd06645 165 SFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSN--FQP-------------- 228 (267)
T ss_pred cccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccC--CCC--------------
Confidence 457899999999874 23457899999999999999999999997665444333321110 000
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEF 442 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~ 442 (665)
+. ......++..+.+||.+||..||++|||+.++|+|||
T Consensus 229 -~~-------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 229 -PK-------LKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred -Cc-------ccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 00 0001246788999999999999999999999999998
No 189
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.7e-40 Score=341.69 Aligned_cols=257 Identities=28% Similarity=0.475 Sum_probs=213.8
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++.+.||.|+||.||+|++..+++.||+|.+.... .......+.+|+.+++.++|+||+++++++.... .+|+|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~v~ 78 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGS-KLWIIM 78 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECC-eEEEEE
Confidence 36899999999999999999999999999999987654 2344566789999999999999999999988764 799999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
||+.++.+..+.... ++++..++.++.||+.||.|||+.||+|+||+|+||++++++.++|+|||++..+..... ...
T Consensus 79 e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-~~~ 156 (274)
T cd06609 79 EYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS-KRN 156 (274)
T ss_pred EeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeeccccc-ccc
Confidence 999986555554444 799999999999999999999999999999999999999999999999999988754321 233
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKP 397 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~ 397 (665)
...+++.|+|||++.+ ..++.++|||||||++|+|++|.+||...+.......+.... .+
T Consensus 157 ~~~~~~~y~~PE~~~~-~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-------------------~~ 216 (274)
T cd06609 157 TFVGTPFWMAPEVIKQ-SGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN-------------------PP 216 (274)
T ss_pred cccCCccccChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC-------------------CC
Confidence 4578899999999986 458999999999999999999999998776554444332210 00
Q ss_pred CCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 398 QQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 398 ~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
..+ ...++.++.+||.+||..||++|||+.++++||||...
T Consensus 217 ~~~--------~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~ 257 (274)
T cd06609 217 SLE--------GNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKA 257 (274)
T ss_pred CCc--------ccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCC
Confidence 000 01278889999999999999999999999999999864
No 190
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.7e-40 Score=339.51 Aligned_cols=257 Identities=29% Similarity=0.498 Sum_probs=207.8
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC---CHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-CCcEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM---DPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-SGSLY 234 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~---~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-~~~l~ 234 (665)
+|+..+.||+|+||.||+|.+..++..||+|++..... .......+.+|+.++++++||||+++++++... ...++
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 68999999999999999999999999999999875432 223456788999999999999999999988754 35789
Q ss_pred EEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC-
Q 006004 235 LVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN- 313 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~- 313 (665)
++|||+.++.+.........+++..++.++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++..+.....
T Consensus 83 l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 162 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMS 162 (266)
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccccc
Confidence 9999998765555444445789999999999999999999999999999999999999999999999999986542211
Q ss_pred -CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc
Q 006004 314 -LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA 392 (665)
Q Consensus 314 -~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~ 392 (665)
.......++..|+|||++.+ ..++.++|+|||||++|+|++|++||...+....+..+... +.
T Consensus 163 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~---~~------------ 226 (266)
T cd06651 163 GTGIRSVTGTPYWMSPEVISG-EGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQ---PT------------ 226 (266)
T ss_pred CCccccCCccccccCHHHhCC-CCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcC---CC------------
Confidence 11223457899999999876 56889999999999999999999999876655444433211 00
Q ss_pred cCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCC
Q 006004 393 TSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFK 444 (665)
Q Consensus 393 ~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~ 444 (665)
.+ .....+++.+.+|| +||..||++|||+.++|+||||.
T Consensus 227 ---~~---------~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 227 ---NP---------QLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred ---CC---------CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 00 11124677889999 57778999999999999999996
No 191
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=6.6e-42 Score=334.24 Aligned_cols=279 Identities=31% Similarity=0.584 Sum_probs=229.1
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCC-CCCcceeeeeeecc-CCcEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLD-HPNVMKLEGLVTSR-SGSLY 234 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~-~~~l~ 234 (665)
.++|++++++|+|-|+.||.|++..+.+.++||+++. -..+.+.||+.||+.|. ||||++|++++.+. +....
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP-----VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa 111 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP-----VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS 111 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeech-----HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence 4689999999999999999999999999999999874 34567899999999996 99999999998876 55678
Q ss_pred EEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCC-CcEEEEecccceecCCCCC
Q 006004 235 LVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNA-GVLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~-g~lKL~DFGlA~~~~~~~~ 313 (665)
||+||+++.....+- ..|+..+++.|+.||+.||+|||++||+|||+||.|++||.. -.++|+|+|||.++.+...
T Consensus 112 LiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~e 188 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188 (338)
T ss_pred hHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCce
Confidence 999999974443333 258899999999999999999999999999999999999954 5799999999999876543
Q ss_pred CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCC-CCCCCCChHHHHHHHHHhcCCCCh-hHHhhhcccc
Q 006004 314 LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGK-PIMPGRTEVEQMHKIFKLCGSPSE-DYWRKSKSAH 391 (665)
Q Consensus 314 ~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~-~pF~g~~~~e~l~kI~~~~g~p~~-~~~~~~~~~~ 391 (665)
..-++.+..|--||++.....|+.+.|+|||||+|..|+..+ |.|.|.++.+|+-+|.+++|+..- .|..+.....
T Consensus 189 --YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~L 266 (338)
T KOG0668|consen 189 --YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDL 266 (338)
T ss_pred --eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCC
Confidence 455678999999999998889999999999999999998877 556899999999999999997532 3444433222
Q ss_pred ccCCC------CCCcchhhhhhhccC-CcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCC
Q 006004 392 ATSFK------PQQPYKRKVLETFRN-FPQSALALVDKLLTIEPENRGSAASALRSEFFKT 445 (665)
Q Consensus 392 ~~~~~------~~~p~~~~~~~~~~~-~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~ 445 (665)
...+. ...++.+.+.....+ ++++++|||.++|.+|-++|+||.|++.||||..
T Consensus 267 dp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~ 327 (338)
T KOG0668|consen 267 DPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAP 327 (338)
T ss_pred ChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHH
Confidence 22111 122233333222233 5699999999999999999999999999999974
No 192
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=4.2e-40 Score=336.46 Aligned_cols=257 Identities=30% Similarity=0.477 Sum_probs=211.6
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++.+.||.|+||.||+|.+..+++.+|+|++.... ....+.+.+|++++++++||||+++++++.... .+|++|
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~l~~ 79 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP--GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRD-KLWIVM 79 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc--hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCC-EEEEEE
Confidence 47999999999999999999999999999999997543 235567889999999999999999999987755 799999
Q ss_pred EeccccchhhhcCC-CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 238 EYMEHDLAGLATTP-GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 238 Ey~~g~ll~~~~~~-~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
||+.++.+..+... ...+++.++..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++..+..... ..
T Consensus 80 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-~~ 158 (262)
T cd06613 80 EYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA-KR 158 (262)
T ss_pred eCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhh-cc
Confidence 99998766655443 36899999999999999999999999999999999999999999999999999987643221 12
Q ss_pred ccccccccccCcccccCC--cccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccC
Q 006004 317 TSRVVTLWYRAPELLLGA--TKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATS 394 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~--~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~ 394 (665)
....++..|+|||++.+. ..++.++|+|||||++|+|++|.+||.+.+.......+....-.+ .
T Consensus 159 ~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~-~------------- 224 (262)
T cd06613 159 KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPP-P------------- 224 (262)
T ss_pred ccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC-c-------------
Confidence 345788999999998753 267889999999999999999999998877665554433210000 0
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcC
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEF 442 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~ 442 (665)
.......++.++.+||.+||..||..|||+.++|.|+|
T Consensus 225 ----------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 225 ----------KLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred ----------cccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 00011245778999999999999999999999999998
No 193
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1e-39 Score=333.36 Aligned_cols=254 Identities=28% Similarity=0.476 Sum_probs=216.0
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+|+.++.||.|+||.||.+++..+++.+++|.+............+.+|+.++++++|+||+++++++.... .++++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDN-TLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCC-eEEEEEE
Confidence 489999999999999999999999999999999876656666777889999999999999999999998754 7999999
Q ss_pred ecccc-chhhhcCC-CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 239 YMEHD-LAGLATTP-GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 239 y~~g~-ll~~~~~~-~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|+.++ +...+... ...+++.++..++.|++.||.|||+.|++|+||+|+||+++.++.+||+|||++........ ..
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~-~~ 158 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS-MA 158 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc-cc
Confidence 99875 44444433 35689999999999999999999999999999999999999999999999999987644331 23
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFK 396 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~ 396 (665)
....+++.|+|||++.+ ..++.++|+|||||++|+|++|..||...+..+....+... .+.
T Consensus 159 ~~~~~~~~y~ape~~~~-~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~--~~~---------------- 219 (256)
T cd08221 159 ETVVGTPYYMSPELCQG-VKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQG--NYT---------------- 219 (256)
T ss_pred cccCCCccccCHhhcCC-CCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC--CCC----------------
Confidence 44578999999999876 45789999999999999999999999988777766665431 110
Q ss_pred CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 397 PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 397 ~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.....++.++.+||.+||..||.+||++.++|+|+|+
T Consensus 220 ----------~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 220 ----------PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred ----------CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 0013578899999999999999999999999999996
No 194
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=3.1e-40 Score=340.15 Aligned_cols=255 Identities=25% Similarity=0.449 Sum_probs=205.1
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeecc-----CC
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSR-----SG 231 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~-----~~ 231 (665)
+.|++.+.||+|+||.||+|.+..+++.||+|++..... ....+.+|+.+++++ +|+||+++++++... ..
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc---cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 369999999999999999999999999999999875432 234577899999998 799999999998753 23
Q ss_pred cEEEEEEeccccchhh-hcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecC
Q 006004 232 SLYLVFEYMEHDLAGL-ATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYD 309 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~-~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~ 309 (665)
.+|+||||+.++.+.. +.. ....+++..+..++.||+.||.|||++||+|+||||+|||++.++.+||+|||++....
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~ 162 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 162 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecc
Confidence 5899999998755444 333 23468999999999999999999999999999999999999999999999999998764
Q ss_pred CCCCCCcccccccccccCcccccC----CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHh
Q 006004 310 PSQNLPLTSRVVTLWYRAPELLLG----ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWR 385 (665)
Q Consensus 310 ~~~~~~~~~~~gT~~Y~APE~l~~----~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~ 385 (665)
... .......|++.|+|||++.+ ...|+.++|||||||++|+|++|..||...........+... +
T Consensus 163 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~---~------ 232 (272)
T cd06637 163 RTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN---P------ 232 (272)
T ss_pred ccc-ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcC---C------
Confidence 322 12344578999999999863 235788999999999999999999999765543333222110 0
Q ss_pred hhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 386 KSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 386 ~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
. .......++..+.+||.+||..||.+|||+.++|.||||
T Consensus 233 ----------~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 233 ----------A--------PRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred ----------C--------CCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 0 000112467889999999999999999999999999998
No 195
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=5.5e-40 Score=337.38 Aligned_cols=256 Identities=27% Similarity=0.444 Sum_probs=209.1
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC----CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM----DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~----~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~ 234 (665)
+|++.+.||+|+||.||+|.+ .+++.+|+|.+..... .......+.+|+++|++++|+||+++++++... ..+|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~ 78 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD-NTIS 78 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC-CeEE
Confidence 478889999999999999986 5788999999875432 223446688999999999999999999998875 4899
Q ss_pred EEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC---
Q 006004 235 LVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS--- 311 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~--- 311 (665)
+||||+.++.+..+......+++..+..++.||+.||.|||+.||+|+||+|+|||++.++.++|+|||++......
T Consensus 79 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 158 (265)
T cd06631 79 IFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH 158 (265)
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc
Confidence 99999998766655555557999999999999999999999999999999999999999999999999998765321
Q ss_pred --CCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcc
Q 006004 312 --QNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKS 389 (665)
Q Consensus 312 --~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~ 389 (665)
.........++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+.......+....+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---------- 227 (265)
T cd06631 159 GTHSNMLKSMHGTPYWMAPEVINE-SGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLM---------- 227 (265)
T ss_pred ccccccccccCCCccccChhhhcC-CCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCC----------
Confidence 1112234568999999999876 568899999999999999999999998776554443332211100
Q ss_pred ccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 390 AHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 390 ~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
......++..+.+||.+||..||.+|||+.++|+||||
T Consensus 228 ----------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 228 ----------------PRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred ----------------CCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 01123578899999999999999999999999999998
No 196
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1e-39 Score=332.51 Aligned_cols=253 Identities=26% Similarity=0.413 Sum_probs=211.5
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+|++.+.||+|+||.||+|.+..+++.||||.+............+.+|+.+|++++||||+++++.+.... .+++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDK-ALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCC-EEEEEEe
Confidence 489999999999999999999999999999999876665566778899999999999999999999887654 7999999
Q ss_pred eccccchh-hhcCC-CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCC-CcEEEEecccceecCCCCCCC
Q 006004 239 YMEHDLAG-LATTP-GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNA-GVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 239 y~~g~ll~-~~~~~-~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~-g~lKL~DFGlA~~~~~~~~~~ 315 (665)
|+.++.+. .+... +..+++..+..++.||+.+|.|||++||+|+||||+|||++.+ +.+||+|||++........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~-- 157 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK-- 157 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc--
Confidence 99875444 44332 3458999999999999999999999999999999999999865 4689999999987653322
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
.....++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||.+.+.......+.....
T Consensus 158 ~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~------------------ 218 (256)
T cd08220 158 AYTVVGTPCYISPELCEG-KPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTF------------------ 218 (256)
T ss_pred ccccccCCcccCchhccC-CCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCC------------------
Confidence 233568999999999876 5678999999999999999999999988776655554432100
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
......++..+.+||.+||..||.+|||+.++|+||||
T Consensus 219 ----------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 219 ----------APISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred ----------CCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 00112478899999999999999999999999999997
No 197
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.3e-40 Score=345.14 Aligned_cols=257 Identities=28% Similarity=0.504 Sum_probs=212.2
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
.+|++++.||+|+||.||++++..+++.||+|.+...... ....+.+|+.+++.++||||+++++.+.... .+|+||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~-~~~lv~ 96 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGD-ELWVVM 96 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC-EEEEee
Confidence 3799999999999999999999999999999998765432 3456789999999999999999999988754 799999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
||+.++.+..+... ..+++.++..++.||+.||.|||..||+|+||||+|||++.++.+||+|||++........ ...
T Consensus 97 e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~-~~~ 174 (296)
T cd06654 97 EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRS 174 (296)
T ss_pred cccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcccccc-ccC
Confidence 99997666555443 3689999999999999999999999999999999999999999999999999886543221 123
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKP 397 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~ 397 (665)
...+++.|+|||.+.+ ..++.++|||||||++|+|++|++||...+....+..+... +.+.
T Consensus 175 ~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~----------------- 235 (296)
T cd06654 175 TMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTPE----------------- 235 (296)
T ss_pred cccCCccccCHHHHcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcC-CCCC-----------------
Confidence 4478999999998876 56789999999999999999999999887765444332211 0000
Q ss_pred CCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 398 QQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 398 ~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
......++..+.+||.+||..||++|||+.++|+||||...
T Consensus 236 --------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 276 (296)
T cd06654 236 --------LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276 (296)
T ss_pred --------CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhcc
Confidence 01123577889999999999999999999999999999863
No 198
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=3.6e-40 Score=338.56 Aligned_cols=260 Identities=30% Similarity=0.545 Sum_probs=209.9
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC----CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM----DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~----~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~ 234 (665)
+|+..+.||+|+||.||++.+..+++.||+|++..... .....+.+.+|+.++++++|+||+++++++.... .++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~ 79 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDS-HFN 79 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCC-eEE
Confidence 37888999999999999999999999999999875432 1234567889999999999999999999988755 789
Q ss_pred EEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCC-cEEEEecccceecCCCCC
Q 006004 235 LVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAG-VLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g-~lKL~DFGlA~~~~~~~~ 313 (665)
+||||+.+..+..+.....++++..+..++.||+.||.|||++||+|+||+|+||+++.++ .+||+|||++..+.....
T Consensus 80 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~ 159 (268)
T cd06630 80 LFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGT 159 (268)
T ss_pred EEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccc
Confidence 9999999877665555556799999999999999999999999999999999999998776 699999999987643211
Q ss_pred ---CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccc
Q 006004 314 ---LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSA 390 (665)
Q Consensus 314 ---~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~ 390 (665)
.......+|..|+|||++.+ ..++.++|+|||||++|+|++|..||...+.......+....-.
T Consensus 160 ~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------ 226 (268)
T cd06630 160 GAGEFQGQLLGTIAFMAPEVLRG-EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASA------------ 226 (268)
T ss_pred cCCccccccccccceeCHhHhcc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhcc------------
Confidence 11123467899999999876 56889999999999999999999999765543333333221100
Q ss_pred cccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCC
Q 006004 391 HATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFK 444 (665)
Q Consensus 391 ~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~ 444 (665)
... ......+++++.+||.+||..||.+|||+.++|+||||+
T Consensus 227 ---~~~---------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 227 ---TTA---------PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred ---CCC---------CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 000 011235788999999999999999999999999999995
No 199
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=9.9e-40 Score=333.39 Aligned_cols=254 Identities=28% Similarity=0.517 Sum_probs=212.4
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+|++++.||+|+||.||++++..+|+.||+|.+............+.+|+.++++++||||+++++++.... .+|+|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENG-NLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCC-eEEEEEe
Confidence 489999999999999999999999999999999765544555667889999999999999999999987754 8999999
Q ss_pred ecccc-chhhhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 239 YMEHD-LAGLATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 239 y~~g~-ll~~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|+.+. +...+.. ....+++.++..++.||+.||.|||++|++|+||+|+|||++.++.++|+|||++..+..... ..
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~ 158 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE-LA 158 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh-hh
Confidence 99864 4444433 234689999999999999999999999999999999999999999999999999987643221 12
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFK 396 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~ 396 (665)
....|++.|+|||++.+ ..++.++|+|||||++|+|++|..||...+..+....+... ..+
T Consensus 159 ~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~--~~~---------------- 219 (256)
T cd08218 159 RTCIGTPYYLSPEICEN-RPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRG--SYP---------------- 219 (256)
T ss_pred hhccCCccccCHHHhCC-CCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcC--CCC----------------
Confidence 23467899999999876 56789999999999999999999999887766666555331 110
Q ss_pred CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 397 PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 397 ~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.....++.++.+||.+||..||.+||++.++|+||||
T Consensus 220 ----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 220 ----------PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred ----------CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 0113578899999999999999999999999999998
No 200
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.1e-40 Score=343.98 Aligned_cols=257 Identities=28% Similarity=0.506 Sum_probs=215.2
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
.+|++++.||.|+||.||++++..+++.||||.+..... .....+.+|+.+++.++||||+++++++.... .+|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ--PKKELIINEILVMKELKNPNIVNFLDSFLVGD-ELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC--chHHHHHHHHHHHHhcCCCceeeeeeeEecCc-eEEEEE
Confidence 369999999999999999999999999999999875433 23456789999999999999999999988754 799999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
||+.++.+..+.... .+++.++..++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++........ ...
T Consensus 96 e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~~ 173 (296)
T cd06655 96 EYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS-KRS 173 (296)
T ss_pred EecCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc-cCC
Confidence 999987776655443 689999999999999999999999999999999999999999999999999886543322 123
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKP 397 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~ 397 (665)
...+++.|+|||.+.+ ..++.++|+|||||++|+|++|++||.+.+....+..+... +.+.
T Consensus 174 ~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~~~~----------------- 234 (296)
T cd06655 174 TMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPE----------------- 234 (296)
T ss_pred CcCCCccccCcchhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCcc-----------------
Confidence 3468999999998876 56789999999999999999999999988776655544321 1100
Q ss_pred CCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 398 QQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 398 ~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
......+++.+.+||.+||..||.+|||+.+++.||||...
T Consensus 235 --------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~ 275 (296)
T cd06655 235 --------LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLA 275 (296)
T ss_pred --------cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhc
Confidence 01123578899999999999999999999999999999854
No 201
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.1e-39 Score=332.76 Aligned_cols=255 Identities=29% Similarity=0.509 Sum_probs=212.2
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-CCcEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-SGSLYLVF 237 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-~~~l~lV~ 237 (665)
+|++++.||.|+||.||++.+..++..||+|.+..........+.+..|+++++.++||||+++++++... ...+|++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 48999999999999999999999999999999987666666677788999999999999999999987653 44689999
Q ss_pred Eeccccchh-hhcC---CCCCCChhHHHHHHHHHHHHHHHHH-----hCCccccCCCcccEEEcCCCcEEEEecccceec
Q 006004 238 EYMEHDLAG-LATT---PGIKFTEPQIKCYMQQLLRGLEHCH-----SRGILHRDIKGSNLLINNAGVLKIGDFGLATTY 308 (665)
Q Consensus 238 Ey~~g~ll~-~~~~---~~~~lse~~i~~i~~QIl~aL~~LH-----~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~ 308 (665)
||+.++.+. .+.. ...++++.+++.++.||+.||.||| +.+|+|+||||+|||++.++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999875444 3322 2457999999999999999999999 899999999999999999999999999999876
Q ss_pred CCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhc
Q 006004 309 DPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSK 388 (665)
Q Consensus 309 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~ 388 (665)
..... ......+++.|+|||++.+ ..++.++|+||||+++|+|++|+.||...+..+....+... ..
T Consensus 161 ~~~~~-~~~~~~~~~~~~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~--------- 227 (265)
T cd08217 161 GHDSS-FAKTYVGTPYYMSPEQLNH-MSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEG--KF--------- 227 (265)
T ss_pred cCCcc-cccccccCCCccChhhhcC-CCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcC--CC---------
Confidence 54322 1234578999999999876 56889999999999999999999999887754444333221 00
Q ss_pred cccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 389 SAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 389 ~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
......++..+.+||.+||..||.+|||+.++|+|||+
T Consensus 228 -----------------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 228 -----------------RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred -----------------CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 01113577899999999999999999999999999995
No 202
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.8e-41 Score=365.46 Aligned_cols=260 Identities=28% Similarity=0.476 Sum_probs=227.4
Q ss_pred CCCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEE
Q 006004 155 RRADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 155 ~~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~ 234 (665)
.....|.+++.||+|.|+.|.++++..++..||||++.+...+....+.+.+|++||+.|+|||||+++.+..... .+|
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~-~ly 131 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEA-TLY 131 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecc-eeE
Confidence 3445799999999999999999999999999999999988888888788999999999999999999999998865 799
Q ss_pred EEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC
Q 006004 235 LVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL 314 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~ 314 (665)
+||||+.++.+..++...+.+.+..++.++.|++.|++|||+++|+|||||++||||+.+.++||+|||++.++... .
T Consensus 132 lV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~--~ 209 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG--L 209 (596)
T ss_pred EEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccc--c
Confidence 99999987666666666668888999999999999999999999999999999999999999999999999998743 3
Q ss_pred CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccC
Q 006004 315 PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATS 394 (665)
Q Consensus 315 ~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~ 394 (665)
.+.+++|++.|.|||++.+..+.++.+|+||+|++||.|+.|..||.|.+-.+.-.+....
T Consensus 210 ~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~g------------------- 270 (596)
T KOG0586|consen 210 MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRG------------------- 270 (596)
T ss_pred cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheee-------------------
Confidence 4678899999999999999888899999999999999999999999987644333222110
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
.....-.++.++.+||+++|.++|.+|++.++++.|.|....
T Consensus 271 ----------k~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 271 ----------KYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL 312 (596)
T ss_pred ----------eecccceeechhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence 111122478899999999999999999999999999998643
No 203
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.9e-39 Score=331.96 Aligned_cols=259 Identities=33% Similarity=0.566 Sum_probs=212.3
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+|++.+.||+|+||.||++.+..+++.||+|.++.........+.+.+|++++++++|+||+++++++...+ .+++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHRE-KVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCC-EEEEEEe
Confidence 489999999999999999999999999999999876555567788999999999999999999999877654 7899999
Q ss_pred eccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC---
Q 006004 239 YMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP--- 315 (665)
Q Consensus 239 y~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~--- 315 (665)
|+.+..+..+...+..+++..+..++.||+.||.|||+.||+|+||+|+|||++.++.+||+|||++..........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~ 159 (264)
T cd06626 80 YCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEE 159 (264)
T ss_pred cCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccccc
Confidence 99987776666665678999999999999999999999999999999999999999999999999998765433221
Q ss_pred cccccccccccCcccccCCc--ccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccccc
Q 006004 316 LTSRVVTLWYRAPELLLGAT--KYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHAT 393 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~--~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~ 393 (665)
.....+++.|+|||++.+.. .++.++|||||||++|+|++|+.||.+............. +.
T Consensus 160 ~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~--------------- 223 (264)
T cd06626 160 VQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GH--------------- 223 (264)
T ss_pred ccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CC---------------
Confidence 11346788999999987532 3789999999999999999999999765433222221111 10
Q ss_pred CCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 394 SFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 394 ~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.+..| ....+++.+.+||.+||..||.+|||+.+++.|||+
T Consensus 224 --~~~~~-------~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 224 --KPPIP-------DSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred --CCCCC-------cccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 00011 112458889999999999999999999999999996
No 204
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-42 Score=342.69 Aligned_cols=286 Identities=36% Similarity=0.600 Sum_probs=239.2
Q ss_pred eeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC----CcEEE
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS----GSLYL 235 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~----~~l~l 235 (665)
.+--+.||-|.||.||.+.|..+|+.||+|++......-...+.+.+|+.+|..++|.|++..++..+... ..+|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 44457899999999999999999999999998644333445567889999999999999999988765432 24789
Q ss_pred EEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 236 VFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 236 V~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
++|+|..+|...+..+. .|+.+.++-+++||+.||.|||+.||+||||||.|+|++.+..+||||||+|+..+.+....
T Consensus 135 ~TELmQSDLHKIIVSPQ-~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~h 213 (449)
T KOG0664|consen 135 LTELMQSDLHKIIVSPQ-ALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLN 213 (449)
T ss_pred HHHHHHhhhhheeccCC-CCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhhh
Confidence 99999999988887765 79999999999999999999999999999999999999999999999999999988877777
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhc---cccc
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSK---SAHA 392 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~---~~~~ 392 (665)
++..+.|..|+|||++.|...|+.++||||+|||+.|||..+-+|+..+..+++..|..++|+|+.+-.+... ..+.
T Consensus 214 MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~ 293 (449)
T KOG0664|consen 214 MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHV 293 (449)
T ss_pred hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHh
Confidence 8888999999999999999999999999999999999999999999999999999999999999988766421 1111
Q ss_pred cCCCCCCcchhhhhhhc--cCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 393 TSFKPQQPYKRKVLETF--RNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 393 ~~~~~~~p~~~~~~~~~--~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
.......|....+.... .+-..++.+++..||..||.+|.+.++++.|+|....
T Consensus 294 LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~ 349 (449)
T KOG0664|consen 294 LRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEG 349 (449)
T ss_pred hccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccccc
Confidence 11122222111111111 1344578999999999999999999999999998644
No 205
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.5e-40 Score=344.61 Aligned_cols=257 Identities=28% Similarity=0.499 Sum_probs=212.1
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
.+|++++.||+|+||.||++.+..+++.||+|.+...... ..+.+.+|+.+++.++|+||+++++++.... .+|+||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~lv~ 95 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGD-ELWVVM 95 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-EEEEee
Confidence 4799999999999999999999999999999999754432 3355788999999999999999999988754 789999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
||++++.+..+... ..+++.++..++.||+.||.|||+.||+|+||||+|||++.++.++|+|||++........ ...
T Consensus 96 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~-~~~ 173 (297)
T cd06656 96 EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRS 173 (297)
T ss_pred cccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCcc-CcC
Confidence 99998766655543 3589999999999999999999999999999999999999999999999999987644322 223
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKP 397 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~ 397 (665)
...+++.|+|||.+.+ ..++.++|+|||||++|+|++|.+||.+.+....+..+.. .+.+.
T Consensus 174 ~~~~~~~y~aPE~~~~-~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~-~~~~~----------------- 234 (297)
T cd06656 174 TMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPE----------------- 234 (297)
T ss_pred cccCCccccCHHHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc-CCCCC-----------------
Confidence 4578999999999876 5678999999999999999999999987665443322211 01110
Q ss_pred CCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 398 QQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 398 ~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
......++..+.+||.+||..||.+||++.++|+||||...
T Consensus 235 --------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 275 (297)
T cd06656 235 --------LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLA 275 (297)
T ss_pred --------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccc
Confidence 01123577889999999999999999999999999999864
No 206
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.9e-39 Score=333.76 Aligned_cols=258 Identities=28% Similarity=0.457 Sum_probs=209.0
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC---CHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-CCcE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM---DPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-SGSL 233 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~---~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-~~~l 233 (665)
.+|++.+.||+|+||.||++++..+|+.||||.+..... .......+.+|+.++++++||||+++++++.+. ...+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 469999999999999999999999999999999865322 234567788999999999999999999988764 3468
Q ss_pred EEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC
Q 006004 234 YLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 234 ~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~ 313 (665)
|+||||+.++.+..+......+++..+..++.||+.||.|||+.||+|+||||+|||++.++.++|+|||++........
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~ 161 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL 161 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence 89999998765555544445689999999999999999999999999999999999999999999999999986532111
Q ss_pred --CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 314 --LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 314 --~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
.......++..|+|||++.+ ..++.++|+|||||++|+|++|+.||...+....+.++.. .+..
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~~---------- 227 (265)
T cd06652 162 SGTGMKSVTGTPYWMSPEVISG-EGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT---QPTN---------- 227 (265)
T ss_pred cccccccCCCCccccChhhhcC-CCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc---CCCC----------
Confidence 11233468999999999876 5689999999999999999999999987655544433321 1100
Q ss_pred ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCC
Q 006004 392 ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFK 444 (665)
Q Consensus 392 ~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~ 444 (665)
+ .....++..+.++|.+||. +|.+||+++++++|||+.
T Consensus 228 -----~---------~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 228 -----P---------VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred -----C---------CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 0 0123567889999999994 999999999999999984
No 207
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-41 Score=345.34 Aligned_cols=282 Identities=33% Similarity=0.554 Sum_probs=235.2
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC-----Cc
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS-----GS 232 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~-----~~ 232 (665)
.+|..+..+|.|.- .|..|-|...++.||+|++..........++..+|..++..+.|+||++++.+|.... ..
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 36899999999999 8999999999999999998654333445566789999999999999999999997542 35
Q ss_pred EEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC
Q 006004 233 LYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~ 312 (665)
+|+|||||.+++...+. -.+....+..+++|++.|+.|||+.||+||||||+||++..++.+||.|||+|+..+..
T Consensus 96 ~y~v~e~m~~nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~- 171 (369)
T KOG0665|consen 96 VYLVMELMDANLCQVIL---MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD- 171 (369)
T ss_pred HHHHHHhhhhHHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcc-
Confidence 89999999999888776 35788899999999999999999999999999999999999999999999999986654
Q ss_pred CCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc
Q 006004 313 NLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA 392 (665)
Q Consensus 313 ~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~ 392 (665)
..++.++.|+.|+|||++.+ ..|...+||||+||++.||++|+..|+|.+..++..+|...+|+|.+.|.++....-+
T Consensus 172 -~~mtpyVvtRyyrapevil~-~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r 249 (369)
T KOG0665|consen 172 -FMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVR 249 (369)
T ss_pred -cccCchhheeeccCchheec-cCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHH
Confidence 45788999999999999998 4599999999999999999999999999999999999999999999999877543222
Q ss_pred cCCC-----------CCCcchhh--hhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 393 TSFK-----------PQQPYKRK--VLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 393 ~~~~-----------~~~p~~~~--~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
.... ...|.... ..+..+.-+..+++|+.+||..||++|.++.+||+||||+-+
T Consensus 250 ~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw 316 (369)
T KOG0665|consen 250 NYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVW 316 (369)
T ss_pred HHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeeee
Confidence 2111 11110000 011111223568999999999999999999999999999833
No 208
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.6e-39 Score=331.09 Aligned_cols=255 Identities=32% Similarity=0.510 Sum_probs=211.3
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC---CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM---DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~---~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~l 235 (665)
+|+..+.||+|+||.||+|.+..+++.||+|.+..... ..+..+.+.+|+.+++.++|+||+++++++.... .+|+
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~l 79 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED-NLYI 79 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCC-eEEE
Confidence 47778999999999999999998999999999875432 2445677889999999999999999999887654 7899
Q ss_pred EEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 236 VFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 236 V~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||||+.+..+..+......+++.++..++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++....... .
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~--~ 157 (258)
T cd06632 80 FLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS--F 157 (258)
T ss_pred EEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc--c
Confidence 99999986665555555579999999999999999999999999999999999999999999999999988764332 2
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
.....++..|+|||.+.....++.++|+|||||++|+|++|++||......+...++.....
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~------------------ 219 (258)
T cd06632 158 AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKE------------------ 219 (258)
T ss_pred ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhccc------------------
Confidence 34456899999999987633489999999999999999999999987665444443322100
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.......+++++.+||.+||..||.+|||+.++|.|||+
T Consensus 220 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 220 ---------LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred ---------CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 001123578899999999999999999999999999996
No 209
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.2e-39 Score=336.09 Aligned_cols=261 Identities=31% Similarity=0.545 Sum_probs=208.9
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC--------CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM--------DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS 230 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~ 230 (665)
+|.+.+.||.|+||.||+|.+..+|+.||+|.++.... .....+.+.+|+.+++.++||||+++++++....
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 48889999999999999999999999999998864321 1122456788999999999999999999887754
Q ss_pred CcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCC
Q 006004 231 GSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDP 310 (665)
Q Consensus 231 ~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~ 310 (665)
.+++||||+.++.+..+......+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 -~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 160 (272)
T cd06629 82 -YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDD 160 (272)
T ss_pred -ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccc
Confidence 7899999998866655555546899999999999999999999999999999999999999999999999999976542
Q ss_pred CCC-CCcccccccccccCcccccCCc-ccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhc
Q 006004 311 SQN-LPLTSRVVTLWYRAPELLLGAT-KYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSK 388 (665)
Q Consensus 311 ~~~-~~~~~~~gT~~Y~APE~l~~~~-~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~ 388 (665)
... .......++..|+|||++.... .++.++|+|||||++|+|++|..||...+..+.+..+.....
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~----------- 229 (272)
T cd06629 161 IYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRS----------- 229 (272)
T ss_pred cccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhcccc-----------
Confidence 211 1123346789999999987543 478999999999999999999999976655444433221100
Q ss_pred cccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 389 SAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 389 ~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
...+. ......++..+.+||.+||.+||.+|||+.++|+||||
T Consensus 230 ---~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 230 ---APPIP---------PDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred ---CCcCC---------ccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 00000 01223578999999999999999999999999999997
No 210
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=5.9e-40 Score=335.82 Aligned_cols=253 Identities=29% Similarity=0.448 Sum_probs=211.3
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
+|++.+.||.|+||.||+|++..+++.||+|++..... .....+.+.+|++++++++||||+++++++.... .+|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEE-NMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCC-eEEEEE
Confidence 48999999999999999999999999999999976543 3355678899999999999999999999987654 799999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
||+.+..+.........+++.++..++.||+.||.|||++||+|+||+|+|||+++++.++|+|||++....... ...
T Consensus 80 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--~~~ 157 (258)
T cd05578 80 DLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT--LTT 157 (258)
T ss_pred eCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc--ccc
Confidence 999987666555544689999999999999999999999999999999999999999999999999988764432 223
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCCh--HHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTE--VEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~--~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
...++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+. .+.+...... .
T Consensus 158 ~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~---------------- 217 (258)
T cd05578 158 STSGTPGYMAPEVLCR-QGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET---A---------------- 217 (258)
T ss_pred ccCCChhhcCHHHHcc-cCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc---c----------------
Confidence 4567889999999876 5589999999999999999999999987764 2222221110 0
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCH--HHHHhCcCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSA--ASALRSEFF 443 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa--~eaL~Hp~f 443 (665)
.......++..+.+||.+||..||.+|+++ .++++||||
T Consensus 218 ---------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 218 ---------DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred ---------cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 001113467899999999999999999999 999999998
No 211
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.7e-39 Score=342.49 Aligned_cols=255 Identities=29% Similarity=0.501 Sum_probs=214.0
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
.|++++.||+|+||.||++.+..+++.||+|++..... ..+..+.+.+|+.+++.++||||+++++++.... ..|+||
T Consensus 16 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~-~~~lv~ 94 (307)
T cd06607 16 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREH-TAWLVM 94 (307)
T ss_pred hhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCC-eEEEEH
Confidence 59999999999999999999999999999999875432 4455567889999999999999999999988755 789999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
||+.|.+...+......+++.++..++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++...... .
T Consensus 95 e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-----~ 169 (307)
T cd06607 95 EYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA-----N 169 (307)
T ss_pred HhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC-----C
Confidence 99999887777655567999999999999999999999999999999999999999999999999998765432 2
Q ss_pred cccccccccCcccccC--CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 318 SRVVTLWYRAPELLLG--ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~--~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
...+++.|+|||++.+ ...++.++|||||||++|+|++|.+||.+.+.......+... .+
T Consensus 170 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~--~~---------------- 231 (307)
T cd06607 170 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--DS---------------- 231 (307)
T ss_pred CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC--CC----------------
Confidence 3567889999998852 356889999999999999999999999887765544433210 00
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
+.. ....++..+.+||.+||..||.+||++.+++.||||...
T Consensus 232 -~~~--------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 273 (307)
T cd06607 232 -PTL--------SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE 273 (307)
T ss_pred -CCC--------CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence 000 011367789999999999999999999999999999864
No 212
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.7e-39 Score=333.42 Aligned_cols=258 Identities=29% Similarity=0.475 Sum_probs=208.7
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccC----
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRS---- 230 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~---- 230 (665)
..++|++.+.||+|+||.||+|.+..+++.||+|++..... ....+.+|+.+++++ .|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 34689999999999999999999999999999999875432 345678999999999 7999999999987532
Q ss_pred -CcEEEEEEeccccchhhhcC----CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccc
Q 006004 231 -GSLYLVFEYMEHDLAGLATT----PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLA 305 (665)
Q Consensus 231 -~~l~lV~Ey~~g~ll~~~~~----~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA 305 (665)
..+|+||||+.+..+..+.. .+..+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 35899999999865543332 2357999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCCcccccccccccCcccccC----CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCh
Q 006004 306 TTYDPSQNLPLTSRVVTLWYRAPELLLG----ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSE 381 (665)
Q Consensus 306 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~ 381 (665)
........ ......+++.|+|||++.. ...++.++|||||||+||+|++|++||........+..+... +..
T Consensus 161 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~ 236 (275)
T cd06608 161 AQLDSTLG-RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN---PPP 236 (275)
T ss_pred eecccchh-hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhcc---CCC
Confidence 87643222 2234568999999998753 235778999999999999999999999876655544443221 000
Q ss_pred hHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 382 DYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
. ......++..+.+||.+||..||.+|||+.++++|||+
T Consensus 237 ~-----------------------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 237 T-----------------------LKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred C-----------------------CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 0 00112467889999999999999999999999999996
No 213
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3e-39 Score=337.16 Aligned_cols=258 Identities=30% Similarity=0.475 Sum_probs=207.5
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccC----C
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRS----G 231 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~----~ 231 (665)
.++|++.+.||+|+||.||++.+..+++.||+|.+.... .....+.+|+.+++++ +||||+++++++...+ +
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 97 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS---DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGG 97 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc---cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCC
Confidence 457999999999999999999999999999999986432 2234567899999999 8999999999886432 3
Q ss_pred cEEEEEEeccccchhhhc----CCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEeccccee
Q 006004 232 SLYLVFEYMEHDLAGLAT----TPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATT 307 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~----~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~ 307 (665)
.+|+||||+.++.+..+. ..+..+++..++.++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++..
T Consensus 98 ~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~ 177 (291)
T cd06639 98 QLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQ 177 (291)
T ss_pred eeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchh
Confidence 589999999876554332 2345789999999999999999999999999999999999999999999999999887
Q ss_pred cCCCCCCCcccccccccccCcccccCCc----ccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhH
Q 006004 308 YDPSQNLPLTSRVVTLWYRAPELLLGAT----KYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDY 383 (665)
Q Consensus 308 ~~~~~~~~~~~~~gT~~Y~APE~l~~~~----~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~ 383 (665)
+..... ......++..|+|||++.... .++.++|||||||++|+|++|++||...+....+..+.+. +...
T Consensus 178 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~---~~~~- 252 (291)
T cd06639 178 LTSTRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRN---PPPT- 252 (291)
T ss_pred cccccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcC---CCCC-
Confidence 543221 122346889999999886422 3688999999999999999999999887765555444221 0000
Q ss_pred HhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCC
Q 006004 384 WRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFK 444 (665)
Q Consensus 384 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~ 444 (665)
......++..+.+||.+||..||++||++.++|+||||+
T Consensus 253 ----------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 253 ----------------------LLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred ----------------------CCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 000124567899999999999999999999999999994
No 214
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.5e-41 Score=359.92 Aligned_cols=261 Identities=30% Similarity=0.492 Sum_probs=212.8
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l~lV 236 (665)
..|+++++||.||.+.||++.. .+...||+|++.....+...+.-+..||..|.+| .|.+||+|++|-.. ++.+|||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~-s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~-d~~lYmv 438 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLN-SDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT-DGYLYMV 438 (677)
T ss_pred chhhHHHhhcCCCcceeeeeec-CCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc-CceEEEE
Confidence 4599999999999999999986 4456789998887777888889999999999999 59999999997555 5699999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC-CCC
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ-NLP 315 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~-~~~ 315 (665)
|||-+.||-..+.+...-++.-.++.|.+|||.|+.++|..||||.||||.|+|+-. |.+||+|||+|..+..+. +..
T Consensus 439 mE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTTsI~ 517 (677)
T KOG0596|consen 439 MECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTTSIV 517 (677)
T ss_pred eecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe-eeEEeeeechhcccCcccccee
Confidence 999999999988887766666699999999999999999999999999999999986 899999999999886543 334
Q ss_pred cccccccccccCcccccCC----------cccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHh
Q 006004 316 LTSRVVTLWYRAPELLLGA----------TKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWR 385 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~----------~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~ 385 (665)
..+.+||+.||+||.+... -..+.++||||||||||+|+.|++||.... .++.++..+.. |..
T Consensus 518 kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~--n~~aKl~aI~~-P~~---- 590 (677)
T KOG0596|consen 518 KDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII--NQIAKLHAITD-PNH---- 590 (677)
T ss_pred eccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH--HHHHHHHhhcC-CCc----
Confidence 5667999999999998631 236789999999999999999999996532 13333333211 111
Q ss_pred hhccccccCCCCCCcchhhhhhhccCCc--HHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCC
Q 006004 386 KSKSAHATSFKPQQPYKRKVLETFRNFP--QSALALVDKLLTIEPENRGSAASALRSEFFKTEPL 448 (665)
Q Consensus 386 ~~~~~~~~~~~~~~p~~~~~~~~~~~~s--~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~ 448 (665)
. ..|+.+| .+++++++.||..||.+|+|+.++|+|||+...+.
T Consensus 591 ----------~----------Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~i 635 (677)
T KOG0596|consen 591 ----------E----------IEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQPI 635 (677)
T ss_pred ----------c----------ccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCcccccccc
Confidence 0 0111222 23899999999999999999999999999986443
No 215
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=6.4e-40 Score=344.09 Aligned_cols=259 Identities=27% Similarity=0.449 Sum_probs=213.6
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
.|.....||+|+||.||++.+..++..||||.+.... ......+.+|+.+++.++|+||+++++.+.... ..|+|||
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~-~~~lv~e 99 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGD-ELWVVME 99 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCC-eEEEEEe
Confidence 4666788999999999999999999999999986432 334556889999999999999999999988754 7899999
Q ss_pred eccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccc
Q 006004 239 YMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTS 318 (665)
Q Consensus 239 y~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~ 318 (665)
|+.++.+..+.... .+++.++..++.||+.||.|||++||+||||||+|||++.++.++|+|||++........ ....
T Consensus 100 ~~~~~~L~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~-~~~~ 177 (292)
T cd06658 100 FLEGGALTDIVTHT-RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP-KRKS 177 (292)
T ss_pred CCCCCcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc-cCce
Confidence 99987766655443 689999999999999999999999999999999999999999999999999876543221 2234
Q ss_pred ccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCC
Q 006004 319 RVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQ 398 (665)
Q Consensus 319 ~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~ 398 (665)
..+++.|+|||++.+ ..++.++|+|||||++|+|++|+.||.+.+..+.+..+...... .
T Consensus 178 ~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~-------------------~ 237 (292)
T cd06658 178 LVGTPYWMAPEVISR-LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPP-------------------R 237 (292)
T ss_pred eecCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-------------------c
Confidence 578999999999875 56889999999999999999999999887766655544321100 0
Q ss_pred CcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCCC
Q 006004 399 QPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPLP 449 (665)
Q Consensus 399 ~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~~ 449 (665)
. .....++..+.+||.+||..||.+|||+.++|+||||.....|
T Consensus 238 ~-------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~ 281 (292)
T cd06658 238 V-------KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPP 281 (292)
T ss_pred c-------ccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCc
Confidence 0 0112467889999999999999999999999999999976543
No 216
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.4e-39 Score=337.80 Aligned_cols=255 Identities=26% Similarity=0.470 Sum_probs=205.2
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeecc-----CC
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSR-----SG 231 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~-----~~ 231 (665)
+.|++.+.||.|+||.||+|++..+++.||+|++.... .....+..|+.+++++ +|+||+++++++... ..
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 92 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDD 92 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCC
Confidence 47999999999999999999999999999999986432 3345578899999998 799999999988532 34
Q ss_pred cEEEEEEeccccchh-hhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecC
Q 006004 232 SLYLVFEYMEHDLAG-LATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYD 309 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~-~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~ 309 (665)
.+|++|||+.++.+. .+.. ....+++..++.++.||+.||.|||+.||+|+||||+|||++.++.++|+|||++....
T Consensus 93 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~ 172 (282)
T cd06636 93 QLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 172 (282)
T ss_pred EEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhh
Confidence 689999999875444 3332 23458899999999999999999999999999999999999999999999999988654
Q ss_pred CCCCCCcccccccccccCcccccC----CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHh
Q 006004 310 PSQNLPLTSRVVTLWYRAPELLLG----ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWR 385 (665)
Q Consensus 310 ~~~~~~~~~~~gT~~Y~APE~l~~----~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~ 385 (665)
.... ......|++.|+|||++.. ...++.++|+|||||++|+|++|.+||........+..+... ..
T Consensus 173 ~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~---~~----- 243 (282)
T cd06636 173 RTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN---PP----- 243 (282)
T ss_pred cccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhC---CC-----
Confidence 3221 2334578999999998863 245788999999999999999999999776554443332110 00
Q ss_pred hhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 386 KSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 386 ~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.......++.++.+||.+||..||.+|||+.++|+||||
T Consensus 244 -------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 244 -------------------PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred -------------------CCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 000113578899999999999999999999999999998
No 217
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-41 Score=360.55 Aligned_cols=251 Identities=25% Similarity=0.405 Sum_probs=217.7
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEecccc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEHD 243 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g~ 243 (665)
+.||+|-||+||-++++.+|+.||||+|.+..........+..|+.||+.+.||.||.|...|+..+ .+++|||-+.|+
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~e-rvFVVMEKl~GD 648 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPE-RVFVVMEKLHGD 648 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCc-eEEEEehhhcch
Confidence 6899999999999999999999999999887776666678899999999999999999999999876 899999999999
Q ss_pred chhhhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCC---CcEEEEecccceecCCCCCCCcccc
Q 006004 244 LAGLATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNA---GVLKIGDFGLATTYDPSQNLPLTSR 319 (665)
Q Consensus 244 ll~~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~---g~lKL~DFGlA~~~~~~~~~~~~~~ 319 (665)
.+..++. ..++|++...++++.||+.||.|||.++|+|+||||+||||.+. -.+||||||+|+.+.+... ..+.
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF--RrsV 726 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF--RRSV 726 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhh--hhhh
Confidence 9887765 45689999999999999999999999999999999999999754 4799999999999875443 4677
Q ss_pred cccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCC-ChHHHHHHHHHhcCCCChhHHhhhccccccCCCCC
Q 006004 320 VVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGR-TEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQ 398 (665)
Q Consensus 320 ~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~-~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~ 398 (665)
+|||.|+|||++.. ..|+...|+||+|||+|.-|+|..||... +-.+|++.. .-..+..
T Consensus 727 VGTPAYLaPEVLrn-kGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNA---aFMyPp~---------------- 786 (888)
T KOG4236|consen 727 VGTPAYLAPEVLRN-KGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNA---AFMYPPN---------------- 786 (888)
T ss_pred cCCccccCHHHHhh-ccccccccceeeeEEEEEEecccccCCCccchhHHhhcc---ccccCCC----------------
Confidence 99999999999987 67999999999999999999999999654 333444432 1111222
Q ss_pred CcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 399 QPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 399 ~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
.|..+++.++|||..+|++.=.+|.+++..|.|||+++.
T Consensus 787 ---------PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 787 ---------PWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY 825 (888)
T ss_pred ---------chhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence 235799999999999999999999999999999999864
No 218
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=9.1e-40 Score=332.86 Aligned_cols=253 Identities=31% Similarity=0.501 Sum_probs=209.6
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++.+.||+|+||.||++++..+++.||+|.+.... ....+.+|+.+++.++||||+++++++.... .+|+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE----DLQEIIKEISILKQCDSPYIVKYYGSYFKNT-DLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCC-cEEEEE
Confidence 57999999999999999999999889999999986432 2567889999999999999999999988764 799999
Q ss_pred Eeccccchhhhc-CCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 238 EYMEHDLAGLAT-TPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 238 Ey~~g~ll~~~~-~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
||+.+..+..+. .....+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++........ ..
T Consensus 78 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-~~ 156 (256)
T cd06612 78 EYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA-KR 156 (256)
T ss_pred ecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc-cc
Confidence 999976555443 3456789999999999999999999999999999999999999999999999999987654321 22
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFK 396 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~ 396 (665)
....++..|+|||++.+ ..++.++|||||||++|+|++|++||...+.......+... ...
T Consensus 157 ~~~~~~~~y~~PE~~~~-~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~--------------- 217 (256)
T cd06612 157 NTVIGTPFWMAPEVIQE-IGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK---PPP--------------- 217 (256)
T ss_pred ccccCCccccCHHHHhc-CCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccC---CCC---------------
Confidence 33457899999999876 57899999999999999999999999876654433322110 000
Q ss_pred CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 397 PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 397 ~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.......++..+.+||.+||..||.+|||+.++|.||||
T Consensus 218 --------~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 218 --------TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred --------CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 001113467889999999999999999999999999998
No 219
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-40 Score=329.22 Aligned_cols=261 Identities=25% Similarity=0.396 Sum_probs=221.2
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcEE
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l~ 234 (665)
..++.+.+..||.|+.|+||+++.+.+|...|||.++... +.+..+++++.+.++... ++|+||+.+++|.... .++
T Consensus 90 dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~-Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~-dV~ 167 (391)
T KOG0983|consen 90 DINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG-NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNT-DVF 167 (391)
T ss_pred ChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC-CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc-hHH
Confidence 3456788889999999999999999999999999998655 455667778888876655 6999999999998865 688
Q ss_pred EEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhC-CccccCCCcccEEEcCCCcEEEEecccceecCCCCC
Q 006004 235 LVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSR-GILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~-gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~ 313 (665)
|.||.|......++..-.++++|..+-++...++.||.||.++ ||||||+||+|||||..|++||||||++-.+..+..
T Consensus 168 IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA 247 (391)
T KOG0983|consen 168 ICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA 247 (391)
T ss_pred HHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccc
Confidence 9999999877666666667899999999999999999999975 999999999999999999999999999988755433
Q ss_pred CCcccccccccccCcccccC--CcccCcccchhhhHHHHHHHHhCCCCCCC-CChHHHHHHHHHhcCCCChhHHhhhccc
Q 006004 314 LPLTSRVVTLWYRAPELLLG--ATKYGAAIDMWSAGCILAELFAGKPIMPG-RTEVEQMHKIFKLCGSPSEDYWRKSKSA 390 (665)
Q Consensus 314 ~~~~~~~gT~~Y~APE~l~~--~~~~~~~sDIWSLG~iLyeLltG~~pF~g-~~~~e~l~kI~~~~g~p~~~~~~~~~~~ 390 (665)
.+...|.+.|||||-+.- ...|+.++||||||++|+||.||+.||.+ .++.+.+.+|...
T Consensus 248 --htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~--------------- 310 (391)
T KOG0983|consen 248 --HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNE--------------- 310 (391)
T ss_pred --cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhc---------------
Confidence 455689999999999863 36799999999999999999999999997 5678888888651
Q ss_pred cccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 391 HATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 391 ~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
.+|..| .-..||+++.+|+..||.+|+.+||...++|+|||+...
T Consensus 311 ----ePP~L~-------~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~y 355 (391)
T KOG0983|consen 311 ----EPPLLP-------GHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRY 355 (391)
T ss_pred ----CCCCCC-------cccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeec
Confidence 111111 113499999999999999999999999999999999854
No 220
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.7e-39 Score=335.26 Aligned_cols=251 Identities=19% Similarity=0.247 Sum_probs=203.6
Q ss_pred CCeeEEEEeeccCceEEEEEEEC---CCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDL---ETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~---~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~ 234 (665)
.+|++.+.||+|+||.||+|.+. ..+..||+|.++... .......+.+|+.+++.++||||+++++++.... .+|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~ 82 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC-SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN-TMM 82 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC-CcE
Confidence 46999999999999999999865 456789999987543 2344566889999999999999999999988754 799
Q ss_pred EEEEeccccchhhhc-CCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC
Q 006004 235 LVFEYMEHDLAGLAT-TPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~-~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~ 313 (665)
+||||+.++.+..+. .....+++.+++.++.||+.||+|||++|++||||||+|||++.++.+||+|||++........
T Consensus 83 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~ 162 (266)
T cd05064 83 IVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAI 162 (266)
T ss_pred EEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccch
Confidence 999999987666444 3345799999999999999999999999999999999999999999999999998765432211
Q ss_pred CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc
Q 006004 314 LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA 392 (665)
Q Consensus 314 ~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~ 392 (665)
.......++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+.+..+......
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~-------------- 227 (266)
T cd05064 163 YTTMSGKSPVLWAAPEAIQY-HHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRL-------------- 227 (266)
T ss_pred hcccCCCCceeecCHHHHhh-CCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC--------------
Confidence 11112234678999999876 678999999999999999775 99999988877766655331100
Q ss_pred cCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 393 TSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 393 ~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.....++..+.+||.+||..||.+|||+.++++
T Consensus 228 --------------~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 228 --------------PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred --------------CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 012357888999999999999999999999875
No 221
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=3.1e-39 Score=335.45 Aligned_cols=261 Identities=30% Similarity=0.485 Sum_probs=206.9
Q ss_pred ccCCCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeec---
Q 006004 153 QPRRADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTS--- 228 (665)
Q Consensus 153 ~~~~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~--- 228 (665)
.+...++|++++.||+|+||.||+|++..+++.||+|++..... ....+.+|+.+++.+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 89 (286)
T cd06638 13 FPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD---IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDV 89 (286)
T ss_pred CCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc---hHHHHHHHHHHHHHHhcCCCeeeeeeeeeeccc
Confidence 33445689999999999999999999999999999998764321 224567899999999 79999999998742
Q ss_pred -cCCcEEEEEEeccccchhhhc----CCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecc
Q 006004 229 -RSGSLYLVFEYMEHDLAGLAT----TPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFG 303 (665)
Q Consensus 229 -~~~~l~lV~Ey~~g~ll~~~~----~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFG 303 (665)
....+|+||||++++.+..+. .....+++..+..++.||+.||.|||+.+|+||||||+||+++.++.+||+|||
T Consensus 90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg 169 (286)
T cd06638 90 KNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFG 169 (286)
T ss_pred CCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCC
Confidence 234689999999876554332 234568999999999999999999999999999999999999999999999999
Q ss_pred cceecCCCCCCCcccccccccccCcccccC----CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCC
Q 006004 304 LATTYDPSQNLPLTSRVVTLWYRAPELLLG----ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSP 379 (665)
Q Consensus 304 lA~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p 379 (665)
++..+.... .......|++.|+|||++.. ...++.++|||||||++|+|++|+.||........+.++... .+
T Consensus 170 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~--~~ 246 (286)
T cd06638 170 VSAQLTSTR-LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN--PP 246 (286)
T ss_pred ceeecccCC-CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc--CC
Confidence 998764322 12234478999999998853 245788999999999999999999999876654444332110 00
Q ss_pred ChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 380 SEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
+. ......++..+.+||.+||..||++|||+.++|+|+||
T Consensus 247 -----------------~~-------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 247 -----------------PT-------LHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred -----------------Cc-------ccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 00 00112357789999999999999999999999999997
No 222
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2.5e-39 Score=331.96 Aligned_cols=250 Identities=27% Similarity=0.401 Sum_probs=206.8
Q ss_pred eeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEeccccc
Q 006004 166 IGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEHDL 244 (665)
Q Consensus 166 LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g~l 244 (665)
||.|+||.||+|++..+++.||+|++..... .....+.+.+|+.+++.++||||+++++++.+.. .+|+||||+.++.
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKK-YIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCC-ccEEEEecCCCCc
Confidence 6899999999999999999999999976543 3345567899999999999999999999988765 7899999998766
Q ss_pred hhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccccccccc
Q 006004 245 AGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVVTLW 324 (665)
Q Consensus 245 l~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~gT~~ 324 (665)
+..+......+++.++..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++....... ......+++.
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~ 157 (262)
T cd05572 80 LWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTFCGTPE 157 (262)
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccccccCCcC
Confidence 65555555579999999999999999999999999999999999999999999999999998765432 1234478999
Q ss_pred ccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCC--hHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcch
Q 006004 325 YRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRT--EVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYK 402 (665)
Q Consensus 325 Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~--~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~ 402 (665)
|+|||.+.+ ..++.++|+|||||++|+|++|..||...+ ..+.+.++...... .
T Consensus 158 ~~~PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------------------~----- 213 (262)
T cd05572 158 YVAPEIILN-KGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGK------------------L----- 213 (262)
T ss_pred ccChhHhcC-CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCC------------------C-----
Confidence 999999875 568999999999999999999999998776 44444443310000 0
Q ss_pred hhhhhhccCCcHHHHHHHHHhcccCcCCCcC-----HHHHHhCcCCCCC
Q 006004 403 RKVLETFRNFPQSALALVDKLLTIEPENRGS-----AASALRSEFFKTE 446 (665)
Q Consensus 403 ~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT-----a~eaL~Hp~f~~~ 446 (665)
......++++.+||.+||..||.+|+| +.|+++||||+..
T Consensus 214 ----~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 214 ----EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred ----CCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence 011234788999999999999999999 9999999999864
No 223
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=8.1e-41 Score=356.44 Aligned_cols=291 Identities=32% Similarity=0.541 Sum_probs=237.4
Q ss_pred cccccccccccCCccCCCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCC----
Q 006004 140 WLTSVAGEAIKGWQPRRADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLD---- 215 (665)
Q Consensus 140 ~~~~~~g~~~~~~~~~~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~---- 215 (665)
++....|+.++. +|.+....|+|-||+|..|.+..-|..||||+|+.... ..+.=++|++||++|.
T Consensus 421 YYrv~igE~LD~-------RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~---M~KtGl~EleiLkKL~~AD~ 490 (752)
T KOG0670|consen 421 YYRVRIGELLDS-------RYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV---MHKTGLKELEILKKLNDADP 490 (752)
T ss_pred eEEEehhhhhcc-------eeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH---HhhhhhHHHHHHHHhhccCc
Confidence 555666777765 89999999999999999999999999999999986432 2333468999999994
Q ss_pred --CCCcceeeeeeeccCCcEEEEEEeccccchhhhcCCC--CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEE
Q 006004 216 --HPNVMKLEGLVTSRSGSLYLVFEYMEHDLAGLATTPG--IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLI 291 (665)
Q Consensus 216 --HpnIV~l~~~~~~~~~~l~lV~Ey~~g~ll~~~~~~~--~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILl 291 (665)
--++++|+..|...+ ++|||||-+.-+|...+..-+ ..|....++.|++||+.||.+|...||+|.||||+||||
T Consensus 491 Edk~Hclrl~r~F~hkn-HLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLV 569 (752)
T KOG0670|consen 491 EDKFHCLRLFRHFKHKN-HLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILV 569 (752)
T ss_pred hhhhHHHHHHHHhhhcc-eeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEe
Confidence 358899999888765 899999999988887776543 458889999999999999999999999999999999999
Q ss_pred cCC-CcEEEEecccceecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHH
Q 006004 292 NNA-GVLKIGDFGLATTYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMH 370 (665)
Q Consensus 292 d~~-g~lKL~DFGlA~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~ 370 (665)
+.. ..+||||||.|....... .+.+..+..|+|||+++| ..|+...|+||+||+||||.||+.+|+|.++.+++.
T Consensus 570 NE~k~iLKLCDfGSA~~~~ene---itPYLVSRFYRaPEIiLG-~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLr 645 (752)
T KOG0670|consen 570 NESKNILKLCDFGSASFASENE---ITPYLVSRFYRAPEIILG-LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLR 645 (752)
T ss_pred ccCcceeeeccCcccccccccc---ccHHHHHHhccCcceeec-CcccCCccceeeceeeEEeeccceecCCCCcHHHHH
Confidence 965 569999999999875543 578888999999999998 789999999999999999999999999999999999
Q ss_pred HHHHhcCCCChhHHhhhccc--c--------------------ccCCCCCCcchhhhhhhcc--CCc-------HHHHHH
Q 006004 371 KIFKLCGSPSEDYWRKSKSA--H--------------------ATSFKPQQPYKRKVLETFR--NFP-------QSALAL 419 (665)
Q Consensus 371 kI~~~~g~p~~~~~~~~~~~--~--------------------~~~~~~~~p~~~~~~~~~~--~~s-------~~a~dL 419 (665)
....+.|.++.....+.... | ........|.+-...++.. .++ ..+++|
T Consensus 646 l~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdL 725 (752)
T KOG0670|consen 646 LFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDL 725 (752)
T ss_pred HHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHH
Confidence 99999999988776653211 0 0011112222211111111 122 357899
Q ss_pred HHHhcccCcCCCcCHHHHHhCcCCCC
Q 006004 420 VDKLLTIEPENRGSAASALRSEFFKT 445 (665)
Q Consensus 420 I~~lL~~DP~~RpTa~eaL~Hp~f~~ 445 (665)
|.+||..||++|.|..|||.||||+.
T Consensus 726 Ldkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 726 LDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred HHHHhccChhhcCCHHHHhcCCcccC
Confidence 99999999999999999999999974
No 224
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2e-39 Score=337.83 Aligned_cols=251 Identities=25% Similarity=0.404 Sum_probs=197.9
Q ss_pred EeeccCceEEEEEEECCCCcEEEEEEEecCCCCHH-HHHHHHHHHHHHH---hCCCCCcceeeeeeeccCCcEEEEEEec
Q 006004 165 KIGQGTYSSVYKARDLETGKIVALKKVRFANMDPE-SVRFMAREIHILR---KLDHPNVMKLEGLVTSRSGSLYLVFEYM 240 (665)
Q Consensus 165 ~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~-~~~~~~~Ei~iL~---~L~HpnIV~l~~~~~~~~~~l~lV~Ey~ 240 (665)
.||+|+||.||++.+..+++.||+|.+........ ......+|..+++ ..+||||+.+++++...+ .+|+||||+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~lv~e~~ 79 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPD-KLCFILDLM 79 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCC-eEEEEEecC
Confidence 48999999999999999999999999875443211 1222344544443 347999999999988754 789999999
Q ss_pred cccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccccc
Q 006004 241 EHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRV 320 (665)
Q Consensus 241 ~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~ 320 (665)
.++.+..+......+++.++..++.||+.||.|||+.||+||||||+|||++.++.++|+|||++....... .....
T Consensus 80 ~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~ 156 (279)
T cd05633 80 NGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PHASV 156 (279)
T ss_pred CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC---ccCcC
Confidence 987666555555579999999999999999999999999999999999999999999999999997654322 23347
Q ss_pred ccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChH--HHHHHHHHhcCCCChhHHhhhccccccCCCCC
Q 006004 321 VTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEV--EQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQ 398 (665)
Q Consensus 321 gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~--e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~ 398 (665)
||+.|+|||.+.+...++.++|+||+||++|+|++|..||.+.... ..+..... ..
T Consensus 157 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~---~~------------------- 214 (279)
T cd05633 157 GTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL---TV------------------- 214 (279)
T ss_pred CCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh---cC-------------------
Confidence 8999999999875466899999999999999999999999765321 11111110 00
Q ss_pred CcchhhhhhhccCCcHHHHHHHHHhcccCcCCCc-----CHHHHHhCcCCCCCC
Q 006004 399 QPYKRKVLETFRNFPQSALALVDKLLTIEPENRG-----SAASALRSEFFKTEP 447 (665)
Q Consensus 399 ~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~Rp-----Ta~eaL~Hp~f~~~~ 447 (665)
.......+++++.+||.+||..||.+|+ |+.++++||||+...
T Consensus 215 ------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 215 ------NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred ------CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence 0011235788999999999999999999 699999999998743
No 225
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=9.4e-40 Score=334.87 Aligned_cols=255 Identities=29% Similarity=0.423 Sum_probs=208.3
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+|++.+.||.|+||.||++.+..+++.||+|.+..... ......+.+|++++++++||||+++++++.... .+|+|||
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~lv~e 79 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYNNG-DISICME 79 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeecCC-EEEEEEE
Confidence 68889999999999999999999999999999876543 345567889999999999999999999988764 7999999
Q ss_pred eccccchhhhc-CCCCCCChhHHHHHHHHHHHHHHHHHh-CCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 239 YMEHDLAGLAT-TPGIKFTEPQIKCYMQQLLRGLEHCHS-RGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 239 y~~g~ll~~~~-~~~~~lse~~i~~i~~QIl~aL~~LH~-~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|+.+..+..+. .....+++..+..++.||+.||.|||+ .|++|+||||+||+++.++.++|+|||++..+.....
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--- 156 (265)
T cd06605 80 YMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA--- 156 (265)
T ss_pred ecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh---
Confidence 99965444444 333689999999999999999999999 9999999999999999999999999999876543221
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRT-----EVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~-----~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
....++..|+|||.+.+ ..++.++|||||||++|+|++|..||...+ ..+.+..+... ..
T Consensus 157 ~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~----------- 221 (265)
T cd06605 157 KTFVGTSSYMAPERIQG-NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE---PP----------- 221 (265)
T ss_pred hcccCChhccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC---CC-----------
Confidence 12578899999999876 578999999999999999999999997642 22222222110 00
Q ss_pred ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 392 ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 392 ~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
+..+ ...++..+.+||.+||..||.+|||+.+++.||||+..
T Consensus 222 -----~~~~--------~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 222 -----PRLP--------SGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred -----CCCC--------hhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 0000 01278889999999999999999999999999999753
No 226
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.2e-39 Score=339.24 Aligned_cols=261 Identities=21% Similarity=0.334 Sum_probs=207.0
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCC-CCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLD-HPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~~l~lV 236 (665)
++|+.++.||+|+||.||++++..+++.||||.+...... .....+.+|+.++.++. |+||+++++++.... ..+++
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~-~~~~~ 81 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREG-DCWIC 81 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCC-cEEEE
Confidence 4678889999999999999999999999999998755433 44566789999999995 999999999887654 78999
Q ss_pred EEeccccchhhh----cCCCCCCChhHHHHHHHHHHHHHHHHHhC-CccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 237 FEYMEHDLAGLA----TTPGIKFTEPQIKCYMQQLLRGLEHCHSR-GILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 237 ~Ey~~g~ll~~~----~~~~~~lse~~i~~i~~QIl~aL~~LH~~-gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
|||+...+..+. ......+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+||+|||++..+...
T Consensus 82 ~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 82 MELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred EecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 999987544322 12335799999999999999999999975 9999999999999999999999999999765432
Q ss_pred CCCCcccccccccccCcccccCC--cccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcc
Q 006004 312 QNLPLTSRVVTLWYRAPELLLGA--TKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKS 389 (665)
Q Consensus 312 ~~~~~~~~~gT~~Y~APE~l~~~--~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~ 389 (665)
.. .....|++.|+|||++.+. ..++.++|||||||++|+|++|++||..... ....+.+.........
T Consensus 162 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~~~------ 231 (288)
T cd06616 162 IA--KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKGDPPIL------ 231 (288)
T ss_pred Cc--cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCCCCCcC------
Confidence 21 2334678999999999764 3689999999999999999999999976542 2222222111110000
Q ss_pred ccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCC
Q 006004 390 AHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKT 445 (665)
Q Consensus 390 ~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~ 445 (665)
+ ......++..+.+||.+||..||.+|||+.+++.||||..
T Consensus 232 ----------~-----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 272 (288)
T cd06616 232 ----------S-----NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD 272 (288)
T ss_pred ----------C-----CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence 0 0111357889999999999999999999999999999975
No 227
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.7e-39 Score=334.43 Aligned_cols=257 Identities=28% Similarity=0.501 Sum_probs=211.3
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCC---CCCcceeeeeeeccCCcEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLD---HPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~---HpnIV~l~~~~~~~~~~l~l 235 (665)
.|++++.||+|+||.||+|.+..+++.||+|.++... .......+.+|+.+++.+. ||||+++++++.... .+|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~-~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGP-RLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCC-EEEE
Confidence 4888999999999999999999999999999987543 2344566789999999996 999999999987654 7899
Q ss_pred EEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 236 VFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 236 V~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||||+.++.+..+...+ .+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++..+..... .
T Consensus 80 v~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-~ 157 (277)
T cd06917 80 IMEYAEGGSVRTLMKAG-PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS-K 157 (277)
T ss_pred EEecCCCCcHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc-c
Confidence 99999886665555444 799999999999999999999999999999999999999999999999999987754332 2
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
.....|+..|+|||.+.+...++.++|+|||||++|+|++|.+||.+.+.......+... .
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~-------------------~ 218 (277)
T cd06917 158 RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS-------------------K 218 (277)
T ss_pred cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC-------------------C
Confidence 334578999999999876566789999999999999999999999876544333221110 0
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
.+..+ ...++.++.+||.+||..||.+|||+.+++.|+||+..
T Consensus 219 ~~~~~--------~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~ 261 (277)
T cd06917 219 PPRLE--------DNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAH 261 (277)
T ss_pred CCCCC--------cccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhcc
Confidence 00000 11377889999999999999999999999999999864
No 228
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2e-39 Score=336.38 Aligned_cols=254 Identities=28% Similarity=0.415 Sum_probs=203.0
Q ss_pred eeccCceEEEEEEECCCCcEEEEEEEecCCCC-HHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEeccccc
Q 006004 166 IGQGTYSSVYKARDLETGKIVALKKVRFANMD-PESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEHDL 244 (665)
Q Consensus 166 LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~-~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g~l 244 (665)
||+|+||+||+|.+..+|+.||+|++...... ......+.+|+++|++++||||+++++++.... .+|+||||++++.
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKD-DLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCC-eEEEEEecCCCCc
Confidence 68999999999999999999999998754332 223445678999999999999999999988754 7899999999765
Q ss_pred hhhhcCC-C-CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccccccc
Q 006004 245 AGLATTP-G-IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVVT 322 (665)
Q Consensus 245 l~~~~~~-~-~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~gT 322 (665)
+...... . ..+++.++..++.||+.||.|||+.||+|+||+|+|||+++++.+||+|||++...... .......++
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~ 157 (277)
T cd05577 80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG--KKIKGRAGT 157 (277)
T ss_pred HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC--CccccccCC
Confidence 5443322 2 36999999999999999999999999999999999999999999999999998765432 222345678
Q ss_pred ccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcch
Q 006004 323 LWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYK 402 (665)
Q Consensus 323 ~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~ 402 (665)
..|+|||++.+ ..++.++|+|||||++|+|++|+.||...+.......+....-.
T Consensus 158 ~~y~~PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------------------ 212 (277)
T cd05577 158 PGYMAPEVLQG-EVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE------------------------ 212 (277)
T ss_pred CCcCCHHHhcC-CCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc------------------------
Confidence 89999999876 45899999999999999999999999876542222222111000
Q ss_pred hhhhhhccCCcHHHHHHHHHhcccCcCCCc-----CHHHHHhCcCCCCCCC
Q 006004 403 RKVLETFRNFPQSALALVDKLLTIEPENRG-----SAASALRSEFFKTEPL 448 (665)
Q Consensus 403 ~~~~~~~~~~s~~a~dLI~~lL~~DP~~Rp-----Ta~eaL~Hp~f~~~~~ 448 (665)
........+++.+.+||.+||..||.+|| ++.++++||||+...+
T Consensus 213 -~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~ 262 (277)
T cd05577 213 -MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNW 262 (277)
T ss_pred -ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCCh
Confidence 00112235789999999999999999999 9999999999986543
No 229
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=4.3e-39 Score=336.76 Aligned_cols=243 Identities=19% Similarity=0.202 Sum_probs=201.6
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCCC-HHHHHHHHHHHHHHHhCCCCCcceeeeeeec--c-CCcEEEEEEe
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANMD-PESVRFMAREIHILRKLDHPNVMKLEGLVTS--R-SGSLYLVFEY 239 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~-~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~--~-~~~l~lV~Ey 239 (665)
..||+|+++.||+|.. +|+.||||+++..... ....+.+.+|+.+|++++|||||++++++.+ . ...+++||||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 5789999999999987 7899999999765432 3335678899999999999999999998876 2 3468999999
Q ss_pred ccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhC-CccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccc
Q 006004 240 MEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSR-GILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTS 318 (665)
Q Consensus 240 ~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~-gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~ 318 (665)
+.++.+..+......+++.....++.|++.||.|||.. +++||||||+|||++.++.+||+|||++..+.... ..
T Consensus 104 ~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~----~~ 179 (283)
T PHA02988 104 CTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP----FK 179 (283)
T ss_pred CCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc----cc
Confidence 99876666655556799999999999999999999984 99999999999999999999999999998654321 23
Q ss_pred ccccccccCcccccCC-cccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCC
Q 006004 319 RVVTLWYRAPELLLGA-TKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKP 397 (665)
Q Consensus 319 ~~gT~~Y~APE~l~~~-~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~ 397 (665)
.++|..|+|||++.+. ..++.++|||||||++|||++|+.||.+.+..+....+......+.
T Consensus 180 ~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~----------------- 242 (283)
T PHA02988 180 NVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLK----------------- 242 (283)
T ss_pred ccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC-----------------
Confidence 4689999999998652 5789999999999999999999999998887766666543211110
Q ss_pred CCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 398 QQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 398 ~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.....++.+.+||.+||+.||.+|||+.++|+
T Consensus 243 ----------~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 243 ----------LPLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred ----------CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 01246888999999999999999999999986
No 230
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2e-39 Score=337.56 Aligned_cols=264 Identities=25% Similarity=0.361 Sum_probs=211.1
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
.++|++++.||+|+||+||++.+..+|+.||+|++.... .......+.+|+++++.++||||+++++++.... .+|+|
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~~lv 81 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNEN-NICMC 81 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCC-EEEEE
Confidence 357999999999999999999999999999999987543 2344567889999999999999999999998764 79999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHh-CCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHS-RGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~-~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
|||+.++.+..+......+++..+..++.||+.||.|||+ .|++|+||||+|||+++++.++|+|||++.......
T Consensus 82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~--- 158 (284)
T cd06620 82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI--- 158 (284)
T ss_pred EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc---
Confidence 9999987776665555679999999999999999999997 599999999999999999999999999987653221
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHH----HHHHHHhcCCCChhHHhhhcccc
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQ----MHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~----l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
.....|+..|+|||++.+ ..++.++|+|||||++|+|++|..||......+. ...+.. .+.....
T Consensus 159 ~~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~-- 227 (284)
T cd06620 159 ADTFVGTSTYMSPERIQG-GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILD--------LLQQIVQ-- 227 (284)
T ss_pred cCccccCcccCCHHHHcc-CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHH--------HHHHHhh--
Confidence 123578999999999876 5788999999999999999999999986554211 111110 0000000
Q ss_pred ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 392 ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 392 ~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
...+..+ ...++..+.+||.+||.+||.+|||+.++++|+||...
T Consensus 228 --~~~~~~~--------~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 228 --EPPPRLP--------SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred --ccCCCCC--------chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 0000000 01367889999999999999999999999999999753
No 231
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=4.1e-39 Score=328.26 Aligned_cols=254 Identities=30% Similarity=0.523 Sum_probs=208.9
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+|++.+.||+|+||.||++.+..+|..||+|.+..........+.+.+|+++++.++|+||+++++.+.... .+|+|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~-~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENG-RLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCC-eEEEEEe
Confidence 489999999999999999999999999999999765444444566789999999999999999999887754 7999999
Q ss_pred eccccchh-hhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCC-cEEEEecccceecCCCCCCC
Q 006004 239 YMEHDLAG-LATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAG-VLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 239 y~~g~ll~-~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g-~lKL~DFGlA~~~~~~~~~~ 315 (665)
|+.+..+. .+.. .+..+++..+..++.||+.||.|||+.+|+|+||||+|||++.++ .+||+|||++........ .
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~-~ 158 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME-L 158 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcc-c
Confidence 99875444 3333 233589999999999999999999999999999999999999886 469999999987643322 2
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
.....|++.|+|||++.+ ..++.++|+|||||++|+|++|..||...+..+....+....
T Consensus 159 ~~~~~~~~~~~ape~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------------------- 218 (257)
T cd08225 159 AYTCVGTPYYLSPEICQN-RPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGY------------------- 218 (257)
T ss_pred ccccCCCccccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccc-------------------
Confidence 233468999999998876 568899999999999999999999998876655544432210
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.......++.++.++|.+||..+|++|||+.++|+||||
T Consensus 219 ---------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 219 ---------FAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred ---------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 001123578889999999999999999999999999997
No 232
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.9e-39 Score=333.12 Aligned_cols=255 Identities=33% Similarity=0.518 Sum_probs=212.0
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCC-CCCcceeeeeeeccCCcEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLD-HPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~~l~l 235 (665)
++|++.+.||+|+||.||++++..+|+.||+|++..... .......+.+|+.+++++. ||||+++++++.... .+|+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~-~~~l 79 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEE-NLYF 79 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCc-eEEE
Confidence 369999999999999999999999999999999876433 2344566889999999998 999999999887654 7899
Q ss_pred EEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC--
Q 006004 236 VFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN-- 313 (665)
Q Consensus 236 V~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~-- 313 (665)
||||+.++.+..+......+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++........
T Consensus 80 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~ 159 (280)
T cd05581 80 VLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPE 159 (280)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccc
Confidence 999996654444444445799999999999999999999999999999999999999999999999999987643321
Q ss_pred -----------------CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhc
Q 006004 314 -----------------LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLC 376 (665)
Q Consensus 314 -----------------~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~ 376 (665)
.......++..|+|||++.. ..++.++|+|||||++++|++|+.||...+....+..+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~ 238 (280)
T cd05581 160 SNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE-KPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLE 238 (280)
T ss_pred cCCCCCccccccccccccccccccCCccccCHHHhCC-CCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcC
Confidence 12233467899999998876 568899999999999999999999999887665555543211
Q ss_pred CCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCH----HHHHhCcCC
Q 006004 377 GSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSA----ASALRSEFF 443 (665)
Q Consensus 377 g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa----~eaL~Hp~f 443 (665)
. .....+++.+.+||.+||..||.+|||+ .++|+||||
T Consensus 239 ~-----------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 239 Y-----------------------------SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred C-----------------------------CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 0 1113468889999999999999999999 999999998
No 233
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.1e-39 Score=340.93 Aligned_cols=259 Identities=27% Similarity=0.467 Sum_probs=213.2
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
-|.....||+|+||.||++.+..+++.||+|.+..... .....+.+|+.+++.++||||+++++++.... .+|+|||
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~-~~~iv~e 98 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGE-ELWVLME 98 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc--chHHHHHHHHHHHHhCCCCchhhhhhheeeCC-eEEEEEe
Confidence 36666789999999999999999999999999875432 23455789999999999999999999988754 7899999
Q ss_pred eccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccc
Q 006004 239 YMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTS 318 (665)
Q Consensus 239 y~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~ 318 (665)
|+.++.+..+... ..+++.+++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++..+.... .....
T Consensus 99 ~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~~ 176 (297)
T cd06659 99 FLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRKS 176 (297)
T ss_pred cCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhccccc-ccccc
Confidence 9998766655543 368999999999999999999999999999999999999999999999999987654322 12234
Q ss_pred ccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCC
Q 006004 319 RVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQ 398 (665)
Q Consensus 319 ~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~ 398 (665)
..+++.|+|||++.+ ..++.++|||||||++|+|++|++||...+..+.+..+... +..
T Consensus 177 ~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~~----------------- 235 (297)
T cd06659 177 LVGTPYWMAPEVISR-TPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS---PPP----------------- 235 (297)
T ss_pred eecCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcc---CCC-----------------
Confidence 578999999999876 56899999999999999999999999887766665544221 000
Q ss_pred CcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCCC
Q 006004 399 QPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPLP 449 (665)
Q Consensus 399 ~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~~ 449 (665)
.......++..+.+||.+||..||.+||++.++++||||.....+
T Consensus 236 ------~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~~ 280 (297)
T cd06659 236 ------KLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGLP 280 (297)
T ss_pred ------CccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCCc
Confidence 001123577889999999999999999999999999999876543
No 234
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=9.4e-39 Score=323.99 Aligned_cols=254 Identities=34% Similarity=0.521 Sum_probs=213.5
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+|++.+.||.|+||.||++.+..++..||+|++............+.+|+++++.++|||++++++.+... ..+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~-~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK-GKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC-CEEEEEEE
Confidence 48999999999999999999999999999999987665556677788999999999999999999998876 48999999
Q ss_pred eccccchh-hhcCC---CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC
Q 006004 239 YMEHDLAG-LATTP---GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL 314 (665)
Q Consensus 239 y~~g~ll~-~~~~~---~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~ 314 (665)
|+++..+. .+... +..+++.++..++.||+.||.|||++|++|+||+|+|||++.++.++|+|||++....... .
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-~ 158 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV-D 158 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc-c
Confidence 99975444 44332 3679999999999999999999999999999999999999999999999999998765432 1
Q ss_pred CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccC
Q 006004 315 PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATS 394 (665)
Q Consensus 315 ~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~ 394 (665)
......+++.|+|||.+.+ ..++.++|+||+|+++|+|++|..||...+..+....+.....
T Consensus 159 ~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~----------------- 220 (258)
T cd08215 159 LAKTVVGTPYYLSPELCQN-KPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY----------------- 220 (258)
T ss_pred eecceeeeecccChhHhcc-CCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCC-----------------
Confidence 2234578999999998876 5688999999999999999999999987765544444322100
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
......++..+.++|.+||..||.+|||+.++|+||||
T Consensus 221 -----------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 221 -----------PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred -----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 00112578899999999999999999999999999998
No 235
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=5.9e-39 Score=333.94 Aligned_cols=253 Identities=24% Similarity=0.387 Sum_probs=199.0
Q ss_pred EeeccCceEEEEEEECCCCcEEEEEEEecCCCCH-HHHHHHHHH---HHHHHhCCCCCcceeeeeeeccCCcEEEEEEec
Q 006004 165 KIGQGTYSSVYKARDLETGKIVALKKVRFANMDP-ESVRFMARE---IHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYM 240 (665)
Q Consensus 165 ~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~-~~~~~~~~E---i~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~ 240 (665)
.||+|+||.||+|++..+++.||+|.+....... .....+..| +.+++.+.||||+++++++.... .+|+||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~v~e~~ 79 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD-KLSFILDLM 79 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC-EEEEEEecC
Confidence 3899999999999999999999999987654321 111122333 34455568999999999988765 789999999
Q ss_pred cccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccccc
Q 006004 241 EHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRV 320 (665)
Q Consensus 241 ~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~ 320 (665)
.|+.+..+......+++.+++.++.||+.||.|||+.+|+||||||+|||++.++.+||+|||++..+.... ....+
T Consensus 80 ~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---~~~~~ 156 (278)
T cd05606 80 NGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PHASV 156 (278)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC---CcCcC
Confidence 987666555555679999999999999999999999999999999999999999999999999987654322 23457
Q ss_pred ccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCc
Q 006004 321 VTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQP 400 (665)
Q Consensus 321 gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p 400 (665)
|+..|+|||++.+...++.++||||+||++|+|++|+.||.+............... .
T Consensus 157 ~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~--------------------- 214 (278)
T cd05606 157 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT-M--------------------- 214 (278)
T ss_pred CCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhc-c---------------------
Confidence 899999999997655689999999999999999999999987632211111000000 0
Q ss_pred chhhhhhhccCCcHHHHHHHHHhcccCcCCCc-----CHHHHHhCcCCCCCC
Q 006004 401 YKRKVLETFRNFPQSALALVDKLLTIEPENRG-----SAASALRSEFFKTEP 447 (665)
Q Consensus 401 ~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~Rp-----Ta~eaL~Hp~f~~~~ 447 (665)
.......++..+.+||.+||..||.+|+ ++.++++||||+...
T Consensus 215 ----~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 215 ----AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred ----CCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 0011234688999999999999999999 999999999998753
No 236
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=4e-39 Score=334.13 Aligned_cols=252 Identities=23% Similarity=0.360 Sum_probs=205.0
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCC-----cEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCc
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETG-----KIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGS 232 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g-----~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~ 232 (665)
.+|++++.||+|+||.||+|.+...+ ..||+|.++... .......+.+|+.++++++||||+++++++.... .
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~-~ 82 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA-EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ-P 82 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC-CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC-c
Confidence 46999999999999999999976655 689999987443 3445567889999999999999999999987654 7
Q ss_pred EEEEEEeccccchh-hhcCCC---------------CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCc
Q 006004 233 LYLVFEYMEHDLAG-LATTPG---------------IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGV 296 (665)
Q Consensus 233 l~lV~Ey~~g~ll~-~~~~~~---------------~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~ 296 (665)
.|++|||+.++.+. .+.... ..+++.++..++.||+.||.|||++||+|+||||+|||+++++.
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLT 162 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCc
Confidence 89999999875443 332211 45888999999999999999999999999999999999999999
Q ss_pred EEEEecccceecCCCCC-CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 006004 297 LKIGDFGLATTYDPSQN-LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFK 374 (665)
Q Consensus 297 lKL~DFGlA~~~~~~~~-~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~ 374 (665)
+||+|||++........ .......+++.|+|||.+.+ ..++.++|||||||++|||++ |..||.+.+..+....+..
T Consensus 163 ~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~ 241 (283)
T cd05048 163 VKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILY-GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRS 241 (283)
T ss_pred EEECCCcceeeccccccccccCCCcccccccCHHHhcc-CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 99999999986533221 12234466889999999876 568999999999999999998 9999998877666555433
Q ss_pred hcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 375 LCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 375 ~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
... ......+++++.+||.+||+.||.+|||+.+++++
T Consensus 242 ~~~----------------------------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 242 RQL----------------------------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred CCc----------------------------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 110 01123678999999999999999999999999875
No 237
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.2e-38 Score=337.65 Aligned_cols=255 Identities=29% Similarity=0.495 Sum_probs=214.6
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
.|..+++||+|+||.||+|++..++..||+|++..... .......+.+|+.+++.++||||+++++++.+.. ..|+||
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~ 100 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEH-TAWLVM 100 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCC-EEEEEE
Confidence 47788899999999999999999999999999875433 3345567889999999999999999999998765 789999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
||+.++++..+......+++.++..++.||+.||.|||++||+|+||+|+||+++.++.+||+|||++..... ..
T Consensus 101 e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-----~~ 175 (313)
T cd06633 101 EYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP-----AN 175 (313)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC-----CC
Confidence 9999988877776666799999999999999999999999999999999999999999999999999865322 23
Q ss_pred cccccccccCcccccC--CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 318 SRVVTLWYRAPELLLG--ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~--~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
...|+..|+|||++.. ...++.++|||||||++|+|++|.+||...+....+..+.... .+
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~-~~---------------- 238 (313)
T cd06633 176 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQND-SP---------------- 238 (313)
T ss_pred CccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC-CC----------------
Confidence 4578999999999852 3567889999999999999999999998887666665543210 00
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
. .....++..+.+||.+||+++|.+||++.++|.||||...
T Consensus 239 --~--------~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~ 279 (313)
T cd06633 239 --T--------LQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRD 279 (313)
T ss_pred --C--------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence 0 0112467789999999999999999999999999999863
No 238
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=6.9e-39 Score=337.11 Aligned_cols=258 Identities=20% Similarity=0.278 Sum_probs=198.9
Q ss_pred CCeeEEEEeeccCceEEEEEEECC----------------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcce
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLE----------------TGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMK 221 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~----------------~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~ 221 (665)
++|++.++||+|+||.||+|++.. ++..||+|+++... .......+.+|+.+|.+++||||++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 479999999999999999998532 34579999987543 3445567889999999999999999
Q ss_pred eeeeeeccCCcEEEEEEeccccchhhhcCC-------------------CCCCChhHHHHHHHHHHHHHHHHHhCCcccc
Q 006004 222 LEGLVTSRSGSLYLVFEYMEHDLAGLATTP-------------------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHR 282 (665)
Q Consensus 222 l~~~~~~~~~~l~lV~Ey~~g~ll~~~~~~-------------------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHr 282 (665)
+++++.... .+|+||||+.++.+..+... ...+++.++..++.||+.||.|||+.||+||
T Consensus 84 ~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~ 162 (304)
T cd05096 84 LLGVCVDED-PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHR 162 (304)
T ss_pred EEEEEecCC-ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 999988754 78999999987544332211 1246788899999999999999999999999
Q ss_pred CCCcccEEEcCCCcEEEEecccceecCCCCCC-CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh--CCCC
Q 006004 283 DIKGSNLLINNAGVLKIGDFGLATTYDPSQNL-PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA--GKPI 359 (665)
Q Consensus 283 DLKPeNILld~~g~lKL~DFGlA~~~~~~~~~-~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt--G~~p 359 (665)
||||+|||++.++.+||+|||++..+...... ......++..|+|||++.+ ..++.++|||||||++|+|++ +..|
T Consensus 163 dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 163 DLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILM-GKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred CcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhc-CCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999876433221 1123345788999999876 568999999999999999986 5678
Q ss_pred CCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 360 MPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 360 F~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
|.+.+..+.+..+......... ..+ .......+..+.+||.+||..||.+|||+.++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~-----------~~~----------~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 242 YGELTDEQVIENAGEFFRDQGR-----------QVY----------LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred CCcCCHHHHHHHHHHHhhhccc-----------ccc----------ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 8877666555544321100000 000 0011356788999999999999999999999954
No 239
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=8.6e-39 Score=326.76 Aligned_cols=255 Identities=34% Similarity=0.494 Sum_probs=212.6
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+|++.+.||+|++|.||+|++..+++.||+|++...... .....+.+|+.++.+++|+||+++++++... ..+|+|||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~lv~e 79 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKE-GEISIVLE 79 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccC-CeEEEEEE
Confidence 699999999999999999999999999999998765432 4566788999999999999999999998875 47999999
Q ss_pred eccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHh-CCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 239 YMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHS-RGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 239 y~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~-~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
|+.++.+..+......+++..+..++.||+.||.|||+ .|++|+||+|+||+++.++.++|+|||++..+..... ...
T Consensus 80 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~-~~~ 158 (264)
T cd06623 80 YMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD-QCN 158 (264)
T ss_pred ecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCC-ccc
Confidence 99976666555544679999999999999999999999 9999999999999999999999999999987654332 123
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCC---hHHHHHHHHHhcCCCChhHHhhhccccccC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRT---EVEQMHKIFKLCGSPSEDYWRKSKSAHATS 394 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~---~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~ 394 (665)
...++..|+|||.+.+ ..++.++|+||||+++|+|++|.+||...+ ..+....+.. ...
T Consensus 159 ~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~---~~~-------------- 220 (264)
T cd06623 159 TFVGTVTYMSPERIQG-ESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD---GPP-------------- 220 (264)
T ss_pred ceeecccccCHhhhCC-CCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc---CCC--------------
Confidence 4568899999999876 578899999999999999999999998774 2222222211 000
Q ss_pred CCCCCcchhhhhhhccC-CcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCC
Q 006004 395 FKPQQPYKRKVLETFRN-FPQSALALVDKLLTIEPENRGSAASALRSEFFKT 445 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~-~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~ 445 (665)
...... ++..+.+||.+||..+|.+|||+.++|+||||+.
T Consensus 221 -----------~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~ 261 (264)
T cd06623 221 -----------PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKK 261 (264)
T ss_pred -----------CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHh
Confidence 001123 7889999999999999999999999999999975
No 240
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.7e-38 Score=322.32 Aligned_cols=254 Identities=30% Similarity=0.519 Sum_probs=214.6
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+|++.+.||+|++|.||++++..+++.||+|.+............+.+|++++++++||||+++++++... ..+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS-DSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeC-CEEEEEEe
Confidence 48899999999999999999999999999999987665556677889999999999999999999998775 47899999
Q ss_pred eccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccc
Q 006004 239 YMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTS 318 (665)
Q Consensus 239 y~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~ 318 (665)
|+.+..+..+......+++..+..++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++......... ...
T Consensus 80 ~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-~~~ 158 (254)
T cd06627 80 YAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD-DAS 158 (254)
T ss_pred cCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc-ccc
Confidence 9998666655555568999999999999999999999999999999999999999999999999999887543321 234
Q ss_pred ccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCC
Q 006004 319 RVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQ 398 (665)
Q Consensus 319 ~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~ 398 (665)
..++..|+|||.+.+ ..++.++||||||+++|+|++|..||...+....+.++... . .
T Consensus 159 ~~~~~~y~~pe~~~~-~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--------------~----~--- 216 (254)
T cd06627 159 VVGTPYWMAPEVIEM-SGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD--------------D----H--- 216 (254)
T ss_pred cccchhhcCHhhhcC-CCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc--------------C----C---
Confidence 467999999998876 45889999999999999999999999877654444433210 0 0
Q ss_pred CcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 399 QPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 399 ~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
......++..+.+||.+||..||++|||+.++|.||||
T Consensus 217 -------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 217 -------PPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred -------CCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 01123578899999999999999999999999999998
No 241
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=6.2e-39 Score=332.71 Aligned_cols=255 Identities=28% Similarity=0.474 Sum_probs=211.9
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
.|+.++.||.|+||.||+|.+..++..||||.+..... ......+.+|+.++++++||||+++++++.+.. .+|+|||
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e 82 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGT-KLWIIME 82 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC-EEEEEEe
Confidence 58889999999999999999999999999999875432 344567889999999999999999999988754 8999999
Q ss_pred eccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccc
Q 006004 239 YMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTS 318 (665)
Q Consensus 239 y~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~ 318 (665)
|+.++.+..+... .++++.++..++.||+.||.|||+.+++|+||+|+|||++.++.++|+|||++..+.... .....
T Consensus 83 ~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~ 160 (277)
T cd06640 83 YLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKRNT 160 (277)
T ss_pred cCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc-ccccc
Confidence 9998665555444 368999999999999999999999999999999999999999999999999998764322 12234
Q ss_pred ccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCC
Q 006004 319 RVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQ 398 (665)
Q Consensus 319 ~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~ 398 (665)
..++..|+|||++.+ ..++.++|+|||||++|+|++|.+||...+.......+... . .+
T Consensus 161 ~~~~~~y~apE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~--~-----------------~~- 219 (277)
T cd06640 161 FVGTPFWMAPEVIQQ-SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKN--N-----------------PP- 219 (277)
T ss_pred ccCcccccCHhHhcc-CCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcC--C-----------------CC-
Confidence 467899999999876 56899999999999999999999999877655444332110 0 00
Q ss_pred CcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 399 QPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 399 ~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
.....++..+.+||.+||..||.+||++.++|+|+||...
T Consensus 220 --------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06640 220 --------TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 259 (277)
T ss_pred --------CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhc
Confidence 1122467889999999999999999999999999999764
No 242
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.1e-38 Score=325.81 Aligned_cols=250 Identities=25% Similarity=0.446 Sum_probs=207.1
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+|++.+.||.|+||.||++++..+++.||+|.++.... ....+.+.+|+.+++.++|+||+++++++.... .+|+|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADG-HLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECC-EEEEEEe
Confidence 48999999999999999999999999999999875432 345567789999999999999999999998754 8999999
Q ss_pred ecccc-chhhhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 239 YMEHD-LAGLATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 239 y~~g~-ll~~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|+.++ +...+.. .+..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++....... ...
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-~~~ 157 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG-AYA 157 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccc-ccc
Confidence 99864 5444433 34468999999999999999999999999999999999999999999999999998764322 122
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFK 396 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~ 396 (665)
....+++.|+|||++.+ ..++.++|+|||||++|+|++|.+||...+....+..+......
T Consensus 158 ~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------------ 218 (255)
T cd08219 158 CTYVGTPYYVPPEIWEN-MPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYK------------------ 218 (255)
T ss_pred ccccCCccccCHHHHcc-CCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCC------------------
Confidence 34578999999999876 56899999999999999999999999887765555544321100
Q ss_pred CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 397 PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 397 ~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
.....++..+.+||.+||+.||++|||+.++|.-
T Consensus 219 ----------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 ----------PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ----------CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 0112467889999999999999999999999863
No 243
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.1e-38 Score=332.96 Aligned_cols=257 Identities=27% Similarity=0.485 Sum_probs=212.4
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
.|...+.||+|++|.||++.+..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+ ..|+|+|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~-~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK--QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGD-ELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCC-eEEEEEe
Confidence 4666789999999999999999999999999986432 233456789999999999999999999887654 7899999
Q ss_pred eccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccc
Q 006004 239 YMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTS 318 (665)
Q Consensus 239 y~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~ 318 (665)
|+.+..+..+... .++++.++..++.||+.||.|||++||+||||+|+|||++.++.++|+|||++........ ....
T Consensus 97 ~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~-~~~~ 174 (285)
T cd06648 97 FLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP-RRKS 174 (285)
T ss_pred ccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc-cccc
Confidence 9988666555544 4789999999999999999999999999999999999999999999999998876543221 1234
Q ss_pred ccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCC
Q 006004 319 RVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQ 398 (665)
Q Consensus 319 ~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~ 398 (665)
..|++.|+|||++.+ ..++.++|+|||||++|+|++|..||...+..+.+..+.... .+
T Consensus 175 ~~~~~~y~aPE~~~~-~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~-~~------------------- 233 (285)
T cd06648 175 LVGTPYWMAPEVISR-LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNL-PP------------------- 233 (285)
T ss_pred ccCCccccCHHHhcC-CCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcC-CC-------------------
Confidence 568999999999876 568999999999999999999999998877766666553310 00
Q ss_pred CcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCC
Q 006004 399 QPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEP 447 (665)
Q Consensus 399 ~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~ 447 (665)
.......++..+.+||.+||..||.+|||+.++|+||||....
T Consensus 234 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 276 (285)
T cd06648 234 ------KLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAG 276 (285)
T ss_pred ------CCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCC
Confidence 0001123778899999999999999999999999999998754
No 244
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=6.4e-39 Score=328.55 Aligned_cols=251 Identities=31% Similarity=0.432 Sum_probs=202.4
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCCC-HHHHHHHHHHHHHH-HhCCCCCcceeeeeeeccCCcEEEEEEecc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANMD-PESVRFMAREIHIL-RKLDHPNVMKLEGLVTSRSGSLYLVFEYME 241 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~-~~~~~~~~~Ei~iL-~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~ 241 (665)
+.||+|+||.||+|.+..+|+.||+|+++..... ......+..|..++ ..++|+||+++++++...+ .+|+||||+.
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-~~~lv~e~~~ 80 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKD-YLYLVMEYLN 80 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCC-eEEEEEeccC
Confidence 5799999999999999999999999998754332 22233445565554 4458999999999998754 7999999999
Q ss_pred ccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccccc
Q 006004 242 HDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVV 321 (665)
Q Consensus 242 g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~g 321 (665)
++.+..+......+++.++..++.||+.||.|||+.||+|+||+|+|||++.++.+||+|||++..... .....+
T Consensus 81 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~~~~~~ 155 (260)
T cd05611 81 GGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----NKKFVG 155 (260)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc-----cccCCC
Confidence 876666655555799999999999999999999999999999999999999999999999999876532 123467
Q ss_pred cccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcc
Q 006004 322 TLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPY 401 (665)
Q Consensus 322 T~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~ 401 (665)
++.|+|||.+.+ ..++.++||||||+++|+|++|.+||...+..+....+...... +..
T Consensus 156 ~~~y~~pe~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----------------~~~---- 214 (260)
T cd05611 156 TPDYLAPETILG-VGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRIN----------------WPE---- 214 (260)
T ss_pred CcCccChhhhcC-CCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccC----------------CCC----
Confidence 899999999886 45899999999999999999999999887766555544321100 000
Q ss_pred hhhhhhhccCCcHHHHHHHHHhcccCcCCCcC---HHHHHhCcCCCCC
Q 006004 402 KRKVLETFRNFPQSALALVDKLLTIEPENRGS---AASALRSEFFKTE 446 (665)
Q Consensus 402 ~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT---a~eaL~Hp~f~~~ 446 (665)
.....+++.+.+||.+||..||++||| +.|+|.||||+..
T Consensus 215 -----~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 215 -----EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred -----cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence 111257899999999999999999995 5899999999864
No 245
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.7e-38 Score=331.44 Aligned_cols=262 Identities=27% Similarity=0.416 Sum_probs=207.0
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-CCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-SGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-~~~l~lV 236 (665)
++|+.++.||.|++|.||+|.+..+++.||+|.+..... ......+.+|++++++++||||++++++|... .+.+|+|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN-PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc-hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 469999999999999999999999999999999875432 24456688999999999999999999988654 3468999
Q ss_pred EEeccccchhhh----cCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC
Q 006004 237 FEYMEHDLAGLA----TTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 237 ~Ey~~g~ll~~~----~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~ 312 (665)
|||++++.+..+ ......+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 159 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL 159 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc
Confidence 999987544322 2334568999999999999999999999999999999999999999999999999987654322
Q ss_pred CCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHhcCCCChhHHhhh
Q 006004 313 NLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTE-----VEQMHKIFKLCGSPSEDYWRKS 387 (665)
Q Consensus 313 ~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~-----~e~l~kI~~~~g~p~~~~~~~~ 387 (665)
. ....++..|+|||.+.+ ..++.++|||||||++|+|++|..||..... .+....+... ....
T Consensus 160 ~---~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~----- 227 (287)
T cd06621 160 A---GTFTGTSFYMAPERIQG-KPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM---PNPE----- 227 (287)
T ss_pred c---ccccCCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC---Cchh-----
Confidence 1 23457889999998876 5789999999999999999999999986522 2222221110 0000
Q ss_pred ccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 388 KSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 388 ~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
. +.. ...-..+++.+.+||.+||..||.+|||+.|++.||||+..
T Consensus 228 -------~-~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 272 (287)
T cd06621 228 -------L-KDE------PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQ 272 (287)
T ss_pred -------h-ccC------CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccc
Confidence 0 000 00001356789999999999999999999999999999753
No 246
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.2e-38 Score=338.08 Aligned_cols=255 Identities=28% Similarity=0.485 Sum_probs=214.4
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
.|+.++.||+|+||.||++++..++..||+|++..... ..+....+.+|+.+++.++||||+++++++.... ..|+||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~ 104 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREH-TAWLVM 104 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC-eEEEEE
Confidence 48899999999999999999999999999999875432 3445567889999999999999999999988755 789999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
||+.|+++..+.....++++.++..++.||+.||.|||++||+|+||+|+||+++.++.+||+|||++...... .
T Consensus 105 e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~-----~ 179 (317)
T cd06635 105 EYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA-----N 179 (317)
T ss_pred eCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCc-----c
Confidence 99999887777665667999999999999999999999999999999999999999999999999998765432 2
Q ss_pred cccccccccCcccccC--CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 318 SRVVTLWYRAPELLLG--ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~--~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
...+++.|+|||++.. ...++.++|||||||++|+|++|.+||.+.+....+..+......+
T Consensus 180 ~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~---------------- 243 (317)
T cd06635 180 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPT---------------- 243 (317)
T ss_pred cccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCC----------------
Confidence 3468899999999752 3467899999999999999999999998876666555554311000
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
.....+++.+.+||.+||..||.+|||+.++++|+|+...
T Consensus 244 -----------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 244 -----------LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred -----------CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 0012467789999999999999999999999999999653
No 247
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2e-38 Score=326.28 Aligned_cols=257 Identities=27% Similarity=0.452 Sum_probs=209.8
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCC---CCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-CCcE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFAN---MDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-SGSL 233 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~---~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-~~~l 233 (665)
.+|++.+.||+|+||.||+|++..+++.||+|.+.... ........+.+|+.++++++|+||+++++++.+. ...+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 36999999999999999999999999999999986432 1334566788999999999999999999988764 3468
Q ss_pred EEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC-
Q 006004 234 YLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ- 312 (665)
Q Consensus 234 ~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~- 312 (665)
++||||+.+..+.........+++..++.++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 161 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM 161 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence 9999999876555444444468999999999999999999999999999999999999999999999999998654211
Q ss_pred -CCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 313 -NLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 313 -~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
........++..|+|||++.+ ..++.++|+|||||++|+|++|++||......+.+.++.. .+...
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~--------- 228 (264)
T cd06653 162 SGTGIKSVTGTPYWMSPEVISG-EGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIAT---QPTKP--------- 228 (264)
T ss_pred cCccccccCCcccccCHhhhcC-CCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHc---CCCCC---------
Confidence 112234568999999999876 5678999999999999999999999987765554444321 11100
Q ss_pred ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 392 ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 392 ~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.....+++.+.++|.+||. +|.+|||+.++|.|||.
T Consensus 229 ---------------~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 229 ---------------MLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred ---------------CCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 1123688899999999999 57999999999999983
No 248
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=5.8e-39 Score=327.30 Aligned_cols=252 Identities=33% Similarity=0.474 Sum_probs=206.1
Q ss_pred eeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEeccccc
Q 006004 166 IGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEHDL 244 (665)
Q Consensus 166 LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g~l 244 (665)
||.|+||.||++++..+|+.||+|.+..... .......+.+|++++++++||||+++++.+.... .+|+||||+.++.
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKK-NLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCc-EEEEEEecCCCCc
Confidence 6899999999999999999999999875433 2345567889999999999999999999887654 7899999998755
Q ss_pred hhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC-------CCcc
Q 006004 245 AGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN-------LPLT 317 (665)
Q Consensus 245 l~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~-------~~~~ 317 (665)
+..+......+++..+..++.||+.||.|||++||+|+||+|+|||++.++.++|+|||++........ ....
T Consensus 80 L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~ 159 (265)
T cd05579 80 LASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDK 159 (265)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccccc
Confidence 544444434799999999999999999999999999999999999999999999999999876533211 1223
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKP 397 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~ 397 (665)
...++..|+|||.+.. ..++.++|+|||||++|+|++|..||...+..+....+... ...
T Consensus 160 ~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~--~~~----------------- 219 (265)
T cd05579 160 RIVGTPDYIAPEVILG-QGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNG--KIE----------------- 219 (265)
T ss_pred CcccCccccCHHHhcC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CcC-----------------
Confidence 3467889999999876 45789999999999999999999999888766655554331 000
Q ss_pred CCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCH---HHHHhCcCCCCC
Q 006004 398 QQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSA---ASALRSEFFKTE 446 (665)
Q Consensus 398 ~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa---~eaL~Hp~f~~~ 446 (665)
.+ ....++..+.+||.+||+.||.+|||+ .++|+||||+..
T Consensus 220 -~~-------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 220 -WP-------EDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred -CC-------ccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 00 001258899999999999999999999 999999999854
No 249
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3.6e-39 Score=346.16 Aligned_cols=254 Identities=24% Similarity=0.373 Sum_probs=201.4
Q ss_pred CCeeEEEEeeccCceEEEEEEECC-----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCC
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLE-----TGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSG 231 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~-----~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~ 231 (665)
++|++.+.||+|+||.||+|++.. +++.||+|+++... .....+.+.+|+.+++++ +|+||+++++++.....
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 479999999999999999997543 45789999987443 334456678899999999 89999999998876666
Q ss_pred cEEEEEEeccccchhhhcCC------------------------------------------------------------
Q 006004 232 SLYLVFEYMEHDLAGLATTP------------------------------------------------------------ 251 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~~~------------------------------------------------------------ 251 (665)
.+|++|||+.++.+..++..
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 89999999997555433211
Q ss_pred -CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC-CCcccccccccccCcc
Q 006004 252 -GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN-LPLTSRVVTLWYRAPE 329 (665)
Q Consensus 252 -~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~-~~~~~~~gT~~Y~APE 329 (665)
...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+..... .......++..|+|||
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE 245 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 245 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcH
Confidence 12688999999999999999999999999999999999999999999999999987643221 1223345577899999
Q ss_pred cccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhh
Q 006004 330 LLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLET 408 (665)
Q Consensus 330 ~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 408 (665)
++.+ ..++.++|||||||+||+|++ |..||.+....+.+....... .. . ..
T Consensus 246 ~~~~-~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~-----------------~---------~~ 297 (337)
T cd05054 246 SIFD-KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEG-TR-----------------M---------RA 297 (337)
T ss_pred HhcC-CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhcc-CC-----------------C---------CC
Confidence 9886 678999999999999999998 999998765444433332210 00 0 01
Q ss_pred ccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 409 FRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 409 ~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
....++++.+|+.+||+.+|++||++.++++|
T Consensus 298 ~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 298 PEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred CccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 12467889999999999999999999999975
No 250
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=4.2e-39 Score=343.21 Aligned_cols=282 Identities=25% Similarity=0.328 Sum_probs=205.5
Q ss_pred EEeecc--CceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEecc
Q 006004 164 DKIGQG--TYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYME 241 (665)
Q Consensus 164 ~~LG~G--~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~ 241 (665)
..||.| +||+||++++..+|+.||+|++.......+..+.+.+|+.+++.++||||++++++|.... .+|+||||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~-~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGS-WLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCC-ceEEEEeccc
Confidence 356666 9999999999999999999999876655666788899999999999999999999998765 7899999999
Q ss_pred ccchhhhcCC--CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC---C-
Q 006004 242 HDLAGLATTP--GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL---P- 315 (665)
Q Consensus 242 g~ll~~~~~~--~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~---~- 315 (665)
++.+..+... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+||+.+......... .
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVY 162 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccc
Confidence 7554444332 235899999999999999999999999999999999999999999999999865433211100 0
Q ss_pred --cccccccccccCcccccCC-cccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChh--HHhhhccc
Q 006004 316 --LTSRVVTLWYRAPELLLGA-TKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSED--YWRKSKSA 390 (665)
Q Consensus 316 --~~~~~gT~~Y~APE~l~~~-~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~--~~~~~~~~ 390 (665)
.....++..|+|||++.+. ..++.++|||||||++|+|++|.+||.+....+.+..+.......+.+ .+......
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (328)
T cd08226 163 DFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESR 242 (328)
T ss_pred cccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhh
Confidence 0112346679999998753 357899999999999999999999998877665554443321111100 00000000
Q ss_pred ----------------cccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 391 ----------------HATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 391 ----------------~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
.....................+++.+++||.+||..||.+|||+.++|+||||...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~ 314 (328)
T cd08226 243 MKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV 314 (328)
T ss_pred hccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence 00000000000000011123467889999999999999999999999999999753
No 251
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-39 Score=351.27 Aligned_cols=255 Identities=28% Similarity=0.468 Sum_probs=210.3
Q ss_pred ccCCccCCCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeec
Q 006004 149 IKGWQPRRADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTS 228 (665)
Q Consensus 149 ~~~~~~~~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~ 228 (665)
.+.|...+ ..+++++.||+|-||.||+|.+..+ ..||+|.++...+..+ .|.+|++||++|+|+|||++++++..
T Consensus 198 ~d~wei~r-~~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m~~~---~f~~Ea~iMk~L~H~~lV~l~gV~~~ 272 (468)
T KOG0197|consen 198 RDPWEIPR-EELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSMSPE---AFLREAQIMKKLRHEKLVKLYGVCTK 272 (468)
T ss_pred cCCeeecH-HHHHHHHHhcCCccceEEEEEEcCC-CcccceEEeccccChh---HHHHHHHHHHhCcccCeEEEEEEEec
Confidence 44554443 2488899999999999999998543 3699999987655433 36799999999999999999999987
Q ss_pred cCCcEEEEEEeccc-cchhhhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccce
Q 006004 229 RSGSLYLVFEYMEH-DLAGLATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLAT 306 (665)
Q Consensus 229 ~~~~l~lV~Ey~~g-~ll~~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~ 306 (665)
+. .+|||||||.. .|+..+.. .+..+...+...|+.||++|++||+++++|||||-..||||+++..+||+|||||+
T Consensus 273 ~~-piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr 351 (468)
T KOG0197|consen 273 QE-PIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLAR 351 (468)
T ss_pred CC-ceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEccccccc
Confidence 54 79999999985 56666665 46679999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHh
Q 006004 307 TYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWR 385 (665)
Q Consensus 307 ~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~ 385 (665)
....+........--...|.|||.+.- ..++.++|||||||+||||+| |+.|+++.+..+.+..+.+...-|
T Consensus 352 ~~~d~~Y~~~~~~kfPIkWtAPEa~~~-~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp------ 424 (468)
T KOG0197|consen 352 LIGDDEYTASEGGKFPIKWTAPEALNY-GKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLP------ 424 (468)
T ss_pred ccCCCceeecCCCCCCceecCHHHHhh-CCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCC------
Confidence 654443222222222456999999975 679999999999999999987 889999999999999986642222
Q ss_pred hhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHH
Q 006004 386 KSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASAL 438 (665)
Q Consensus 386 ~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL 438 (665)
.+...|+.+.+|+..|+..+|++|||.+.+.
T Consensus 425 ----------------------~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 425 ----------------------RPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred ----------------------CCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 2246899999999999999999999998554
No 252
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.5e-38 Score=370.52 Aligned_cols=149 Identities=30% Similarity=0.439 Sum_probs=131.8
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~l 235 (665)
.++|+++++||+|+||.||+|++..+++.||||+++.... .......+.+|+.+++.++||||+++++++.... .+||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~-~~~l 81 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSAN-NVYL 81 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECC-EEEE
Confidence 3579999999999999999999999999999999976443 4455677889999999999999999999887654 7999
Q ss_pred EEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccce
Q 006004 236 VFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLAT 306 (665)
Q Consensus 236 V~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~ 306 (665)
||||+.|+.+..++.....+++..++.|+.||+.||.|||.+||+||||||+||||+.++.+||+|||+++
T Consensus 82 VmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 82 VMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999876555454444578999999999999999999999999999999999999999999999999985
No 253
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.6e-38 Score=326.92 Aligned_cols=249 Identities=21% Similarity=0.333 Sum_probs=202.7
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+|.+.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.++||||+++++++.... .+++|||
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e 82 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITE 82 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc---hHHHHHHHHHHHHHhCCCCChhheEEEEcCCC-CcEEEEE
Confidence 5999999999999999999999999999999986432 23456789999999999999999999887654 7899999
Q ss_pred eccccchh-hhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 239 YMEHDLAG-LATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 239 y~~g~ll~-~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|+.++.+. .+.. ....+++..+..++.||+.||.|||++||+||||||+|||+++++.+||+|||++...........
T Consensus 83 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~ 162 (263)
T cd05052 83 FMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 162 (263)
T ss_pred eCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeecc
Confidence 99865444 4433 234589999999999999999999999999999999999999999999999999987654322111
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
....++..|+|||.+.+ ..++.++|||||||++|+|++ |..||++.+..+....+....
T Consensus 163 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~------------------- 222 (263)
T cd05052 163 AGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY------------------- 222 (263)
T ss_pred CCCCCccccCCHHHhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-------------------
Confidence 22234678999998876 578899999999999999998 999999877655544442210
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
.+ .....++..+.+||.+||..||++|||+.++++.
T Consensus 223 ~~---------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~ 258 (263)
T cd05052 223 RM---------ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQA 258 (263)
T ss_pred CC---------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 00 1123578999999999999999999999999863
No 254
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.3e-38 Score=336.47 Aligned_cols=256 Identities=29% Similarity=0.506 Sum_probs=213.4
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
..|..++.||+|+||.||++++..++..||+|.+..... .......+.+|+++++.++|+||+++++++.... ..|+|
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv 93 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH-TAWLV 93 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCC-eeEEE
Confidence 358889999999999999999999999999999875432 3344566789999999999999999999988754 78999
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
|||+.+.+...+......+++.++..++.||+.||.|||+.|++|+||||+|||++.++.+||+|||++......
T Consensus 94 ~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~----- 168 (308)
T cd06634 94 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----- 168 (308)
T ss_pred EEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc-----
Confidence 999998877776655667999999999999999999999999999999999999999999999999999876432
Q ss_pred ccccccccccCcccccC--CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccC
Q 006004 317 TSRVVTLWYRAPELLLG--ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATS 394 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~--~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~ 394 (665)
....+++.|+|||++.+ ...++.++|||||||++|+|++|..||...+..+....+.... .+
T Consensus 169 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~--------------- 232 (308)
T cd06634 169 NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE-SP--------------- 232 (308)
T ss_pred ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcC-CC---------------
Confidence 23467899999999852 2457889999999999999999999998766555444432210 00
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
......++..+.+||.+||..+|.+||++.+++.||||...
T Consensus 233 -----------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 233 -----------ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred -----------CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 00012577889999999999999999999999999999864
No 255
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.7e-38 Score=325.00 Aligned_cols=248 Identities=23% Similarity=0.364 Sum_probs=201.4
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++++.||+|+||.||++++. ++..+|+|.+...... ...+.+|+.+|++++||||+++++++.... .+|+||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~iv~ 78 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCTQQK-PLYIVT 78 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEccCC-CEEEEE
Confidence 46999999999999999999875 4567999988654433 245778999999999999999999987754 789999
Q ss_pred Eecccc-chhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 238 EYMEHD-LAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 238 Ey~~g~-ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
||+.++ +...+......+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++...........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05114 79 EFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSS 158 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceecc
Confidence 999865 4444444344689999999999999999999999999999999999999999999999999986543222222
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
....++..|+|||++.+ ..++.++|+|||||++|+|++ |++||...+..+.+..+......
T Consensus 159 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~----------------- 220 (256)
T cd05114 159 SGAKFPVKWSPPEVFNF-SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRL----------------- 220 (256)
T ss_pred CCCCCchhhCChhhccc-CccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCC-----------------
Confidence 22345668999999875 568999999999999999999 99999988877777766432100
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
......+..+.+||.+||..||.+||++.++++
T Consensus 221 -----------~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 221 -----------YRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred -----------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 001235678999999999999999999999986
No 256
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=3.4e-38 Score=319.30 Aligned_cols=258 Identities=33% Similarity=0.552 Sum_probs=212.0
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC-CcEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS-GSLYLVF 237 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~-~~l~lV~ 237 (665)
+|++.+.||+|++|.||+|.+..+++.|++|++..........+.+.+|+.++++++||||+++++.+.... ..+++||
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 488899999999999999999999999999999866554566778899999999999999999999887651 4789999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC-Cc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL-PL 316 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~-~~ 316 (665)
||+.+..+..+......+++.++..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+......... ..
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 160 (260)
T cd06606 81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGT 160 (260)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccc
Confidence 99977666555544448999999999999999999999999999999999999999999999999999887554321 12
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFK 396 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~ 396 (665)
....++..|+|||.+.+ ..++.++|+|||||++|+|++|..||..... ....+......
T Consensus 161 ~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~------------------ 219 (260)
T cd06606 161 GSVRGTPYWMAPEVIRG-EEYGRAADIWSLGCTVIEMATGKPPWSELGN--PMAALYKIGSS------------------ 219 (260)
T ss_pred cCCCCCccccCHhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--hHHHHHhcccc------------------
Confidence 34467899999998876 4589999999999999999999999987662 11222111100
Q ss_pred CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 397 PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 397 ~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.........++..+.+||.+||..||.+||++.++|+||||
T Consensus 220 ------~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 220 ------GEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred ------CCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 00011223568899999999999999999999999999997
No 257
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.4e-38 Score=326.12 Aligned_cols=249 Identities=22% Similarity=0.395 Sum_probs=202.9
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
.++|+++++||+|+||.||+|.+. ++..||+|.+.... ...+.+.+|+.++++++|+||+++++++.... .+|+|
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv 79 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT---MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEE-PIYII 79 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc---hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-CcEEE
Confidence 357999999999999999999964 56779999876433 23456889999999999999999999887654 78999
Q ss_pred EEecccc-chhhhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC
Q 006004 237 FEYMEHD-LAGLATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL 314 (665)
Q Consensus 237 ~Ey~~g~-ll~~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~ 314 (665)
|||+.++ +...+.. ....+++..+..++.||+.||.|||+.|++|+||||+|||++.++.+||+|||++.........
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05072 80 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT 159 (261)
T ss_pred EecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCcee
Confidence 9999864 4444433 3456899999999999999999999999999999999999999999999999999876543322
Q ss_pred CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccccc
Q 006004 315 PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHAT 393 (665)
Q Consensus 315 ~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~ 393 (665)
......++..|+|||++.+ ..++.++|||||||++|+|++ |+.||.+.+..+....+......
T Consensus 160 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~--------------- 223 (261)
T cd05072 160 AREGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRM--------------- 223 (261)
T ss_pred ccCCCccceecCCHHHhcc-CCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC---------------
Confidence 2233345778999999876 568899999999999999998 99999988776666555331100
Q ss_pred CCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 394 SFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 394 ~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.....++.++.+||.+||..||++|||+.++++
T Consensus 224 -------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 224 -------------PRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred -------------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 111357888999999999999999999999875
No 258
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.5e-38 Score=325.95 Aligned_cols=255 Identities=29% Similarity=0.416 Sum_probs=201.1
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
.+.....||+|+||.||+|++..++..||+|.+.... ....+.+.+|+.++++++|+||+++++++...+ .+|+|||
T Consensus 9 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e 85 (268)
T cd06624 9 ENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENG-FFKIFME 85 (268)
T ss_pred cCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCC-EEEEEEe
Confidence 4455578999999999999999999999999886543 334567889999999999999999999988754 7899999
Q ss_pred eccccchhh-hcCCCCCC--ChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcC-CCcEEEEecccceecCCCCCC
Q 006004 239 YMEHDLAGL-ATTPGIKF--TEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINN-AGVLKIGDFGLATTYDPSQNL 314 (665)
Q Consensus 239 y~~g~ll~~-~~~~~~~l--se~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~-~g~lKL~DFGlA~~~~~~~~~ 314 (665)
|+.+..+.. +......+ ++..+..++.||+.||.|||++||+||||||+|||++. ++.++|+|||++..+.... .
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~-~ 164 (268)
T cd06624 86 QVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN-P 164 (268)
T ss_pred cCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCC-C
Confidence 998755544 43333445 88899999999999999999999999999999999986 6799999999998654322 2
Q ss_pred CcccccccccccCcccccCC-cccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccccc
Q 006004 315 PLTSRVVTLWYRAPELLLGA-TKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHAT 393 (665)
Q Consensus 315 ~~~~~~gT~~Y~APE~l~~~-~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~ 393 (665)
......+++.|+|||++.+. ..++.++|+|||||++|+|++|++||................
T Consensus 165 ~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~----------------- 227 (268)
T cd06624 165 CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMF----------------- 227 (268)
T ss_pred ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhh-----------------
Confidence 22334679999999998653 347899999999999999999999997543221111000000
Q ss_pred CCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 394 SFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 394 ~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
+........+++++.+||.+||..+|.+|||+.+++.||||
T Consensus 228 ---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 228 ---------KIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred ---------ccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 00001123578899999999999999999999999999997
No 259
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=6.2e-39 Score=349.31 Aligned_cols=252 Identities=23% Similarity=0.342 Sum_probs=198.1
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCC-----cEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCC
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETG-----KIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSG 231 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g-----~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~ 231 (665)
++|++.+.||+|+||.||+|++..+| ..||||+++... .......+.+|+.+++.+ +|+|||++++++....
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~- 115 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA-HTDEREALMSELKILSHLGQHKNIVNLLGACTHGG- 115 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC-CHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC-
Confidence 47999999999999999999965444 579999997543 234456788999999999 8999999999987754
Q ss_pred cEEEEEEeccccchhhhc-C------------------------------------------------------------
Q 006004 232 SLYLVFEYMEHDLAGLAT-T------------------------------------------------------------ 250 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~-~------------------------------------------------------------ 250 (665)
.+|+||||+.++.+..+. .
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 789999999865443222 1
Q ss_pred ---------CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC-ccccc
Q 006004 251 ---------PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP-LTSRV 320 (665)
Q Consensus 251 ---------~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~-~~~~~ 320 (665)
...++++.++..++.||+.||.|||++||+||||||+|||+++++.+||+|||++..+....... .....
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~ 275 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNAR 275 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCC
Confidence 11247889999999999999999999999999999999999999999999999998764332211 11223
Q ss_pred ccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCC
Q 006004 321 VTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQ 399 (665)
Q Consensus 321 gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~ 399 (665)
+++.|+|||++.+ ..++.++|||||||++|+|++ |+.||........+..+..... ...
T Consensus 276 ~~~~y~aPE~~~~-~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~------------------~~~- 335 (374)
T cd05106 276 LPVKWMAPESIFD-CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGY------------------QMS- 335 (374)
T ss_pred CccceeCHHHhcC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHccc------------------Ccc-
Confidence 4678999999876 578999999999999999997 9999987654443333322100 000
Q ss_pred cchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 400 PYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 400 p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
....+++++.+||.+||+.||.+|||+.++++
T Consensus 336 --------~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 336 --------RPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred --------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 01236889999999999999999999999976
No 260
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8e-40 Score=354.57 Aligned_cols=260 Identities=32% Similarity=0.494 Sum_probs=217.3
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
-|..++.||-|+||+|.+++...|...||+|.+++... ....+..++.|..||..-+.+.||+||..|++.+ .+|+||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkd-nLYFVM 708 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD-NLYFVM 708 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCC-ceEEEE
Confidence 38899999999999999999999999999999987643 5566778889999999999999999999999976 799999
Q ss_pred Eeccc-cchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecC-------
Q 006004 238 EYMEH-DLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYD------- 309 (665)
Q Consensus 238 Ey~~g-~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~------- 309 (665)
+|+.| |++.++++-+ -|.|+.+++|+.+|.+|+++.|.+|+|||||||+|||||.+|++||.||||+.-+.
T Consensus 709 dYIPGGDmMSLLIrmg-IFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskY 787 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMG-IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 787 (1034)
T ss_pred eccCCccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceecccccc
Confidence 99986 5666666655 69999999999999999999999999999999999999999999999999996441
Q ss_pred --CCCCC--------------------------------CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh
Q 006004 310 --PSQNL--------------------------------PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA 355 (665)
Q Consensus 310 --~~~~~--------------------------------~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt 355 (665)
.+... ...+.+||+.|+|||+|.. ..|+..+|+||.|||||||+.
T Consensus 788 Yq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r-~g~~q~cdwws~gvil~em~~ 866 (1034)
T KOG0608|consen 788 YQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR-TGYTQLCDWWSVGVILYEMLV 866 (1034)
T ss_pred ccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc-cCccccchhhHhhHHHHHHhh
Confidence 10000 0124589999999999987 679999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC--
Q 006004 356 GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS-- 433 (665)
Q Consensus 356 G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT-- 433 (665)
|++||...+..+.-.+|.. |.+.. . +....++++++.+||.+|. -+++.|..
T Consensus 867 g~~pf~~~tp~~tq~kv~n---------w~~~l-----~-----------~~~~~~ls~e~~~li~kLc-~sad~RLGkn 920 (1034)
T KOG0608|consen 867 GQPPFLADTPGETQYKVIN---------WRNFL-----H-----------IPYQGNLSKEALDLIQKLC-CSADSRLGKN 920 (1034)
T ss_pred CCCCccCCCCCcceeeeee---------hhhcc-----c-----------cccccccCHHHHHHHHHHh-cChhhhhccc
Confidence 9999998887776666543 33211 0 1122478999999999876 46777864
Q ss_pred -HHHHHhCcCCCCCC
Q 006004 434 -AASALRSEFFKTEP 447 (665)
Q Consensus 434 -a~eaL~Hp~f~~~~ 447 (665)
++++..||||++..
T Consensus 921 g~d~vKaHpfFkgID 935 (1034)
T KOG0608|consen 921 GADQVKAHPFFKGID 935 (1034)
T ss_pred chhhhhcCccccccc
Confidence 78899999999864
No 261
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=353.90 Aligned_cols=263 Identities=23% Similarity=0.337 Sum_probs=229.0
Q ss_pred CCCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcE
Q 006004 155 RRADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSL 233 (665)
Q Consensus 155 ~~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l 233 (665)
....+++++..||-|+||.|-++........+|+|++++..+ +..+.+.+..|..||..++.|+||+||..|.+.. .+
T Consensus 417 v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~k-yv 495 (732)
T KOG0614|consen 417 VKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSK-YV 495 (732)
T ss_pred cchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccch-hh
Confidence 334578999999999999999998776666799999987654 5566778899999999999999999999998755 89
Q ss_pred EEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC
Q 006004 234 YLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 234 ~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~ 313 (665)
|++||-|-|+-+-.++...+.|.+..+++|+..+++|++|||++|||+|||||+|+||+.+|.+||.|||+|+.+..+..
T Consensus 496 YmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~K 575 (732)
T KOG0614|consen 496 YMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRK 575 (732)
T ss_pred hhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCc
Confidence 99999987654444445555899999999999999999999999999999999999999999999999999999876544
Q ss_pred CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccccc
Q 006004 314 LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHAT 393 (665)
Q Consensus 314 ~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~ 393 (665)
..++||||.|.|||++++ ...+.++|.||||+++||||+|.|||.+.++..++..|.+.+. .
T Consensus 576 --TwTFcGTpEYVAPEIILn-KGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid-----~---------- 637 (732)
T KOG0614|consen 576 --TWTFCGTPEYVAPEIILN-KGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGID-----K---------- 637 (732)
T ss_pred --eeeecCCcccccchhhhc-cCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhh-----h----------
Confidence 578999999999999997 5679999999999999999999999999999999999987531 1
Q ss_pred CCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC-----HHHHHhCcCCCCCCC
Q 006004 394 SFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS-----AASALRSEFFKTEPL 448 (665)
Q Consensus 394 ~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT-----a~eaL~Hp~f~~~~~ 448 (665)
.+.++.++..+.+||+++...+|.+|.. +.++-.|-||.+..+
T Consensus 638 ------------i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdw 685 (732)
T KOG0614|consen 638 ------------IEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDW 685 (732)
T ss_pred ------------hhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCCh
Confidence 1223578999999999999999999976 899999999976544
No 262
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2e-38 Score=328.83 Aligned_cols=255 Identities=30% Similarity=0.489 Sum_probs=211.2
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
-|++++.||.|+||.||++.+..++..||||.+..... ......+.+|+.++++++||||+++++++.... .+|+|||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e 82 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT-KLWIIME 82 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCC-eEEEEEE
Confidence 48889999999999999999999999999999865433 344567889999999999999999999988754 7999999
Q ss_pred eccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccc
Q 006004 239 YMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTS 318 (665)
Q Consensus 239 y~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~ 318 (665)
|+.++.+..+... ..+++..+..++.||+.||.|||+.|++|+||||+||+++.++.++|+|||++..+.... .....
T Consensus 83 ~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-~~~~~ 160 (277)
T cd06641 83 YLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKRNT 160 (277)
T ss_pred eCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccch-hhhcc
Confidence 9998666555543 368999999999999999999999999999999999999999999999999987764322 12233
Q ss_pred ccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCC
Q 006004 319 RVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQ 398 (665)
Q Consensus 319 ~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~ 398 (665)
..++..|+|||.+.+ ..++.++|+|||||++|+|++|..||...+.......+... .+ +
T Consensus 161 ~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~-----------------~- 219 (277)
T cd06641 161 FVGTPFWMAPEVIKQ-SAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN--NP-----------------P- 219 (277)
T ss_pred ccCCccccChhhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcC--CC-----------------C-
Confidence 467899999998875 56788999999999999999999999876654444433210 00 0
Q ss_pred CcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 399 QPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 399 ~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
.....++.++.++|.+||..||.+||++.++++||||...
T Consensus 220 --------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 220 --------TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred --------CCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 0113468889999999999999999999999999999864
No 263
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.7e-39 Score=335.08 Aligned_cols=254 Identities=27% Similarity=0.463 Sum_probs=209.1
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
.|+.++.||+|+||.||+|.+..++..||+|.+..... ......+.+|+.++++++||||+++++++.... .+|+|||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e 82 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGT-KLWIIME 82 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCCCCccHhhhcccccCC-ceEEEEE
Confidence 58888999999999999999999999999999875432 344567889999999999999999999988754 7999999
Q ss_pred eccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccc
Q 006004 239 YMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTS 318 (665)
Q Consensus 239 y~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~ 318 (665)
|+.++.+..+... ..+++..++.++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++..+.... .....
T Consensus 83 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-~~~~~ 160 (277)
T cd06642 83 YLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKRNT 160 (277)
T ss_pred ccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcc-hhhhc
Confidence 9998666555543 468999999999999999999999999999999999999999999999999998764322 12233
Q ss_pred ccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCC
Q 006004 319 RVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQ 398 (665)
Q Consensus 319 ~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~ 398 (665)
..++..|+|||++.+ ..++.++|+|||||++|+|++|++||...........+... ..+
T Consensus 161 ~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~-------------------~~~- 219 (277)
T cd06642 161 FVGTPFWMAPEVIKQ-SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN-------------------SPP- 219 (277)
T ss_pred ccCcccccCHHHhCc-CCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC-------------------CCC-
Confidence 467899999999876 56889999999999999999999999765544333222110 000
Q ss_pred CcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCC
Q 006004 399 QPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKT 445 (665)
Q Consensus 399 ~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~ 445 (665)
.....++..+.+||.+||..+|.+|||+.++|+||||..
T Consensus 220 --------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06642 220 --------TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR 258 (277)
T ss_pred --------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHH
Confidence 011246788999999999999999999999999999975
No 264
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2e-38 Score=322.59 Aligned_cols=252 Identities=29% Similarity=0.458 Sum_probs=211.1
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+|++.+.||+|+||.||++++..+++.||+|.+............+.+|+.+++.++|+||+++++++... ...|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG-NKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC-CEEEEEeh
Confidence 48999999999999999999999999999999987655555566778999999999999999999998875 47999999
Q ss_pred eccccchhhhcCC----CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC
Q 006004 239 YMEHDLAGLATTP----GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL 314 (665)
Q Consensus 239 y~~g~ll~~~~~~----~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~ 314 (665)
|+.+..+..+... ...+++..++.++.||+.||.|||+.|++|+||+|+||+++.++.+||+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--- 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN--- 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC---
Confidence 9987555433322 356899999999999999999999999999999999999999999999999999876543
Q ss_pred CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccC
Q 006004 315 PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATS 394 (665)
Q Consensus 315 ~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~ 394 (665)
......+++.|+|||.+.+ ..++.++|+||||+++|+|++|+.||...+..+....+.... .
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~-~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~--~--------------- 218 (256)
T cd08530 157 MAKTQIGTPHYMAPEVWKG-RPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGK--Y--------------- 218 (256)
T ss_pred CcccccCCccccCHHHHCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--C---------------
Confidence 1233467899999999876 668899999999999999999999998887655444432210 0
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
. .....++.+++++|.+||..+|.+|||+.++|+||+.
T Consensus 219 -~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 219 -P----------PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred -C----------CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 0 0112467889999999999999999999999999974
No 265
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-39 Score=354.14 Aligned_cols=252 Identities=31% Similarity=0.516 Sum_probs=206.3
Q ss_pred EeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEeccccc
Q 006004 165 KIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEHDL 244 (665)
Q Consensus 165 ~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g~l 244 (665)
.||+|+||+||.|+|..|....|||.|.... ...++-+..||.+.++|+|.|||++++.+.. ++.+-|+||-++|+.
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd--sr~~QPLhEEIaLH~~LrHkNIVrYLGs~se-nGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD--SREVQPLHEEIALHSTLRHKNIVRYLGSVSE-NGFFKIFMEQVPGGS 658 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccccc--chhhccHHHHHHHHHHHhhHhHHHHhhccCC-CCeEEEEeecCCCCc
Confidence 6999999999999999999999999986432 3456668899999999999999999998654 668899999999876
Q ss_pred hh-hhcCCCCCC--ChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEc-CCCcEEEEecccceecCCCCCCCccccc
Q 006004 245 AG-LATTPGIKF--TEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLIN-NAGVLKIGDFGLATTYDPSQNLPLTSRV 320 (665)
Q Consensus 245 l~-~~~~~~~~l--se~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld-~~g~lKL~DFGlA~~~~~~~~~~~~~~~ 320 (665)
+. ++...-++| .|..+.+|.+||++||.|||++.|||||||.+|+||+ -.|.+||.|||.++.+..- +-...++.
T Consensus 659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi-nP~TETFT 737 (1226)
T KOG4279|consen 659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI-NPCTETFT 737 (1226)
T ss_pred HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccC-Cccccccc
Confidence 65 444455678 8889999999999999999999999999999999997 4799999999999876432 22345778
Q ss_pred ccccccCccccc-CCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCC
Q 006004 321 VTLWYRAPELLL-GATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQ 399 (665)
Q Consensus 321 gT~~Y~APE~l~-~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~ 399 (665)
||+.|||||++. |...|+.++|||||||++.||.||+|||....... +.++++ | .|+...
T Consensus 738 GTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq--AAMFkV-G----------------myKvHP 798 (1226)
T KOG4279|consen 738 GTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ--AAMFKV-G----------------MYKVHP 798 (1226)
T ss_pred cchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh--Hhhhhh-c----------------ceecCC
Confidence 999999999996 45789999999999999999999999996543221 112221 0 111111
Q ss_pred cchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 400 PYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 400 p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
.++..++.+++.||.+|+.+||..||+|.++|+.||++..
T Consensus 799 -------~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 799 -------PIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred -------CCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 1234578899999999999999999999999999999865
No 266
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.2e-38 Score=336.10 Aligned_cols=274 Identities=22% Similarity=0.287 Sum_probs=202.4
Q ss_pred CceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEeccccchhhhc
Q 006004 170 TYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEHDLAGLAT 249 (665)
Q Consensus 170 ~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g~ll~~~~ 249 (665)
+++.||.+++..+++.||||+++......+....+.+|+.+++.++|+||+++++++.... .+|++|||+.++.+..+.
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~-~~~~~~e~~~~~~l~~~l 90 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDS-ELYVVSPLMAYGSCEDLL 90 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCC-eEEEEEeccCCCCHHHHH
Confidence 4566777777779999999999876555667788999999999999999999999988755 789999999976555444
Q ss_pred CC--CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC------CCcccccc
Q 006004 250 TP--GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN------LPLTSRVV 321 (665)
Q Consensus 250 ~~--~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~------~~~~~~~g 321 (665)
.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||.+..+..... .......+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (314)
T cd08216 91 KTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVK 170 (314)
T ss_pred HHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccc
Confidence 32 34689999999999999999999999999999999999999999999999999876532211 11233456
Q ss_pred cccccCcccccCC-cccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChh----HHhhhcccccc---
Q 006004 322 TLWYRAPELLLGA-TKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSED----YWRKSKSAHAT--- 393 (665)
Q Consensus 322 T~~Y~APE~l~~~-~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~----~~~~~~~~~~~--- 393 (665)
+..|+|||++.+. ..|+.++|+|||||++|+|++|..||........+.... .+..... .+.........
T Consensus 171 ~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (314)
T cd08216 171 NLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKV--RGTVPCLLDKSTYPLYEDSMSQSRS 248 (314)
T ss_pred cccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--hccCccccccCchhhhcCCcCcccc
Confidence 8899999998753 358899999999999999999999998766544332221 2221110 00000000000
Q ss_pred CCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 394 SFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 394 ~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
.+................++.++.+||.+||.+||++|||+.++|+||||+..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~ 301 (314)
T cd08216 249 SNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQC 301 (314)
T ss_pred cccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhh
Confidence 00000000111112223467889999999999999999999999999999854
No 267
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.5e-38 Score=329.21 Aligned_cols=247 Identities=24% Similarity=0.357 Sum_probs=195.1
Q ss_pred CeeEEEEe--eccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcEEE
Q 006004 159 AFEKIDKI--GQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 159 ~y~~~~~L--G~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l~l 235 (665)
.|++.+.+ |+|+||.||+++++.++..+|+|.+....... .|+.+...+ +||||+++++.|...+ .+|+
T Consensus 15 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~~~~~~~~-~~~i 86 (267)
T PHA03390 15 NCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLYYSVTTLK-GHVL 86 (267)
T ss_pred hhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEEEEEecCC-eeEE
Confidence 56666665 99999999999999999999999987543221 122223222 7999999999998765 7999
Q ss_pred EEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCC-cEEEEecccceecCCCCCC
Q 006004 236 VFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAG-VLKIGDFGLATTYDPSQNL 314 (665)
Q Consensus 236 V~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g-~lKL~DFGlA~~~~~~~~~ 314 (665)
||||+.++.+..+......+++.+++.++.||+.||.|||+.||+||||||+|||++.++ .++|+|||++......
T Consensus 87 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~--- 163 (267)
T PHA03390 87 IMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP--- 163 (267)
T ss_pred EEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC---
Confidence 999998755544444444899999999999999999999999999999999999999998 9999999999876432
Q ss_pred CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHH-HHHHHHhcCCCChhHHhhhcccccc
Q 006004 315 PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQ-MHKIFKLCGSPSEDYWRKSKSAHAT 393 (665)
Q Consensus 315 ~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~-l~kI~~~~g~p~~~~~~~~~~~~~~ 393 (665)
....++..|+|||++.+ ..++.++|+|||||++|+|++|..||......+. ...+.... ..
T Consensus 164 --~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~-------------- 225 (267)
T PHA03390 164 --SCYDGTLDYFSPEKIKG-HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QK-------------- 225 (267)
T ss_pred --ccCCCCCcccChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cc--------------
Confidence 23467999999999976 5689999999999999999999999986544321 11111100 00
Q ss_pred CCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC-HHHHHhCcCCCC
Q 006004 394 SFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS-AASALRSEFFKT 445 (665)
Q Consensus 394 ~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT-a~eaL~Hp~f~~ 445 (665)
.....+.+++.+.+||.+||+.||.+|++ ++++|+||||+.
T Consensus 226 -----------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 226 -----------KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred -----------cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 00112368899999999999999999996 599999999973
No 268
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=5e-38 Score=316.76 Aligned_cols=252 Identities=33% Similarity=0.533 Sum_probs=208.9
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+|+..+.||+|++|.||++.+..+++.|++|++..... .....+.+|+.+++.++|+||+++++++.... ..++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKKD-ELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEe
Confidence 48899999999999999999998999999999975442 35567889999999999999999999988754 7899999
Q ss_pred eccccchhhhc-CCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 239 YMEHDLAGLAT-TPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 239 y~~g~ll~~~~-~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
|+.+..+..+. .....+++..+..++.||+.||.+||.+|++|+||+|+||+++.++.++|+|||++........ ..
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~ 155 (253)
T cd05122 78 FCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--RN 155 (253)
T ss_pred cCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc--cc
Confidence 99965555444 3335799999999999999999999999999999999999999999999999999987754332 23
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKP 397 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~ 397 (665)
...++..|+|||.+.+ ..++.++|+|||||++|+|++|..||...+....+..+.... .+ .
T Consensus 156 ~~~~~~~~~~PE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~-~---------------- 216 (253)
T cd05122 156 TMVGTPYWMAPEVING-KPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNG-PP-G---------------- 216 (253)
T ss_pred ceecCCcccCHHHHcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcC-CC-C----------------
Confidence 4578899999999876 458899999999999999999999998876555444432210 00 0
Q ss_pred CCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcC
Q 006004 398 QQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEF 442 (665)
Q Consensus 398 ~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~ 442 (665)
.+ ....++..+.+||.+||..||.+|||+.++|.|||
T Consensus 217 -~~-------~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 217 -LR-------NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred -cC-------cccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 00 00124788999999999999999999999999998
No 269
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.1e-38 Score=334.57 Aligned_cols=257 Identities=29% Similarity=0.507 Sum_probs=211.3
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++++.||+|+||.||++.+..++..||+|.+..... ...+.+.+|+.+++.++||||+++++++.... ..|+||
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~-~~~lv~ 95 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVGD-ELWVVM 95 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc--hHHHHHHHHHHHHhhcCCCCeeehhheeeeCC-cEEEEE
Confidence 479999999999999999999999999999999864432 23456789999999999999999999988754 789999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
||+.++.+..+.... .+++.++..++.||+.||.|||++|++|+||||+||+++.++.+||+|||++........ ...
T Consensus 96 e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~-~~~ 173 (293)
T cd06647 96 EYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRS 173 (293)
T ss_pred ecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc-ccc
Confidence 999976665554433 588999999999999999999999999999999999999999999999999876644322 223
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKP 397 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~ 397 (665)
...+++.|+|||.+.+ ..++.++|+|||||++|+|++|++||...+..+.+..+... +.+
T Consensus 174 ~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~-~~~------------------ 233 (293)
T cd06647 174 TMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTP------------------ 233 (293)
T ss_pred cccCChhhcCchhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcC-CCC------------------
Confidence 4468899999999876 56789999999999999999999999887665443332110 000
Q ss_pred CCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 398 QQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 398 ~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
. ......++..+.+||.+||..||++||++.+++.|+||+..
T Consensus 234 ~-------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~ 275 (293)
T cd06647 234 E-------LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIA 275 (293)
T ss_pred C-------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcC
Confidence 0 01122467889999999999999999999999999999864
No 270
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=3.4e-38 Score=324.07 Aligned_cols=254 Identities=30% Similarity=0.467 Sum_probs=203.9
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCC-CCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFAN-MDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
++|++.+.||+|+||.||+|++..+++.||||.++... ........+.+|+.+++.++||||+++++++.... .+|+|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDN-ELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECC-eEEEE
Confidence 47999999999999999999999999999999886533 34455667889999999999999999999988754 78999
Q ss_pred EEeccccchhhhc----CCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC
Q 006004 237 FEYMEHDLAGLAT----TPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 237 ~Ey~~g~ll~~~~----~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~ 312 (665)
|||+.++.+..+. .....+++.++..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++..+....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~ 160 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh
Confidence 9999975444322 233458999999999999999999999999999999999999999999999999998764322
Q ss_pred CCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 313 NLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTE-VEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 313 ~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~-~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
. ......+++.|+|||.+.+ ..++.++|+|||||++|+|++|+.||..... ...+.......+.++.
T Consensus 161 ~-~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------- 228 (267)
T cd08228 161 T-AAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPL---------- 228 (267)
T ss_pred H-HHhcCCCCccccChhhhcc-CCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCC----------
Confidence 1 1233468899999999876 5678999999999999999999999865432 1222222221111100
Q ss_pred ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 392 ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 392 ~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
....++..+.+||.+||..||++||++.++|+.
T Consensus 229 ----------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 229 ----------------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred ----------------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 012467889999999999999999999999973
No 271
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2.9e-38 Score=324.83 Aligned_cols=252 Identities=19% Similarity=0.269 Sum_probs=201.2
Q ss_pred eeEEEEeeccCceEEEEEEECCC---CcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC-----C
Q 006004 160 FEKIDKIGQGTYSSVYKARDLET---GKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS-----G 231 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~---g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~-----~ 231 (665)
|++.+.||+|+||.||+|....+ +..||||+++...........+.+|+.+++.++||||+++++++.... .
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 56789999999999999997654 478999999866555556677899999999999999999999876533 1
Q ss_pred cEEEEEEeccccchhhhc-C-----CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccc
Q 006004 232 SLYLVFEYMEHDLAGLAT-T-----PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLA 305 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~-~-----~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA 305 (665)
..++||||+.++.+..+. . ....+++..+..++.||+.||.|||++||+||||||+|||+++++.+||+|||++
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence 379999999875443332 1 2236899999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCC-CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhH
Q 006004 306 TTYDPSQNL-PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDY 383 (665)
Q Consensus 306 ~~~~~~~~~-~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~ 383 (665)
+........ ......++..|+|||++.+ ..++.++|||||||++|||++ |.+||.+.+..+.+..+.... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~--~---- 233 (273)
T cd05035 161 KKIYSGDYYRQGRIAKMPVKWIAIESLAD-RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGN--R---- 233 (273)
T ss_pred eeccccccccccccccCCccccCHhhccc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC--C----
Confidence 876433211 1112234678999998865 678999999999999999999 899998877666555443210 0
Q ss_pred HhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 384 WRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 384 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
......++..+.+||.+||+.||.+|||+.+++.+
T Consensus 234 ----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 234 ----------------------LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred ----------------------CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 01123578899999999999999999999999874
No 272
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.4e-38 Score=330.15 Aligned_cols=262 Identities=24% Similarity=0.420 Sum_probs=207.9
Q ss_pred CeeEEEEeeccCceEEEEEEEC---CCCcEEEEEEEecCCC--CHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCc
Q 006004 159 AFEKIDKIGQGTYSSVYKARDL---ETGKIVALKKVRFANM--DPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGS 232 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~---~~g~~vAiK~i~~~~~--~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~ 232 (665)
.|++.+.||.|+||.||+|++. .+|+.||+|+++.... .....+.+.+|+.+++++ +|+||+++++++.... .
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-~ 79 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDT-K 79 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCC-e
Confidence 4889999999999999999975 4789999999875432 122345678899999999 6999999999988754 7
Q ss_pred EEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC
Q 006004 233 LYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~ 312 (665)
+|+||||+.+..+.........+++..+..++.||+.||.|||+.||+||||+|+|||++.++.+||+|||++..+....
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 159 (290)
T cd05613 80 LHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDE 159 (290)
T ss_pred EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceeccccc
Confidence 89999999976555544445579999999999999999999999999999999999999999999999999998765433
Q ss_pred CCCcccccccccccCcccccCC-cccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 313 NLPLTSRVVTLWYRAPELLLGA-TKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 313 ~~~~~~~~gT~~Y~APE~l~~~-~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
........|+..|+|||.+.+. ..++.++|||||||++|+|++|..||...........+....-..
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~------------ 227 (290)
T cd05613 160 VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKS------------ 227 (290)
T ss_pred ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhcc------------
Confidence 3333455789999999998753 356889999999999999999999997543322222222211000
Q ss_pred ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCc-----CHHHHHhCcCCCCC
Q 006004 392 ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRG-----SAASALRSEFFKTE 446 (665)
Q Consensus 392 ~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~Rp-----Ta~eaL~Hp~f~~~ 446 (665)
.. .....+++.+.+||.+||..||.+|+ ++.+++.||||...
T Consensus 228 ------~~-------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 274 (290)
T cd05613 228 ------EP-------PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKI 274 (290)
T ss_pred ------CC-------CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccC
Confidence 00 01134788899999999999999997 89999999999864
No 273
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.6e-38 Score=328.70 Aligned_cols=251 Identities=24% Similarity=0.350 Sum_probs=203.4
Q ss_pred CCeeEEEEeeccCceEEEEEEECC-----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCc
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLE-----TGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGS 232 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~-----~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~ 232 (665)
++|.+.+.||+|+||.||+|.+.. +++.||+|+++... ..+....+.+|+++|+.++|+||+++++++.... .
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~ 82 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA-SNDARKDFEREAELLTNFQHENIVKFYGVCTEGD-P 82 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC-CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC-C
Confidence 469999999999999999998753 46789999987543 3334567889999999999999999999988764 7
Q ss_pred EEEEEEeccccchhhhcCC--------------CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEE
Q 006004 233 LYLVFEYMEHDLAGLATTP--------------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLK 298 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~~--------------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lK 298 (665)
+|+||||+.++.+..+... ...+++.++..++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~k 162 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVK 162 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEE
Confidence 9999999987655443321 23588999999999999999999999999999999999999999999
Q ss_pred EEecccceecCCCCC-CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhc
Q 006004 299 IGDFGLATTYDPSQN-LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLC 376 (665)
Q Consensus 299 L~DFGlA~~~~~~~~-~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~ 376 (665)
|+|||++........ .......+++.|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+.+..+....
T Consensus 163 l~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~ 241 (280)
T cd05049 163 IGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGR 241 (280)
T ss_pred ECCcccceecccCcceecCCCCcccceecChhhhcc-CCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC
Confidence 999999986532221 11223345788999999876 568999999999999999998 999998877766555543210
Q ss_pred CCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 377 GSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 377 g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
. ......++..+.+||.+||..||.+|||+.|+++
T Consensus 242 --~--------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 242 --L--------------------------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred --c--------------------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 0 0111357889999999999999999999999986
No 274
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-39 Score=367.15 Aligned_cols=251 Identities=26% Similarity=0.422 Sum_probs=202.9
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCC-CCCcceeee-eeecc---C--C
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLD-HPNVMKLEG-LVTSR---S--G 231 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~-~~~~~---~--~ 231 (665)
++++.+.|.+|||+.||+|++...|..||+|++-.. ++...+.+.+||++|+.|+ |+|||.+++ ..... . .
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 689999999999999999999988899999998644 6778889999999999997 999999999 33222 1 2
Q ss_pred cEEEEEEecc-ccchhhhcCC-CCCCChhHHHHHHHHHHHHHHHHHhCC--ccccCCCcccEEEcCCCcEEEEeccccee
Q 006004 232 SLYLVFEYME-HDLAGLATTP-GIKFTEPQIKCYMQQLLRGLEHCHSRG--ILHRDIKGSNLLINNAGVLKIGDFGLATT 307 (665)
Q Consensus 232 ~l~lV~Ey~~-g~ll~~~~~~-~~~lse~~i~~i~~QIl~aL~~LH~~g--IiHrDLKPeNILld~~g~lKL~DFGlA~~ 307 (665)
.++|+||||. |+|.+.+.++ ...|+|.+|.+||+++++|+.+||... |||||||-|||||+.+|..||||||.|..
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt 195 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATT 195 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence 4789999999 5777766642 234999999999999999999999998 99999999999999999999999999975
Q ss_pred cCCCCCCCc--------ccccccccccCccccc--CCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcC
Q 006004 308 YDPSQNLPL--------TSRVVTLWYRAPELLL--GATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCG 377 (665)
Q Consensus 308 ~~~~~~~~~--------~~~~gT~~Y~APE~l~--~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g 377 (665)
.-....... -...-|+.|+|||+|. ....++.++|||+|||+||-|+....||.+.....++..-+.
T Consensus 196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y~--- 272 (738)
T KOG1989|consen 196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNYS--- 272 (738)
T ss_pred ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEecccc---
Confidence 422211000 0123499999999985 336789999999999999999999999987644332222111
Q ss_pred CCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcC
Q 006004 378 SPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEF 442 (665)
Q Consensus 378 ~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~ 442 (665)
| ..++.++..+++||..||+.||.+||++.|++.+-+
T Consensus 273 -----------------~-----------P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~ 309 (738)
T KOG1989|consen 273 -----------------F-----------PPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIF 309 (738)
T ss_pred -----------------C-----------CCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence 1 112467889999999999999999999999998655
No 275
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.5e-38 Score=346.40 Aligned_cols=253 Identities=21% Similarity=0.347 Sum_probs=198.2
Q ss_pred CCeeEEEEeeccCceEEEEEEE-----CCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCC
Q 006004 158 DAFEKIDKIGQGTYSSVYKARD-----LETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSG 231 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~-----~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~ 231 (665)
++|++.+.||+|+||.||+|++ ..++..||||+++.... ....+.+.+|+.+|+.+ +||||+++++++....
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~- 112 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHINIVNLLGACTVGG- 112 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC-cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC-
Confidence 4699999999999999999974 34677899999875432 23456688999999999 8999999999988765
Q ss_pred cEEEEEEecccc-chhhhcCC-----------------------------------------------------------
Q 006004 232 SLYLVFEYMEHD-LAGLATTP----------------------------------------------------------- 251 (665)
Q Consensus 232 ~l~lV~Ey~~g~-ll~~~~~~----------------------------------------------------------- 251 (665)
..|+|||||.++ |...+...
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 789999999864 43333221
Q ss_pred ---------------CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC-
Q 006004 252 ---------------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP- 315 (665)
Q Consensus 252 ---------------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~- 315 (665)
...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+.......
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 272 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVV 272 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccc
Confidence 1247888999999999999999999999999999999999999999999999998764332211
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATS 394 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~ 394 (665)
.....++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+......+.++....
T Consensus 273 ~~~~~~~~~y~aPE~~~~-~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~------------------ 333 (375)
T cd05104 273 KGNARLPVKWMAPESIFN-CVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEG------------------ 333 (375)
T ss_pred cCCCCCCcceeChhHhcC-CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhC------------------
Confidence 122334677999999976 578999999999999999998 889998765444333332210
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
..+ ......+.++.+||.+||..||.+|||+.++++.
T Consensus 334 ~~~---------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 334 YRM---------LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred ccC---------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 000 0112357789999999999999999999999864
No 276
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=3.5e-38 Score=321.54 Aligned_cols=245 Identities=24% Similarity=0.393 Sum_probs=195.8
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEecccc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEHD 243 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g~ 243 (665)
+.||+|+||.||+|++..+++.||+|.+... ...+....+.+|+++++.++||||+++++++.... .+|+||||+.++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ-PIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC-CeEEEEeeccCC
Confidence 3699999999999999999999999987643 24455667889999999999999999999987755 789999999875
Q ss_pred chh-hhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC-cccccc
Q 006004 244 LAG-LATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP-LTSRVV 321 (665)
Q Consensus 244 ll~-~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~-~~~~~g 321 (665)
.+. .+...+..+++.++..++.||+.||.|||++||+|+||||+|||++.++.+||+|||++.......... ......
T Consensus 79 ~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 158 (252)
T cd05084 79 DFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQI 158 (252)
T ss_pred cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCC
Confidence 554 444445568999999999999999999999999999999999999999999999999987654221110 011122
Q ss_pred cccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCc
Q 006004 322 TLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQP 400 (665)
Q Consensus 322 T~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p 400 (665)
+..|+|||.+.+ ..++.++|||||||++|+|++ |.+||...+..+....+..... .
T Consensus 159 ~~~y~aPE~~~~-~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~-------------------~--- 215 (252)
T cd05084 159 PVKWTAPEALNY-GRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVR-------------------L--- 215 (252)
T ss_pred ceeecCchhhcC-CCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC-------------------C---
Confidence 456999999876 568999999999999999997 8899977665544443322100 0
Q ss_pred chhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 401 YKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 401 ~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.....++..+.+||.+||..||++|||+.++++
T Consensus 216 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 216 ------PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred ------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 011246788999999999999999999999985
No 277
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.6e-38 Score=327.69 Aligned_cols=252 Identities=21% Similarity=0.369 Sum_probs=202.6
Q ss_pred CCeeEEEEeeccCceEEEEEEE----CCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARD----LETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSL 233 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~----~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l 233 (665)
++|++.+.||+|+||.||+|.+ ..++..||+|.+.... .......+.+|+.+++.++||||+++++++.... ..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~ 82 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ-PV 82 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC-ce
Confidence 5799999999999999999985 3456789999987433 3445567889999999999999999999988765 78
Q ss_pred EEEEEeccccch-hhhcCC----------------CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCc
Q 006004 234 YLVFEYMEHDLA-GLATTP----------------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGV 296 (665)
Q Consensus 234 ~lV~Ey~~g~ll-~~~~~~----------------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~ 296 (665)
|+||||+.++.+ ..+... ...+++.++..++.||+.||.|||++||+||||||+|||++.++.
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~ 162 (283)
T cd05090 83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLH 162 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCc
Confidence 999999986544 333211 124788999999999999999999999999999999999999999
Q ss_pred EEEEecccceecCCCCC-CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 006004 297 LKIGDFGLATTYDPSQN-LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFK 374 (665)
Q Consensus 297 lKL~DFGlA~~~~~~~~-~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~ 374 (665)
+||+|||++........ .......++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+.+..+..
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~ 241 (283)
T cd05090 163 VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMY-GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRK 241 (283)
T ss_pred EEeccccccccccCCcceecccCCCccceecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 99999999987543221 11233455778999999876 568999999999999999998 9999988776555555432
Q ss_pred hcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 375 LCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 375 ~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
.. . ......+++.+.+||.+||+.||.+||++.+++++
T Consensus 242 ~~-~---------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 242 RQ-L---------------------------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred CC-c---------------------------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 10 0 01123578899999999999999999999999875
No 278
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=5.2e-38 Score=327.92 Aligned_cols=259 Identities=19% Similarity=0.290 Sum_probs=203.1
Q ss_pred CCCeeEEEEeeccCceEEEEEEECC-----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCC
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLE-----TGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSG 231 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~-----~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ 231 (665)
.++|++.+.||+|+||.||+|.++. .+..||+|.+..... ......+.+|+.+++.++||||+++++++....
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 82 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ- 82 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-
Confidence 3579999999999999999997652 355899998864432 233445778999999999999999999987655
Q ss_pred cEEEEEEeccccchhhhcCC----------CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEe
Q 006004 232 SLYLVFEYMEHDLAGLATTP----------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGD 301 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~~~----------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~D 301 (665)
..|+||||+.++.+..+... ...++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~D 162 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGD 162 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECc
Confidence 78999999986544433321 12346678899999999999999999999999999999999999999999
Q ss_pred cccceecCCCCCC-CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCC
Q 006004 302 FGLATTYDPSQNL-PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSP 379 (665)
Q Consensus 302 FGlA~~~~~~~~~-~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p 379 (665)
||+++........ ......++..|+|||.+.+ ..++.++|+|||||++|+|++ |.+||.+.+..+.+..+... +.+
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-~~~ 240 (288)
T cd05061 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG-GYL 240 (288)
T ss_pred CCccccccccccccccCCCcccccccCHHHhcc-CCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCC
Confidence 9999865332211 1122345678999999876 568999999999999999998 78999887766555444321 000
Q ss_pred ChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh------CcCCCCC
Q 006004 380 SEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR------SEFFKTE 446 (665)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~------Hp~f~~~ 446 (665)
......++.+.+||.+||+.||.+|||+.++++ ||||...
T Consensus 241 ---------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 241 ---------------------------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred ---------------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 011245788999999999999999999999987 9999864
No 279
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=3.5e-38 Score=334.11 Aligned_cols=252 Identities=23% Similarity=0.348 Sum_probs=201.1
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcE----EEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCc
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKI----VALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGS 232 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~----vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~ 232 (665)
..+|++++.||+|+||.||+|++..++.. ||+|+++... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~--~ 82 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS--T 82 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC--C
Confidence 35799999999999999999998777664 8999986432 344556788999999999999999999988753 4
Q ss_pred EEEEEEecccc-chhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 233 LYLVFEYMEHD-LAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 233 l~lV~Ey~~g~-ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
.++|+||+.++ +...+......+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++..+...
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 162 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAD 162 (316)
T ss_pred ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCC
Confidence 78999999864 55555554556899999999999999999999999999999999999999999999999999876543
Q ss_pred CCC-CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcc
Q 006004 312 QNL-PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKS 389 (665)
Q Consensus 312 ~~~-~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~ 389 (665)
... ......++..|+|||++.+ ..++.++|||||||++|||++ |..||.+....+.. .+......+
T Consensus 163 ~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~-~~~~~~~~~---------- 230 (316)
T cd05108 163 EKEYHAEGGKVPIKWMALESILH-RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERL---------- 230 (316)
T ss_pred CcceeccCCccceeecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHhCCCCC----------
Confidence 221 1122234678999999876 678999999999999999997 99999876654433 222210000
Q ss_pred ccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 390 AHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 390 ~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
......+.++.+||.+||..||.+|||+.+++.+
T Consensus 231 -----------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 231 -----------------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred -----------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 0012356788999999999999999999999986
No 280
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=3.5e-38 Score=331.15 Aligned_cols=257 Identities=28% Similarity=0.470 Sum_probs=211.6
Q ss_pred eeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEe
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEY 239 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey 239 (665)
|....+||+|+||.||++.+..+++.||||++.... ......+.+|+.+++.++|+||+++++++...+ ..|+||||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e~ 98 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD-ELWVVMEF 98 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCC-EEEEEEec
Confidence 445578999999999999999999999999986432 234556889999999999999999999988755 78999999
Q ss_pred ccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccc
Q 006004 240 MEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSR 319 (665)
Q Consensus 240 ~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~ 319 (665)
+.++.+..+.... .+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++........ .....
T Consensus 99 ~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~-~~~~~ 176 (292)
T cd06657 99 LEGGALTDIVTHT-RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKSL 176 (292)
T ss_pred CCCCcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccc-ccccc
Confidence 9987666655443 689999999999999999999999999999999999999999999999999876643221 22345
Q ss_pred cccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCC
Q 006004 320 VVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQ 399 (665)
Q Consensus 320 ~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~ 399 (665)
.+++.|+|||.+.+ ..++.++|+||+||++|+|++|.+||.+.+..+.+..+.... + .
T Consensus 177 ~~~~~y~~pE~~~~-~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~--~-~------------------ 234 (292)
T cd06657 177 VGTPYWMAPELISR-LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL--P-P------------------ 234 (292)
T ss_pred ccCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhC--C-c------------------
Confidence 68999999998875 567899999999999999999999999877666555443211 0 0
Q ss_pred cchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCC
Q 006004 400 PYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPL 448 (665)
Q Consensus 400 p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~ 448 (665)
.......++..+.+||.+||..||.+||++.++|.||||.....
T Consensus 235 -----~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 235 -----KLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278 (292)
T ss_pred -----ccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence 00011346888999999999999999999999999999987653
No 281
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=8.8e-38 Score=320.63 Aligned_cols=248 Identities=23% Similarity=0.378 Sum_probs=200.0
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++.+.||+|+||.||+|.+. +++.||+|.++..... .+.+.+|+.++++++||||+++++++.... .+|+||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~ 80 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMD---PKDFLAEAQIMKKLRHPKLIQLYAVCTLEE-PIYIVT 80 (261)
T ss_pred hheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCccc---HHHHHHHHHHHHHCCCCCccceeEEEecCC-Ceeeee
Confidence 46999999999999999999975 4578999998754432 345788999999999999999999887654 789999
Q ss_pred Eecccc-chhhhcCC-CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 238 EYMEHD-LAGLATTP-GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 238 Ey~~g~-ll~~~~~~-~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||+.+. +...+... +..+++.++..++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++..+.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (261)
T cd05068 81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEA 160 (261)
T ss_pred ecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccc
Confidence 999654 44444332 3468999999999999999999999999999999999999999999999999998775322111
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATS 394 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~ 394 (665)
......+..|+|||++.+ ..++.++|+|||||++|+|++ |+.||.+.+....+..+......
T Consensus 161 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~---------------- 223 (261)
T cd05068 161 REGAKFPIKWTAPEAALY-NRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRM---------------- 223 (261)
T ss_pred cCCCcCceeccCcccccc-CCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC----------------
Confidence 111223457999998876 568999999999999999999 99999988776666555321000
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
......+..+.+||.+||..||.+||++.++++
T Consensus 224 ------------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 224 ------------PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred ------------CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 011246788999999999999999999999875
No 282
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=5.3e-38 Score=322.07 Aligned_cols=247 Identities=24% Similarity=0.400 Sum_probs=199.7
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|+++++||+|+||.||+|.+. ++..||+|.++...... ..+.+|+.++++++|+||+++++++.. ...|++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~---~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~lv~ 79 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSP---ESFLEEAQIMKKLRHDKLVQLYAVVSE--EPIYIVT 79 (260)
T ss_pred HHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCH---HHHHHHHHHHHhcCCCceEEEEeEECC--CCcEEEE
Confidence 47999999999999999999875 56679999987654432 347899999999999999999998753 3579999
Q ss_pred Eeccccch-hhhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 238 EYMEHDLA-GLATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 238 Ey~~g~ll-~~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||+.++.+ ..+.. ....+++.++..++.||+.||.|||++||+|+||||+|||+++++.++|+|||++..+.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05070 80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCccccc
Confidence 99987544 44433 23468999999999999999999999999999999999999999999999999998764432222
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATS 394 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~ 394 (665)
.....++..|+|||++.+ ..++.++|+|||||++|+|++ |.+||.+.+..+.+..+.....
T Consensus 160 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~----------------- 221 (260)
T cd05070 160 RQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYR----------------- 221 (260)
T ss_pred ccCCCCCccccChHHHhc-CCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-----------------
Confidence 222345678999998875 568999999999999999999 8999998877666665532100
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
. ......+..+.+||.+||.+||.+|||+.+++.
T Consensus 222 --~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 222 --M---------PCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred --C---------CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 0 012357788999999999999999999998874
No 283
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=8.4e-38 Score=321.68 Aligned_cols=252 Identities=22% Similarity=0.337 Sum_probs=203.4
Q ss_pred CCeeEEEEeeccCceEEEEEEECCC---CcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLET---GKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~---g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~ 234 (665)
++|++.+.||+|+||.||+|++..+ ...||||.++... .......+.+|+.+++.++||||+++++++.... .+|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~ 81 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSR-PVM 81 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCC-ceE
Confidence 4799999999999999999998654 4579999887543 3444566889999999999999999999887654 789
Q ss_pred EEEEeccccchh-hhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC
Q 006004 235 LVFEYMEHDLAG-LATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 235 lV~Ey~~g~ll~-~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~ 313 (665)
+||||+.++.+. .+......+++.++..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++..+.....
T Consensus 82 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd05033 82 IITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEA 161 (266)
T ss_pred EEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccccc
Confidence 999999875554 4444445799999999999999999999999999999999999999999999999999998752211
Q ss_pred C-CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 314 L-PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 314 ~-~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
. ......+++.|+|||.+.+ ..++.++|||||||++|+|++ |..||...+..+....+......
T Consensus 162 ~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~------------- 227 (266)
T cd05033 162 TYTTKGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRL------------- 227 (266)
T ss_pred ceeccCCCCCccccChhhhcc-CCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC-------------
Confidence 1 1112234678999998876 568999999999999999998 99999877766555554321000
Q ss_pred ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 392 ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 392 ~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
......+..+.+||.+||..||++||++.+++++
T Consensus 228 ---------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 228 ---------------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred ---------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0012567889999999999999999999999874
No 284
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=5.1e-38 Score=325.53 Aligned_cols=253 Identities=19% Similarity=0.281 Sum_probs=199.4
Q ss_pred CCCeeEEEEeeccCceEEEEEEEC-----CCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCC
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDL-----ETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSG 231 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~-----~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ 231 (665)
.++|++.+.||+|+||.||+|++. .++..||+|++.... .......+.+|+.+++.++||||+++++++....
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~- 82 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ- 82 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-
Confidence 357999999999999999999864 245689999986433 2233456789999999999999999999987654
Q ss_pred cEEEEEEeccccchhhhcCC-C---------CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEe
Q 006004 232 SLYLVFEYMEHDLAGLATTP-G---------IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGD 301 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~~~-~---------~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~D 301 (665)
..++||||+.++.+..+... . ..+++..+..++.||+.||.|||+.|++|+||||+|||++.++.+||+|
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~d 162 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGD 162 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECC
Confidence 78999999997555443322 1 2357788999999999999999999999999999999999999999999
Q ss_pred cccceecCCCCCC-CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCC
Q 006004 302 FGLATTYDPSQNL-PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSP 379 (665)
Q Consensus 302 FGlA~~~~~~~~~-~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p 379 (665)
||++..+...... ......+++.|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+.+..+... +.+
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-~~~ 240 (277)
T cd05062 163 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEG-GLL 240 (277)
T ss_pred CCCccccCCcceeecCCCCccCHhhcChhHhhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-CcC
Confidence 9998765332211 1122345788999999876 568999999999999999999 78999887766555443321 000
Q ss_pred ChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 380 SEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
......++.+.+||.+||..||.+|||+.+++++
T Consensus 241 ---------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 241 ---------------------------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred ---------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0112467889999999999999999999999874
No 285
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.5e-39 Score=374.87 Aligned_cols=261 Identities=32% Similarity=0.480 Sum_probs=207.4
Q ss_pred CCCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeee--------
Q 006004 155 RRADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLV-------- 226 (665)
Q Consensus 155 ~~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~-------- 226 (665)
+...+|+.++.||+|+||.||+|+++-+|+.||||+|.... .......+.+|+.+|.+|+|||||+++..|
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 35567999999999999999999999999999999998765 556677899999999999999999976544
Q ss_pred -------------------------------------------------e--c-------------------c-------
Q 006004 227 -------------------------------------------------T--S-------------------R------- 229 (665)
Q Consensus 227 -------------------------------------------------~--~-------------------~------- 229 (665)
. + .
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence 0 0 0
Q ss_pred -------------------------C--------CcEEEEEEeccccchhhhcCCCCCC-ChhHHHHHHHHHHHHHHHHH
Q 006004 230 -------------------------S--------GSLYLVFEYMEHDLAGLATTPGIKF-TEPQIKCYMQQLLRGLEHCH 275 (665)
Q Consensus 230 -------------------------~--------~~l~lV~Ey~~g~ll~~~~~~~~~l-se~~i~~i~~QIl~aL~~LH 275 (665)
+ ..+||-||||+..++..+...+... ....++.+++||++||.|+|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 0 1479999999999999988887554 46789999999999999999
Q ss_pred hCCccccCCCcccEEEcCCCcEEEEecccceecC-----------------CCCCCCcccccccccccCcccccCCc--c
Q 006004 276 SRGILHRDIKGSNLLINNAGVLKIGDFGLATTYD-----------------PSQNLPLTSRVVTLWYRAPELLLGAT--K 336 (665)
Q Consensus 276 ~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~-----------------~~~~~~~~~~~gT~~Y~APE~l~~~~--~ 336 (665)
++|||||||||.||+|+.++.|||+|||+|.... .......++.+||..|+|||++.+.. .
T Consensus 715 ~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~ 794 (1351)
T KOG1035|consen 715 DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNK 794 (1351)
T ss_pred hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccc
Confidence 9999999999999999999999999999998721 01112567889999999999998755 6
Q ss_pred cCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhc-CCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHH
Q 006004 337 YGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLC-GSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQS 415 (665)
Q Consensus 337 ~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~-g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~ 415 (665)
|+.++|||||||||+||+. ||.. ..|....+..+- |..+.+ ...+.+--+.
T Consensus 795 Yn~KiDmYSLGIVlFEM~y---PF~T--sMERa~iL~~LR~g~iP~~-----------------------~~f~~~~~~~ 846 (1351)
T KOG1035|consen 795 YNSKIDMYSLGIVLFEMLY---PFGT--SMERASILTNLRKGSIPEP-----------------------ADFFDPEHPE 846 (1351)
T ss_pred ccchhhhHHHHHHHHHHhc---cCCc--hHHHHHHHHhcccCCCCCC-----------------------cccccccchH
Confidence 9999999999999999994 3643 333333332221 111110 0001122334
Q ss_pred HHHHHHHhcccCcCCCcCHHHHHhCcCCC
Q 006004 416 ALALVDKLLTIEPENRGSAASALRSEFFK 444 (665)
Q Consensus 416 a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~ 444 (665)
...+|..||+.||.+||||.|+|++.||.
T Consensus 847 e~slI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 847 EASLIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred HHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence 56799999999999999999999999986
No 286
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=6.5e-38 Score=322.87 Aligned_cols=251 Identities=20% Similarity=0.293 Sum_probs=198.7
Q ss_pred eEEEEeeccCceEEEEEEECCCCc--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-----CCcE
Q 006004 161 EKIDKIGQGTYSSVYKARDLETGK--IVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-----SGSL 233 (665)
Q Consensus 161 ~~~~~LG~G~fg~Vy~a~~~~~g~--~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-----~~~l 233 (665)
.+.+.||+|+||.||+|++..++. .||+|.++...........+.+|+.+++.++||||+++++++... ....
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456889999999999999887775 689999876554556677888999999999999999999876422 1246
Q ss_pred EEEEEeccccchh-hhc-----CCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEeccccee
Q 006004 234 YLVFEYMEHDLAG-LAT-----TPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATT 307 (665)
Q Consensus 234 ~lV~Ey~~g~ll~-~~~-----~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~ 307 (665)
++||||+.++.+. .+. .....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 161 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKK 161 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccc
Confidence 8999999865443 322 1223589999999999999999999999999999999999999999999999999987
Q ss_pred cCCCCCC-CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHh
Q 006004 308 YDPSQNL-PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWR 385 (665)
Q Consensus 308 ~~~~~~~-~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~ 385 (665)
+...... ......+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+... ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~--~~------ 232 (272)
T cd05075 162 IYNGDYYRQGRIAKMPVKWIAIESLAD-RVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQG--NR------ 232 (272)
T ss_pred cCcccceecCCcccCCcccCCHHHccC-CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC--CC------
Confidence 6432211 1122245778999998876 578999999999999999999 89999887765554444221 00
Q ss_pred hhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 386 KSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 386 ~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
......++..+.+||.+||..||++|||+.+++++
T Consensus 233 --------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 233 --------------------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred --------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 00113577889999999999999999999999864
No 287
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=5e-38 Score=322.06 Aligned_cols=244 Identities=25% Similarity=0.326 Sum_probs=198.8
Q ss_pred EeeccCceEEEEEEE--CCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEeccc
Q 006004 165 KIGQGTYSSVYKARD--LETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEH 242 (665)
Q Consensus 165 ~LG~G~fg~Vy~a~~--~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g 242 (665)
.||+|+||.||+|.+ ..++..||+|+++.........+.+.+|+.+++.++||||+++++++... ..++||||+.+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAE--SWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC--CcEEEEecCCC
Confidence 589999999999964 46788999999876655556677789999999999999999999987543 57999999997
Q ss_pred cchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC--ccccc
Q 006004 243 DLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP--LTSRV 320 (665)
Q Consensus 243 ~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~--~~~~~ 320 (665)
+.+..+......+++..+..++.||+.||.|||++||+||||||.|||++.++.+||+|||++..+....... .....
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 159 (257)
T cd05116 80 GPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGK 159 (257)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCC
Confidence 6555544444579999999999999999999999999999999999999999999999999998764332211 11223
Q ss_pred ccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCC
Q 006004 321 VTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQ 399 (665)
Q Consensus 321 gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~ 399 (665)
+++.|+|||.+.. ..++.++|+|||||++|||++ |.+||.+.+..+....+..... +
T Consensus 160 ~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~-------------------~-- 217 (257)
T cd05116 160 WPVKWYAPECMNY-YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER-------------------M-- 217 (257)
T ss_pred CCccccCHhHhcc-CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC-------------------C--
Confidence 4678999998865 568899999999999999998 9999998877666665532110 0
Q ss_pred cchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 400 PYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 400 p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.....+++++.+||.+||+.||.+||++.++..
T Consensus 218 -------~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 218 -------ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred -------CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 011357889999999999999999999998865
No 288
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=7.5e-38 Score=322.28 Aligned_cols=247 Identities=25% Similarity=0.379 Sum_probs=199.2
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
.+|++.++||+|+||.||+|++..++ .||+|+++..... ...+.+|++++++++||||+++++++.. ...|+||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~--~~~~lv~ 79 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVT 79 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCccC---HHHHHHHHHHHHhCCCCCcceEEEEECC--CCcEEEE
Confidence 36999999999999999999986654 5999998754432 2457889999999999999999998753 3579999
Q ss_pred Eecccc-chhhhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 238 EYMEHD-LAGLATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 238 Ey~~g~-ll~~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||+.++ +...+.. ....+++..+..++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++..+.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~ 159 (262)
T cd05071 80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 159 (262)
T ss_pred EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccccc
Confidence 999874 4444433 23458999999999999999999999999999999999999999999999999998765433222
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATS 394 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~ 394 (665)
.....++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+.+..+......
T Consensus 160 ~~~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~---------------- 222 (262)
T cd05071 160 RQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM---------------- 222 (262)
T ss_pred ccCCcccceecCHhHhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCC----------------
Confidence 223345778999998875 568999999999999999999 88999888766665554321000
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.....++..+.+||.+||..||++|||+.++++
T Consensus 223 ------------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 223 ------------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred ------------CCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 011257888999999999999999999999875
No 289
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=4.9e-38 Score=321.93 Aligned_cols=248 Identities=22% Similarity=0.328 Sum_probs=199.6
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+|++.+.||+|+||.||++++. ++..+|+|++...... ...+.+|+.+++.++||||+++++++.... ..|+|||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~lv~e 79 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS---EDDFIEEAKVMMKLSHPNLVQLYGVCTKQR-PIFIVTE 79 (256)
T ss_pred HcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEEEEEEEEcCCC-ceEEEEe
Confidence 6899999999999999999885 4668999998654332 234678999999999999999999887654 7899999
Q ss_pred ecccc-chhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 239 YMEHD-LAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 239 y~~g~-ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
|++++ +...+......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++............
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (256)
T cd05059 80 YMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ 159 (256)
T ss_pred cCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccC
Confidence 99875 44444444447899999999999999999999999999999999999999999999999999865432211111
Q ss_pred cccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCC
Q 006004 318 SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFK 396 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~ 396 (665)
...++..|+|||.+.+ ..++.++|+|||||++|+|++ |.+||...+..+....+.....
T Consensus 160 ~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~------------------- 219 (256)
T cd05059 160 GTKFPVKWAPPEVFDY-SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYR------------------- 219 (256)
T ss_pred CCCCCccccCHHHhcc-CCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCc-------------------
Confidence 1223457999999876 568999999999999999998 8999988776665555432110
Q ss_pred CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 397 PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 397 ~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
. ......+..+.+||.+||..+|++|||+.++++.
T Consensus 220 ~---------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 220 L---------YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred C---------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 0 1112478899999999999999999999999874
No 290
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=7.1e-38 Score=328.17 Aligned_cols=261 Identities=26% Similarity=0.393 Sum_probs=208.5
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcEE
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l~ 234 (665)
..++|++.+.||+|+||.||+|.+..+++.||||.++..... .....+.+|+.++..+ .||||+++++++.... .+|
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-~~~ 90 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK-EENKRILMDLDVVLKSHDCPYIVKCYGYFITDS-DVF 90 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh-HHHHHHHHHHHHHHhccCCCchHhhheeeecCC-eEE
Confidence 456899999999999999999999989999999999765432 2344566788777666 5999999999998755 799
Q ss_pred EEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHh-CCccccCCCcccEEEcCCCcEEEEecccceecCCCCC
Q 006004 235 LVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHS-RGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~-~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~ 313 (665)
+||||+.+.+..++......+++..+..++.||+.||.|||+ .||+||||+|+|||++.++.+||+|||++..+.....
T Consensus 91 ~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~ 170 (296)
T cd06618 91 ICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA 170 (296)
T ss_pred EEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc
Confidence 999999887666665545579999999999999999999997 5999999999999999999999999999876643222
Q ss_pred CCcccccccccccCcccccCC---cccCcccchhhhHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCChhHHhhhcc
Q 006004 314 LPLTSRVVTLWYRAPELLLGA---TKYGAAIDMWSAGCILAELFAGKPIMPGRTE-VEQMHKIFKLCGSPSEDYWRKSKS 389 (665)
Q Consensus 314 ~~~~~~~gT~~Y~APE~l~~~---~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~-~e~l~kI~~~~g~p~~~~~~~~~~ 389 (665)
.....+++.|+|||.+.+. ..++.++|||||||++|+|++|+.||..... .+.+..+.....
T Consensus 171 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~------------ 236 (296)
T cd06618 171 --KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEP------------ 236 (296)
T ss_pred --ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCC------------
Confidence 2233578899999998753 3478899999999999999999999976432 333333322100
Q ss_pred ccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 390 AHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 390 ~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
+..+ ....++.++.+||.+||..||.+|||+.++++||||...
T Consensus 237 -------~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 279 (296)
T cd06618 237 -------PSLP-------PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRY 279 (296)
T ss_pred -------CCCC-------CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhcc
Confidence 0000 011467889999999999999999999999999999864
No 291
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=6.6e-38 Score=321.59 Aligned_cols=249 Identities=21% Similarity=0.344 Sum_probs=200.3
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++++.||+|+||.||++.+.. +..||+|.+...... ...+.+|+.++++++||||+++++++.... .+|+||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~ 78 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKLVQLYGVCTKQR-PIYIVT 78 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCccc---HHHHHHHHHHHhcCCCCCeeeEEEEEccCC-CcEEEE
Confidence 469999999999999999998754 446999998754332 345788999999999999999999987654 689999
Q ss_pred Eeccccch-hhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 238 EYMEHDLA-GLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 238 Ey~~g~ll-~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
||+.++.+ ..+......+++.+++.++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++...........
T Consensus 79 e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (256)
T cd05113 79 EYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS 158 (256)
T ss_pred EcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeec
Confidence 99987544 44444344789999999999999999999999999999999999999999999999999886543322111
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
....++..|+|||++.+ ..++.++|||||||++|+|++ |..||...+..+....+......
T Consensus 159 ~~~~~~~~y~~pe~~~~-~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~----------------- 220 (256)
T cd05113 159 VGSKFPVRWSPPEVLLY-SKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRL----------------- 220 (256)
T ss_pred CCCccChhhCCHHHHhc-CcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCC-----------------
Confidence 22235678999999876 568999999999999999998 99999887766655555331100
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
......+..+.+||.+||..||.+|||+.+++.+
T Consensus 221 -----------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 221 -----------YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred -----------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 0012357889999999999999999999999864
No 292
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=6.9e-38 Score=326.99 Aligned_cols=250 Identities=24% Similarity=0.349 Sum_probs=201.4
Q ss_pred CCeeEEEEeeccCceEEEEEEE-----CCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCc
Q 006004 158 DAFEKIDKIGQGTYSSVYKARD-----LETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGS 232 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~-----~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~ 232 (665)
++|.+.+.||+|+||.||++.+ ..++..||+|.+... .......+.+|++++++++||||+++++++.... .
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 81 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD-P 81 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC-c
Confidence 4699999999999999999985 234567999988643 2345567889999999999999999999988754 7
Q ss_pred EEEEEEeccccchhhhcC-C------------CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEE
Q 006004 233 LYLVFEYMEHDLAGLATT-P------------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKI 299 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~-~------------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL 299 (665)
+|+||||+.++.+..+.. . ...+++.++..++.||+.||+|||++||+||||||+|||+++++.+||
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEe
Confidence 899999998755443332 1 124899999999999999999999999999999999999999999999
Q ss_pred EecccceecCCCCC-CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcC
Q 006004 300 GDFGLATTYDPSQN-LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCG 377 (665)
Q Consensus 300 ~DFGlA~~~~~~~~-~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g 377 (665)
+|||++........ .......+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+.+..+....
T Consensus 162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~- 239 (288)
T cd05093 162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGR- 239 (288)
T ss_pred ccCCccccccCCceeecCCCCCccccccCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-
Confidence 99999986543221 11122345778999999876 578999999999999999998 999998887766666654311
Q ss_pred CCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 378 SPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 378 ~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
. ......++.++.+||.+||+.||.+|||+.+++.
T Consensus 240 -~--------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 240 -V--------------------------LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred -c--------------------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 0 0011357788999999999999999999999864
No 293
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-39 Score=353.63 Aligned_cols=248 Identities=25% Similarity=0.411 Sum_probs=207.0
Q ss_pred CCCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcE
Q 006004 155 RRADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSL 233 (665)
Q Consensus 155 ~~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l 233 (665)
...+.|++...||.|+|+.|..|.+..+++.+++|++.... ....+|+.++... +||||+++++++.+.. .+
T Consensus 319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~-~~ 391 (612)
T KOG0603|consen 319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA------DDNQDEIPISLLVRDHPNIVKSHDVYEDGK-EI 391 (612)
T ss_pred CcchhhccccccCCCCccceeeeeccccccchhheeccccc------cccccccchhhhhcCCCcceeecceecCCc-ee
Confidence 35678999999999999999999999999999999997552 1234678777666 8999999999998764 79
Q ss_pred EEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEE-cCCCcEEEEecccceecCCCC
Q 006004 234 YLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLI-NNAGVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 234 ~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILl-d~~g~lKL~DFGlA~~~~~~~ 312 (665)
|+|||++.|+.+...+.....+. .++..|++||+.|+.|||++|||||||||+|||+ ++.|+++|+|||.+......
T Consensus 392 ~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred eeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 99999999876655444443344 7888999999999999999999999999999999 58999999999999887544
Q ss_pred CCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChH-HHHHHHHHhcCCCChhHHhhhcccc
Q 006004 313 NLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEV-EQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 313 ~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~-e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
..+.+-|..|.|||++.. ..|+.++||||||++||+||+|+.||...... +.+.+| +.+...
T Consensus 470 ---~~tp~~t~~y~APEvl~~-~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i----~~~~~s--------- 532 (612)
T KOG0603|consen 470 ---CDTPALTLQYVAPEVLAI-QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRI----QMPKFS--------- 532 (612)
T ss_pred ---hcccchhhcccChhhhcc-CCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhh----cCCccc---------
Confidence 345577999999999984 78999999999999999999999999876555 333333 222111
Q ss_pred ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 392 ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 392 ~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
..+|..|++||..||+.||.+|+++.+++.||||...
T Consensus 533 ------------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~~ 569 (612)
T KOG0603|consen 533 ------------------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFLSH 569 (612)
T ss_pred ------------------cccCHHHHHHHHHhccCChhhCcChhhhccCcchhcC
Confidence 3689999999999999999999999999999999443
No 294
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.8e-38 Score=327.14 Aligned_cols=252 Identities=20% Similarity=0.304 Sum_probs=202.8
Q ss_pred CCeeEEEEeeccCceEEEEEEECCC-----CcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCc
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLET-----GKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGS 232 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~-----g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~ 232 (665)
.+|++++.||+|+||.||+|.+..+ ++.||||+++... .......+.+|+.++..++||||+++++++.... .
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~-~ 82 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ-P 82 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC-c
Confidence 3688899999999999999987543 5789999987543 3344566889999999999999999999988765 6
Q ss_pred EEEEEEeccccchhhhcC----------------CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCc
Q 006004 233 LYLVFEYMEHDLAGLATT----------------PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGV 296 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~----------------~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~ 296 (665)
+++++||+.+..+..+.. ....+++..+..++.||+.||.|||++||+||||||+|||+++++.
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCc
Confidence 899999998654433321 1235888899999999999999999999999999999999999999
Q ss_pred EEEEecccceecCCCCC-CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 006004 297 LKIGDFGLATTYDPSQN-LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFK 374 (665)
Q Consensus 297 lKL~DFGlA~~~~~~~~-~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~ 374 (665)
+||+|||+++....... .......+++.|+|||++.+ ..++.++|||||||++|||++ |.+||.+.+..+.+..+..
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~ 241 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRN 241 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 99999999886543221 11233356789999999876 568999999999999999998 8899988877766666543
Q ss_pred hcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 375 LCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 375 ~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
.... .....++..+.+||.+||+.||.+||++.++++.
T Consensus 242 ~~~~----------------------------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 242 RQVL----------------------------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred CCcC----------------------------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 2100 0113578889999999999999999999999874
No 295
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=8.1e-38 Score=329.62 Aligned_cols=251 Identities=28% Similarity=0.393 Sum_probs=197.7
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcE--EEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKI--VALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSL 233 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~--vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l 233 (665)
.++|++.+.||+|+||.||+|++..++.. +|+|.+... ........+.+|+.++.++ +||||+++++++.... .+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~-~~ 83 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG-YL 83 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC-Cc
Confidence 45799999999999999999999888865 466665432 2344556788999999999 8999999999987754 79
Q ss_pred EEEEEecccc-chhhhcCC---------------CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcE
Q 006004 234 YLVFEYMEHD-LAGLATTP---------------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVL 297 (665)
Q Consensus 234 ~lV~Ey~~g~-ll~~~~~~---------------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~l 297 (665)
|+||||+.++ +...+... ...+++.+++.++.||+.||+|||++||+||||||+|||++.++.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA 163 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcE
Confidence 9999999865 44433221 2358899999999999999999999999999999999999999999
Q ss_pred EEEecccceecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhc
Q 006004 298 KIGDFGLATTYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLC 376 (665)
Q Consensus 298 KL~DFGlA~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~ 376 (665)
||+|||++........ .....++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+...
T Consensus 164 kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~- 239 (303)
T cd05088 164 KIADFGLSRGQEVYVK--KTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG- 239 (303)
T ss_pred EeCccccCcccchhhh--cccCCCcccccCHHHHhc-cCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcC-
Confidence 9999999864321111 111234667999998865 568999999999999999998 99999887765544433110
Q ss_pred CCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 377 GSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 377 g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
+.. .....+++.+.+||.+||..||.+||++.++|++
T Consensus 240 ------------------~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 240 ------------------YRL---------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred ------------------CcC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 000 0112467889999999999999999999999975
No 296
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.2e-37 Score=316.70 Aligned_cols=246 Identities=27% Similarity=0.422 Sum_probs=202.4
Q ss_pred EEeeccCceEEEEEEECCC---CcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEec
Q 006004 164 DKIGQGTYSSVYKARDLET---GKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYM 240 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~---g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~ 240 (665)
+.||+|+||.||+|.+... +..||+|.++...... ..+.+.+|+.+++.++|+||+++++++... ..+++||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEE-EPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCC-CceEEEEEec
Confidence 3689999999999999866 8899999997654332 467788999999999999999999998874 4799999999
Q ss_pred cccchh-hhcCC--------CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 241 EHDLAG-LATTP--------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 241 ~g~ll~-~~~~~--------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
.++.+. .+... ...+++.+++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++......
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccc
Confidence 765444 44433 367999999999999999999999999999999999999999999999999999877543
Q ss_pred CC-CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcc
Q 006004 312 QN-LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKS 389 (665)
Q Consensus 312 ~~-~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~ 389 (665)
.. .......+++.|+|||.+.. ..++.++|||||||++|+|++ |..||.+.+..+....+... .
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~--~----------- 224 (262)
T cd00192 159 DYYRKKTGGKLPIRWMAPESLKD-GIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKG--Y----------- 224 (262)
T ss_pred cccccccCCCcCccccCHHHhcc-CCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC--C-----------
Confidence 21 11233457889999998876 478999999999999999999 69999988766655554321 0
Q ss_pred ccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 390 AHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 390 ~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
.......+++++.+||.+||..||.+|||+.+++++
T Consensus 225 ---------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 225 ---------------RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred ---------------CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 001123568899999999999999999999999975
No 297
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.2e-37 Score=324.96 Aligned_cols=252 Identities=25% Similarity=0.401 Sum_probs=201.2
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCC-----cEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCC
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETG-----KIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSG 231 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g-----~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~ 231 (665)
++|++.+.||+|+||.||++.+...+ ..+|+|.+.... .......+.+|+.+++++ +|+||+++++++....
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~- 89 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG- 89 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC-
Confidence 47999999999999999999976443 789999987543 334456688999999999 8999999999887654
Q ss_pred cEEEEEEeccccchhhhc----------------CCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCC
Q 006004 232 SLYLVFEYMEHDLAGLAT----------------TPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAG 295 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~----------------~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g 295 (665)
.+|++|||+.++.+..+. .....+++..+..++.||+.||.|||+.||+||||||+|||++.++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~ 169 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDH 169 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCC
Confidence 799999999875444333 2235689999999999999999999999999999999999999999
Q ss_pred cEEEEecccceecCCCCCC-CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 006004 296 VLKIGDFGLATTYDPSQNL-PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIF 373 (665)
Q Consensus 296 ~lKL~DFGlA~~~~~~~~~-~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~ 373 (665)
.+||+|||++..+...... ......++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+....+.
T Consensus 170 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 248 (293)
T cd05053 170 VMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLK 248 (293)
T ss_pred eEEeCccccccccccccceeccCCCCCCccccCHHHhcc-CCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHH
Confidence 9999999999876432211 1122234677999998875 678999999999999999997 999998877655544432
Q ss_pred HhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 374 KLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 374 ~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
... .. ......+..+.+||.+||..||.+|||+.++|++
T Consensus 249 ~~~-------------------~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 249 EGY-------------------RM---------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred cCC-------------------cC---------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 210 00 0112467889999999999999999999999974
No 298
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=8.8e-38 Score=326.20 Aligned_cols=258 Identities=20% Similarity=0.286 Sum_probs=203.3
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCC----------------cEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcce
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETG----------------KIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMK 221 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g----------------~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~ 221 (665)
.+|++++.||+|+||.||+|.+..++ ..||+|.+.... .......+.+|+.++++++||||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 47999999999999999999876644 568999987543 3355677889999999999999999
Q ss_pred eeeeeeccCCcEEEEEEeccccchhhhcCCCC-----------CCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEE
Q 006004 222 LEGLVTSRSGSLYLVFEYMEHDLAGLATTPGI-----------KFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLL 290 (665)
Q Consensus 222 l~~~~~~~~~~l~lV~Ey~~g~ll~~~~~~~~-----------~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNIL 290 (665)
+++++... ..+++||||+.++.+..+..... .+++..+..++.||+.||.|||++||+|+||||+|||
T Consensus 84 ~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nil 162 (296)
T cd05051 84 LLGVCTVD-PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCL 162 (296)
T ss_pred EEEEEecC-CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhcee
Confidence 99998875 47899999998755544433322 6899999999999999999999999999999999999
Q ss_pred EcCCCcEEEEecccceecCCCCC-CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh--CCCCCCCCChHH
Q 006004 291 INNAGVLKIGDFGLATTYDPSQN-LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA--GKPIMPGRTEVE 367 (665)
Q Consensus 291 ld~~g~lKL~DFGlA~~~~~~~~-~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt--G~~pF~g~~~~e 367 (665)
++.++.++|+|||++........ .......+++.|+|||++.+ ..++.++|||||||++|+|++ +..||...+..+
T Consensus 163 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05051 163 VGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLL-GKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQ 241 (296)
T ss_pred ecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhc-CCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHH
Confidence 99999999999999986533221 11233456788999999876 568999999999999999998 678887776666
Q ss_pred HHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 368 QMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 368 ~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.+..+......... . ........++.++.+||.+||+.||.+|||+.++++
T Consensus 242 ~~~~~~~~~~~~~~--------------~-------~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 242 VIENAGHFFRDDGR--------------Q-------IYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred HHHHHHhccccccc--------------c-------ccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 55554332110000 0 000112356789999999999999999999999975
No 299
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=8.7e-38 Score=324.11 Aligned_cols=252 Identities=23% Similarity=0.343 Sum_probs=200.3
Q ss_pred CCeeEEEEeeccCceEEEEEEECC-----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCc
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLE-----TGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGS 232 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~-----~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~ 232 (665)
+.|++.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.++|+||+++++++.... .
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~ 83 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC-SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL-P 83 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-C
Confidence 469999999999999999999987 77889999886433 2334456788999999999999999999887654 6
Q ss_pred EEEEEEeccccchh-hhcCCC------CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCC---cEEEEec
Q 006004 233 LYLVFEYMEHDLAG-LATTPG------IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAG---VLKIGDF 302 (665)
Q Consensus 233 l~lV~Ey~~g~ll~-~~~~~~------~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g---~lKL~DF 302 (665)
.|+||||+.++.+. .+.... ..+++.++..++.||+.||.|||++|++|+||||+|||++.++ .+||+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~df 163 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADF 163 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccC
Confidence 79999999865444 433221 2589999999999999999999999999999999999998765 5999999
Q ss_pred ccceecCCCCC-CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCC
Q 006004 303 GLATTYDPSQN-LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPS 380 (665)
Q Consensus 303 GlA~~~~~~~~-~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~ 380 (665)
|++..+..... ........+..|+|||++.+ ..++.++|||||||++|+|++ |+.||.+.+..+.+..+.... .
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-~-- 239 (277)
T cd05036 164 GMARDIYRASYYRKGGRAMLPIKWMPPEAFLD-GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGG-R-- 239 (277)
T ss_pred ccccccCCccceecCCCCCccHhhCCHHHHhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-c--
Confidence 99987632211 11112233567999999976 568999999999999999997 999999887666554432210 0
Q ss_pred hhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 381 EDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
. .....++..+.+||.+||..||++|||+.++|+|
T Consensus 240 ----------------~---------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 240 ----------------L---------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred ----------------C---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0 0123578899999999999999999999999986
No 300
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.5e-37 Score=321.08 Aligned_cols=252 Identities=20% Similarity=0.291 Sum_probs=201.4
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCC-----CcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCC
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLET-----GKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSG 231 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~-----g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ 231 (665)
.++|++.+.||+|+||.||++.+... +..||+|.+.... .......+.+|+.+|+.++||||+++++++....
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~- 82 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ- 82 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC-
Confidence 35799999999999999999998644 3789999986443 2334456789999999999999999999988754
Q ss_pred cEEEEEEeccccchhhhc-CC---------CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEe
Q 006004 232 SLYLVFEYMEHDLAGLAT-TP---------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGD 301 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~-~~---------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~D 301 (665)
.+|+||||+.++.+..+. .. ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECC
Confidence 789999999865444333 21 22478889999999999999999999999999999999999999999999
Q ss_pred cccceecCCCCC-CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCC
Q 006004 302 FGLATTYDPSQN-LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSP 379 (665)
Q Consensus 302 FGlA~~~~~~~~-~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p 379 (665)
||+++.+..... .......++..|+|||.+.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+.. +..
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~--~~~ 239 (277)
T cd05032 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD-GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVID--GGH 239 (277)
T ss_pred cccchhhccCcccccCCCCCccccccCHHHHhc-CCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhc--CCC
Confidence 999986543321 12233456889999999875 568999999999999999998 9999988776655544421 100
Q ss_pred ChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 380 SEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
......++..+.+||.+||..+|.+|||+.++++
T Consensus 240 --------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 240 --------------------------LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred --------------------------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0011245788999999999999999999999986
No 301
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=8.6e-38 Score=325.34 Aligned_cols=258 Identities=31% Similarity=0.551 Sum_probs=212.2
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
.+.|+....||+|+||.||++.+..++..||+|++..... ....+.+|+++++.++|+||+++++++.... .+|+|
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~lv 93 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVGD-ELWVV 93 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEECC-EEEEE
Confidence 3469999999999999999999998999999999975442 4556788999999999999999999988764 79999
Q ss_pred EEeccccchhhhcCCC-CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 237 FEYMEHDLAGLATTPG-IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~-~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
|||+.+..+..+.... ..+++.++..++.||+.||.|||..||+|+||+|+||+++.++.++|+|||++........ .
T Consensus 94 ~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~ 172 (286)
T cd06614 94 MEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS-K 172 (286)
T ss_pred EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh-h
Confidence 9999965554444433 3799999999999999999999999999999999999999999999999999876543221 1
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
.....++..|+|||++.+ ..++.++|+|||||++|+|++|+.||...+.......+... +.+.
T Consensus 173 ~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~--------------- 235 (286)
T cd06614 173 RNSVVGTPYWMAPEVIKR-KDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK-GIPP--------------- 235 (286)
T ss_pred hccccCCcccCCHhHhcC-CCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCCC---------------
Confidence 233457889999998876 56899999999999999999999999887666555443221 0000
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
......++..+.+||.+||+.||.+|||+.++|.|+||+..
T Consensus 236 ----------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 236 ----------LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred ----------CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 01112477889999999999999999999999999999873
No 302
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.7e-37 Score=321.90 Aligned_cols=251 Identities=22% Similarity=0.305 Sum_probs=200.9
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCc----EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCc
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGK----IVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGS 232 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~----~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~ 232 (665)
.++|++++.||+|+||+||+|++..+|. .||+|+++... .......+.+|+.+++.+.||||+++++++... .
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~ 82 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT-SPKANKEILDEAYVMAGVGSPYVCRLLGICLTS--T 82 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC-CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC--C
Confidence 4579999999999999999999887776 48999987543 344456788999999999999999999988653 5
Q ss_pred EEEEEEeccc-cchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 233 LYLVFEYMEH-DLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 233 l~lV~Ey~~g-~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
.+++|||+++ ++...+......+++.++..++.||+.||.|||++||+||||||+|||+++++.+||+|||++..+...
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~ 162 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDID 162 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccc
Confidence 7899999985 555555444557999999999999999999999999999999999999999999999999999876433
Q ss_pred CCC-CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcc
Q 006004 312 QNL-PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKS 389 (665)
Q Consensus 312 ~~~-~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~ 389 (665)
... ......+++.|+|||.+.+ ..++.++|||||||++|||++ |.+||......+....+.. ...+
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~---------- 230 (279)
T cd05109 163 ETEYHADGGKVPIKWMALESILH-RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK-GERL---------- 230 (279)
T ss_pred cceeecCCCccchhhCCHHHhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-CCcC----------
Confidence 221 1112234678999999876 568999999999999999998 8999977655443332221 1000
Q ss_pred ccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 390 AHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 390 ~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
......+.++.+||.+||..||++||++.+++.
T Consensus 231 -----------------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 231 -----------------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred -----------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 011246788999999999999999999999985
No 303
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=7.6e-38 Score=321.49 Aligned_cols=252 Identities=31% Similarity=0.472 Sum_probs=202.4
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
++|++.+.||.|+||.||++++..+++.||||.+..... .......+.+|+.+++.++||||+++++++.... .++++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-~~~~v 80 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN-ELNIV 80 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCC-eEEEE
Confidence 469999999999999999999999999999998865432 3444567889999999999999999999988754 78999
Q ss_pred EEeccccchhhhcC----CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC
Q 006004 237 FEYMEHDLAGLATT----PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~----~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~ 312 (665)
|||+.++.+..+.. ....+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||++..+....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence 99999754443322 34568999999999999999999999999999999999999999999999999988764332
Q ss_pred CCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChH--HHHHHHHHhcCCCChhHHhhhccc
Q 006004 313 NLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEV--EQMHKIFKLCGSPSEDYWRKSKSA 390 (665)
Q Consensus 313 ~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~--e~l~kI~~~~g~p~~~~~~~~~~~ 390 (665)
. ......++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.... +....+... .
T Consensus 161 ~-~~~~~~~~~~~~ape~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~------------- 224 (267)
T cd08229 161 T-AAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC-D------------- 224 (267)
T ss_pred c-ccccccCCcCccCHHHhcC-CCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC-C-------------
Confidence 1 2234578999999999876 56789999999999999999999999765432 111221110 0
Q ss_pred cccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 391 HATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 391 ~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
+.+ .....++..+.+||.+||..||.+|||+.++++
T Consensus 225 ----~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 225 ----YPP---------LPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred ----CCC---------CCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 000 011247889999999999999999999998764
No 304
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.8e-37 Score=318.15 Aligned_cols=247 Identities=24% Similarity=0.426 Sum_probs=200.6
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|+++++||+|+||.||+|.. .+++.||+|.+...... ...+.+|+.++++++|+||+++++++.. ..+|++|
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~v~ 79 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMS---PEAFLAEANLMKQLQHPRLVRLYAVVTQ--EPIYIIT 79 (260)
T ss_pred HHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCCc---HHHHHHHHHHHHhcCCcCeeeEEEEEcc--CCcEEEE
Confidence 5799999999999999999986 45788999998755433 3457889999999999999999998754 3689999
Q ss_pred Eecccc-chhhhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 238 EYMEHD-LAGLATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 238 Ey~~g~-ll~~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||+.++ +...+.. .+..+++.++..++.||+.||+|||+.|++|+||||+||+++.++.++|+|||++..........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05067 80 EYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred EcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCccc
Confidence 999864 4444433 34578999999999999999999999999999999999999999999999999998765332222
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATS 394 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~ 394 (665)
.....++..|+|||++.. ..++.++|||||||++|+|++ |++||.+.+..+....+......
T Consensus 160 ~~~~~~~~~y~~pe~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---------------- 222 (260)
T cd05067 160 REGAKFPIKWTAPEAINY-GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRM---------------- 222 (260)
T ss_pred ccCCcccccccCHHHhcc-CCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCC----------------
Confidence 233345778999998875 568899999999999999998 99999988766655554221100
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.....++..+.+||.+||..||++|||+.+++.
T Consensus 223 ------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 223 ------------PRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred ------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 011346788999999999999999999999875
No 305
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3.5e-37 Score=315.75 Aligned_cols=252 Identities=33% Similarity=0.513 Sum_probs=202.8
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
++|++.+.||+|+||.||+|.+..+|+.||+|.++.... .......+.+|++++++++|+||+++++++.... ..++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~-~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENN-ELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCC-eEEEE
Confidence 479999999999999999999999999999999875332 3444667889999999999999999999998754 78999
Q ss_pred EEeccccchh-hhc---CCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC
Q 006004 237 FEYMEHDLAG-LAT---TPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 237 ~Ey~~g~ll~-~~~---~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~ 312 (665)
|||+.++.+. .+. .....+++.++..++.||+.||.|||+.||+|+||+|+|||++.++.++|+|||++..+....
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~ 160 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC
Confidence 9999975443 332 234568999999999999999999999999999999999999999999999999988764322
Q ss_pred CCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCCh--HHHHHHHHHhcCCCChhHHhhhccc
Q 006004 313 NLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTE--VEQMHKIFKLCGSPSEDYWRKSKSA 390 (665)
Q Consensus 313 ~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~--~e~l~kI~~~~g~p~~~~~~~~~~~ 390 (665)
. ......+++.|+|||.+.+ ..++.++|+|||||++|+|++|+.||..... .+....+...
T Consensus 161 ~-~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--------------- 223 (267)
T cd08224 161 T-AAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKC--------------- 223 (267)
T ss_pred c-ccceecCCccccCHHHhcc-CCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcC---------------
Confidence 1 2234568999999999876 5689999999999999999999999965431 1112221110
Q ss_pred cccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 391 HATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 391 ~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.+. ..+ ...++..+.+||.+||..+|.+|||+.++++
T Consensus 224 ---~~~-~~~--------~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 224 ---DYP-PLP--------ADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred ---CCC-CCC--------hhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 000 000 1256788999999999999999999999875
No 306
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.4e-37 Score=326.29 Aligned_cols=250 Identities=25% Similarity=0.333 Sum_probs=197.8
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCc--EEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGK--IVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~--~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l~ 234 (665)
++|++.+.||+|+||.||+|++..++. .+++|.++... .....+.+.+|+.++.++ +||||+++++++.... .+|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~-~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA-SENDHRDFAGELEVLCKLGHHPNIINLLGACENRG-YLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC-CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCC-cce
Confidence 479999999999999999999887775 46888776322 334456688999999999 7999999999987654 789
Q ss_pred EEEEeccccch-hhhcCC---------------CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEE
Q 006004 235 LVFEYMEHDLA-GLATTP---------------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLK 298 (665)
Q Consensus 235 lV~Ey~~g~ll-~~~~~~---------------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lK 298 (665)
+||||+.++.+ ..+... ...+++.++..++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEE
Confidence 99999986544 333221 12588999999999999999999999999999999999999999999
Q ss_pred EEecccceecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcC
Q 006004 299 IGDFGLATTYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCG 377 (665)
Q Consensus 299 L~DFGlA~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g 377 (665)
|+|||++........ ......+..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+...++.....
T Consensus 160 l~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~ 236 (297)
T cd05089 160 IADFGLSRGEEVYVK--KTMGRLPVRWMAIESLNY-SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 236 (297)
T ss_pred ECCcCCCccccceec--cCCCCcCccccCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC
Confidence 999999864322111 111123557999998876 568999999999999999997 9999988876665554422100
Q ss_pred CCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 378 SPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 378 ~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
......++..+.+||.+||..||.+|||++++++.
T Consensus 237 ----------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 237 ----------------------------MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred ----------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 01113578899999999999999999999999764
No 307
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=7e-38 Score=320.64 Aligned_cols=249 Identities=22% Similarity=0.342 Sum_probs=204.3
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
..+|++++.||.|+||.||+|++.. +..+|+|++.... ......+.+|+.+++.++||||+++++++.... .+|+|
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~lv 80 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD--LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGE-PVYII 80 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc--hhhHHHHHHHHHHHhcCCCcchhheeeeEecCC-CeEEE
Confidence 3479999999999999999999977 8899999987543 223456889999999999999999999887755 78999
Q ss_pred EEeccccch-hhhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC
Q 006004 237 FEYMEHDLA-GLATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL 314 (665)
Q Consensus 237 ~Ey~~g~ll-~~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~ 314 (665)
|||+.++.+ ..+.. .+..+++.++..++.||+.||.|||++||+|+||||+||||+.++.+||+|||++.........
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~ 160 (261)
T cd05148 81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL 160 (261)
T ss_pred EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence 999987544 44433 3456899999999999999999999999999999999999999999999999999876432221
Q ss_pred CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccccc
Q 006004 315 PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHAT 393 (665)
Q Consensus 315 ~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~ 393 (665)
.....++..|+|||++.+ ..++.++|||||||++|+|++ |+.||.+.+..+.+..+......
T Consensus 161 -~~~~~~~~~~~~PE~~~~-~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--------------- 223 (261)
T cd05148 161 -SSDKKIPYKWTAPEAASH-GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRM--------------- 223 (261)
T ss_pred -ccCCCCceEecCHHHHcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcC---------------
Confidence 123345778999999876 568899999999999999998 89999888776666665431100
Q ss_pred CCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 394 SFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 394 ~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
......++.+.++|.+||..||.+|||+.++++
T Consensus 224 -------------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 224 -------------PCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred -------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 011357888999999999999999999999875
No 308
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.4e-37 Score=324.03 Aligned_cols=264 Identities=25% Similarity=0.413 Sum_probs=205.4
Q ss_pred CeeEEEEeeccCceEEEEEEEC---CCCcEEEEEEEecCCC--CHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCc
Q 006004 159 AFEKIDKIGQGTYSSVYKARDL---ETGKIVALKKVRFANM--DPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGS 232 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~---~~g~~vAiK~i~~~~~--~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~ 232 (665)
+|++.+.||+|+||.||++++. .+++.||||.++.... .......+.+|+.++.++ +||||+++++.+.... .
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~-~ 79 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDT-K 79 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCC-E
Confidence 4889999999999999999864 4678999999875432 122345678899999999 6999999999887754 7
Q ss_pred EEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC
Q 006004 233 LYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~ 312 (665)
+|+||||+.++.+.........+++..++.++.||+.||.|||+.|++|+||||.|||++.++.++|+|||++..+....
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 159 (288)
T cd05583 80 LHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE 159 (288)
T ss_pred EEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccccccc
Confidence 89999999875555444444579999999999999999999999999999999999999999999999999988764433
Q ss_pred CCCcccccccccccCcccccCCc-ccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 313 NLPLTSRVVTLWYRAPELLLGAT-KYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 313 ~~~~~~~~gT~~Y~APE~l~~~~-~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
........|+..|+|||.+.+.. .++.++|+||||+++|+|++|..||...+.......+.+.. ..
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~-------~~------ 226 (288)
T cd05583 160 EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRI-------LK------ 226 (288)
T ss_pred ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHH-------Hc------
Confidence 22223346899999999987532 36889999999999999999999996543222222221110 00
Q ss_pred ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC---HHHHHhCcCCCCCCC
Q 006004 392 ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS---AASALRSEFFKTEPL 448 (665)
Q Consensus 392 ~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT---a~eaL~Hp~f~~~~~ 448 (665)
. .......++..+.+||.+||+.||++||| +.++|+||||+...+
T Consensus 227 --~----------~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~ 274 (288)
T cd05583 227 --S----------KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDW 274 (288)
T ss_pred --c----------CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCH
Confidence 0 00112347788999999999999999998 567799999987543
No 309
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=3.1e-37 Score=315.92 Aligned_cols=249 Identities=24% Similarity=0.389 Sum_probs=202.4
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
.++|++.+.||+|+||.||+|.+. ++..||||.+...... ...+.+|+.++++++|+||+++++++.... .+|+|
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~v 79 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMS---PEAFLQEAQIMKKLRHDKLVQLYAVCSEEE-PIYIV 79 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccC---HHHHHHHHHHHhhCCCCCEeeeeeeeecCC-ceEEE
Confidence 357999999999999999999975 4578999998755433 345788999999999999999999987654 78999
Q ss_pred EEeccccch-hhhcCC-CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC
Q 006004 237 FEYMEHDLA-GLATTP-GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL 314 (665)
Q Consensus 237 ~Ey~~g~ll-~~~~~~-~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~ 314 (665)
|||+.++.+ ..+... +..+++.++..++.||+.||.|||++||+|+||||+||||+.++.+||+|||++..+......
T Consensus 80 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 159 (261)
T cd05034 80 TEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT 159 (261)
T ss_pred EeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhh
Confidence 999987544 444332 246899999999999999999999999999999999999999999999999999876532211
Q ss_pred CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccccc
Q 006004 315 PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHAT 393 (665)
Q Consensus 315 ~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~ 393 (665)
......++..|+|||.+.+ ..++.++|+|||||++|+|++ |+.||.+.+....+.++......+
T Consensus 160 ~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~-------------- 224 (261)
T cd05034 160 AREGAKFPIKWTAPEAANY-GRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMP-------------- 224 (261)
T ss_pred hhhccCCCccccCHHHhcc-CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC--------------
Confidence 1122234678999999876 568999999999999999998 999999888777666654321100
Q ss_pred CCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 394 SFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 394 ~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.....+..+.++|.+||..||.+||++.++++
T Consensus 225 --------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 225 --------------RPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred --------------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 01245788999999999999999999999874
No 310
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.5e-39 Score=350.28 Aligned_cols=253 Identities=26% Similarity=0.423 Sum_probs=215.5
Q ss_pred eEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC--CHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-CCcEEEEE
Q 006004 161 EKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM--DPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-SGSLYLVF 237 (665)
Q Consensus 161 ~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~--~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-~~~l~lV~ 237 (665)
+.-..||+|+|-+||+|.|..+|..||.-.++...+ .++..++|..|+.+|+.|+|||||++|++|.+. +..+.+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 344689999999999999999999999776655433 566778999999999999999999999999876 44588999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCC--ccccCCCcccEEEcC-CCcEEEEecccceecCCCCCC
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRG--ILHRDIKGSNLLINN-AGVLKIGDFGLATTYDPSQNL 314 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~g--IiHrDLKPeNILld~-~g~lKL~DFGlA~~~~~~~~~ 314 (665)
|++..+.+..+..+.+.+....++.|++||+.||.|||++. |||||||.+||+|+. .|.|||+|+|||.......
T Consensus 123 EL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~-- 200 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH-- 200 (632)
T ss_pred ecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccc--
Confidence 99998888888887778999999999999999999999994 999999999999984 5999999999999876543
Q ss_pred CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCC-CChHHHHHHHHHhcCCCChhHHhhhcccccc
Q 006004 315 PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPG-RTEVEQMHKIFKLCGSPSEDYWRKSKSAHAT 393 (665)
Q Consensus 315 ~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g-~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~ 393 (665)
..+.+|||.|||||++. ..|+..+||||||++++||+|+..||.. .+..++++++.. |..+..+.
T Consensus 201 -aksvIGTPEFMAPEmYE--E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~S--GiKP~sl~--------- 266 (632)
T KOG0584|consen 201 -AKSVIGTPEFMAPEMYE--ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTS--GIKPAALS--------- 266 (632)
T ss_pred -cceeccCccccChHHHh--hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHc--CCCHHHhh---------
Confidence 35579999999999997 5799999999999999999999999974 455555666544 33333221
Q ss_pred CCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 394 SFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 394 ~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
+--.+++++||.+||.. ...|+|+.|+|.||||...
T Consensus 267 ----------------kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 267 ----------------KVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred ----------------ccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 12367899999999999 9999999999999999865
No 311
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.9e-37 Score=314.65 Aligned_cols=246 Identities=31% Similarity=0.483 Sum_probs=204.0
Q ss_pred eeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEeccccc
Q 006004 166 IGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEHDL 244 (665)
Q Consensus 166 LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g~l 244 (665)
||.|+||.||++.+..+++.||+|.++.... .......+.+|+.++++++||||+++++.+.... .+|+||||+.++.
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEE-KLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCC-eeEEEEecCCCCc
Confidence 6899999999999998999999999876543 2335667889999999999999999999987754 7899999996654
Q ss_pred hhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccccccccc
Q 006004 245 AGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVVTLW 324 (665)
Q Consensus 245 l~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~gT~~ 324 (665)
+.........+++.++..++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||++....... .......++..
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~ 158 (250)
T cd05123 80 LFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNTFCGTPE 158 (250)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccCCcCCcc
Confidence 44444444479999999999999999999999999999999999999999999999999998764432 12334567899
Q ss_pred ccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhh
Q 006004 325 YRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRK 404 (665)
Q Consensus 325 Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~ 404 (665)
|+|||.+.+ ..++.++|+|||||++|+|++|..||...+..+....+... ..
T Consensus 159 ~~~Pe~~~~-~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~--~~------------------------- 210 (250)
T cd05123 159 YLAPEVLLG-KGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKD--PL------------------------- 210 (250)
T ss_pred ccChHHhCC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC--CC-------------------------
Confidence 999999876 45788999999999999999999999877764444444320 00
Q ss_pred hhhhccCCcHHHHHHHHHhcccCcCCCcCH---HHHHhCcCC
Q 006004 405 VLETFRNFPQSALALVDKLLTIEPENRGSA---ASALRSEFF 443 (665)
Q Consensus 405 ~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa---~eaL~Hp~f 443 (665)
.....++..+.+||.+||..||++|||+ .++++||||
T Consensus 211 --~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 211 --RFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred --CCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 1112458889999999999999999999 999999998
No 312
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=330.87 Aligned_cols=283 Identities=27% Similarity=0.437 Sum_probs=219.3
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCC-----C---CCcceeeeeeecc
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLD-----H---PNVMKLEGLVTSR 229 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~-----H---pnIV~l~~~~~~~ 229 (665)
.+|.+.++||.|.|++||+|.|..+.+.||+|+++-+. ...+....||.+|+++. | ..||+|++.|...
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq---hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs 154 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ---HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS 154 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh---HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence 48999999999999999999999999999999998543 34455678999999983 3 4699999999754
Q ss_pred ---CCcEEEEEEeccccchhhhcCCC-CCCChhHHHHHHHHHHHHHHHHHhC-CccccCCCcccEEEcCCC---------
Q 006004 230 ---SGSLYLVFEYMEHDLAGLATTPG-IKFTEPQIKCYMQQLLRGLEHCHSR-GILHRDIKGSNLLINNAG--------- 295 (665)
Q Consensus 230 ---~~~l~lV~Ey~~g~ll~~~~~~~-~~lse~~i~~i~~QIl~aL~~LH~~-gIiHrDLKPeNILld~~g--------- 295 (665)
..++|+|+|++..+|+.++.... ..++...++.|++|||.||+|||.. ||||-||||+|||+..+.
T Consensus 155 GpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~~~~~~~~~ 234 (590)
T KOG1290|consen 155 GPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEIDPAKDARE 234 (590)
T ss_pred CCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeeccccchhhhhhh
Confidence 45799999999999999888754 4599999999999999999999976 999999999999992110
Q ss_pred --------------------------------------------------------------------------------
Q 006004 296 -------------------------------------------------------------------------------- 295 (665)
Q Consensus 296 -------------------------------------------------------------------------------- 295 (665)
T Consensus 235 a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~~~ 314 (590)
T KOG1290|consen 235 AGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGNES 314 (590)
T ss_pred hccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCcccc
Confidence
Q ss_pred -----------------------------------------------------------------------------cEE
Q 006004 296 -----------------------------------------------------------------------------VLK 298 (665)
Q Consensus 296 -----------------------------------------------------------------------------~lK 298 (665)
.+|
T Consensus 315 ~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~vK 394 (590)
T KOG1290|consen 315 TVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIRVK 394 (590)
T ss_pred chhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCccceeEE
Confidence 134
Q ss_pred EEecccceecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCC------ChHHHHHHH
Q 006004 299 IGDFGLATTYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGR------TEVEQMHKI 372 (665)
Q Consensus 299 L~DFGlA~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~------~~~e~l~kI 372 (665)
|+|||-|+-+.. .++.-+-|..|+|||++++ ..|++.+||||++|++|||+||..+|... .+.+.++.|
T Consensus 395 IaDlGNACW~~k----hFT~DIQTRQYRapEVllG-sgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i 469 (590)
T KOG1290|consen 395 IADLGNACWVHK----HFTEDIQTRQYRAPEVLLG-SGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALI 469 (590)
T ss_pred Eeeccchhhhhh----hhchhhhhhhccCcceeec-CCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHH
Confidence 555555543321 1233455899999999998 57999999999999999999999999643 357889999
Q ss_pred HHhcCCCChhH----------Hhhh-ccccccCCCCCCcchhhhhhhcc---CCcHHHHHHHHHhcccCcCCCcCHHHHH
Q 006004 373 FKLCGSPSEDY----------WRKS-KSAHATSFKPQQPYKRKVLETFR---NFPQSALALVDKLLTIEPENRGSAASAL 438 (665)
Q Consensus 373 ~~~~g~p~~~~----------~~~~-~~~~~~~~~~~~p~~~~~~~~~~---~~s~~a~dLI~~lL~~DP~~RpTa~eaL 438 (665)
+.++|..+..+ |++. .+.+...++ ..|....+.+.+. .-..++.+||.-||+.+|++|+||.++|
T Consensus 470 ~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK-~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl 548 (590)
T KOG1290|consen 470 MELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLK-PWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCL 548 (590)
T ss_pred HHHHhhccHHHHhcCcchHhhhccccceecccccC-CCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHh
Confidence 99998876543 3321 122222222 2344444444442 1234578899999999999999999999
Q ss_pred hCcCCCCCCCC
Q 006004 439 RSEFFKTEPLP 449 (665)
Q Consensus 439 ~Hp~f~~~~~~ 449 (665)
+|||+...+.+
T Consensus 549 ~hPwLn~~~~~ 559 (590)
T KOG1290|consen 549 KHPWLNPVAGP 559 (590)
T ss_pred cCccccCCCCC
Confidence 99999977655
No 313
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=6e-37 Score=349.92 Aligned_cols=277 Identities=23% Similarity=0.319 Sum_probs=190.3
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCC----CcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeee----e
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLET----GKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLV----T 227 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~----g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~----~ 227 (665)
..++|++.+.||+|+||.||+|++..+ +..||||++..... .+.+..| .++...+.+++.+...+ .
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~----~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~ 203 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA----VEIWMNE--RVRRACPNSCADFVYGFLEPVS 203 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch----hHHHHHH--HHHhhchhhHHHHHHhhhcccc
Confidence 567899999999999999999999988 99999998764321 1111111 12222233333222221 1
Q ss_pred -ccCCcEEEEEEeccccchhhhcC-CCC-------------------CCChhHHHHHHHHHHHHHHHHHhCCccccCCCc
Q 006004 228 -SRSGSLYLVFEYMEHDLAGLATT-PGI-------------------KFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKG 286 (665)
Q Consensus 228 -~~~~~l~lV~Ey~~g~ll~~~~~-~~~-------------------~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKP 286 (665)
.....++|||||+.++.+..+.. ... ...+..+..++.||+.||.|||++||+||||||
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP 283 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKP 283 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCH
Confidence 23447899999998765443332 211 122345778999999999999999999999999
Q ss_pred ccEEEcC-CCcEEEEecccceecCCCCCCCcccccccccccCcccccCCc---------------------ccCcccchh
Q 006004 287 SNLLINN-AGVLKIGDFGLATTYDPSQNLPLTSRVVTLWYRAPELLLGAT---------------------KYGAAIDMW 344 (665)
Q Consensus 287 eNILld~-~g~lKL~DFGlA~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~---------------------~~~~~sDIW 344 (665)
+||||+. ++.+||+|||+|..+..........+++|+.|+|||.+.... .++.++|||
T Consensus 284 ~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVw 363 (566)
T PLN03225 284 QNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIY 363 (566)
T ss_pred HHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccH
Confidence 9999985 589999999999876544444445678999999999764321 234567999
Q ss_pred hhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhc
Q 006004 345 SAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLL 424 (665)
Q Consensus 345 SLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL 424 (665)
|||||||||+++. |+..+...++.+++..++.... .|.+..... ..+......+.+......+.+||.+||
T Consensus 364 SlGviL~el~~~~--~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~------~~~~~~~~~~~~d~~~~~~~dLi~~mL 434 (566)
T PLN03225 364 SAGLIFLQMAFPN--LRSDSNLIQFNRQLKRNDYDLV-AWRKLVEPR------ASPDLRRGFEVLDLDGGAGWELLKSMM 434 (566)
T ss_pred HHHHHHHHHHhCc--CCCchHHHHHHHHHHhcCCcHH-HHHHhhccc------cchhhhhhhhhccccchHHHHHHHHHc
Confidence 9999999999854 5556666666666665554333 333221110 011111112223334556789999999
Q ss_pred ccCcCCCcCHHHHHhCcCCCCCC
Q 006004 425 TIEPENRGSAASALRSEFFKTEP 447 (665)
Q Consensus 425 ~~DP~~RpTa~eaL~Hp~f~~~~ 447 (665)
.+||.+|||+.++|+||||....
T Consensus 435 ~~dP~kR~ta~e~L~Hpff~~~~ 457 (566)
T PLN03225 435 RFKGRQRISAKAALAHPYFDREG 457 (566)
T ss_pred cCCcccCCCHHHHhCCcCcCCCC
Confidence 99999999999999999998753
No 314
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.1e-37 Score=316.71 Aligned_cols=247 Identities=24% Similarity=0.380 Sum_probs=199.3
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++.+.||+|+||.||+|.+..+ ..+|+|.+...... .+.+.+|+.++++++||||+++++++.. ...|+||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~v~ 79 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMM---PEAFLQEAQIMKKLRHDKLVPLYAVVSE--EPIYIVT 79 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCcc---HHHHHHHHHHHHhCCCCCeeeEEEEEcC--CCcEEEE
Confidence 4699999999999999999997655 45999988654322 3457789999999999999999998754 3579999
Q ss_pred Eeccc-cchhhhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 238 EYMEH-DLAGLATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 238 Ey~~g-~ll~~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||+.+ ++...+.. ....+++..+..++.||+.||.|||+.||+|+||||+|||+++++.++|+|||++..........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~ 159 (260)
T cd05069 80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTA 159 (260)
T ss_pred EcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccc
Confidence 99987 45555543 23458899999999999999999999999999999999999999999999999998764332222
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATS 394 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~ 394 (665)
.....++..|+|||.+.+ ..++.++|||||||++|+|++ |+.||.+.+..+....+.... .
T Consensus 160 ~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~---------------- 221 (260)
T cd05069 160 RQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGY-R---------------- 221 (260)
T ss_pred cCCCccchhhCCHHHhcc-CCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-C----------------
Confidence 223345778999998875 568999999999999999999 999999887766665543210 0
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
. .....++..+.+||.+||.+||.+||++.++++
T Consensus 222 --~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 222 --M---------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred --C---------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0 011357888999999999999999999999875
No 315
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.9e-37 Score=362.89 Aligned_cols=255 Identities=25% Similarity=0.324 Sum_probs=201.9
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
++|+++++||+|+||.||+|++..+|+.||||+++.... .....+.+.+|+.++++++||||+++++++.... ..|+|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~-~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGD-PVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCC-EEEEE
Confidence 479999999999999999999999999999999975432 3344567889999999999999999999987754 78999
Q ss_pred EEeccccchhhhcCC-----------CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccc
Q 006004 237 FEYMEHDLAGLATTP-----------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLA 305 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~-----------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA 305 (665)
|||++|+.+..+... ...++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcc
Confidence 999998655433321 124566788999999999999999999999999999999999999999999999
Q ss_pred eecCCCC-----------------CCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHH
Q 006004 306 TTYDPSQ-----------------NLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQ 368 (665)
Q Consensus 306 ~~~~~~~-----------------~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~ 368 (665)
....... .......+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.
T Consensus 161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g-~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki 239 (932)
T PRK13184 161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG-VPASESTDIYALGVILYQMLTLSFPYRRKKGRKI 239 (932)
T ss_pred eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC-CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhh
Confidence 8762110 001123579999999999886 5689999999999999999999999987554332
Q ss_pred HHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 369 MHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 369 l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
.... ....+ . ....+..+++.+.+++.+||..||.+|++..++|.+
T Consensus 240 ~~~~--~i~~P-~-----------------------~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~ 285 (932)
T PRK13184 240 SYRD--VILSP-I-----------------------EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQ 285 (932)
T ss_pred hhhh--hccCh-h-----------------------hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 2211 00000 0 001123678899999999999999999988777765
No 316
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-40 Score=377.70 Aligned_cols=259 Identities=31% Similarity=0.538 Sum_probs=220.5
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
+++...+||.|.||.||-|.+..+|...|+|.++...........+.+|+.+|..|+|||||+++++-..++ .+||.||
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRe-kv~IFME 1314 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHRE-KVYIFME 1314 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHH-HHHHHHH
Confidence 355667899999999999999999999999999876555556677899999999999999999999766654 7899999
Q ss_pred eccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC---CC
Q 006004 239 YMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN---LP 315 (665)
Q Consensus 239 y~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~---~~ 315 (665)
||.++.+..+...+.-++|...+-|..|++.||.|||+.|||||||||+||||+.+|.+|++|||.|..+..... ..
T Consensus 1315 yC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~e 1394 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGE 1394 (1509)
T ss_pred HhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHH
Confidence 999999998888887888999999999999999999999999999999999999999999999999998865421 23
Q ss_pred cccccccccccCcccccCC--cccCcccchhhhHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCChhHHhhhccccc
Q 006004 316 LTSRVVTLWYRAPELLLGA--TKYGAAIDMWSAGCILAELFAGKPIMPGRTE-VEQMHKIFKLCGSPSEDYWRKSKSAHA 392 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~--~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~-~e~l~kI~~~~g~p~~~~~~~~~~~~~ 392 (665)
+...+||+.|||||++.+. ...+-++||||||||+.||+||+.||...+. +.++.+...
T Consensus 1395 l~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~------------------ 1456 (1509)
T KOG4645|consen 1395 LQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAA------------------ 1456 (1509)
T ss_pred HHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhc------------------
Confidence 4567899999999999864 3456789999999999999999999976554 444443322
Q ss_pred cCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 393 TSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 393 ~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
...|+.| ..++++.++||++||..||.+|.++.|+|.|.|-+..
T Consensus 1457 -gh~Pq~P---------~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1457 -GHKPQIP---------ERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSC 1500 (1509)
T ss_pred -cCCCCCc---------hhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccc
Confidence 2233333 2489999999999999999999999999999997754
No 317
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=3e-37 Score=318.03 Aligned_cols=251 Identities=24% Similarity=0.363 Sum_probs=202.6
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCc---EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGK---IVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~---~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~ 234 (665)
.+|++.+.||+|+||.||+|++..++. .+|+|.++... .......+.+|+.++++++||||+++++++.... .+|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~ 81 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSK-PVM 81 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC-ccE
Confidence 479999999999999999999875543 79999886543 3345667889999999999999999999987654 789
Q ss_pred EEEEeccccch-hhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC
Q 006004 235 LVFEYMEHDLA-GLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 235 lV~Ey~~g~ll-~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~ 313 (665)
+||||+.++.+ ..+......+++.++..++.||+.||.|||++||+||||||+|||++.++.++|+|||++..+.....
T Consensus 82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 161 (267)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccc
Confidence 99999987544 44444445789999999999999999999999999999999999999999999999999987654322
Q ss_pred CCc--ccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccc
Q 006004 314 LPL--TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSA 390 (665)
Q Consensus 314 ~~~--~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~ 390 (665)
... ....++..|+|||++.+ ..++.++|+|||||++|+|++ |..||.+.+..+....+......
T Consensus 162 ~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~------------ 228 (267)
T cd05066 162 AAYTTRGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRL------------ 228 (267)
T ss_pred eeeecCCCccceeecCHhHhcc-CccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcC------------
Confidence 111 11223568999999976 568999999999999999886 99999887766655554321100
Q ss_pred cccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 391 HATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 391 ~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.....+++.+.+||.+||+.+|.+||++.++++
T Consensus 229 ----------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 229 ----------------PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred ----------------CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 011246888999999999999999999999975
No 318
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=4.2e-37 Score=316.51 Aligned_cols=251 Identities=22% Similarity=0.340 Sum_probs=203.6
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCc---EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGK---IVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~---~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~ 234 (665)
++|+..+.||+|+||.||+|++..++. .+|+|.++... .....+.+..|+.++++++||||+++++++.... ..|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~ 82 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK-PAM 82 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC-CcE
Confidence 468999999999999999999877665 79999886543 2344566889999999999999999999988754 789
Q ss_pred EEEEeccccchhhhc-CCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC
Q 006004 235 LVFEYMEHDLAGLAT-TPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~-~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~ 313 (665)
+||||+.++.+..+. .....+++.++..++.|++.||.|||+.||+|+||||+|||++.++.+||+|||++........
T Consensus 83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 162 (268)
T cd05063 83 IITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPE 162 (268)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccc
Confidence 999999976555444 3445789999999999999999999999999999999999999999999999999987643322
Q ss_pred CCccc--ccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccc
Q 006004 314 LPLTS--RVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSA 390 (665)
Q Consensus 314 ~~~~~--~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~ 390 (665)
..... ...++.|+|||++.+ ..++.++|||||||++|+|++ |+.||...+..+....+......+
T Consensus 163 ~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~----------- 230 (268)
T cd05063 163 GTYTTSGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLP----------- 230 (268)
T ss_pred cceeccCCCcCceecCHHHhhc-CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCC-----------
Confidence 21111 122457999999876 568999999999999999997 999998877766666654321100
Q ss_pred cccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 391 HATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 391 ~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.....+..+.+||.+||..||.+||++.++++
T Consensus 231 -----------------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 231 -----------------APMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred -----------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 01246788999999999999999999999986
No 319
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3.4e-37 Score=315.52 Aligned_cols=244 Identities=23% Similarity=0.312 Sum_probs=195.5
Q ss_pred EEeeccCceEEEEEEECCCC---cEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEec
Q 006004 164 DKIGQGTYSSVYKARDLETG---KIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYM 240 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g---~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~ 240 (665)
++||+|+||.||+|++..++ ..||+|.+...... ...+.+.+|+.+++.++||||+++++++.. ..+++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCKG--EPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcC--CceEEEEEeC
Confidence 46999999999999876655 78999998765443 345668899999999999999999998764 3589999999
Q ss_pred cccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccc--
Q 006004 241 EHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTS-- 318 (665)
Q Consensus 241 ~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~-- 318 (665)
.++.+..+......+++..+..++.||+.||.|||..||+|+||||+|||++.++.+||+|||++..+..........
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~ 157 (257)
T cd05060 78 PLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTA 157 (257)
T ss_pred CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccC
Confidence 875555444444479999999999999999999999999999999999999999999999999998764433211111
Q ss_pred ccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCC
Q 006004 319 RVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKP 397 (665)
Q Consensus 319 ~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~ 397 (665)
..++..|+|||.+.+ ..++.++|||||||++|+|++ |.+||...+..+....+.... +
T Consensus 158 ~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~--~------------------ 216 (257)
T cd05060 158 GRWPLKWYAPECINY-GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE--R------------------ 216 (257)
T ss_pred ccccccccCHHHhcC-CCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC--c------------------
Confidence 123467999998876 568999999999999999998 999998877655544442210 0
Q ss_pred CCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 398 QQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 398 ~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
......++..+.+||.+||..||.+||++.++++
T Consensus 217 --------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 217 --------LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred --------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 0112356788999999999999999999999875
No 320
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.8e-37 Score=333.32 Aligned_cols=254 Identities=25% Similarity=0.383 Sum_probs=197.8
Q ss_pred CCeeEEEEeeccCceEEEEEEE-----CCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCC
Q 006004 158 DAFEKIDKIGQGTYSSVYKARD-----LETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSG 231 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~-----~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~ 231 (665)
++|++.+.||+|+||.||+|++ ..+++.||||+++... .......+.+|+.+|.++ +||||+++++++.....
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC-ChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 5799999999999999999985 3567899999997543 234456788999999999 68999999998876666
Q ss_pred cEEEEEEeccccchhhhcCC------------------------------------------------------------
Q 006004 232 SLYLVFEYMEHDLAGLATTP------------------------------------------------------------ 251 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~~~------------------------------------------------------------ 251 (665)
.+++||||+.++.+..+...
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 78999999997554433211
Q ss_pred -------CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC-CCcccccccc
Q 006004 252 -------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN-LPLTSRVVTL 323 (665)
Q Consensus 252 -------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~-~~~~~~~gT~ 323 (665)
...+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+..... .......++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 245 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 245 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCc
Confidence 12367888999999999999999999999999999999999999999999999987532221 1112234567
Q ss_pred cccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcch
Q 006004 324 WYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYK 402 (665)
Q Consensus 324 ~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~ 402 (665)
.|+|||++.+ ..++.++|||||||++|+|++ |..||.+......+...... +. ..
T Consensus 246 ~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~-----------------~~----- 301 (343)
T cd05103 246 KWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GT-----------------RM----- 301 (343)
T ss_pred ceECcHHhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhc-cC-----------------CC-----
Confidence 8999999876 568999999999999999997 99999876443332222110 00 00
Q ss_pred hhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 403 RKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 403 ~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
......++.+.+++..||..||.+|||+.++++|
T Consensus 302 ----~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 302 ----RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred ----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 0011356789999999999999999999999986
No 321
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=4.5e-37 Score=313.75 Aligned_cols=249 Identities=27% Similarity=0.398 Sum_probs=201.1
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
.+|++.+.||+|+||.||++.+. ++..+|+|++...... ...+.+|++++++++||||+++++++.... ..|+||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~~v~ 78 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTERS-PICLVF 78 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEccCC-ceEEEE
Confidence 46999999999999999999885 4678999998754433 234678999999999999999999987755 789999
Q ss_pred Eeccccchhhhc-CCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 238 EYMEHDLAGLAT-TPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 238 Ey~~g~ll~~~~-~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
||+.++.+..+. .....+++..++.++.||+.||.|||+.|++|+||||+||+++.++.+||+|||++...........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (256)
T cd05112 79 EFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSS 158 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCccccc
Confidence 999976655444 3345689999999999999999999999999999999999999999999999999986543221111
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
....++..|+|||++.+ ..++.++|||||||++|+|++ |.+||......+.+..+.....
T Consensus 159 ~~~~~~~~~~aPe~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~------------------ 219 (256)
T cd05112 159 TGTKFPVKWSSPEVFSF-SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFR------------------ 219 (256)
T ss_pred CCCccchhhcCHhHhcc-CCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCC------------------
Confidence 22234678999998876 568899999999999999998 9999988776665555432100
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
. ......+..+.+|+.+||..||++|||+.+++++
T Consensus 220 -~---------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 220 -L---------YKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred -C---------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 0 0012357889999999999999999999999874
No 322
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=3.9e-37 Score=314.94 Aligned_cols=243 Identities=22% Similarity=0.402 Sum_probs=197.3
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++.+.||+|+||.||++.. .|..||+|.++... ..+.+.+|+.++++++|+||+++++++......+|+||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCc----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEE
Confidence 4799999999999999999976 47789999986432 24567899999999999999999998765555789999
Q ss_pred Eeccc-cchhhhcCCC-CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 238 EYMEH-DLAGLATTPG-IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 238 Ey~~g-~ll~~~~~~~-~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||+.+ .+...+.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--- 156 (256)
T cd05082 80 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--- 156 (256)
T ss_pred ECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccC---
Confidence 99986 4444444333 348899999999999999999999999999999999999999999999999988654322
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATS 394 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~ 394 (665)
....++..|+|||++.+ ..++.++|||||||++|+|++ |+.||...+..+....+.+..
T Consensus 157 -~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~------------------ 216 (256)
T cd05082 157 -DTGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY------------------ 216 (256)
T ss_pred -CCCccceeecCHHHHcc-CCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC------------------
Confidence 22344678999998876 568899999999999999997 999998776555544442210
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.+ .....+++.+.+||.+||..||.+|||+.++++
T Consensus 217 -~~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 217 -KM---------DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred -CC---------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 00 111357889999999999999999999999975
No 323
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=4.2e-37 Score=319.87 Aligned_cols=251 Identities=18% Similarity=0.284 Sum_probs=198.4
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcE----EEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCc
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKI----VALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGS 232 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~----vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~ 232 (665)
.++|++++.||+|+||+||+|++..++.. |++|.+.... .......+..|+.++.+++||||+++++++.. ..
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~--~~ 82 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS-GRQTFQEITDHMLAMGSLDHAYIVRLLGICPG--AS 82 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc-chHHHHHHHHHHHHHhcCCCCCcceEEEEECC--Cc
Confidence 35799999999999999999999887764 6777764322 23344567889999999999999999998753 35
Q ss_pred EEEEEEeccc-cchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 233 LYLVFEYMEH-DLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 233 l~lV~Ey~~g-~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
+++++||+.+ ++...+......+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++..+...
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 7899999985 555555555567999999999999999999999999999999999999999999999999999876433
Q ss_pred CCC-CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcc
Q 006004 312 QNL-PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKS 389 (665)
Q Consensus 312 ~~~-~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~ 389 (665)
... ......++..|+|||.+.+ ..++.++|||||||++|||++ |..||.+.........+ .....+
T Consensus 163 ~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~-~~~~~~---------- 230 (279)
T cd05111 163 DKKYFYSEHKTPIKWMALESILF-GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLL-EKGERL---------- 230 (279)
T ss_pred CcccccCCCCCcccccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-HCCCcC----------
Confidence 221 1233456778999999876 568999999999999999998 99999887654433222 110000
Q ss_pred ccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 390 AHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 390 ~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
......+.++.++|.+|+..||.+|||+.++++
T Consensus 231 -----------------~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 231 -----------------AQPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred -----------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 001134667899999999999999999999976
No 324
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-38 Score=344.48 Aligned_cols=253 Identities=23% Similarity=0.356 Sum_probs=208.3
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
+.+.+...||+|.||+||+|++..+ ||||++......++..+.|++|+.+|++-+|.||+-+.+++.... +.||+
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~--~AIiT 466 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP--LAIIT 466 (678)
T ss_pred HHhhccceeccccccceeecccccc---eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc--eeeee
Confidence 4578889999999999999999653 999999998888899999999999999999999999999998654 59999
Q ss_pred Eecccc-chhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCC-CCCCC
Q 006004 238 EYMEHD-LAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDP-SQNLP 315 (665)
Q Consensus 238 Ey~~g~-ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~-~~~~~ 315 (665)
-+|+|. |+..+.....+|.....+.|++||+.|+.|||.++|||||||..||||.+++.|||+||||+..-.. .....
T Consensus 467 qwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q 546 (678)
T KOG0193|consen 467 QWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQ 546 (678)
T ss_pred hhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeeccccc
Confidence 999995 5556666667899999999999999999999999999999999999999999999999999975321 12223
Q ss_pred cccccccccccCcccccC--CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccccc
Q 006004 316 LTSRVVTLWYRAPELLLG--ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHAT 393 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~--~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~ 393 (665)
+....|...|||||++.. ..+|++.+||||||||+|||++|..||...+...++-.+-+..+.|.
T Consensus 547 ~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd------------- 613 (678)
T KOG0193|consen 547 LEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPD------------- 613 (678)
T ss_pred cCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCcc-------------
Confidence 444567889999999963 46899999999999999999999999984433322222211111110
Q ss_pred CCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 394 SFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 394 ~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
+.....+-++++++|+..|+.+++++||+..++|.
T Consensus 614 -----------~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 614 -----------LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred -----------chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 11223356789999999999999999999999986
No 325
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=4.1e-37 Score=324.39 Aligned_cols=252 Identities=21% Similarity=0.345 Sum_probs=200.3
Q ss_pred CCeeEEEEeeccCceEEEEEEEC-----CCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCC
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDL-----ETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSG 231 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~-----~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~ 231 (665)
++|++.+.||+|+||.||++.+. .++..||+|+++... .....+.+.+|+.+++++ +||||+++++++....
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~- 112 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-HSSEREALMSELKIMSHLGNHENIVNLLGACTIGG- 112 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-ChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC-
Confidence 47999999999999999999863 345689999887543 234456788999999999 7999999999987754
Q ss_pred cEEEEEEeccccch-hhhcCC-CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecC
Q 006004 232 SLYLVFEYMEHDLA-GLATTP-GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYD 309 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll-~~~~~~-~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~ 309 (665)
.+|+||||+.++.+ ..+... ...+++.++..++.||+.||.|||++||+|+||||+|||++.++.+||+|||++..+.
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 192 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIM 192 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccccccc
Confidence 78999999986544 444332 2348999999999999999999999999999999999999999999999999998654
Q ss_pred CCCCC-CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhh
Q 006004 310 PSQNL-PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKS 387 (665)
Q Consensus 310 ~~~~~-~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~ 387 (665)
..... ......+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||.+....+...++....
T Consensus 193 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~----------- 260 (302)
T cd05055 193 NDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEG----------- 260 (302)
T ss_pred CCCceeecCCCCcccccCCHhhhcc-CCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcC-----------
Confidence 32211 1122345788999999876 568999999999999999998 999998876655444432210
Q ss_pred ccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 388 KSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 388 ~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
+.. .....+++.+.+||.+||..||++|||+.++++
T Consensus 261 -------~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 261 -------YRM---------AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred -------CcC---------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 000 011246788999999999999999999999986
No 326
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=4e-37 Score=321.72 Aligned_cols=250 Identities=23% Similarity=0.339 Sum_probs=199.9
Q ss_pred CCeeEEEEeeccCceEEEEEEEC-----CCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCc
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDL-----ETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGS 232 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~-----~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~ 232 (665)
.+|.+.+.||+|+||.||+|++. .++..+++|.+.... ....+.+.+|++++++++||||+++++++.... .
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 81 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT--LAARKDFQREAELLTNLQHEHIVKFYGVCGDGD-P 81 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc--HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC-c
Confidence 36999999999999999999854 345678999876432 344466889999999999999999999988754 7
Q ss_pred EEEEEEeccccchhhhcCC----------------CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCc
Q 006004 233 LYLVFEYMEHDLAGLATTP----------------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGV 296 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~~----------------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~ 296 (665)
+++||||+.++.+..+... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLL 161 (291)
T ss_pred eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc
Confidence 8999999987555443321 234899999999999999999999999999999999999999999
Q ss_pred EEEEecccceecCCCCC-CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 006004 297 LKIGDFGLATTYDPSQN-LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFK 374 (665)
Q Consensus 297 lKL~DFGlA~~~~~~~~-~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~ 374 (665)
+||+|||++........ .......+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||...+..+.+..+..
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~ 240 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ 240 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhC
Confidence 99999999976543221 11223456888999999876 568999999999999999998 9999988776665544322
Q ss_pred hcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 375 LCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 375 ~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.. . ......++..+.+||.+||..||.+|||+.++++
T Consensus 241 ~~--~--------------------------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 241 GR--V--------------------------LERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred CC--C--------------------------CCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 10 0 0011246788999999999999999999999976
No 327
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=4.9e-37 Score=312.31 Aligned_cols=249 Identities=29% Similarity=0.425 Sum_probs=202.2
Q ss_pred eeEEEEeeccCceEEEEEEECCCC----cEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEE
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETG----KIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g----~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~l 235 (665)
+++.+.||.|+||.||++++..++ ..||+|.++.... ......+..|+.+++.++|+||+++++++.... ..|+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD-EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEE-PLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC-hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC-eeEE
Confidence 456789999999999999998776 8999999975543 235667889999999999999999999988754 7899
Q ss_pred EEEeccccchhhhc-CCCCC-CChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC
Q 006004 236 VFEYMEHDLAGLAT-TPGIK-FTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 236 V~Ey~~g~ll~~~~-~~~~~-lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~ 313 (665)
+|||+.++.+..+. ..... +++.++..++.||+.||.|||+.||+|+||||+|||++.++.++|+|||++........
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY 158 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence 99999875554443 33323 99999999999999999999999999999999999999999999999999987654322
Q ss_pred CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc
Q 006004 314 LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA 392 (665)
Q Consensus 314 ~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~ 392 (665)
.......+++.|+|||.+.+ ..++.++|+|||||++|+|++ |++||...+..+.+..+.....
T Consensus 159 ~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~--------------- 222 (258)
T smart00219 159 YKKKGGKLPIRWMAPESLKD-GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYR--------------- 222 (258)
T ss_pred cccccCCCcccccChHHhcc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC---------------
Confidence 11112236789999998864 678999999999999999998 8899988776666655533110
Q ss_pred cCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 393 TSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 393 ~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
......++..+.++|.+||..||.+|||+.++++
T Consensus 223 -------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 223 -------------LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred -------------CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 0011237889999999999999999999999986
No 328
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=5.6e-37 Score=318.71 Aligned_cols=264 Identities=25% Similarity=0.346 Sum_probs=196.8
Q ss_pred Ce-eEEEEeeccCceEEEEEE----ECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-CCc
Q 006004 159 AF-EKIDKIGQGTYSSVYKAR----DLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-SGS 232 (665)
Q Consensus 159 ~y-~~~~~LG~G~fg~Vy~a~----~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-~~~ 232 (665)
+| ++++.||+|+||+||++. ...++..||+|.++... .......+.+|+++|+.++||||+++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKG 82 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCce
Confidence 45 999999999999998865 34578899999987543 233455678999999999999999999987654 345
Q ss_pred EEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC
Q 006004 233 LYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~ 312 (665)
+|+||||+.++.+..+.... .+++.+++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++..+....
T Consensus 83 ~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 161 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 161 (283)
T ss_pred EEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcc
Confidence 89999999987665554433 59999999999999999999999999999999999999999999999999998764332
Q ss_pred CC--CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHh-cCCCChhHHhhhcc
Q 006004 313 NL--PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKL-CGSPSEDYWRKSKS 389 (665)
Q Consensus 313 ~~--~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~-~g~p~~~~~~~~~~ 389 (665)
.. ......++..|+|||.+.+ ..++.++|||||||++|+|++|..||...... +..+... .+......+...
T Consensus 162 ~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~-- 236 (283)
T cd05080 162 EYYRVREDGDSPVFWYAVECLKE-NKFSYASDVWSFGVTLYELLTHCDSKQSPPKK--FEEMIGPKQGQMTVVRLIEL-- 236 (283)
T ss_pred hhhccCCCCCCCceeeCHhHhcc-cCCCcccccHHHHHHHHHHHhCCCCCCCCcch--hhhhhcccccccchhhhhhh--
Confidence 21 0122245677999998876 56899999999999999999999998654321 1111110 000000000000
Q ss_pred ccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 390 AHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 390 ~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
..... .......++..+.+||.+||..||.+|||+.++++
T Consensus 237 -~~~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 237 -LERGM---------RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred -hhcCC---------CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 00000 00112357889999999999999999999999985
No 329
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3.2e-37 Score=338.96 Aligned_cols=253 Identities=24% Similarity=0.340 Sum_probs=197.5
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCC-----CcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCC-CCCcceeeeeeeccC
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLET-----GKIVALKKVRFANMDPESVRFMAREIHILRKLD-HPNVMKLEGLVTSRS 230 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~-----g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~ 230 (665)
.++|++.+.||+|+||.||+|++... +..||||+++... .....+.+.+|+.+|++|. |||||++++++....
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 35799999999999999999987543 3479999987543 3344567889999999996 999999999987654
Q ss_pred CcEEEEEEeccccchh-hhcCC----------------------------------------------------------
Q 006004 231 GSLYLVFEYMEHDLAG-LATTP---------------------------------------------------------- 251 (665)
Q Consensus 231 ~~l~lV~Ey~~g~ll~-~~~~~---------------------------------------------------------- 251 (665)
.+|||||||.++.+. .+...
T Consensus 115 -~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 115 -PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred -ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 799999999865433 22211
Q ss_pred -------------------------------------CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCC
Q 006004 252 -------------------------------------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNA 294 (665)
Q Consensus 252 -------------------------------------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~ 294 (665)
...+++.++..++.||+.||.|||+.||+||||||+|||++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~ 273 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQG 273 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCC
Confidence 1247888899999999999999999999999999999999999
Q ss_pred CcEEEEecccceecCCCCC-CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 006004 295 GVLKIGDFGLATTYDPSQN-LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKI 372 (665)
Q Consensus 295 g~lKL~DFGlA~~~~~~~~-~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI 372 (665)
+.+||+|||++..+..... .......+++.|+|||++.+ ..++.++|||||||++|+|++ |..||......+.+...
T Consensus 274 ~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~ 352 (400)
T cd05105 274 KIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFD-NLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNK 352 (400)
T ss_pred CEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHH
Confidence 9999999999987643221 11223356788999999876 568999999999999999997 99999876543333222
Q ss_pred HHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 373 FKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 373 ~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.... ... .....++..+.+||.+||..||++|||+.++.+
T Consensus 353 ~~~~------------------~~~---------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 353 IKSG------------------YRM---------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HhcC------------------CCC---------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 2210 000 011357889999999999999999999988875
No 330
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=3.2e-37 Score=315.95 Aligned_cols=253 Identities=28% Similarity=0.465 Sum_probs=203.7
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCC---CCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFAN---MDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~---~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~l 235 (665)
+|.+.+.||+|+||.||++++..++..+++|+++... ........+.+|+.+++.++||||+++++++.... ..++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERD-AFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCC-ceEE
Confidence 4899999999999999999998887777777765422 22233445678999999999999999999987765 6899
Q ss_pred EEEeccccchhhhc----CCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 236 VFEYMEHDLAGLAT----TPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 236 V~Ey~~g~ll~~~~----~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
||||+.+..+..+. .....+++.+++.++.||+.||.|||++|++|+||||+||+++. +.+||+|||++..+...
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~ 158 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS 158 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCC
Confidence 99999975554332 23457999999999999999999999999999999999999975 67999999999876432
Q ss_pred CCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 312 QNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 312 ~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
.. ......+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||.+.+.......+... .++
T Consensus 159 ~~-~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~----------- 223 (260)
T cd08222 159 CD-LATTFTGTPYYMSPEALKH-QGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEG--PTP----------- 223 (260)
T ss_pred cc-cccCCCCCcCccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcC--CCC-----------
Confidence 22 1233467899999998865 56788999999999999999999999877665555544321 000
Q ss_pred ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 392 ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 392 ~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
.....++.++.+||.+||..||++||++.++|+||||
T Consensus 224 ---------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 224 ---------------SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred ---------------CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 0113567899999999999999999999999999997
No 331
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=4.5e-37 Score=319.60 Aligned_cols=250 Identities=25% Similarity=0.352 Sum_probs=200.2
Q ss_pred CCeeEEEEeeccCceEEEEEEEC-----CCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCc
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDL-----ETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGS 232 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~-----~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~ 232 (665)
.+|.+.++||+|+||.||++... .++..+|+|.+... .......+.+|+++++.++|+||+++++++.... .
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 81 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTEGR-P 81 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC-c
Confidence 46899999999999999999743 35678999987643 3345567889999999999999999999887754 7
Q ss_pred EEEEEEeccccchhhhcCCC---------------CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcE
Q 006004 233 LYLVFEYMEHDLAGLATTPG---------------IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVL 297 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~~~---------------~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~l 297 (665)
.|+||||+.++.+..+.... ..+++..+..++.||+.||.|||++||+|+||||+|||+++++.+
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCE
Confidence 89999999875544333221 248899999999999999999999999999999999999999999
Q ss_pred EEEecccceecCCCCCC-CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHh
Q 006004 298 KIGDFGLATTYDPSQNL-PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKL 375 (665)
Q Consensus 298 KL~DFGlA~~~~~~~~~-~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~ 375 (665)
||+|||++......... ......+++.|+|||++.+ ..++.++|||||||++|+|++ |.+||...+..+.+..+...
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 240 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY-RKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQG 240 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcC
Confidence 99999999865432211 1122345788999999876 568999999999999999998 99999887776665554321
Q ss_pred cCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 376 CGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 376 ~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
. + ......+++.+.+||.+||..||.+||++.+++.
T Consensus 241 ~--~--------------------------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 241 R--E--------------------------LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred c--c--------------------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 0 0 0111357888999999999999999999999975
No 332
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=3.5e-37 Score=322.79 Aligned_cols=258 Identities=21% Similarity=0.295 Sum_probs=200.1
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCC--------------cEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceee
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETG--------------KIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLE 223 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g--------------~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~ 223 (665)
++|++.+.||+|+||.||+|++..++ ..||+|+++... .......+.+|++++++++||||++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV-TKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 47999999999999999999875432 358999987542 344556788999999999999999999
Q ss_pred eeeeccCCcEEEEEEeccccchhhhcCCC------------CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEE
Q 006004 224 GLVTSRSGSLYLVFEYMEHDLAGLATTPG------------IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLI 291 (665)
Q Consensus 224 ~~~~~~~~~l~lV~Ey~~g~ll~~~~~~~------------~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILl 291 (665)
+++.... .+|+||||+.+..+..+.... ..+++.++..++.||+.||.|||++|++|+||||+|||+
T Consensus 84 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill 162 (295)
T cd05097 84 GVCVSDD-PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV 162 (295)
T ss_pred EEEcCCC-ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEE
Confidence 9987754 789999999875444333211 236888999999999999999999999999999999999
Q ss_pred cCCCcEEEEecccceecCCCCC-CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh--CCCCCCCCChHHH
Q 006004 292 NNAGVLKIGDFGLATTYDPSQN-LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA--GKPIMPGRTEVEQ 368 (665)
Q Consensus 292 d~~g~lKL~DFGlA~~~~~~~~-~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt--G~~pF~g~~~~e~ 368 (665)
+.++.+||+|||++..+..... .......+++.|+|||++.+ ..++.++|+|||||++|+|++ +..||...+..+.
T Consensus 163 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~ 241 (295)
T cd05097 163 GNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQV 241 (295)
T ss_pred cCCCcEEecccccccccccCcceeccCcCcCceeecChhhhcc-CCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHH
Confidence 9999999999999986533221 11223345778999998876 568999999999999999988 6688888776665
Q ss_pred HHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 369 MHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 369 l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
+..+.... .... ... .......+++.+.+||.+||..||.+|||+.++++
T Consensus 242 ~~~~~~~~--------~~~~---~~~----------~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 242 IENTGEFF--------RNQG---RQI----------YLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHhh--------hhcc---ccc----------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 55543311 1000 000 00112346889999999999999999999999975
No 333
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=8.2e-37 Score=310.75 Aligned_cols=245 Identities=25% Similarity=0.390 Sum_probs=196.1
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEecccc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEHD 243 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g~ 243 (665)
+.||+|+||.||++.. .++..||+|+++... .......+.+|+++++.++||||+++++++.... ..++||||+.++
T Consensus 1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~~~ 77 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDL-PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQ-PIYIVMELVPGG 77 (250)
T ss_pred CccCCCCCceEEEEEe-cCCcEEEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCC-ccEEEEECCCCC
Confidence 3689999999999986 468899999886543 3344456889999999999999999999987755 789999999865
Q ss_pred ch-hhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccccccc
Q 006004 244 LA-GLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVVT 322 (665)
Q Consensus 244 ll-~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~gT 322 (665)
.+ ..+......+++..+..++.||+.||.|||++|++|+||||+||+++.++.+||+|||++...............++
T Consensus 78 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05085 78 DFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIP 157 (250)
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCc
Confidence 44 44444445689999999999999999999999999999999999999999999999999976543222111222346
Q ss_pred ccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcc
Q 006004 323 LWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPY 401 (665)
Q Consensus 323 ~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~ 401 (665)
..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+.......+.... ..
T Consensus 158 ~~y~aPE~~~~-~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~-------------------~~---- 213 (250)
T cd05085 158 IKWTAPEALNY-GRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY-------------------RM---- 213 (250)
T ss_pred ccccCHHHhcc-CCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC-------------------CC----
Confidence 77999999875 568899999999999999998 999998877665554442210 00
Q ss_pred hhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 402 KRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 402 ~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
.....++..+.+||.+||..||++||++.++++.
T Consensus 214 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 214 -----SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred -----CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 1113578899999999999999999999999863
No 334
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=5.2e-37 Score=317.00 Aligned_cols=253 Identities=21% Similarity=0.375 Sum_probs=201.3
Q ss_pred CCeeEEEEeeccCceEEEEEEECC-----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCc
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLE-----TGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGS 232 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~-----~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~ 232 (665)
++|++++.||+|+||.||+|+.+. +.+.||+|.+.... .......+.+|+.++++++|+||+++++++.... .
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~ 82 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE-P 82 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC-c
Confidence 479999999999999999999754 34679999876432 2335567889999999999999999999887654 7
Q ss_pred EEEEEEeccccchhhhcCCCC---------CCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecc
Q 006004 233 LYLVFEYMEHDLAGLATTPGI---------KFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFG 303 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~~~~---------~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFG 303 (665)
.|+||||+.++.+..+..... .+++.++..++.||+.||.|||+.||+||||||+|||++.++.++|+|||
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~ 162 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLS 162 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccc
Confidence 899999999655544333222 68999999999999999999999999999999999999999999999999
Q ss_pred cceecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChh
Q 006004 304 LATTYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSED 382 (665)
Q Consensus 304 lA~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~ 382 (665)
++...............++..|+|||.+.+ ..++.++|||||||++|+|++ |..||.+......+..+... ...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~--~~~-- 237 (275)
T cd05046 163 LSKDVYNSEYYKLRNALIPLRWLAPEAVQE-DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAG--KLE-- 237 (275)
T ss_pred cccccCcccccccCCceeEEeecChhhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcC--CcC--
Confidence 987653332223344466888999998876 457899999999999999998 78899776655544443210 000
Q ss_pred HHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 383 YWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 383 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
| .....++..+.+||.+||..||.+|||+.+++.+
T Consensus 238 -~----------------------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 238 -L----------------------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred -C----------------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 0 0112578899999999999999999999999874
No 335
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.7e-37 Score=323.88 Aligned_cols=252 Identities=23% Similarity=0.367 Sum_probs=198.1
Q ss_pred CCeeEEEEeeccCceEEEEEEECC-------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeecc
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLE-------TGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSR 229 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~-------~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~ 229 (665)
++|.+.+.||+|+||.||++++.. +...||+|.+.... .......+.+|+.+++.+ +||||+++++++...
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 579999999999999999998643 23579999987543 334456688899999999 799999999998876
Q ss_pred CCcEEEEEEecccc-chhhhcCC---------------CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcC
Q 006004 230 SGSLYLVFEYMEHD-LAGLATTP---------------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINN 293 (665)
Q Consensus 230 ~~~l~lV~Ey~~g~-ll~~~~~~---------------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~ 293 (665)
. .+|+||||+.++ |...+... ...+++.++..++.||+.||+|||++|++||||||+|||++.
T Consensus 97 ~-~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~ 175 (307)
T cd05098 97 G-PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 175 (307)
T ss_pred C-ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcC
Confidence 5 789999999864 44444322 124888999999999999999999999999999999999999
Q ss_pred CCcEEEEecccceecCCCCCCC-cccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHH
Q 006004 294 AGVLKIGDFGLATTYDPSQNLP-LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHK 371 (665)
Q Consensus 294 ~g~lKL~DFGlA~~~~~~~~~~-~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~k 371 (665)
++.+||+|||++..+....... .....+++.|+|||++.+ ..++.++|+|||||++|+|++ |.+||.+.+..+....
T Consensus 176 ~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~ 254 (307)
T cd05098 176 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 254 (307)
T ss_pred CCcEEECCCcccccccccchhhccccCCCccceeChHHhcc-CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHH
Confidence 9999999999987654321111 111234578999999876 568999999999999999998 8899987665444433
Q ss_pred HHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 372 IFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 372 I~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
+... .. ......++.++.+||.+||..+|.+|||+.+++.+
T Consensus 255 ~~~~--~~--------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 255 LKEG--HR--------------------------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred HHcC--CC--------------------------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 3210 00 01123578899999999999999999999999864
No 336
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=8e-37 Score=314.90 Aligned_cols=251 Identities=23% Similarity=0.367 Sum_probs=202.3
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCc---EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGK---IVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~---~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~ 234 (665)
.+|++.+.||+|+||.||+|.+..+++ .||||.+... ........+..|+.+++.++||||+++++++.... .++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-~~~ 81 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG-YTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSR-PVM 81 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCC-ceE
Confidence 369999999999999999999887765 5999998643 24455677899999999999999999999987654 789
Q ss_pred EEEEeccccchh-hhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC
Q 006004 235 LVFEYMEHDLAG-LATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 235 lV~Ey~~g~ll~-~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~ 313 (665)
+||||+.++.+. .+......+++.++..++.|++.||.|||++|++|+||||+|||++.++.+||+|||++........
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~ 161 (269)
T cd05065 82 IITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 161 (269)
T ss_pred EEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence 999999976554 4444445789999999999999999999999999999999999999999999999999876543221
Q ss_pred C-Cccccc---ccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhc
Q 006004 314 L-PLTSRV---VTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSK 388 (665)
Q Consensus 314 ~-~~~~~~---gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~ 388 (665)
. ...... .+..|+|||.+.+ ..++.++|||||||++|||++ |..||...+..+....+......
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~---------- 230 (269)
T cd05065 162 DPTYTSSLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRL---------- 230 (269)
T ss_pred ccccccccCCCcceeecCHhHhcc-CcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcC----------
Confidence 1 111111 2457999999875 568999999999999999886 99999887766655554321000
Q ss_pred cccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 389 SAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 389 ~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.....++..+.+||.+||..+|.+||++.+++.
T Consensus 231 ------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 231 ------------------PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred ------------------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 011256788999999999999999999999986
No 337
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-38 Score=320.06 Aligned_cols=262 Identities=24% Similarity=0.430 Sum_probs=216.6
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcE
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSL 233 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l 233 (665)
...+|.+++.||+|+|++|.+++.+.|.+.||+|++++.-. +.+.+.-...|-.+..+- +||.+|-|+.+|+.++ .+
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtes-rl 326 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES-RL 326 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccc-eE
Confidence 45679999999999999999999999999999999987644 345566677888888886 7999999999999987 89
Q ss_pred EEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC
Q 006004 234 YLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 234 ~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~ 313 (665)
++|.||++|+.+....++..+|+|+.++.|-.+|+.||.|||++|||+||||.+|+|||..|++||.|+|+++.--. ..
T Consensus 327 ffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~-~g 405 (593)
T KOG0695|consen 327 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG-PG 405 (593)
T ss_pred EEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCC-CC
Confidence 99999999866655556666899999999999999999999999999999999999999999999999999875322 22
Q ss_pred CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCC--CCCh-----HHHHHHHHHhcCCCChhHHhh
Q 006004 314 LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMP--GRTE-----VEQMHKIFKLCGSPSEDYWRK 386 (665)
Q Consensus 314 ~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~--g~~~-----~e~l~kI~~~~g~p~~~~~~~ 386 (665)
....+++|||.|+|||++.+ ..|+..+|+|+||++++||+.|+.||. |.++ .+.+-+++-
T Consensus 406 d~tstfcgtpnyiapeilrg-eeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvil------------ 472 (593)
T KOG0695|consen 406 DTTSTFCGTPNYIAPEILRG-EEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVIL------------ 472 (593)
T ss_pred cccccccCCCcccchhhhcc-cccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHh------------
Confidence 23567899999999999987 789999999999999999999999995 2222 222222111
Q ss_pred hccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcC------HHHHHhCcCCCCCCC
Q 006004 387 SKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGS------AASALRSEFFKTEPL 448 (665)
Q Consensus 387 ~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT------a~eaL~Hp~f~~~~~ 448 (665)
.....+++.++-.+..+++..|++||.+|.. ..++..|+||+...+
T Consensus 473 ----------------ekqiriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idw 524 (593)
T KOG0695|consen 473 ----------------EKQIRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDW 524 (593)
T ss_pred ----------------hhcccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCH
Confidence 0112234567778889999999999999954 789999999986543
No 338
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=6.6e-37 Score=319.65 Aligned_cols=250 Identities=22% Similarity=0.338 Sum_probs=197.2
Q ss_pred CeeEEEEeeccCceEEEEEEECC-----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLE-----TGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSL 233 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~-----~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l 233 (665)
+|++.+.||+|+||.||+|++.. ....+|+|.+.... .......+.+|+.+++.++||||+++++.+.... ..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA-SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDG-PL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC-CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC-Cc
Confidence 47889999999999999998753 23578888886443 3344567889999999999999999999887654 78
Q ss_pred EEEEEeccccchhhhcC------------------------CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccE
Q 006004 234 YLVFEYMEHDLAGLATT------------------------PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNL 289 (665)
Q Consensus 234 ~lV~Ey~~g~ll~~~~~------------------------~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNI 289 (665)
|+||||+.++.+..+.. ....+++..+..++.||+.||.|||+.||+||||||+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni 158 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV 158 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence 99999999755543321 113588999999999999999999999999999999999
Q ss_pred EEcCCCcEEEEecccceecCCCCCC-CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHH
Q 006004 290 LINNAGVLKIGDFGLATTYDPSQNL-PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVE 367 (665)
Q Consensus 290 Lld~~g~lKL~DFGlA~~~~~~~~~-~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e 367 (665)
|+++++.+||+|||++..+...... ......++..|+|||.+.+ ..++.++|||||||++|+|++ |..||.+....+
T Consensus 159 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~ 237 (290)
T cd05045 159 LVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER 237 (290)
T ss_pred EEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHcc-CCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 9999999999999999865332211 1122245678999998876 568999999999999999998 999998876554
Q ss_pred HHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 368 QMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 368 ~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
....+.... .. .....++.++.+||.+||+.||.+||++.++++
T Consensus 238 ~~~~~~~~~-------------------~~---------~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 238 LFNLLKTGY-------------------RM---------ERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHHHhCCC-------------------CC---------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 443322110 00 011357789999999999999999999999975
No 339
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.1e-36 Score=314.07 Aligned_cols=251 Identities=22% Similarity=0.359 Sum_probs=201.4
Q ss_pred CCeeEEEEeeccCceEEEEEEECCC---CcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLET---GKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~---g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~ 234 (665)
++|.+.+.||+|+||.||+|.+... ...||||.+.... .....+.+.+|+.+++.++||||+++++++.+. ..|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~ 82 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN--PVW 82 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC--CcE
Confidence 4699999999999999999997654 3468999886433 344566788999999999999999999988753 578
Q ss_pred EEEEecccc-chhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC
Q 006004 235 LVFEYMEHD-LAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 235 lV~Ey~~g~-ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~ 313 (665)
+||||+.++ +...+......+++.++..++.||+.||.|||+.|++|+||||+|||++.++.+||+|||++........
T Consensus 83 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 162 (270)
T cd05056 83 IVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY 162 (270)
T ss_pred EEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccc
Confidence 999999865 4444444444689999999999999999999999999999999999999999999999999987644322
Q ss_pred CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc
Q 006004 314 LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA 392 (665)
Q Consensus 314 ~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~ 392 (665)
...+...++..|+|||.+.. ..++.++|||||||++|+|++ |..||.+.+..+.+..+......
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~-------------- 227 (270)
T cd05056 163 YKASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL-------------- 227 (270)
T ss_pred eecCCCCccccccChhhhcc-CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC--------------
Confidence 11222234568999998875 568999999999999999986 99999988876666554321000
Q ss_pred cCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 393 TSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 393 ~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
.....++..+.+||.+||..+|.+|||+.+++..
T Consensus 228 --------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 228 --------------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred --------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0123578899999999999999999999998863
No 340
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7e-37 Score=321.89 Aligned_cols=253 Identities=23% Similarity=0.364 Sum_probs=201.2
Q ss_pred CCCeeEEEEeeccCceEEEEEEEC-------CCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeec
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDL-------ETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTS 228 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~-------~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~ 228 (665)
.++|++.+.||+|+||.||+|++. .++..||+|.+.... .......+.+|+.+++.+ +||||+++++++..
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc-chHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 357999999999999999999753 234579999886432 344566788999999999 89999999999887
Q ss_pred cCCcEEEEEEeccccchh-hhcCC---------------CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEc
Q 006004 229 RSGSLYLVFEYMEHDLAG-LATTP---------------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLIN 292 (665)
Q Consensus 229 ~~~~l~lV~Ey~~g~ll~-~~~~~---------------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld 292 (665)
.. .+|+||||+.++.+. .+... ...++..++..++.||+.||.|||++||+||||||+|||++
T Consensus 93 ~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~ 171 (304)
T cd05101 93 DG-PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVT 171 (304)
T ss_pred CC-ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEc
Confidence 54 789999999875443 33321 23578889999999999999999999999999999999999
Q ss_pred CCCcEEEEecccceecCCCCCC-CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHH
Q 006004 293 NAGVLKIGDFGLATTYDPSQNL-PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMH 370 (665)
Q Consensus 293 ~~g~lKL~DFGlA~~~~~~~~~-~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~ 370 (665)
.++.+||+|||++..+...... ......+++.|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+...
T Consensus 172 ~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~ 250 (304)
T cd05101 172 ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 250 (304)
T ss_pred CCCcEEECCCccceecccccccccccCCCCCceeeCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHH
Confidence 9999999999999876432221 1122345678999999876 568999999999999999998 889998877666555
Q ss_pred HHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 371 KIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 371 kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
.+.... . .......+..+.+||.+||..+|.+|||+.++|+.
T Consensus 251 ~~~~~~--~--------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 251 LLKEGH--R--------------------------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHcCC--c--------------------------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 442210 0 00113578899999999999999999999999874
No 341
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.3e-36 Score=312.04 Aligned_cols=247 Identities=23% Similarity=0.408 Sum_probs=199.7
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++.+.||+|+||.||++.+. .+..+|+|.+.... .....+.+|+++++.++|+||+++++++.. ...|++|
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~v~ 79 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVTK--EPIYIIT 79 (260)
T ss_pred cceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh---hHHHHHHHHHHHHHhcCCCCcceEEEEEcC--CCeEEEE
Confidence 57999999999999999999864 45669999886432 335567889999999999999999998876 4689999
Q ss_pred Eeccc-cchhhhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 238 EYMEH-DLAGLATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 238 Ey~~g-~ll~~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||+.+ ++...+.. .+..+++.++..++.||+.||.|||+.|++|+||||+||+++.++.+||+|||++..+.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~ 159 (260)
T cd05073 80 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA 159 (260)
T ss_pred EeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCccc
Confidence 99986 45555443 34468889999999999999999999999999999999999999999999999998764332222
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATS 394 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~ 394 (665)
.....++..|+|||++.. ..++.++|+|||||++|+|++ |++||.+.+..+....+.....
T Consensus 160 ~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~----------------- 221 (260)
T cd05073 160 REGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR----------------- 221 (260)
T ss_pred ccCCcccccccCHhHhcc-CCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCC-----------------
Confidence 223345678999999876 568999999999999999998 9999998776665554422100
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
......++..+.+||.+||..||++||++.+++.
T Consensus 222 -----------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 222 -----------MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred -----------CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 0111357889999999999999999999998874
No 342
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=8e-37 Score=311.04 Aligned_cols=244 Identities=26% Similarity=0.394 Sum_probs=196.2
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEecccc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEHD 243 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g~ 243 (665)
++||+|+||.||++.+.. ++.||+|++...... .....+.+|++++++++|+||+++++++.... ..|+||||+.++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQ-PIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC-CeEEEEEcCCCC
Confidence 369999999999999877 999999998765433 45567889999999999999999999988755 789999999865
Q ss_pred ch-hhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc-ccccc
Q 006004 244 LA-GLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL-TSRVV 321 (665)
Q Consensus 244 ll-~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~-~~~~g 321 (665)
.+ ..+......+++..+..++.|++.||.|||++|++||||||+|||++.++.+||+|||++........... .....
T Consensus 78 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (251)
T cd05041 78 SLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI 157 (251)
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcc
Confidence 44 44444445789999999999999999999999999999999999999999999999999986542211111 12233
Q ss_pred cccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCc
Q 006004 322 TLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQP 400 (665)
Q Consensus 322 T~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p 400 (665)
+..|+|||.+.+ ..++.++|+|||||++|+|++ |..||.+.+.......+......
T Consensus 158 ~~~y~~PE~~~~-~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~---------------------- 214 (251)
T cd05041 158 PIKWTAPEALNY-GRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRM---------------------- 214 (251)
T ss_pred eeccCChHhhcc-CCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCC----------------------
Confidence 567999999876 568999999999999999999 88999887755444443221000
Q ss_pred chhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 401 YKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 401 ~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.....++..+.+||.+||..+|.+|||+.++|+
T Consensus 215 ------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 215 ------PAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred ------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 011356789999999999999999999999986
No 343
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.5e-37 Score=322.86 Aligned_cols=251 Identities=22% Similarity=0.357 Sum_probs=198.8
Q ss_pred CCeeEEEEeeccCceEEEEEEECC-------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeecc
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLE-------TGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSR 229 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~-------~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~ 229 (665)
++|.+.+.||+|+||.||+|++.. ....||+|.++... .......+.+|+.+++++ +||||+++++++...
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 479999999999999999998642 34579999887433 344566788999999999 699999999988765
Q ss_pred CCcEEEEEEeccccchhhhc-CC---------------CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcC
Q 006004 230 SGSLYLVFEYMEHDLAGLAT-TP---------------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINN 293 (665)
Q Consensus 230 ~~~l~lV~Ey~~g~ll~~~~-~~---------------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~ 293 (665)
. .+|+||||+.++.+..+. .. ...+++.++..++.||+.||.|||++||+||||||+|||++.
T Consensus 91 ~-~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~ 169 (314)
T cd05099 91 G-PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTE 169 (314)
T ss_pred C-ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcC
Confidence 4 789999999875444333 21 235889999999999999999999999999999999999999
Q ss_pred CCcEEEEecccceecCCCCCC-CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHH
Q 006004 294 AGVLKIGDFGLATTYDPSQNL-PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHK 371 (665)
Q Consensus 294 ~g~lKL~DFGlA~~~~~~~~~-~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~k 371 (665)
++.+||+|||+++........ ......++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+....
T Consensus 170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~ 248 (314)
T cd05099 170 DNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFD-RVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKL 248 (314)
T ss_pred CCcEEEccccccccccccccccccccCCCCccccCHHHHcc-CCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 999999999999876432211 1111234567999999876 578999999999999999999 8999988776665554
Q ss_pred HHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 372 IFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 372 I~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
+.... . ......++.++.+||.+||..||.+|||+.++++
T Consensus 249 ~~~~~--~--------------------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 249 LREGH--R--------------------------MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHcCC--C--------------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 43210 0 0111356788999999999999999999999886
No 344
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=8.6e-37 Score=316.51 Aligned_cols=253 Identities=21% Similarity=0.289 Sum_probs=201.7
Q ss_pred CCCeeEEEEeeccCceEEEEEEECC----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCc
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLE----TGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGS 232 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~----~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~ 232 (665)
.++|++.+.||+|+||.||+|.+.. ++..||+|++... ........+.+|+.+++.++||||+++++++......
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH-ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 3579999999999999999999876 3578999987633 3455567788999999999999999999987765557
Q ss_pred EEEEEEeccccchhhhc-CCC-------CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEeccc
Q 006004 233 LYLVFEYMEHDLAGLAT-TPG-------IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGL 304 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~-~~~-------~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGl 304 (665)
.++++||+.++.+..+. ... ..+++.++..++.||+.||.|||+++++|+||||+|||++.++.+||+|||+
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~ 163 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNAL 163 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCC
Confidence 89999999865444333 211 4589999999999999999999999999999999999999999999999999
Q ss_pred ceecCCCCCC-CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChh
Q 006004 305 ATTYDPSQNL-PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSED 382 (665)
Q Consensus 305 A~~~~~~~~~-~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~ 382 (665)
++.+...... ......++..|+|||++.+ ..++.++|||||||++|+|++ |++||...+..+....+....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~------ 236 (280)
T cd05043 164 SRDLFPMDYHCLGDNENRPVKWMALESLVN-KEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY------ 236 (280)
T ss_pred cccccCCceEEeCCCCCcchhccCHHHHhc-CCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC------
Confidence 9865433211 1122345678999999876 568999999999999999998 999998876655443332210
Q ss_pred HHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 383 YWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 383 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.. .....+++.+.++|.+||..||++|||+.++++
T Consensus 237 -------------~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 237 -------------RL---------AQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred -------------CC---------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 00 001246788999999999999999999999985
No 345
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=7.2e-37 Score=318.70 Aligned_cols=251 Identities=25% Similarity=0.397 Sum_probs=200.0
Q ss_pred CCeeEEEEeeccCceEEEEEEEC-----CCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCc
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDL-----ETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGS 232 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~-----~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~ 232 (665)
++|++++.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.++++++||||+++++++.... .
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~-~ 82 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDHPNIVKLLGVCAVGK-P 82 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc-CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC-c
Confidence 57999999999999999999974 367889999987433 3444566889999999999999999999888754 7
Q ss_pred EEEEEEeccccch-hhhcCC---------------------CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEE
Q 006004 233 LYLVFEYMEHDLA-GLATTP---------------------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLL 290 (665)
Q Consensus 233 l~lV~Ey~~g~ll-~~~~~~---------------------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNIL 290 (665)
+|+||||+.++.+ ..+... ...+++.++..++.||+.||.|||++|++||||||+|||
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil 162 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCL 162 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheE
Confidence 8999999997544 333211 124788899999999999999999999999999999999
Q ss_pred EcCCCcEEEEecccceecCCCCC-CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHH
Q 006004 291 INNAGVLKIGDFGLATTYDPSQN-LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQ 368 (665)
Q Consensus 291 ld~~g~lKL~DFGlA~~~~~~~~-~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~ 368 (665)
++.++.+||+|||++..+..... ........+..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+.
T Consensus 163 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~ 241 (288)
T cd05050 163 VGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEV 241 (288)
T ss_pred ecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhc-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999999876532211 11122234677999998876 568999999999999999997 8889988776665
Q ss_pred HHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 369 MHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 369 l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
+..+..... ......++..+.+||.+||..||.+|||+.|+++
T Consensus 242 ~~~~~~~~~----------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 242 IYYVRDGNV----------------------------LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHhcCCC----------------------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 554432100 0011256788999999999999999999999875
No 346
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.1e-36 Score=311.18 Aligned_cols=243 Identities=24% Similarity=0.402 Sum_probs=198.3
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++.+.||.|+||.||+|.+ .|+.||+|.+..... ..+.+.+|+.+++.++|+||+++++++... ...|+||
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~v~ 79 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQG-NPLYIVT 79 (256)
T ss_pred hhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCC-CCeEEEE
Confidence 4799999999999999999987 478999999975432 456688999999999999999999998874 4789999
Q ss_pred Eeccccch-hhhcCCC-CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 238 EYMEHDLA-GLATTPG-IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 238 Ey~~g~ll-~~~~~~~-~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||+.+..+ ..+.... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.+||+|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~--- 156 (256)
T cd05039 80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ--- 156 (256)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccccc---
Confidence 99996444 4443322 268999999999999999999999999999999999999999999999999998763222
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATS 394 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~ 394 (665)
.....+..|+|||.+.+ ..++.++|+|||||++|+|++ |..||...+..+....+...
T Consensus 157 -~~~~~~~~~~ape~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~------------------- 215 (256)
T cd05039 157 -DSGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG------------------- 215 (256)
T ss_pred -ccCCCcccccCchhhcC-CcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC-------------------
Confidence 12234667999999875 568899999999999999997 99999877655544433210
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
+.. .....+++.+.+||.+||..+|++|||+.+++.
T Consensus 216 ~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 216 YRM---------EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred CCC---------CCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 000 111356889999999999999999999999986
No 347
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=8.6e-37 Score=311.86 Aligned_cols=245 Identities=25% Similarity=0.367 Sum_probs=199.0
Q ss_pred EEeeccCceEEEEEEECC-CCc--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEec
Q 006004 164 DKIGQGTYSSVYKARDLE-TGK--IVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYM 240 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~-~g~--~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~ 240 (665)
+.||+|+||.||+|.+.. .++ .||||.++..... ...+.+.+|+.++++++||||+++++++.. ..+++||||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT--HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC--CeEEEEEEec
Confidence 368999999999999865 333 6999999866543 566778999999999999999999999887 4789999999
Q ss_pred ccc-chhhhcCCC-CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC--Cc
Q 006004 241 EHD-LAGLATTPG-IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL--PL 316 (665)
Q Consensus 241 ~g~-ll~~~~~~~-~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~--~~ 316 (665)
.++ +...+.... ..+++..++.++.||+.||.|||++|++|+||||+|||++.++.+||+|||++..+...... ..
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 157 (257)
T cd05040 78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVME 157 (257)
T ss_pred CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecc
Confidence 864 444444433 46899999999999999999999999999999999999999999999999999876442211 11
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
....++..|+|||.+.+ ..++.++|||||||++|+|++ |+.||...+..+.+..+...... +
T Consensus 158 ~~~~~~~~y~~pE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~-----~----------- 220 (257)
T cd05040 158 EHLKVPFAWCAPESLRT-RTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGER-----L----------- 220 (257)
T ss_pred cCCCCCceecCHHHhcc-cCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCc-----C-----------
Confidence 23456788999998875 568999999999999999998 99999888777766665431000 0
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.....++..+.+||.+||..+|.+|||+.++++
T Consensus 221 -----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 221 -----------ERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred -----------CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 011246788999999999999999999999985
No 348
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.2e-36 Score=312.73 Aligned_cols=243 Identities=24% Similarity=0.316 Sum_probs=194.1
Q ss_pred EeeccCceEEEEEEEC--CCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEeccc
Q 006004 165 KIGQGTYSSVYKARDL--ETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEH 242 (665)
Q Consensus 165 ~LG~G~fg~Vy~a~~~--~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g 242 (665)
.||+|+||.||+|++. .++..||+|++.... .....+.+.+|+.++++++||||+++++++.. ..+++||||+.+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~--~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA--EALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC--CCeEEEEEeCCC
Confidence 4899999999999765 445679999986543 34445678899999999999999999998754 368999999987
Q ss_pred cchh-hhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC--cccc
Q 006004 243 DLAG-LATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP--LTSR 319 (665)
Q Consensus 243 ~ll~-~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~--~~~~ 319 (665)
+.+. .+......+++.++..++.||+.||.|||++|++|+||||+|||++.++.+||+|||++..+....... ....
T Consensus 79 ~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05115 79 GPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG 158 (257)
T ss_pred CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence 5554 443345579999999999999999999999999999999999999999999999999998664332211 1112
Q ss_pred cccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCC
Q 006004 320 VVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQ 398 (665)
Q Consensus 320 ~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~ 398 (665)
.+++.|+|||++.+ ..++.++|||||||++|+|++ |..||.+....+.+..+.... .
T Consensus 159 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--~------------------- 216 (257)
T cd05115 159 KWPLKWYAPECINF-RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGK--R------------------- 216 (257)
T ss_pred CCCcccCCHHHHcc-CCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC--C-------------------
Confidence 23578999998875 568999999999999999996 999998887766555443210 0
Q ss_pred CcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 399 QPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 399 ~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.......++++.+||.+||..||++||++.++++
T Consensus 217 -------~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 217 -------LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred -------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0111356889999999999999999999999875
No 349
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=8.6e-37 Score=314.69 Aligned_cols=248 Identities=29% Similarity=0.445 Sum_probs=196.2
Q ss_pred eEEEEeeccCceEEEEEEEC----CCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 161 EKIDKIGQGTYSSVYKARDL----ETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 161 ~~~~~LG~G~fg~Vy~a~~~----~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
++.+.||.|.||.||+|... ..+..|+||.++. ....+..+.+.+|++++++++||||+++++++.... .+++|
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~-~~~lv 79 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP-SSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENE-PLFLV 79 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST-TSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSS-SEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc-ccccccceeeeecccccccccccccccccccccccc-ccccc
Confidence 46789999999999999987 3467899999954 334555778899999999999999999999998544 69999
Q ss_pred EEecccc-chhhhcCC-CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC-
Q 006004 237 FEYMEHD-LAGLATTP-GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN- 313 (665)
Q Consensus 237 ~Ey~~g~-ll~~~~~~-~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~- 313 (665)
|||+.++ |...+... ...+++.++..++.||+.||.|||+++|+|+||++.|||++.++.+||+|||++........
T Consensus 80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999865 44445444 46799999999999999999999999999999999999999999999999999988732211
Q ss_pred CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc
Q 006004 314 LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA 392 (665)
Q Consensus 314 ~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~ 392 (665)
...........|+|||.+.. ..++.++||||||+++|||++ |+.||...+..+.+.++....-
T Consensus 160 ~~~~~~~~~~~~~aPE~~~~-~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~--------------- 223 (259)
T PF07714_consen 160 KNDSSQQLPLRYLAPEVLKD-GEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQR--------------- 223 (259)
T ss_dssp EESTTSESGGGGS-HHHHHH-SEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEE---------------
T ss_pred cccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccc---------------
Confidence 11223356788999999876 458999999999999999999 7899998887777777633110
Q ss_pred cCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 393 TSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 393 ~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
......++..+.+||..||..||.+|||+.++++
T Consensus 224 -------------~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 224 -------------LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp -------------TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred -------------ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1112357889999999999999999999999985
No 350
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=8.5e-37 Score=317.85 Aligned_cols=266 Identities=24% Similarity=0.376 Sum_probs=199.1
Q ss_pred CeeEEEEeeccCceEEEEEEE----CCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-CCcE
Q 006004 159 AFEKIDKIGQGTYSSVYKARD----LETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-SGSL 233 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~----~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-~~~l 233 (665)
.|++++.||+|+||.||+|+. ..++..||+|.++... .......+.+|+.+++.+.||||+++++++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 479999999999999999984 4578899999986543 344456789999999999999999999988765 3468
Q ss_pred EEEEEeccccchhhhc-CCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC
Q 006004 234 YLVFEYMEHDLAGLAT-TPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 234 ~lV~Ey~~g~ll~~~~-~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~ 312 (665)
++||||+.|+.+..+. .....+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+....
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~ 163 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 163 (284)
T ss_pred EEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCc
Confidence 9999999876555444 333468999999999999999999999999999999999999999999999999998764332
Q ss_pred CC--CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhH-Hhhhcc
Q 006004 313 NL--PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDY-WRKSKS 389 (665)
Q Consensus 313 ~~--~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~-~~~~~~ 389 (665)
.. ......++..|+|||++.+ ..++.++|||||||++|+|+++..|+..... . +.+..+....+. +.....
T Consensus 164 ~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~ellt~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 164 EYYTVKDDLDSPVFWYAPECLIQ-SKFYIASDVWSFGVTLYELLTYCDSESSPMT--L---FLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred cceeecCCCCCCccccCHHHhcc-CCCCccccchhhhhhhhhhhcCCCCCccccc--h---hhhhcccccccccHHHHHH
Confidence 21 1123456778999999876 5688999999999999999998866533211 1 111111111110 000000
Q ss_pred ccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 390 AHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 390 ~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
..... ........++..+.+||.+||+.||.+|||+.+++++
T Consensus 238 ~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 238 VLEEG---------KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred HHHcC---------ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 00000 0011123578999999999999999999999999874
No 351
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.3e-36 Score=311.33 Aligned_cols=247 Identities=23% Similarity=0.343 Sum_probs=192.0
Q ss_pred EEeeccCceEEEEEEECC---CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEec
Q 006004 164 DKIGQGTYSSVYKARDLE---TGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYM 240 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~---~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~ 240 (665)
+.||+|+||.||+|.+.. +...||||.+... ........+.+|+.+++.++||||+++++++...++..|+||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI-TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc-CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecC
Confidence 368999999999998654 3457999987532 234456678899999999999999999997765555789999999
Q ss_pred cccch-hhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC---CCc
Q 006004 241 EHDLA-GLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN---LPL 316 (665)
Q Consensus 241 ~g~ll-~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~---~~~ 316 (665)
.++.+ ..+......+++..+..++.||+.||.|||+.+|+||||||+|||++.++.+||+|||++..+..... ...
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 159 (262)
T cd05058 80 KHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH 159 (262)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence 86544 44444344577888899999999999999999999999999999999999999999999986533211 111
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
....++..|+|||.+.+ ..++.++|||||||++|||++ |.+||...+..+....+... .+
T Consensus 160 ~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~--~~---------------- 220 (262)
T cd05058 160 TGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQG--RR---------------- 220 (262)
T ss_pred ccCcCCccccChhHhcc-CccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC--CC----------------
Confidence 22345778999998876 568999999999999999999 56788877665544443221 00
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
+ .....+++.+.+||.+||..||++||++.+++..
T Consensus 221 -~---------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 221 -L---------LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred -C---------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 0 0012467889999999999999999999999863
No 352
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3.2e-36 Score=312.86 Aligned_cols=267 Identities=26% Similarity=0.375 Sum_probs=196.4
Q ss_pred CCeeEEEEeeccCceEEEEEE----ECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-CCc
Q 006004 158 DAFEKIDKIGQGTYSSVYKAR----DLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-SGS 232 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~----~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-~~~ 232 (665)
.+|++++.||+|+||.||++. +..++..||+|.+... .....+.+.+|+++|+.++||||+++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 81 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence 479999999999999999998 4567889999998643 344566788999999999999999999976543 346
Q ss_pred EEEEEEeccccch-hhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 233 LYLVFEYMEHDLA-GLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 233 l~lV~Ey~~g~ll-~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
+|+||||+.++.+ ..+......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+...
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 161 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQD 161 (284)
T ss_pred eEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCC
Confidence 8999999986544 444444456899999999999999999999999999999999999999999999999999876433
Q ss_pred CCCC--cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcc
Q 006004 312 QNLP--LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKS 389 (665)
Q Consensus 312 ~~~~--~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~ 389 (665)
.... .....++..|+|||++.+ ..++.++|||||||++|||++|..++..... .....+.... ...........
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~ 237 (284)
T cd05081 162 KEYYKVREPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYSDKSCSPPA-EFMRMMGNDK--QGQMIVYHLIE 237 (284)
T ss_pred CcceeecCCCCCceEeeCHHHhcc-CCcChHHHHHHHHHHHHHHhhcCCcCCCcch-hhhhhccccc--ccccchHHHHH
Confidence 2211 111123456999999876 5689999999999999999999876644321 1111110000 00000000000
Q ss_pred ccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 390 AHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 390 ~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
...... .......++..+.+||.+||..||++|||+.++++
T Consensus 238 ~~~~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 238 LLKNNG---------RLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred HHhcCC---------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 000000 00112467889999999999999999999999986
No 353
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.8e-36 Score=323.63 Aligned_cols=252 Identities=22% Similarity=0.355 Sum_probs=199.1
Q ss_pred CCeeEEEEeeccCceEEEEEEECCC-------CcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeecc
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLET-------GKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSR 229 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~-------g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~ 229 (665)
.+|++.+.||+|+||.||+|++... +..||+|.++.. ......+.+.+|+.+++++ +||||+++++++...
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 3699999999999999999986432 236899987643 2344567788999999999 899999999998765
Q ss_pred CCcEEEEEEeccccchh-hhcCC---------------CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcC
Q 006004 230 SGSLYLVFEYMEHDLAG-LATTP---------------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINN 293 (665)
Q Consensus 230 ~~~l~lV~Ey~~g~ll~-~~~~~---------------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~ 293 (665)
. .+|++|||+.++.+. .+... ...++..++..++.||+.||.|||.+||+||||||+|||++.
T Consensus 91 ~-~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~ 169 (334)
T cd05100 91 G-PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTE 169 (334)
T ss_pred C-ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC
Confidence 4 789999999875444 33221 224778889999999999999999999999999999999999
Q ss_pred CCcEEEEecccceecCCCCCC-CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHH
Q 006004 294 AGVLKIGDFGLATTYDPSQNL-PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHK 371 (665)
Q Consensus 294 ~g~lKL~DFGlA~~~~~~~~~-~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~k 371 (665)
++.+||+|||+++........ ......++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..+....
T Consensus 170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~ 248 (334)
T cd05100 170 DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKL 248 (334)
T ss_pred CCcEEECCcccceecccccccccccCCCcCceEcCHHHhcc-CCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 999999999999876432211 1122234567999999876 568999999999999999998 8899988876665554
Q ss_pred HHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 372 IFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 372 I~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
+.... . .......+..+.+||.+||..+|.+|||+.++|.+
T Consensus 249 ~~~~~-------------------~---------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 249 LKEGH-------------------R---------MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHcCC-------------------C---------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 42210 0 01112567889999999999999999999999874
No 354
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.5e-36 Score=313.09 Aligned_cols=239 Identities=19% Similarity=0.259 Sum_probs=187.7
Q ss_pred EEeeccCceEEEEEEECCC------------CcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCC
Q 006004 164 DKIGQGTYSSVYKARDLET------------GKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSG 231 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~------------g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ 231 (665)
+.||+|+||.||+++...+ ...+|+|.+.... ......+.+|+.+++.++||||+++++++....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~- 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVRDV- 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-
Confidence 3689999999999985322 2358888875432 233456788999999999999999999987654
Q ss_pred cEEEEEEeccccchhhhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCc-------EEEEecc
Q 006004 232 SLYLVFEYMEHDLAGLATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGV-------LKIGDFG 303 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~-------lKL~DFG 303 (665)
..++||||++++.+..+.. ....+++..+..++.||+.||.|||++||+||||||+||||+.++. +||+|||
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 6799999999876665543 3457999999999999999999999999999999999999987664 8999999
Q ss_pred cceecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHH-hCCCCCCCCChHHHHHHHHHhcCCCChh
Q 006004 304 LATTYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELF-AGKPIMPGRTEVEQMHKIFKLCGSPSED 382 (665)
Q Consensus 304 lA~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLl-tG~~pF~g~~~~e~l~kI~~~~g~p~~~ 382 (665)
++...... ....++..|+|||++.....++.++|||||||++|+|+ +|..||......+.. .+....
T Consensus 158 ~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~~~------ 225 (262)
T cd05077 158 IPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYEGQ------ 225 (262)
T ss_pred CCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHhcC------
Confidence 98765321 23467889999998875567899999999999999997 588888776543322 111100
Q ss_pred HHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 383 YWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 383 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
+ ......++++.+||.+||..||.+||++.++|++
T Consensus 226 ------------~-----------~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 226 ------------C-----------MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred ------------c-----------cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 0 0011345778999999999999999999999975
No 355
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.4e-36 Score=316.64 Aligned_cols=258 Identities=19% Similarity=0.302 Sum_probs=197.6
Q ss_pred CCeeEEEEeeccCceEEEEEEECC----------------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcce
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLE----------------TGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMK 221 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~----------------~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~ 221 (665)
++|++.+.||+|+||.||++.+.. ++..||+|+++... .......+.+|+.+|+.++|+||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcce
Confidence 369999999999999999986532 34579999987542 3444567889999999999999999
Q ss_pred eeeeeeccCCcEEEEEEeccccch-hhhcCC----------CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEE
Q 006004 222 LEGLVTSRSGSLYLVFEYMEHDLA-GLATTP----------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLL 290 (665)
Q Consensus 222 l~~~~~~~~~~l~lV~Ey~~g~ll-~~~~~~----------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNIL 290 (665)
+++++.... .+|+||||+.++.+ ..+... ...+++.++..++.||+.||.|||+.||+|+||||+|||
T Consensus 84 ~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nil 162 (296)
T cd05095 84 LLAVCITSD-PLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCL 162 (296)
T ss_pred EEEEEecCC-ccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEE
Confidence 999987755 78999999986444 333321 124778899999999999999999999999999999999
Q ss_pred EcCCCcEEEEecccceecCCCCCCC-cccccccccccCcccccCCcccCcccchhhhHHHHHHHHh--CCCCCCCCChHH
Q 006004 291 INNAGVLKIGDFGLATTYDPSQNLP-LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA--GKPIMPGRTEVE 367 (665)
Q Consensus 291 ld~~g~lKL~DFGlA~~~~~~~~~~-~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt--G~~pF~g~~~~e 367 (665)
++.++.++|+|||++..+....... .....+++.|+|||++.+ ..++.++|+|||||++|||++ |..||...+..+
T Consensus 163 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 163 VGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILL-GKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred EcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhc-CCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 9999999999999998654322111 122344678999998876 568999999999999999998 778898776655
Q ss_pred HHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 368 QMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 368 ~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.+..... ++.... .... ......+++.+.+||..||..||.+|||+.++++
T Consensus 242 ~~~~~~~--------~~~~~~---~~~~----------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 242 VIENTGE--------FFRDQG---RQVY----------LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHH--------HHhhcc---cccc----------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 5543321 111000 0000 0112346788999999999999999999999875
No 356
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=6.4e-37 Score=314.37 Aligned_cols=239 Identities=19% Similarity=0.252 Sum_probs=188.4
Q ss_pred EEeeccCceEEEEEEECCCCcE-------EEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 164 DKIGQGTYSSVYKARDLETGKI-------VALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~-------vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
+.||+|+||.||+|.+..++.. ||+|.+.... ....+.+..|+.+++.++||||+++++++.... ..++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~-~~~lv 77 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGD-ESIMV 77 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCC-CcEEE
Confidence 3689999999999998765543 8888775322 334556788999999999999999999988754 68999
Q ss_pred EEeccccchhhhc-CCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCc--------EEEEeccccee
Q 006004 237 FEYMEHDLAGLAT-TPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGV--------LKIGDFGLATT 307 (665)
Q Consensus 237 ~Ey~~g~ll~~~~-~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~--------lKL~DFGlA~~ 307 (665)
|||+.++.+..+. ..+..+++..+..++.||+.||.|||++||+||||||+|||++.++. ++|+|||++..
T Consensus 78 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~ 157 (258)
T cd05078 78 QEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT 157 (258)
T ss_pred EecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence 9999976554444 44556899999999999999999999999999999999999987765 69999999876
Q ss_pred cCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCC-CCCCCCChHHHHHHHHHhcCCCChhHHhh
Q 006004 308 YDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGK-PIMPGRTEVEQMHKIFKLCGSPSEDYWRK 386 (665)
Q Consensus 308 ~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~-~pF~g~~~~e~l~kI~~~~g~p~~~~~~~ 386 (665)
.... ....+++.|+|||++.+...++.++|||||||++|+|++|. +||...+........ ...
T Consensus 158 ~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~-~~~---------- 221 (258)
T cd05078 158 VLPK-----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFY-EDR---------- 221 (258)
T ss_pred cCCc-----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHH-Hcc----------
Confidence 5322 23467889999999987566899999999999999999995 666655544332211 100
Q ss_pred hccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 387 SKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 387 ~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
.......+.++.+||.+||+.||++|||+.++++.
T Consensus 222 -------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 222 -------------------HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred -------------------ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 00112345778999999999999999999999874
No 357
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=4.5e-36 Score=311.28 Aligned_cols=250 Identities=24% Similarity=0.353 Sum_probs=201.2
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCc----EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGK----IVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSL 233 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~----~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l 233 (665)
++|++++.||+|+||.||+|.++.+|. .||+|.+.... .......+.+|+.++++++||||+++++++.. ...
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~ 83 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET-SPKANKEILDEAYVMASVDHPHVVRLLGICLS--SQV 83 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--Cce
Confidence 579999999999999999999877765 58999876543 24455678899999999999999999998876 478
Q ss_pred EEEEEecccc-chhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC
Q 006004 234 YLVFEYMEHD-LAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 234 ~lV~Ey~~g~-ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~ 312 (665)
++||||+.++ +...+......+++..+..++.||+.||+|||++||+|+||||+|||++.++.+||+|||++..+....
T Consensus 84 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~ 163 (279)
T cd05057 84 QLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDE 163 (279)
T ss_pred EEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcc
Confidence 9999999864 555555545579999999999999999999999999999999999999999999999999998765332
Q ss_pred CCC-cccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccc
Q 006004 313 NLP-LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSA 390 (665)
Q Consensus 313 ~~~-~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~ 390 (665)
... .....++..|+|||.+.. ..++.++|+|||||++|+|++ |..||.+....+....+... ..
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~--~~----------- 229 (279)
T cd05057 164 KEYHAEGGKVPIKWMALESILH-RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG--ER----------- 229 (279)
T ss_pred cceecCCCcccccccCHHHhhc-CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCC--CC-----------
Confidence 211 111223567999998865 568899999999999999998 99999887765544444321 00
Q ss_pred cccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 391 HATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 391 ~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.......+.++.++|.+||..||.+|||+.++++
T Consensus 230 ---------------~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 230 ---------------LPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred ---------------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0011235678999999999999999999999875
No 358
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.7e-36 Score=311.79 Aligned_cols=242 Identities=28% Similarity=0.404 Sum_probs=190.0
Q ss_pred EeeccCceEEEEEEECCCCcE--EEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcEEEEEEecc
Q 006004 165 KIGQGTYSSVYKARDLETGKI--VALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSLYLVFEYME 241 (665)
Q Consensus 165 ~LG~G~fg~Vy~a~~~~~g~~--vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l~lV~Ey~~ 241 (665)
.||+|+||.||+|++..++.. +|+|.++.. ........+.+|+.+++++ +||||+++++++.... .+|+||||+.
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-~~~lv~e~~~ 79 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG-YLYLAIEYAP 79 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEcccc-CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCC-CceEEEEeCC
Confidence 689999999999999888764 588877632 2344556788999999999 8999999999988754 7899999998
Q ss_pred cc-chhhhcCC---------------CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccc
Q 006004 242 HD-LAGLATTP---------------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLA 305 (665)
Q Consensus 242 g~-ll~~~~~~---------------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA 305 (665)
++ |...+... ...+++.+++.++.||+.||+|||+.||+|+||||+|||++.++.+||+|||++
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~ 159 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 159 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCc
Confidence 64 44443321 124789999999999999999999999999999999999999999999999998
Q ss_pred eecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHH
Q 006004 306 TTYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYW 384 (665)
Q Consensus 306 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~ 384 (665)
........ ......+..|+|||++.. ..++.++|||||||++|+|++ |..||.+.+..+....+...
T Consensus 160 ~~~~~~~~--~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~--------- 227 (270)
T cd05047 160 RGQEVYVK--KTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG--------- 227 (270)
T ss_pred cccchhhh--ccCCCCccccCChHHHcc-CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCC---------
Confidence 64321111 111223567999998865 668999999999999999997 99999887655544443210
Q ss_pred hhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 385 RKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 385 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
... .....++.++.+||.+||..||.+|||+.++++
T Consensus 228 ----------~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 228 ----------YRL---------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred ----------CCC---------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 000 011246788999999999999999999999986
No 359
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2.2e-36 Score=314.22 Aligned_cols=238 Identities=24% Similarity=0.297 Sum_probs=187.0
Q ss_pred EeeccCceEEEEEEECCC------------------------CcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcc
Q 006004 165 KIGQGTYSSVYKARDLET------------------------GKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVM 220 (665)
Q Consensus 165 ~LG~G~fg~Vy~a~~~~~------------------------g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV 220 (665)
.||+|+||.||++....+ ...||+|++.... ......+.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCCCCCee
Confidence 699999999999975322 2358888886432 23345678899999999999999
Q ss_pred eeeeeeeccCCcEEEEEEeccccchhhhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCC----
Q 006004 221 KLEGLVTSRSGSLYLVFEYMEHDLAGLATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAG---- 295 (665)
Q Consensus 221 ~l~~~~~~~~~~l~lV~Ey~~g~ll~~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g---- 295 (665)
++++++.... ..|+||||++++.+..+.. ....+++..+..++.||+.||.|||++||+||||||+|||++..+
T Consensus 80 ~~~~~~~~~~-~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~ 158 (274)
T cd05076 80 FVHGVCVRGS-ENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEG 158 (274)
T ss_pred eEEEEEEeCC-ceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccC
Confidence 9999987754 7899999999877665553 355789999999999999999999999999999999999998654
Q ss_pred ---cEEEEecccceecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHH-HhCCCCCCCCChHHHHHH
Q 006004 296 ---VLKIGDFGLATTYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAEL-FAGKPIMPGRTEVEQMHK 371 (665)
Q Consensus 296 ---~lKL~DFGlA~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeL-ltG~~pF~g~~~~e~l~k 371 (665)
.+||+|||++...... ....++..|+|||.+.+...++.++|||||||++||| ++|++||.+.+..+....
T Consensus 159 ~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~ 233 (274)
T cd05076 159 TSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF 233 (274)
T ss_pred ccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHH
Confidence 4899999998654221 2235788899999987656789999999999999998 579999987665443221
Q ss_pred HHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 372 IFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 372 I~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
+.... ......++.+.+||.+||..||.+|||+.++|++
T Consensus 234 ~~~~~------------------------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 234 YEKKH------------------------------RLPEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HHhcc------------------------------CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 11100 0011245678999999999999999999999975
No 360
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-38 Score=336.68 Aligned_cols=240 Identities=26% Similarity=0.392 Sum_probs=199.8
Q ss_pred eeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEe
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEY 239 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey 239 (665)
..-++-||.|+.|-||+++. .++.||||+++.- -..+|+-|++|+||||+.+.+++... ..+||||||
T Consensus 126 IsELeWlGSGaQGAVF~Grl--~netVAVKKV~el---------kETdIKHLRkLkH~NII~FkGVCtqs-PcyCIiMEf 193 (904)
T KOG4721|consen 126 ISELEWLGSGAQGAVFLGRL--HNETVAVKKVREL---------KETDIKHLRKLKHPNIITFKGVCTQS-PCYCIIMEF 193 (904)
T ss_pred hhhhhhhccCcccceeeeec--cCceehhHHHhhh---------hhhhHHHHHhccCcceeeEeeeecCC-ceeEEeeec
Confidence 45567899999999999986 5678999988621 13588899999999999999998764 478999999
Q ss_pred ccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccc
Q 006004 240 MEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSR 319 (665)
Q Consensus 240 ~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~ 319 (665)
|..+-+..+++.+..++......|..+|+.|+.|||.+.|||||||.-||||..+..|||+|||.++.+... ...-++
T Consensus 194 Ca~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STkMSF 271 (904)
T KOG4721|consen 194 CAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STKMSF 271 (904)
T ss_pred cccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh--hhhhhh
Confidence 998777777777778999999999999999999999999999999999999999999999999999876543 345678
Q ss_pred cccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCC
Q 006004 320 VVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQ 399 (665)
Q Consensus 320 ~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~ 399 (665)
+||..|||||+|.+ .+.+.++|||||||||||||||..||..-+. .+.|+- .|+..-.
T Consensus 272 aGTVaWMAPEvIrn-ePcsEKVDIwSfGVVLWEmLT~EiPYkdVds---sAIIwG-VGsNsL~----------------- 329 (904)
T KOG4721|consen 272 AGTVAWMAPEVIRN-EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS---SAIIWG-VGSNSLH----------------- 329 (904)
T ss_pred hhhHhhhCHHHhhc-CCcccccceehhHHHHHHHHhcCCCccccch---heeEEe-ccCCccc-----------------
Confidence 99999999999987 7899999999999999999999999976543 333322 1221110
Q ss_pred cchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCc
Q 006004 400 PYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSE 441 (665)
Q Consensus 400 p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp 441 (665)
.......|+.++-||+.|+.-.|..||+..++|.|-
T Consensus 330 ------LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 330 ------LPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred ------ccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 011235678899999999999999999999999983
No 361
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=4.6e-36 Score=308.93 Aligned_cols=251 Identities=26% Similarity=0.460 Sum_probs=202.4
Q ss_pred CeeEEEEeeccCceEEEEEEECC-CCcEEEEEEEecCC--------CCHHHHHHHHHHHHHHHh-CCCCCcceeeeeeec
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLE-TGKIVALKKVRFAN--------MDPESVRFMAREIHILRK-LDHPNVMKLEGLVTS 228 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~-~g~~vAiK~i~~~~--------~~~~~~~~~~~Ei~iL~~-L~HpnIV~l~~~~~~ 228 (665)
.|++.+.||+|+||.||++++.. +++.+|+|.+.... ........+.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 38889999999999999999988 67899999886432 123345567789998875 799999999999877
Q ss_pred cCCcEEEEEEeccccchhhh----cCCCCCCChhHHHHHHHHHHHHHHHHHh-CCccccCCCcccEEEcCCCcEEEEecc
Q 006004 229 RSGSLYLVFEYMEHDLAGLA----TTPGIKFTEPQIKCYMQQLLRGLEHCHS-RGILHRDIKGSNLLINNAGVLKIGDFG 303 (665)
Q Consensus 229 ~~~~l~lV~Ey~~g~ll~~~----~~~~~~lse~~i~~i~~QIl~aL~~LH~-~gIiHrDLKPeNILld~~g~lKL~DFG 303 (665)
.. .+|+||||+.+..+..+ ......+++..++.++.||+.||.|||+ .||+|+||+|+|||++.++.+||+|||
T Consensus 81 ~~-~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg 159 (269)
T cd08528 81 ND-RLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFG 159 (269)
T ss_pred CC-eEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEeccc
Confidence 54 89999999987544332 2344579999999999999999999996 789999999999999999999999999
Q ss_pred cceecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhH
Q 006004 304 LATTYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDY 383 (665)
Q Consensus 304 lA~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~ 383 (665)
++....... ......++..|+|||++.+ ..++.++|+|||||++|+|++|++||...+.......+......+
T Consensus 160 ~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---- 232 (269)
T cd08528 160 LAKQKQPES--KLTSVVGTILYSCPEIVKN-EPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEP---- 232 (269)
T ss_pred ceeeccccc--ccccccCcccCcChhhhcC-CCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCc----
Confidence 998765432 3345578999999999986 568999999999999999999999998776655554443311100
Q ss_pred HhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 384 WRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 384 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
.....+++.+.+||.+||..||++||++.|+..+
T Consensus 233 -----------------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 233 -----------------------LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred -----------------------CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 0012467889999999999999999999998764
No 362
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=3e-36 Score=331.33 Aligned_cols=253 Identities=23% Similarity=0.337 Sum_probs=199.0
Q ss_pred CCeeEEEEeeccCceEEEEEEEC-----CCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCC-CCCcceeeeeeeccCC
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDL-----ETGKIVALKKVRFANMDPESVRFMAREIHILRKLD-HPNVMKLEGLVTSRSG 231 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~-----~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~ 231 (665)
++|.+.++||+|+||.||+|++. .+++.||||+++... .....+.+.+|+.+|.++. |||||++++++....
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~- 114 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA-RSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG- 114 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC-ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC-
Confidence 36889999999999999999964 345689999997543 2334456889999999997 999999999988754
Q ss_pred cEEEEEEeccccch-hhhcCC-----------------------------------------------------------
Q 006004 232 SLYLVFEYMEHDLA-GLATTP----------------------------------------------------------- 251 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll-~~~~~~----------------------------------------------------------- 251 (665)
.+||||||+.++.+ ..+...
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 78999999986443 333211
Q ss_pred --------------------------------------CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcC
Q 006004 252 --------------------------------------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINN 293 (665)
Q Consensus 252 --------------------------------------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~ 293 (665)
...+++.++..|+.||+.||.|||+.||+||||||+|||++.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~ 274 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICE 274 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeC
Confidence 123677888999999999999999999999999999999999
Q ss_pred CCcEEEEecccceecCCCCC-CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHH
Q 006004 294 AGVLKIGDFGLATTYDPSQN-LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHK 371 (665)
Q Consensus 294 ~g~lKL~DFGlA~~~~~~~~-~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~k 371 (665)
++.+||+|||++..+..... .......+++.|+|||++.+ ..++.++|||||||++|||++ |..||......+.+..
T Consensus 275 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~ 353 (401)
T cd05107 275 GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFN-NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYN 353 (401)
T ss_pred CCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcC-CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHH
Confidence 99999999999987533221 11223456889999999876 568999999999999999998 8899987665554443
Q ss_pred HHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 372 IFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 372 I~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
.... +. .+ .....++..+.+||.+||..||.+||++.++|+.
T Consensus 354 ~~~~-~~-----------------~~---------~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 354 AIKR-GY-----------------RM---------AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred HHHc-CC-----------------CC---------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 3221 00 00 0123568899999999999999999999999864
No 363
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3.8e-36 Score=309.85 Aligned_cols=250 Identities=21% Similarity=0.321 Sum_probs=189.0
Q ss_pred EEeeccCceEEEEEEECC--CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEecc
Q 006004 164 DKIGQGTYSSVYKARDLE--TGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYME 241 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~--~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~ 241 (665)
+.||+|+||.||+|.... ....+|+|.+.... .......+.+|+.+++.++||||+++++.+.... .+|+||||+.
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~-~~~lv~e~~~ 78 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA-TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESI-PYLLVLEFCP 78 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC-ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCC-ceEEEEEeCC
Confidence 368999999999996533 34578888776433 3344556788999999999999999999887654 7899999998
Q ss_pred ccchhhhc-CCC----CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC-CC
Q 006004 242 HDLAGLAT-TPG----IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN-LP 315 (665)
Q Consensus 242 g~ll~~~~-~~~----~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~-~~ 315 (665)
++.+..+. ... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........ ..
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 75554433 221 2356788899999999999999999999999999999999999999999999875432211 11
Q ss_pred cccccccccccCcccccC------CcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhc
Q 006004 316 LTSRVVTLWYRAPELLLG------ATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSK 388 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~------~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~ 388 (665)
.....+++.|+|||++.. ...++.++|||||||++|+|++ |.+||....+.+.+..+.........
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~------- 231 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLP------- 231 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCC-------
Confidence 123345778999998742 2356889999999999999999 78899888776666655432111000
Q ss_pred cccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 389 SAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 389 ~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.+ .....+++...+++..|+ .||++|||+++++.
T Consensus 232 ----------~~------~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 232 ----------KP------QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred ----------CC------cccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 00 112357788889999988 59999999999986
No 364
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=7.4e-37 Score=310.80 Aligned_cols=229 Identities=26% Similarity=0.346 Sum_probs=183.8
Q ss_pred cCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEeccccchhhh
Q 006004 169 GTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEHDLAGLA 248 (665)
Q Consensus 169 G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g~ll~~~ 248 (665)
|.|+.||+|++..+++.||+|.++... ...+|...+....||||+++++++.... .+|+||||+.++.+..+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSED-SVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecCC-eEEEEEecCCCCCHHHH
Confidence 899999999999999999999997542 1234555556667999999999988754 78999999997655444
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccccccccccCc
Q 006004 249 TTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVVTLWYRAP 328 (665)
Q Consensus 249 ~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~gT~~Y~AP 328 (665)
......+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++..+... .....++..|+||
T Consensus 76 l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~y~aP 151 (237)
T cd05576 76 ISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENMYCAP 151 (237)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCccccCC
Confidence 434446999999999999999999999999999999999999999999999999988765432 2234567889999
Q ss_pred ccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhh
Q 006004 329 ELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLET 408 (665)
Q Consensus 329 E~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 408 (665)
|.+.+ ..++.++|+||+||++|+|++|..||...... + .. . . ....
T Consensus 152 E~~~~-~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~------------~~----~-~-----------~~~~ 197 (237)
T cd05576 152 EVGGI-SEETEACDWWSLGAILFELLTGKTLVECHPSG-----I------------NT----H-T-----------TLNI 197 (237)
T ss_pred cccCC-CCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----c------------cc----c-c-----------ccCC
Confidence 98865 56789999999999999999999877432110 0 00 0 0 0011
Q ss_pred ccCCcHHHHHHHHHhcccCcCCCcCH-----HHHHhCcCC
Q 006004 409 FRNFPQSALALVDKLLTIEPENRGSA-----ASALRSEFF 443 (665)
Q Consensus 409 ~~~~s~~a~dLI~~lL~~DP~~RpTa-----~eaL~Hp~f 443 (665)
...+++.+.+||.+||+.||.+|+|+ .++++||||
T Consensus 198 ~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 198 PEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred cccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 23578899999999999999999996 999999998
No 365
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=5e-37 Score=303.60 Aligned_cols=257 Identities=27% Similarity=0.406 Sum_probs=198.9
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc----CCc
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR----SGS 232 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~----~~~ 232 (665)
..+|++.+.||+|||+-||+++...++..||+|++.... .+..+..++|++..++++||||++++++.... ...
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 358999999999999999999999999999999998655 45667788999999999999999998865432 345
Q ss_pred EEEEEEecccc-chhhhc---CCCCCCChhHHHHHHHHHHHHHHHHHhCC--ccccCCCcccEEEcCCCcEEEEecccce
Q 006004 233 LYLVFEYMEHD-LAGLAT---TPGIKFTEPQIKCYMQQLLRGLEHCHSRG--ILHRDIKGSNLLINNAGVLKIGDFGLAT 306 (665)
Q Consensus 233 l~lV~Ey~~g~-ll~~~~---~~~~~lse~~i~~i~~QIl~aL~~LH~~g--IiHrDLKPeNILld~~g~lKL~DFGlA~ 306 (665)
.||+++|...+ +++.+. ..+..++|.++..|+.+|++||++||+.. ++||||||.|||+.+.+.++|.|||.++
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 89999998754 555443 24457999999999999999999999998 9999999999999999999999999997
Q ss_pred ecCCCC--C------CCcccccccccccCcccccCC--cccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhc
Q 006004 307 TYDPSQ--N------LPLTSRVVTLWYRAPELLLGA--TKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLC 376 (665)
Q Consensus 307 ~~~~~~--~------~~~~~~~gT~~Y~APE~l~~~--~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~ 376 (665)
...-.- + +....-..|..|+|||++.-. ...+.++|||||||+||.|+.|..||.- ++..-
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~---------~~~~G 248 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFER---------IYQQG 248 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchH---------HhhcC
Confidence 653110 0 011122458999999988632 3568999999999999999999999842 22211
Q ss_pred CCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 377 GSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 377 g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
|+-.-..- ....+++.. ..+|..+.+||+.||..||.+||++.++|.+
T Consensus 249 gSlaLAv~-----n~q~s~P~~-----------~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 249 GSLALAVQ-----NAQISIPNS-----------SRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred CeEEEeee-----ccccccCCC-----------CCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 11100000 000011111 1378899999999999999999999999864
No 366
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=6.1e-36 Score=315.11 Aligned_cols=252 Identities=21% Similarity=0.318 Sum_probs=198.8
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCc----EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCc
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGK----IVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGS 232 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~----~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~ 232 (665)
..+|+.++.||+|+||.||++++..+|. .||+|.+.... .......+.+|+.+++.++||||+++++++... .
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~--~ 82 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP--T 82 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC--C
Confidence 4579999999999999999999988876 46888876433 234444678999999999999999999988653 4
Q ss_pred EEEEEEecccc-chhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 233 LYLVFEYMEHD-LAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 233 l~lV~Ey~~g~-ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
.++++||+.++ +...+......+++..+..++.||+.||.|||++||+|+||||+|||++.++.+||+|||++..+...
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~ 162 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 162 (303)
T ss_pred ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCc
Confidence 67999999864 55555544556899999999999999999999999999999999999999999999999999876433
Q ss_pred CCC-CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcc
Q 006004 312 QNL-PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKS 389 (665)
Q Consensus 312 ~~~-~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~ 389 (665)
... ......++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+....+.. .+......+
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~-~~~~~~~~~---------- 230 (303)
T cd05110 163 EKEYNADGGKMPIKWMALECIHY-RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIP-DLLEKGERL---------- 230 (303)
T ss_pred ccccccCCCccccccCCHHHhcc-CCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HHHHCCCCC----------
Confidence 221 1223345778999999876 668999999999999999997 89999876543332 222210000
Q ss_pred ccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 390 AHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 390 ~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
......+.++.+||.+|+..||++||++.++++.
T Consensus 231 -----------------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 231 -----------------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred -----------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0012356789999999999999999999998763
No 367
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=5.8e-36 Score=308.49 Aligned_cols=252 Identities=21% Similarity=0.304 Sum_probs=198.2
Q ss_pred eeEEEEeeccCceEEEEEEECC---CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC-----C
Q 006004 160 FEKIDKIGQGTYSSVYKARDLE---TGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS-----G 231 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~---~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~-----~ 231 (665)
|++.+.||+|+||.||+|.+.. +++.||||++..........+.+.+|+.+++.++||||+++++++.... .
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 6678899999999999998653 5789999999765555566677889999999999999999999876432 1
Q ss_pred cEEEEEEeccccchh-hhcC-----CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccc
Q 006004 232 SLYLVFEYMEHDLAG-LATT-----PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLA 305 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~-~~~~-----~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA 305 (665)
..++++||+.++.+. .+.. ....+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence 247889999865443 3221 1125789999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCC-CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhH
Q 006004 306 TTYDPSQNL-PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDY 383 (665)
Q Consensus 306 ~~~~~~~~~-~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~ 383 (665)
......... ......+++.|++||.+.+ ..++.++|||||||++|+|++ |.+||.+.+..+....+.... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~--~---- 233 (273)
T cd05074 161 KKIYSGDYYRQGCASKLPVKWLALESLAD-NVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGN--R---- 233 (273)
T ss_pred ccccCCcceecCCCccCchhhcCHhHHhc-CccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCC--c----
Confidence 876432211 1123345678999998875 567899999999999999999 899998877655444443210 0
Q ss_pred HhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 384 WRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 384 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
......++..+.+|+.+||..+|.+||++.+++++
T Consensus 234 ----------------------~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 234 ----------------------LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred ----------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00012467889999999999999999999999864
No 368
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-36 Score=336.59 Aligned_cols=264 Identities=28% Similarity=0.493 Sum_probs=219.8
Q ss_pred ccCCCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeecc--
Q 006004 153 QPRRADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSR-- 229 (665)
Q Consensus 153 ~~~~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~-- 229 (665)
.|...+.|++++.||.|.+|.||+++++.+++..|+|++.......+ .+.-|.+||+.+ .|||++.++++|.-.
T Consensus 14 lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~de---EiE~eynil~~~~~hpnv~~fyg~~~k~~~ 90 (953)
T KOG0587|consen 14 LPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEE---EIELEYNMLKKYSHHPNVATFYGAFIKKDP 90 (953)
T ss_pred CCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccH---HHHHHHHHHHhccCCCCcceEEEEEEEecC
Confidence 45667789999999999999999999999999999999976654333 355689999988 699999999988632
Q ss_pred --CCcEEEEEEeccccchhhhcC--CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccc
Q 006004 230 --SGSLYLVFEYMEHDLAGLATT--PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLA 305 (665)
Q Consensus 230 --~~~l~lV~Ey~~g~ll~~~~~--~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA 305 (665)
.+.+|||||||.|+....+.+ .+.++.|+.+.+|++.++.||.|||.+.++|||||-.|||++.+|.|||+|||++
T Consensus 91 ~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvS 170 (953)
T KOG0587|consen 91 GNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVS 170 (953)
T ss_pred CCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeee
Confidence 457999999999876655443 2568999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCCcccccccccccCcccccCC----cccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCh
Q 006004 306 TTYDPSQNLPLTSRVVTLWYRAPELLLGA----TKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSE 381 (665)
Q Consensus 306 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~----~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~ 381 (665)
..++.... ...+.+|||.|||||++... ..|+..+|+||||++..||.-|.||+-..-+.- .++.+...|++
T Consensus 171 aQldsT~g-rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr---aLF~IpRNPPP 246 (953)
T KOG0587|consen 171 AQLDSTVG-RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR---ALFLIPRNPPP 246 (953)
T ss_pred eeeecccc-cccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh---hhccCCCCCCc
Confidence 98865443 34567999999999999753 457889999999999999999999997765443 33443334433
Q ss_pred hHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 382 DYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
.. ..+...+..+.+||..||.+|-++||+..++|+|||++..
T Consensus 247 kL-----------------------krp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 247 KL-----------------------KRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ 288 (953)
T ss_pred cc-----------------------cchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence 32 1234578889999999999999999999999999999843
No 369
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=4.2e-36 Score=308.89 Aligned_cols=245 Identities=24% Similarity=0.381 Sum_probs=193.7
Q ss_pred EEeeccCceEEEEEEECCCC------cEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 164 DKIGQGTYSSVYKARDLETG------KIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g------~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
+.||+|+||.||+|++.... +.||||.+.... .......+.+|+.+++.++||||+++++++.... ..|+||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA-TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNE-PQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc-chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCC-CeEEEE
Confidence 36899999999999986544 689999886432 2234556788999999999999999999987654 789999
Q ss_pred Eeccccch-hhhcC------CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCC-----cEEEEecccc
Q 006004 238 EYMEHDLA-GLATT------PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAG-----VLKIGDFGLA 305 (665)
Q Consensus 238 Ey~~g~ll-~~~~~------~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g-----~lKL~DFGlA 305 (665)
||+.++.+ ..+.. ....+++.++..++.||+.||.|||+.+++|+||||+|||++.++ .++|+|||++
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 99986444 43332 223478899999999999999999999999999999999999887 8999999999
Q ss_pred eecCCCCC-CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhH
Q 006004 306 TTYDPSQN-LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDY 383 (665)
Q Consensus 306 ~~~~~~~~-~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~ 383 (665)
........ .......++..|+|||++.+ ..++.++|||||||++|+|++ |+.||...+..+....+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~------- 230 (269)
T cd05044 159 RDIYKSDYYRKEGEGLLPVRWMAPESLLD-GKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGG------- 230 (269)
T ss_pred cccccccccccCcccCCCccccCHHHHcc-CCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCC-------
Confidence 76532211 11123345788999999876 568999999999999999998 999998877666555442210
Q ss_pred HhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 384 WRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 384 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.......+|..+.+||.+||..+|.+||++.++++
T Consensus 231 ---------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 231 ---------------------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred ---------------------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 00112357888999999999999999999999875
No 370
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1e-35 Score=306.93 Aligned_cols=250 Identities=21% Similarity=0.257 Sum_probs=187.8
Q ss_pred EEeeccCceEEEEEEEC--CCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEecc
Q 006004 164 DKIGQGTYSSVYKARDL--ETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYME 241 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~--~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~ 241 (665)
+.||+|+||.||+|.+. .++..+|+|.++.... ......+.+|+.++++++||||+++++++.... .+|+||||+.
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e~~~ 78 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVT-PYLLVMEFCP 78 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC-CcEEEEECCC
Confidence 36899999999999864 3456799998875543 233446788999999999999999999887654 6899999999
Q ss_pred ccchh-hhcC----CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC-CC
Q 006004 242 HDLAG-LATT----PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN-LP 315 (665)
Q Consensus 242 g~ll~-~~~~----~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~-~~ 315 (665)
++.+. .+.. ....+++..+..++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++........ ..
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~ 158 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT 158 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence 65544 3332 123456778889999999999999999999999999999999999999999999875432211 11
Q ss_pred cccccccccccCcccccCC------cccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhc
Q 006004 316 LTSRVVTLWYRAPELLLGA------TKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSK 388 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~------~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~ 388 (665)
.....+++.|+|||++.+. ..++.++|||||||++|+|++ |..||...+..+...........
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---------- 228 (269)
T cd05087 159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQL---------- 228 (269)
T ss_pred CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccC----------
Confidence 1234568889999988642 135789999999999999996 99999877665544332211000
Q ss_pred cccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 389 SAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 389 ~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
....| .....+++.+.+||..|+ .||++|||+.+++.
T Consensus 229 -------~~~~~------~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 229 -------KLPKP------RLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred -------CCCCC------ccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 00000 011246778899999998 68999999999985
No 371
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=7.5e-36 Score=305.11 Aligned_cols=241 Identities=26% Similarity=0.426 Sum_probs=195.2
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|++.+.||+|+||.||++.. +++.||+|.++... ....+.+|+.++++++||||+++++++... .+|+||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~~v~ 77 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHN--GLYIVM 77 (254)
T ss_pred HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC--CcEEEE
Confidence 4699999999999999999864 78889999986432 234678899999999999999999988653 479999
Q ss_pred Eeccc-cchhhhcCC-CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 238 EYMEH-DLAGLATTP-GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 238 Ey~~g-~ll~~~~~~-~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||+.+ ++...+... ...+++..+..++.||+.||.|||+.|++||||||+|||++.++.+||+|||++.......
T Consensus 78 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~--- 154 (254)
T cd05083 78 ELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV--- 154 (254)
T ss_pred ECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccC---
Confidence 99986 444444433 2358999999999999999999999999999999999999999999999999997653221
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATS 394 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~ 394 (665)
.....+..|+|||.+.+ ..++.++|+|||||++|+|++ |++||.+.+..+....+.+..
T Consensus 155 -~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~------------------ 214 (254)
T cd05083 155 -DNSKLPVKWTAPEALKH-KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY------------------ 214 (254)
T ss_pred -CCCCCCceecCHHHhcc-CCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCC------------------
Confidence 22234677999998875 568999999999999999997 999998877655444432210
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.. .....++..+.+||.+||..+|.+||++.+++.
T Consensus 215 -~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 215 -RM---------EPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred -CC---------CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00 011357889999999999999999999999985
No 372
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=5.7e-36 Score=305.45 Aligned_cols=236 Identities=22% Similarity=0.276 Sum_probs=186.5
Q ss_pred EEeeccCceEEEEEEECCCC----------cEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcE
Q 006004 164 DKIGQGTYSSVYKARDLETG----------KIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSL 233 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g----------~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l 233 (665)
+.||+|+||.||++.+..++ ..+++|.+..... ....+.+|+.+++.++||||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR---DSLAFFETASLMSQLSHKHLVKLYGVCVR--DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh---hHHHHHHHHHHHHcCCCcchhheeeEEec--CCc
Confidence 36899999999999998777 3578887654321 15667899999999999999999998876 367
Q ss_pred EEEEEeccccchhhhcCCC-CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCC-------cEEEEecccc
Q 006004 234 YLVFEYMEHDLAGLATTPG-IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAG-------VLKIGDFGLA 305 (665)
Q Consensus 234 ~lV~Ey~~g~ll~~~~~~~-~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g-------~lKL~DFGlA 305 (665)
|+||||+.++.+..+.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 9999999987666555433 3789999999999999999999999999999999999999888 7999999999
Q ss_pred eecCCCCCCCcccccccccccCcccccCC-cccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhH
Q 006004 306 TTYDPSQNLPLTSRVVTLWYRAPELLLGA-TKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDY 383 (665)
Q Consensus 306 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~-~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~ 383 (665)
..... .....++..|+|||++.+. ..++.++|||||||++|+|++ |..||...+..+....... .
T Consensus 156 ~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~-~------- 222 (259)
T cd05037 156 ITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQD-Q------- 222 (259)
T ss_pred ccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhc-C-------
Confidence 87543 1234567789999998764 378999999999999999999 5777766553322221110 0
Q ss_pred HhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 384 WRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 384 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.. .+ ......+.+||.+||..||.+|||+.++|+
T Consensus 223 ----------~~---~~---------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 223 ----------HR---LP---------MPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred ----------CC---CC---------CCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 00 00 011267899999999999999999999986
No 373
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=2e-35 Score=310.40 Aligned_cols=259 Identities=17% Similarity=0.174 Sum_probs=189.5
Q ss_pred CCeeEEEEeeccCceEEEEEEECCC---CcEEEEEEEecCCCCH--HHH-------HHHHHHHHHHHhCCCCCcceeeee
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLET---GKIVALKKVRFANMDP--ESV-------RFMAREIHILRKLDHPNVMKLEGL 225 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~---g~~vAiK~i~~~~~~~--~~~-------~~~~~Ei~iL~~L~HpnIV~l~~~ 225 (665)
.+|++.+.||+|+||.||+|++..+ +..+|+|+........ +.. .....+...+..++|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 4799999999999999999998887 6778888654332211 100 111233445566789999999987
Q ss_pred eeccCC---cEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEec
Q 006004 226 VTSRSG---SLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDF 302 (665)
Q Consensus 226 ~~~~~~---~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DF 302 (665)
...... ..+++||++...+...+.. ...+++..++.++.||+.||.|||+.+|+||||||+|||++.++.++|+||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DF 170 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVENTKEIFKR-IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDY 170 (294)
T ss_pred eeEecCCceEEEEEEehhccCHHHHHHh-hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEc
Confidence 654432 2367788776655544433 234688899999999999999999999999999999999999999999999
Q ss_pred ccceecCCCCC------CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhc
Q 006004 303 GLATTYDPSQN------LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLC 376 (665)
Q Consensus 303 GlA~~~~~~~~------~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~ 376 (665)
|+|+.+..... .......||+.|+|||++.+ ..++.++|||||||+||+|++|.+||.+......+....+
T Consensus 171 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~-~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~-- 247 (294)
T PHA02882 171 GIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNG-ACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAK-- 247 (294)
T ss_pred CCceeeccCCcccccccccccccCCCccccCHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhH--
Confidence 99987643211 11233468999999999876 6789999999999999999999999988743322222111
Q ss_pred CCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 377 GSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 377 g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.+++...... ...+...++.+.++++.|+..+|++||+..++++
T Consensus 248 ----~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 248 ----CDFIKRLHEG---------------KIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred ----HHHHHHhhhh---------------hhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 0111111000 0012356788999999999999999999999875
No 374
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=321.55 Aligned_cols=261 Identities=25% Similarity=0.356 Sum_probs=193.7
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
.++|..-..||+|+||.||+|.- .+|..||||++....... .+.|.+|+.+|.+++|||+|+|++||.+.+...+||
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l-~~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LV 150 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVL-SDGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLV 150 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEE-CCCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEE
Confidence 35788889999999999999986 455899999876544321 344899999999999999999999998765358999
Q ss_pred EEeccccch-hhhcCCCC-CCChhHHHHHHHHHHHHHHHHHhCC---ccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 237 FEYMEHDLA-GLATTPGI-KFTEPQIKCYMQQLLRGLEHCHSRG---ILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 237 ~Ey~~g~ll-~~~~~~~~-~lse~~i~~i~~QIl~aL~~LH~~g---IiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
+|||..+.+ ..+..... .|+|....+|+.+++.||+|||... |||||||++|||||.+.+.||+|||+|+.....
T Consensus 151 YEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~ 230 (361)
T KOG1187|consen 151 YEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG 230 (361)
T ss_pred EEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcc
Confidence 999996554 44444444 8999999999999999999999864 999999999999999999999999999765431
Q ss_pred CCCCcccc-cccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCCh--HHHHHHHHHhcCCCChhHHhhhc
Q 006004 312 QNLPLTSR-VVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTE--VEQMHKIFKLCGSPSEDYWRKSK 388 (665)
Q Consensus 312 ~~~~~~~~-~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~--~e~l~kI~~~~g~p~~~~~~~~~ 388 (665)
....... .||.+|+|||++.. +..+.++|||||||+|.||++|+.+...... ...+..... ..|.+.
T Consensus 231 -~~~~~~~~~gt~gY~~PEy~~~-g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~-------~~~~~~- 300 (361)
T KOG1187|consen 231 -DTSVSTTVMGTFGYLAPEYAST-GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAK-------PLLEEG- 300 (361)
T ss_pred -ccceeeecCCCCccCChhhhcc-CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHH-------HHHHCc-
Confidence 1112222 79999999999975 6789999999999999999999987764321 111111100 011110
Q ss_pred cccccCCCCCCcchhhhhhhccCCc-----HHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 389 SAHATSFKPQQPYKRKVLETFRNFP-----QSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 389 ~~~~~~~~~~~p~~~~~~~~~~~~s-----~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
......++.... ..++ ..+..+..+|+..+|.+||++.|+++
T Consensus 301 -~~~eiiD~~l~~--------~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 301 -KLREIVDPRLKE--------GEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred -chhheeCCCccC--------CCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 011111111100 0111 22667888999999999999999765
No 375
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.6e-35 Score=306.16 Aligned_cols=263 Identities=25% Similarity=0.377 Sum_probs=197.1
Q ss_pred CCeeEEEEeeccCceEEEEEEECC----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-CCc
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLE----TGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-SGS 232 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~----~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-~~~ 232 (665)
++|++++.||+|+||.||+++... +++.||||.+...... .....+.+|+++++.++||||+++++++... ...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~ 82 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS 82 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence 468999999999999999998643 4789999999765433 4566789999999999999999999988763 336
Q ss_pred EEEEEEeccccch-hhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 233 LYLVFEYMEHDLA-GLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 233 l~lV~Ey~~g~ll-~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
.|+||||+.++.+ ..+......+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++......
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPED 162 (284)
T ss_pred eEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccC
Confidence 8999999986544 444443446999999999999999999999999999999999999999999999999999877532
Q ss_pred CCCC--cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCC----hhHHh
Q 006004 312 QNLP--LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPS----EDYWR 385 (665)
Q Consensus 312 ~~~~--~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~----~~~~~ 385 (665)
.... .....++..|+|||.+.+ ..++.++|||||||++|+|++|..||........ . ..+... ..-+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~--~---~~~~~~~~~~~~~~~ 236 (284)
T cd05038 163 KDYYYVKEPGESPIFWYAPECLRT-SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFL--R---MIGIAQGQMIVTRLL 236 (284)
T ss_pred CcceeccCCCCCcccccCcHHHcc-CCCCcccchHHHhhhhheeeccCCCcccccchhc--c---ccccccccccHHHHH
Confidence 2111 112234567999998876 5688999999999999999999998865432110 0 000000 00000
Q ss_pred hhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 386 KSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 386 ~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
..... .. . .......+..+.+||.+||..||.+|||+.+++.
T Consensus 237 ~~~~~-~~----~-------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 237 ELLKE-GE----R-------LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred HHHHc-CC----c-------CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 00000 00 0 0011245688999999999999999999999986
No 376
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-37 Score=322.80 Aligned_cols=265 Identities=25% Similarity=0.398 Sum_probs=216.7
Q ss_pred CCCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCH-----HHHHHHHHHHHHHHhCCCCCcceeeeeeecc
Q 006004 155 RRADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDP-----ESVRFMAREIHILRKLDHPNVMKLEGLVTSR 229 (665)
Q Consensus 155 ~~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~-----~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~ 229 (665)
.-.++|-++..||+|+|+.||+|.|....++||+|+-....... ...+...+|..|.+.|+||.||++|++|.-.
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD 539 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence 34567999999999999999999999999999999876544322 2345677999999999999999999999987
Q ss_pred CCcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhC--CccccCCCcccEEEcC---CCcEEEEeccc
Q 006004 230 SGSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSR--GILHRDIKGSNLLINN---AGVLKIGDFGL 304 (665)
Q Consensus 230 ~~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~--gIiHrDLKPeNILld~---~g~lKL~DFGl 304 (665)
...+|-|+|||+|+.++.++.....++|.+++.|+.||+.||.||... -|||-||||.||||-+ -|.+||.||||
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred cccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 778999999999998888888888899999999999999999999987 5999999999999964 47899999999
Q ss_pred ceecCCCCCC-----Cc-ccccccccccCcccccC---CcccCcccchhhhHHHHHHHHhCCCCCCCCChHH-HHH--HH
Q 006004 305 ATTYDPSQNL-----PL-TSRVVTLWYRAPELLLG---ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVE-QMH--KI 372 (665)
Q Consensus 305 A~~~~~~~~~-----~~-~~~~gT~~Y~APE~l~~---~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e-~l~--kI 372 (665)
+..++.+... .+ ....||.||++||.+.- ...++.++||||+|||+|..|.|+.||....... ++. .|
T Consensus 620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTI 699 (775)
T KOG1151|consen 620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTI 699 (775)
T ss_pred hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhch
Confidence 9988654321 22 23478999999998852 2467899999999999999999999997643322 221 12
Q ss_pred HHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCC
Q 006004 373 FKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKT 445 (665)
Q Consensus 373 ~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~ 445 (665)
++. ....|++ -+.+++++++||++||++--+.|....++..||||.-
T Consensus 700 lkA---------------tEVqFP~-----------KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 700 LKA---------------TEVQFPP-----------KPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred hcc---------------eeccCCC-----------CCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 110 1111211 1358999999999999999999999999999999963
No 377
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=6.4e-35 Score=301.48 Aligned_cols=249 Identities=20% Similarity=0.302 Sum_probs=187.1
Q ss_pred EeeccCceEEEEEEECCCC--cEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEeccc
Q 006004 165 KIGQGTYSSVYKARDLETG--KIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEH 242 (665)
Q Consensus 165 ~LG~G~fg~Vy~a~~~~~g--~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g 242 (665)
.||+|+||.||++....++ ..+++|.+.... .......+.+|+.+++.++||||+++++.+.... .+|+||||+.+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~-~~~lv~e~~~~ 79 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA-SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAI-PYLLVFEYCEL 79 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC-ChHHHHHHHHHHHHHhccCCcchhheEEEecCCC-ccEEEEecCCC
Confidence 6999999999999754332 346677665433 2334567889999999999999999999988754 78999999997
Q ss_pred cch-hhhcCC---CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC-CCCcc
Q 006004 243 DLA-GLATTP---GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ-NLPLT 317 (665)
Q Consensus 243 ~ll-~~~~~~---~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~-~~~~~ 317 (665)
+.+ ..+... ...+++..++.++.||+.||.|||+.+|+||||||+|||++.++.+||+|||++....... .....
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 159 (268)
T cd05086 80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETED 159 (268)
T ss_pred CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhccc
Confidence 544 444322 2346777889999999999999999999999999999999999999999999986432111 11123
Q ss_pred cccccccccCcccccCC------cccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccc
Q 006004 318 SRVVTLWYRAPELLLGA------TKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSA 390 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~~~------~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~ 390 (665)
..+++..|+|||++... ..++.++|||||||++|+|++ |.+||...++.+.+..+......
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~------------ 227 (268)
T cd05086 160 DKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQV------------ 227 (268)
T ss_pred CCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhccc------------
Confidence 45678999999987531 245789999999999999997 57888887777766665432110
Q ss_pred cccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 391 HATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 391 ~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
..+.+ .....+++.+.+||..|+ .||.+|||+.++++
T Consensus 228 --~~~~~---------~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 228 --KLFKP---------QLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred --ccCCC---------ccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 00001 011246788999999999 78999999999975
No 378
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-37 Score=308.53 Aligned_cols=264 Identities=23% Similarity=0.368 Sum_probs=212.0
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHH-HhCCCCCcceeeeeeeccCCcEE
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHIL-RKLDHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL-~~L~HpnIV~l~~~~~~~~~~l~ 234 (665)
..++.+-+..||.|+||+|++.+++.+|+..|||.|+..+... ..++++.|.+.. +.-++||||++|+....+ +..|
T Consensus 62 ~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~k-eq~rll~e~d~~mks~~cp~IVkfyGa~F~E-GdcW 139 (361)
T KOG1006|consen 62 TSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEK-EQKRLLMEHDTVMKSSNCPNIVKFYGALFSE-GDCW 139 (361)
T ss_pred ccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchH-HHHHHHHHHHHHHhhcCCcHHHHHhhhhhcC-Ccee
Confidence 3456777889999999999999999999999999999877644 445567787765 445899999999987764 4789
Q ss_pred EEEEeccccchhhhc----CCCCCCChhHHHHHHHHHHHHHHHHHhC-CccccCCCcccEEEcCCCcEEEEecccceecC
Q 006004 235 LVFEYMEHDLAGLAT----TPGIKFTEPQIKCYMQQLLRGLEHCHSR-GILHRDIKGSNLLINNAGVLKIGDFGLATTYD 309 (665)
Q Consensus 235 lV~Ey~~g~ll~~~~----~~~~~lse~~i~~i~~QIl~aL~~LH~~-gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~ 309 (665)
|.||+|+-++..++. .....++|..+-.+...++.||+||... .||||||||+||||+..|.+||||||++-.+.
T Consensus 140 iCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv 219 (361)
T KOG1006|consen 140 ICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV 219 (361)
T ss_pred eeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHH
Confidence 999999976544332 2334699999999999999999999865 89999999999999999999999999987765
Q ss_pred CCCCCCcccccccccccCcccccCCc-ccCcccchhhhHHHHHHHHhCCCCCCCCC-hHHHHHHHHHhcCCCChhHHhhh
Q 006004 310 PSQNLPLTSRVVTLWYRAPELLLGAT-KYGAAIDMWSAGCILAELFAGKPIMPGRT-EVEQMHKIFKLCGSPSEDYWRKS 387 (665)
Q Consensus 310 ~~~~~~~~~~~gT~~Y~APE~l~~~~-~~~~~sDIWSLG~iLyeLltG~~pF~g~~-~~e~l~kI~~~~g~p~~~~~~~~ 387 (665)
.+-. .+.-+|...|||||-+.... .|+.++|+||||++|||+.||+.|+.+-+ ..+|+..+.. |.|+.-..+
T Consensus 220 ~SiA--kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~--gdpp~l~~~-- 293 (361)
T KOG1006|consen 220 DSIA--KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVI--GDPPILLFD-- 293 (361)
T ss_pred HHHH--hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHc--CCCCeecCc--
Confidence 4322 34447889999999997544 49999999999999999999999998754 3456655543 333321110
Q ss_pred ccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 388 KSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 388 ~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
...-+++..++.||..||.+|-..||...+++.+||++..
T Consensus 294 -------------------~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y 333 (361)
T KOG1006|consen 294 -------------------KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMY 333 (361)
T ss_pred -------------------ccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhh
Confidence 1112688999999999999999999999999999999753
No 379
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=324.63 Aligned_cols=254 Identities=25% Similarity=0.378 Sum_probs=208.2
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCc---E-EEEEEEecC-CCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGK---I-VALKKVRFA-NMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS 230 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~---~-vAiK~i~~~-~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~ 230 (665)
..++-.+.++||+|.||.||+|+.+..+. . ||+|..+.. ....+.+..+.+|.++|+.|+|||||+++|+...+.
T Consensus 155 ~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~ 234 (474)
T KOG0194|consen 155 SHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE 234 (474)
T ss_pred eccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC
Confidence 34567778999999999999999766432 3 899998863 357788889999999999999999999999887765
Q ss_pred CcEEEEEEeccccchhhhcCCC-CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecC
Q 006004 231 GSLYLVFEYMEHDLAGLATTPG-IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYD 309 (665)
Q Consensus 231 ~~l~lV~Ey~~g~ll~~~~~~~-~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~ 309 (665)
.+|||||+|.|+.+..+++.. ..++..+...|+.+.+.||+|||++++|||||-..|+|++.++.+||+||||++.-.
T Consensus 235 -Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~ 313 (474)
T KOG0194|consen 235 -PLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGS 313 (474)
T ss_pred -ccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCc
Confidence 799999999986665555544 469999999999999999999999999999999999999999999999999987643
Q ss_pred CCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhc
Q 006004 310 PSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSK 388 (665)
Q Consensus 310 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~ 388 (665)
.... .....--...|+|||.+.. ..|+.++||||+||++||+++ |..||++.+..+...+|.......
T Consensus 314 ~~~~-~~~~~klPirWLAPEtl~~-~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~--------- 382 (474)
T KOG0194|consen 314 QYVM-KKFLKKLPIRWLAPETLNT-GIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRM--------- 382 (474)
T ss_pred ceee-ccccccCcceecChhhhcc-CccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccC---------
Confidence 1111 0111123567999999986 589999999999999999988 889999999999888885421110
Q ss_pred cccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 389 SAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 389 ~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.....-|..+..++.+|+..||+.|+|+.++.+
T Consensus 383 ------------------~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 383 ------------------PIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred ------------------CCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 011246778889999999999999999998865
No 380
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=9e-36 Score=329.61 Aligned_cols=201 Identities=32% Similarity=0.517 Sum_probs=170.7
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccC-----CcE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRS-----GSL 233 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~-----~~l 233 (665)
.+..-+.||+|+||.||+++++++|+.||||.++... ....++.+.+|++||++|+|+|||+++++-+... ...
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 4667789999999999999999999999999987644 2334566889999999999999999998654332 235
Q ss_pred EEEEEeccccchh-hhcCC--CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcC--CC--cEEEEecccce
Q 006004 234 YLVFEYMEHDLAG-LATTP--GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINN--AG--VLKIGDFGLAT 306 (665)
Q Consensus 234 ~lV~Ey~~g~ll~-~~~~~--~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~--~g--~lKL~DFGlA~ 306 (665)
.+|||||.|+.+. .+.++ ...|+|.++..++..+..||.|||++||+||||||.||++-. +| ..||+|||.|+
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar 172 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR 172 (732)
T ss_pred eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence 7999999976554 44443 245999999999999999999999999999999999999853 23 47999999999
Q ss_pred ecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCC
Q 006004 307 TYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPG 362 (665)
Q Consensus 307 ~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g 362 (665)
.++.+. ..++.+||+.|.+||++.....|+..+|.|||||++|+.+||..||-.
T Consensus 173 el~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 173 ELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred cCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 886544 688999999999999998557899999999999999999999999854
No 381
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=9.2e-34 Score=283.19 Aligned_cols=244 Identities=39% Similarity=0.615 Sum_probs=196.8
Q ss_pred CceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEeccccchhhhc
Q 006004 170 TYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEHDLAGLAT 249 (665)
Q Consensus 170 ~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g~ll~~~~ 249 (665)
+||.||+|.+..+|+.+|+|++........ .+.+.+|++++++++|+||+++++++.... ..+++|||+.++.+..+.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDED-KLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeCC-EEEEEEeCCCCCCHHHHH
Confidence 589999999999999999999876543221 567889999999999999999999887754 789999999984444444
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccccccccccCcc
Q 006004 250 TPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVVTLWYRAPE 329 (665)
Q Consensus 250 ~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~gT~~Y~APE 329 (665)
.....+++..+..++.+|+.+|.+||+.||+|+||+|.||+++.++.++|+|||++....... ......++..|++||
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~pE 156 (244)
T smart00220 79 KKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEYMAPE 156 (244)
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCCCCHH
Confidence 333348999999999999999999999999999999999999999999999999998875432 234457889999999
Q ss_pred cccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhc
Q 006004 330 LLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETF 409 (665)
Q Consensus 330 ~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 409 (665)
.+.+ ..++.++|+||||+++|+|++|..||......+.+........... ....
T Consensus 157 ~~~~-~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~ 210 (244)
T smart00220 157 VLLG-KGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF-------------------------PPPE 210 (244)
T ss_pred HHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC-------------------------cccc
Confidence 8875 5678899999999999999999999987443333333222100000 0001
Q ss_pred cCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 410 RNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 410 ~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
..++..+.++|.+||..||.+||++.++++||||
T Consensus 211 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 211 WKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred ccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 1277889999999999999999999999999997
No 382
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=5e-34 Score=319.82 Aligned_cols=274 Identities=27% Similarity=0.368 Sum_probs=188.3
Q ss_pred CCCCeeEEEEeeccCceEEEEEEEC----------------CCCcEEEEEEEecCCCCH--H----------HHHHHHHH
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDL----------------ETGKIVALKKVRFANMDP--E----------SVRFMARE 207 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~----------------~~g~~vAiK~i~~~~~~~--~----------~~~~~~~E 207 (665)
..++|++.++||+|+||.||+|... ..++.||||.+....... + ..+....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 4678999999999999999999752 345689999986432110 0 11123457
Q ss_pred HHHHHhCCCCCc-----ceeeeeeecc-------CCcEEEEEEeccccchhhhcCC------------------------
Q 006004 208 IHILRKLDHPNV-----MKLEGLVTSR-------SGSLYLVFEYMEHDLAGLATTP------------------------ 251 (665)
Q Consensus 208 i~iL~~L~HpnI-----V~l~~~~~~~-------~~~l~lV~Ey~~g~ll~~~~~~------------------------ 251 (665)
+.++.+++|.++ ++++++|... .+..||||||+.++.+..+...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 778888876654 5666666431 2468999999997554433221
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccccccccccCcccc
Q 006004 252 GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVVTLWYRAPELL 331 (665)
Q Consensus 252 ~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~gT~~Y~APE~l 331 (665)
...+++..++.++.||+.+|.|||..+|+||||||+|||++.++.+||+|||++...............+|+.|+|||++
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l 382 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEEL 382 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhh
Confidence 11245678899999999999999999999999999999999999999999999976543322222222458999999988
Q ss_pred cCCcc-------------------cC--cccchhhhHHHHHHHHhCCC-CCCCCChHHHHHHHHHhcCCCChhHHhhhcc
Q 006004 332 LGATK-------------------YG--AAIDMWSAGCILAELFAGKP-IMPGRTEVEQMHKIFKLCGSPSEDYWRKSKS 389 (665)
Q Consensus 332 ~~~~~-------------------~~--~~sDIWSLG~iLyeLltG~~-pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~ 389 (665)
..... |+ ...||||+|||||+|++|.. ||.+........+. . ......|...+.
T Consensus 383 ~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~---~-~~~~~~~r~~~~ 458 (507)
T PLN03224 383 VMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQ---Y-DNDLNRWRMYKG 458 (507)
T ss_pred cCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhh---c-cchHHHHHhhcc
Confidence 63211 22 24799999999999999874 66543221111110 0 011122332211
Q ss_pred ccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCc---CCCcCHHHHHhCcCCCC
Q 006004 390 AHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEP---ENRGSAASALRSEFFKT 445 (665)
Q Consensus 390 ~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP---~~RpTa~eaL~Hp~f~~ 445 (665)
.. + ....+...++.++|||.+||..+| .+|+|+.|+|+||||..
T Consensus 459 ~~---------~---~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 459 QK---------Y---DFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred cC---------C---CcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 10 0 112245678999999999999876 68999999999999964
No 383
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=5.8e-35 Score=307.58 Aligned_cols=282 Identities=34% Similarity=0.532 Sum_probs=215.2
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECC---CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCC
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLE---TGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSG 231 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~---~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~ 231 (665)
....|..+++||+|+|++||++.+.. ..+.||+|.+.... ....+..|+++|..+ -+.||+++.+++..++
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts----~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd- 108 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS----SPSRILNELEMLYRLGGSDNIIKLNGCFRNND- 108 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc----CchHHHHHHHHHHHhccchhhhcchhhhccCC-
Confidence 34569999999999999999999988 78899999987544 234478999999999 5999999999988765
Q ss_pred cEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcC-CCcEEEEecccceecCC
Q 006004 232 SLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINN-AGVLKIGDFGLATTYDP 310 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~-~g~lKL~DFGlA~~~~~ 310 (665)
.+.+||||++++....+.. .++..+++.|++.++.||.++|.+|||||||||.|+|++. .+.-.|+|||||...+.
T Consensus 109 ~v~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~ 185 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDG 185 (418)
T ss_pred eeEEEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHh
Confidence 7999999999976665553 4778999999999999999999999999999999999984 56789999999972210
Q ss_pred CC-------------------------------------------CCCcccccccccccCcccccCCcccCcccchhhhH
Q 006004 311 SQ-------------------------------------------NLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAG 347 (665)
Q Consensus 311 ~~-------------------------------------------~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG 347 (665)
.. ......+.||++|+|||++......+.++||||.|
T Consensus 186 ~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~G 265 (418)
T KOG1167|consen 186 YQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAG 265 (418)
T ss_pred hhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecc
Confidence 00 00012357899999999999888889999999999
Q ss_pred HHHHHHHhCCCCC-CCCChHHHHHHHHHhcCCCChh----------HHhhhcc------------ccccCCCCCCcchhh
Q 006004 348 CILAELFAGKPIM-PGRTEVEQMHKIFKLCGSPSED----------YWRKSKS------------AHATSFKPQQPYKRK 404 (665)
Q Consensus 348 ~iLyeLltG~~pF-~g~~~~e~l~kI~~~~g~p~~~----------~~~~~~~------------~~~~~~~~~~p~~~~ 404 (665)
||+..+++++.|| ...++.+.+..|..+.|.-.-. +|.+..- .+.........+...
T Consensus 266 VI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~ 345 (418)
T KOG1167|consen 266 VILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTE 345 (418)
T ss_pred ceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccccccee
Confidence 9999999999665 5667777777776666643211 3332110 000000000000001
Q ss_pred hhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCC
Q 006004 405 VLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKT 445 (665)
Q Consensus 405 ~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~ 445 (665)
.......++..+.+|+++||..||.+|.||+++|+||||..
T Consensus 346 ~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~ 386 (418)
T KOG1167|consen 346 REIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE 386 (418)
T ss_pred eccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence 11112245668999999999999999999999999999984
No 384
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-34 Score=332.63 Aligned_cols=252 Identities=24% Similarity=0.433 Sum_probs=208.2
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCC-C----cEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCC
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLET-G----KIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSG 231 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~-g----~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ 231 (665)
.+..++.+.||+|.||.||.|....- | ..||||.++... +...+..|.+|..+|+.++|||||++++++.+ .+
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~-~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~-~~ 768 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS-SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD-SG 768 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCcceeeEEEeecC-CC
Confidence 45688999999999999999986543 3 248999887543 45667788999999999999999999999888 55
Q ss_pred cEEEEEEeccc-cchhhhcCC------CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEeccc
Q 006004 232 SLYLVFEYMEH-DLAGLATTP------GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGL 304 (665)
Q Consensus 232 ~l~lV~Ey~~g-~ll~~~~~~------~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGl 304 (665)
..+|++|||+| ||+..+... ...|+..+...++.+|+.|+.||+++++|||||-..|+||+....+||+|||+
T Consensus 769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccch
Confidence 78999999986 666666655 45689999999999999999999999999999999999999999999999999
Q ss_pred ceecCCCCCCCcccc-cccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChh
Q 006004 305 ATTYDPSQNLPLTSR-VVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSED 382 (665)
Q Consensus 305 A~~~~~~~~~~~~~~-~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~ 382 (665)
|+.+-.......... .-...|||||.+.. ..++.++|||||||+|||++| |..||++.++.+.+.-....-
T Consensus 849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d-~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg------ 921 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKD-GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG------ 921 (1025)
T ss_pred hHhhhhchheeccCccccceecCCHHHHhh-cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC------
Confidence 995432222111111 22467999999986 789999999999999999987 789999999988887654421
Q ss_pred HHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 383 YWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 383 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
....+...|..+.+|+..|+..+|++||+...+++
T Consensus 922 ----------------------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 922 ----------------------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred ----------------------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 11223467888999999999999999999999987
No 385
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.5e-34 Score=326.47 Aligned_cols=249 Identities=27% Similarity=0.442 Sum_probs=206.1
Q ss_pred CeeEEEEeeccCceEEEEEEECC-----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLE-----TGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSL 233 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~-----~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l 233 (665)
+.+..+.||+|.||+||+|+-.. +...||||.++... +....+.|.||+++|..|+|||||+|++++...+ .+
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a-~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~-P~ 564 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA-ENQARQDFRREAELLAELQHPNIVRLLGVCREGD-PL 564 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc-cHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC-ee
Confidence 57788999999999999998532 34679999997544 3446678999999999999999999999998765 79
Q ss_pred EEEEEeccc-cchhhhcCC---------CC----CCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEE
Q 006004 234 YLVFEYMEH-DLAGLATTP---------GI----KFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKI 299 (665)
Q Consensus 234 ~lV~Ey~~g-~ll~~~~~~---------~~----~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL 299 (665)
|+|||||.+ ||...+... +. +|+..+...++.||+.|+.||-++.+|||||-..|+||.++-.|||
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKI 644 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKI 644 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEe
Confidence 999999985 554444321 12 3889999999999999999999999999999999999999999999
Q ss_pred EecccceecCCCCCCCcc-cccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcC
Q 006004 300 GDFGLATTYDPSQNLPLT-SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCG 377 (665)
Q Consensus 300 ~DFGlA~~~~~~~~~~~~-~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g 377 (665)
+||||++.+-........ ...-...|||||.|+- +.|+.++||||+||+|||+++ |.-|+.|.++.|.++.|.+.
T Consensus 645 sDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly-~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g-- 721 (774)
T KOG1026|consen 645 SDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILY-GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAG-- 721 (774)
T ss_pred cccccchhhhhhhhhcccCCceeeeecCCHHHhhc-CcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcC--
Confidence 999999875332221111 2234678999999985 789999999999999999986 88999999999999988652
Q ss_pred CCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHH
Q 006004 378 SPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASAL 438 (665)
Q Consensus 378 ~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL 438 (665)
.+.....+-|.++.+|+..|++.+|.+||+++|+=
T Consensus 722 --------------------------~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 722 --------------------------QLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred --------------------------CcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 12334457899999999999999999999998863
No 386
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-34 Score=312.84 Aligned_cols=259 Identities=28% Similarity=0.438 Sum_probs=216.6
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
++|+++.++|.|+||.||+++++.+++..|+|+++.... ....-+..||-+++.++|||||.+++.+..+. .+||+|
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~--dd~~~iqqei~~~~dc~h~nivay~gsylr~d-klwicM 91 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG--DDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRD-KLWICM 91 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCC--ccccccccceeeeecCCCcChHHHHhhhhhhc-CcEEEE
Confidence 579999999999999999999999999999999987643 23455778999999999999999999888765 799999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcc
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLT 317 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~ 317 (665)
|||+|+.++.+..-.++++|.++...++..+.||+|||.+|=+|||||..|||+++.|.+||+|||.+..+...- ....
T Consensus 92 EycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati-~Krk 170 (829)
T KOG0576|consen 92 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATI-AKRK 170 (829)
T ss_pred EecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhh-hhhh
Confidence 999998888877777799999999999999999999999999999999999999999999999999998775432 2346
Q ss_pred cccccccccCccccc--CCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 318 SRVVTLWYRAPELLL--GATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 318 ~~~gT~~Y~APE~l~--~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
+++||+.|||||+.. ....|...+|||++|++..|+-.-++|....-....+..+.+-...|+.
T Consensus 171 sfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~-------------- 236 (829)
T KOG0576|consen 171 SFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPT-------------- 236 (829)
T ss_pred cccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCc--------------
Confidence 789999999999863 3467999999999999999999999886554444333333221111110
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFK 444 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~ 444 (665)
.+.-...++.+.+|++.+|.++|.+|||++.+|+|||..
T Consensus 237 ----------lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs 275 (829)
T KOG0576|consen 237 ----------LKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVS 275 (829)
T ss_pred ----------ccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeec
Confidence 111124677889999999999999999999999999975
No 387
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-32 Score=294.18 Aligned_cols=257 Identities=24% Similarity=0.322 Sum_probs=203.7
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
+...+.++||+|-||.|.+|.- ..+..||+|+++.... ......|.+||++|.+|+|||||.|++++..++ .+++||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~-~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De-PicmI~ 614 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDAT-KNARNDFLKEIKILSRLKHPNIVELLGVCVQDD-PLCMIT 614 (807)
T ss_pred hheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccc-hhHHHHHHHHHHHHhccCCCCeeEEEeeeecCC-chHHHH
Confidence 4578899999999999999985 4468999999986543 344577899999999999999999999988755 799999
Q ss_pred Eeccc-cchhhhcCCCCC-CChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 238 EYMEH-DLAGLATTPGIK-FTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 238 Ey~~g-~ll~~~~~~~~~-lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
|||+. +|-+.+.....+ +.-.....++.||+.||+||.+.++|||||.+.|+|++.++++||+|||+++.+-......
T Consensus 615 EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~ 694 (807)
T KOG1094|consen 615 EYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR 694 (807)
T ss_pred HHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCcee
Confidence 99985 555555443322 3455677799999999999999999999999999999999999999999999653333222
Q ss_pred -cccccccccccCcccccCCcccCcccchhhhHHHHHHHH--hCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccc
Q 006004 316 -LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELF--AGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHA 392 (665)
Q Consensus 316 -~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLl--tG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~ 392 (665)
....+-...|||+|.++. ++++.++|+|++|++|||++ +...||...++.+.+...-..+......
T Consensus 695 vqgr~vlpiRwmawEsill-gkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~---------- 763 (807)
T KOG1094|consen 695 VQGRAVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQ---------- 763 (807)
T ss_pred eecceeeeeeehhHHHHHh-ccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcc----------
Confidence 223355788999999986 67999999999999999974 5778998888777766654433222111
Q ss_pred cCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 393 TSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 393 ~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.....++-.+..+.+||.+|+..|-.+||+.+++-.
T Consensus 764 -----------~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 764 -----------VVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred -----------eeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 011223457888999999999999999999999854
No 388
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-33 Score=308.29 Aligned_cols=251 Identities=24% Similarity=0.370 Sum_probs=215.7
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCc---EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGK---IVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~---~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~l 235 (665)
...+.+.||.|-||.||+++.+..|+ .||||.++.. ..+.....|+.|..||-+++||||++|.+++.... -+.|
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G-ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~-PvMI 707 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG-YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSK-PVMI 707 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccC-ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCc-eeEE
Confidence 35788899999999999999887774 6999999754 45667778999999999999999999999987654 7899
Q ss_pred EEEeccccchh-hhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCC
Q 006004 236 VFEYMEHDLAG-LATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL 314 (665)
Q Consensus 236 V~Ey~~g~ll~-~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~ 314 (665)
|+|||+.+.++ .+....+.|+..|+..+++.|+.|+.||-++|+|||||-..||||+.+-.+|++||||++.+.++...
T Consensus 708 iTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~ 787 (996)
T KOG0196|consen 708 ITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 787 (996)
T ss_pred EhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCc
Confidence 99999966554 55556678999999999999999999999999999999999999999999999999999988665544
Q ss_pred Ccccccc--cccccCcccccCCcccCcccchhhhHHHHHHHH-hCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 315 PLTSRVV--TLWYRAPELLLGATKYGAAIDMWSAGCILAELF-AGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 315 ~~~~~~g--T~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLl-tG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
..++.-| ...|.|||.|.- .+++.++||||+||+|||.+ .|..||...++.+.+..|.+...-|++
T Consensus 788 ~ytt~GGKIPiRWTAPEAIa~-RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpP---------- 856 (996)
T KOG0196|consen 788 AYTTLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPP---------- 856 (996)
T ss_pred cccccCCccceeecChhHhhh-cccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCC----------
Confidence 4444333 467999999975 78999999999999999965 599999999999999999775544433
Q ss_pred ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 392 ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 392 ~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
.+.|..+..|+..|+++|-.+||+..|++.+
T Consensus 857 ------------------mDCP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 857 ------------------MDCPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred ------------------CCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 3678889999999999999999999999863
No 389
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.98 E-value=5.1e-33 Score=311.51 Aligned_cols=250 Identities=27% Similarity=0.423 Sum_probs=193.0
Q ss_pred eeEEEEeeccCceE-EEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcEEEEE
Q 006004 160 FEKIDKIGQGTYSS-VYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 160 y~~~~~LG~G~fg~-Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
|.--+.+|.|+-|+ ||+|.. .|+.||||.+- .+......+||..|+.- +|||||++++.-.+ .+.+||..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll-----~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d-~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLL-----EEFFDFAQREIQLLQESDEHPNVIRYYCSEQD-RQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHh-----hHhHHHHHHHHHHHHhccCCCceEEEEeeccC-CceEEEEe
Confidence 33445689999985 799987 67899999764 35566778999999998 69999999997655 45899999
Q ss_pred EeccccchhhhcCCCC--CC-ChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcC---CC--cEEEEecccceecC
Q 006004 238 EYMEHDLAGLATTPGI--KF-TEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINN---AG--VLKIGDFGLATTYD 309 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~--~l-se~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~---~g--~lKL~DFGlA~~~~ 309 (665)
|+|...|.+++..... .. .....+..+.|+++||+|||+.+||||||||.||||+. ++ .++|+|||+++.+.
T Consensus 583 ELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 583 ELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred hHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 9999988888776421 11 11456889999999999999999999999999999986 34 68999999999987
Q ss_pred CCCCC--CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhC-CCCCCCCChHHHHHHHHHhcCCCChhHHhh
Q 006004 310 PSQNL--PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAG-KPIMPGRTEVEQMHKIFKLCGSPSEDYWRK 386 (665)
Q Consensus 310 ~~~~~--~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG-~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~ 386 (665)
.+... ......||-+|+|||++... .-..++||||||||+|+.++| ..||...- +.-..|... ..
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~-~~~~avDiFslGCvfyYvltgG~HpFGd~~--~R~~NIl~~--~~------- 730 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLRED-RKTQAVDIFSLGCVFYYVLTGGSHPFGDSL--ERQANILTG--NY------- 730 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhcc-ccCcccchhhcCceEEEEecCCccCCCchH--HhhhhhhcC--cc-------
Confidence 65432 24456789999999999864 346799999999999999887 78986542 222333221 10
Q ss_pred hccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 387 SKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 387 ~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
.+...-.....+|.+||.+||++||..||+|.++|.||||.+.
T Consensus 731 -----------------~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ 773 (903)
T KOG1027|consen 731 -----------------TLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS 773 (903)
T ss_pred -----------------ceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence 0111111122289999999999999999999999999999864
No 390
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.98 E-value=1.2e-32 Score=266.18 Aligned_cols=214 Identities=27% Similarity=0.427 Sum_probs=181.8
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l~l 235 (665)
.++...+..||+|+||.|-+.++..+|...|+|.++..- +....+++++|+.+..+. .+|++|.+|+.+..+ +.+||
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv-n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~re-gdvwI 122 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV-NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFRE-GDVWI 122 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc-ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcc-ccEEE
Confidence 356777889999999999999999999999999997543 344556678899987776 899999999977664 57999
Q ss_pred EEEeccccchh---hhcCCCCCCChhHHHHHHHHHHHHHHHHHhC-CccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 236 VFEYMEHDLAG---LATTPGIKFTEPQIKCYMQQLLRGLEHCHSR-GILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 236 V~Ey~~g~ll~---~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~-gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
.||.|..++.. .....+..++|..+-+++..++.||.|||++ .|||||+||+||||+.+|++|+||||.+-.+..+
T Consensus 123 cME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS 202 (282)
T KOG0984|consen 123 CMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDS 202 (282)
T ss_pred eHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhh
Confidence 99999976544 4445778899999999999999999999986 8999999999999999999999999999877544
Q ss_pred CCCCcccccccccccCcccccC---CcccCcccchhhhHHHHHHHHhCCCCCC-CCChHHHHHHHHH
Q 006004 312 QNLPLTSRVVTLWYRAPELLLG---ATKYGAAIDMWSAGCILAELFAGKPIMP-GRTEVEQMHKIFK 374 (665)
Q Consensus 312 ~~~~~~~~~gT~~Y~APE~l~~---~~~~~~~sDIWSLG~iLyeLltG~~pF~-g~~~~e~l~kI~~ 374 (665)
-. .+.-.|...|||||.+.. ...|+.++||||||++++||.+++.||. ..++.+++.++..
T Consensus 203 iA--kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe 267 (282)
T KOG0984|consen 203 IA--KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE 267 (282)
T ss_pred hH--HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence 32 233467889999999853 3479999999999999999999999986 5788899998876
No 391
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.98 E-value=2.3e-32 Score=296.66 Aligned_cols=247 Identities=23% Similarity=0.383 Sum_probs=202.3
Q ss_pred eEEEEeeccCceEEEEEEECCC--C--cEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 161 EKIDKIGQGTYSSVYKARDLET--G--KIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 161 ~~~~~LG~G~fg~Vy~a~~~~~--g--~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
.+-+.||.|-||.||+|....- | --||||..+.+. +++..+.|+.|..+|+.++|||||+|++++... ..|||
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~-t~d~tekflqEa~iMrnfdHphIikLIGv~~e~--P~Wiv 468 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC-TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ--PMWIV 468 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC-ChhhHHHHHHHHHHHHhCCCcchhheeeeeecc--ceeEE
Confidence 3446799999999999986432 3 358899887544 456678899999999999999999999999864 58999
Q ss_pred EEecc-ccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 237 FEYME-HDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 237 ~Ey~~-g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
||++. |.|..++.+....|+......|++||+.||.|||+...|||||-..|||+....-+||+||||++.+.......
T Consensus 469 mEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYk 548 (974)
T KOG4257|consen 469 MELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYK 548 (974)
T ss_pred EecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccchhh
Confidence 99998 55666666667789999999999999999999999999999999999999999999999999999886554322
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccC
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATS 394 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~ 394 (665)
.+...-..-|||||.+. ...++.++|||-|||++||+|. |..||.|-.+.+.+-.|.+.-.
T Consensus 549 aS~~kLPIKWmaPESIN-fRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeR----------------- 610 (974)
T KOG4257|consen 549 ASRGKLPIKWMAPESIN-FRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGER----------------- 610 (974)
T ss_pred ccccccceeecCccccc-hhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCC-----------------
Confidence 22222255699999886 4778999999999999999875 8899999887776666543211
Q ss_pred CCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 395 FKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 395 ~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
...+++.|+.+..|+.+|+++||.+||+..++..
T Consensus 611 -----------lP~P~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 611 -----------LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred -----------CCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 1123478899999999999999999999988753
No 392
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.98 E-value=4.9e-32 Score=293.27 Aligned_cols=256 Identities=22% Similarity=0.370 Sum_probs=209.0
Q ss_pred cCCccCCCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc
Q 006004 150 KGWQPRRADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR 229 (665)
Q Consensus 150 ~~~~~~~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~ 229 (665)
+.|...+.+ ...-.+||-|-||.||.+.|+.....||||.++.+.+ .+..|+.|..+|+.++|||+|+|+++|..+
T Consensus 260 DkWEmeRtd-ItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM---eveEFLkEAAvMKeikHpNLVqLLGVCT~E 335 (1157)
T KOG4278|consen 260 DKWEMERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTHE 335 (1157)
T ss_pred chhhccchh-eeeeeccCCCcccceeeeeeeccceeeehhhhhhcch---hHHHHHHHHHHHHhhcCccHHHHhhhhccC
Confidence 567666653 7778899999999999999999999999999986554 366789999999999999999999999876
Q ss_pred CCcEEEEEEecc-ccchhhhcCCC-CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEeccccee
Q 006004 230 SGSLYLVFEYME-HDLAGLATTPG-IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATT 307 (665)
Q Consensus 230 ~~~l~lV~Ey~~-g~ll~~~~~~~-~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~ 307 (665)
. .+|||+|||. |+|++++...+ ..++.-.+..++.||..|++||..+++|||||-..|+|+..+..+||+||||+++
T Consensus 336 p-PFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRl 414 (1157)
T KOG4278|consen 336 P-PFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRL 414 (1157)
T ss_pred C-CeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhh
Confidence 5 7899999997 67777766544 3466667788889999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhh
Q 006004 308 YDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRK 386 (665)
Q Consensus 308 ~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~ 386 (665)
+..+.........-..-|.|||-+. ...++.++|||+|||+|||+.| |..||+|.+-...+..+.+..
T Consensus 415 MtgDTYTAHAGAKFPIKWTAPEsLA-yNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgy---------- 483 (1157)
T KOG4278|consen 415 MTGDTYTAHAGAKFPIKWTAPESLA-YNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGY---------- 483 (1157)
T ss_pred hcCCceecccCccCcccccCccccc-ccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccc----------
Confidence 8665432222222356699999886 3678999999999999999976 889999987655544443210
Q ss_pred hccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 387 SKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 387 ~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
..+.....|+.+..|+..|+++.|..||+.+++-+
T Consensus 484 ------------------RM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHq 518 (1157)
T KOG4278|consen 484 ------------------RMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQ 518 (1157)
T ss_pred ------------------cccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHH
Confidence 11223478999999999999999999999887643
No 393
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.97 E-value=1.9e-31 Score=323.34 Aligned_cols=252 Identities=21% Similarity=0.305 Sum_probs=184.9
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
.|...+.||+|+||.||+|++..++..||||++...... ...|+.++++++|||||++++++.... ..|+|||
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~l~~l~HpnIv~~~~~~~~~~-~~~lv~E 763 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI------PSSEIADMGKLQHPNIVKLIGLCRSEK-GAYLIHE 763 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc------cHHHHHHHhhCCCCCcceEEEEEEcCC-CCEEEEe
Confidence 356677899999999999999999999999998643211 134688999999999999999998765 6899999
Q ss_pred eccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHH---hCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCC
Q 006004 239 YMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCH---SRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLP 315 (665)
Q Consensus 239 y~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH---~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~ 315 (665)
|++++.+..+.. .+++.++..++.||+.||+||| ..+|+||||||+|||++.++..++. ||.+......
T Consensus 764 y~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~---- 835 (968)
T PLN00113 764 YIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD---- 835 (968)
T ss_pred CCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC----
Confidence 999766655543 4889999999999999999999 6699999999999999998888875 6665443211
Q ss_pred cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCC-CChhHHhhhcccccc
Q 006004 316 LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTE-VEQMHKIFKLCGS-PSEDYWRKSKSAHAT 393 (665)
Q Consensus 316 ~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~-~e~l~kI~~~~g~-p~~~~~~~~~~~~~~ 393 (665)
....+|+.|+|||++.+ ..|+.++|||||||++|||++|+.||..... ...+....+.... .....|
T Consensus 836 -~~~~~t~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 904 (968)
T PLN00113 836 -TKCFISSAYVAPETRET-KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMW--------- 904 (968)
T ss_pred -CCccccccccCcccccC-CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhhe---------
Confidence 23368999999999876 6789999999999999999999999853221 1111111111000 000000
Q ss_pred CCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 394 SFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 394 ~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
..+... ...........++.+|+.+|++.||++|||+.|+++.
T Consensus 905 -~~~~~~---~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 905 -IDPSIR---GDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred -eCcccc---CCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 000000 0000001122357789999999999999999999874
No 394
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=7.3e-32 Score=295.90 Aligned_cols=249 Identities=22% Similarity=0.363 Sum_probs=207.2
Q ss_pred CeeEEEEeeccCceEEEEEEECCC-Cc--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLET-GK--IVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~-g~--~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~l 235 (665)
+..+.++||+|.||+|+++.|... |+ .||||.++...... ....|.+|+.+|.+|+|||+|+||+++.+. .+.+
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~q--p~mM 187 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLDQ--PAMM 187 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeeccc--hhhH
Confidence 566778999999999999998753 33 68999998766544 567789999999999999999999999873 5789
Q ss_pred EEEeccc-cchhhhcC-CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC
Q 006004 236 VFEYMEH-DLAGLATT-PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 236 V~Ey~~g-~ll~~~~~-~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~ 313 (665)
|||++.. .|++.+.+ ....|.......|+.||+.||.||..+++|||||-..||||.....|||+||||.+.+.....
T Consensus 188 V~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned 267 (1039)
T KOG0199|consen 188 VFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENED 267 (1039)
T ss_pred HhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCc
Confidence 9999985 55555554 455788999999999999999999999999999999999999999999999999998865543
Q ss_pred CC--cccccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccc
Q 006004 314 LP--LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSA 390 (665)
Q Consensus 314 ~~--~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~ 390 (665)
.. .........|.|||.|.. ..++.++|+|++||+||||++ |..||.|....+++++|-+.
T Consensus 268 ~Yvm~p~rkvPfAWCaPEsLrh-~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~--------------- 331 (1039)
T KOG0199|consen 268 MYVMAPQRKVPFAWCAPESLRH-RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAG--------------- 331 (1039)
T ss_pred ceEecCCCcCcccccCHhHhcc-ccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcccc---------------
Confidence 22 111223556999999986 789999999999999999987 67999999999999887431
Q ss_pred cccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 391 HATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 391 ~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
......+..+.++.+++..|+..+|++|||...+..
T Consensus 332 -------------erLpRPk~csedIY~imk~cWah~paDRptFsair~ 367 (1039)
T KOG0199|consen 332 -------------ERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE 367 (1039)
T ss_pred -------------ccCCCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence 112233567899999999999999999999988753
No 395
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=8.2e-32 Score=291.03 Aligned_cols=204 Identities=28% Similarity=0.450 Sum_probs=175.8
Q ss_pred cCCCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHH------HHHHHHHHHHHHhCC---CCCcceeee
Q 006004 154 PRRADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPES------VRFMAREIHILRKLD---HPNVMKLEG 224 (665)
Q Consensus 154 ~~~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~------~~~~~~Ei~iL~~L~---HpnIV~l~~ 224 (665)
+....+|..++.||+|+||.|++|.++++...|+||.|.+..+-.+. +-.+-.||+||..|+ |+||+++++
T Consensus 557 ~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLd 636 (772)
T KOG1152|consen 557 YKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLD 636 (772)
T ss_pred ecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhh
Confidence 34455799999999999999999999999999999999766532111 223557999999997 999999999
Q ss_pred eeeccCCcEEEEEEeccc--cchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEec
Q 006004 225 LVTSRSGSLYLVFEYMEH--DLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDF 302 (665)
Q Consensus 225 ~~~~~~~~l~lV~Ey~~g--~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DF 302 (665)
+|++.+ .+||+||-... +|.+. +.....++|.+++.+++|+..|+++||+.||||||||-+|++++.+|-+||+||
T Consensus 637 fFEddd-~yyl~te~hg~gIDLFd~-IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 637 FFEDDD-YYYLETEVHGEGIDLFDF-IEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred eeecCC-eeEEEecCCCCCcchhhh-hhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeec
Confidence 999865 89999998764 34444 445568999999999999999999999999999999999999999999999999
Q ss_pred ccceecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCC
Q 006004 303 GLATTYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPG 362 (665)
Q Consensus 303 GlA~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g 362 (665)
|.|... .+.+...++||..|.|||++.|..+.+..-|||+||++||.++....||..
T Consensus 715 gsaa~~---ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 715 GSAAYT---KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred cchhhh---cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 999875 345678899999999999999888889999999999999999988888753
No 396
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=5.4e-29 Score=241.70 Aligned_cols=213 Identities=40% Similarity=0.628 Sum_probs=180.0
Q ss_pred eeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEeccccch
Q 006004 166 IGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEHDLA 245 (665)
Q Consensus 166 LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g~ll 245 (665)
||+|.+|.||++++..+++.+++|++....... ....+.+|+.+++.+.|++|+++++++... ...+++|||+.+..+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDE-NHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecC-CeEEEEEecCCCCcH
Confidence 689999999999998889999999997654321 356688999999999999999999998875 478999999995444
Q ss_pred h-hhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcC-CCcEEEEecccceecCCCCCCCcccccccc
Q 006004 246 G-LATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINN-AGVLKIGDFGLATTYDPSQNLPLTSRVVTL 323 (665)
Q Consensus 246 ~-~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~-~g~lKL~DFGlA~~~~~~~~~~~~~~~gT~ 323 (665)
. .+......+++.++..++.+++.+|.+||+.|++|+||+|.||+++. ++.++|+|||.+........ ......+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~ 157 (215)
T cd00180 79 KDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIVGTP 157 (215)
T ss_pred HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcccCCC
Confidence 4 44333246899999999999999999999999999999999999999 89999999999987654321 123346788
Q ss_pred cccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchh
Q 006004 324 WYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKR 403 (665)
Q Consensus 324 ~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~ 403 (665)
.|++||.+.....++.+.|+|+||+++++|
T Consensus 158 ~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------------- 187 (215)
T cd00180 158 AYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------------- 187 (215)
T ss_pred CccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------------------
Confidence 899999887633778999999999999998
Q ss_pred hhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCc
Q 006004 404 KVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSE 441 (665)
Q Consensus 404 ~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp 441 (665)
..+.++|..||..||.+||++.++++|+
T Consensus 188 ----------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ----------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ----------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 2356789999999999999999999875
No 397
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=8e-30 Score=271.33 Aligned_cols=262 Identities=24% Similarity=0.316 Sum_probs=187.0
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHh--CCCCCcceeeeeeeccC---Cc
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRK--LDHPNVMKLEGLVTSRS---GS 232 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~--L~HpnIV~l~~~~~~~~---~~ 232 (665)
+..++++.||+|.||.||+|+. +++.||||++.. +..+.+..|-+|... ++|+||++++++-.... -.
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~-----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPE-----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred CchhhHHHhhcCccceeehhhc--cCceeEEEecCH-----HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 4577888999999999999985 568999999863 456778888888876 48999999998644321 25
Q ss_pred EEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhC---------CccccCCCcccEEEcCCCcEEEEecc
Q 006004 233 LYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSR---------GILHRDIKGSNLLINNAGVLKIGDFG 303 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~---------gIiHrDLKPeNILld~~g~lKL~DFG 303 (665)
++||+||.+.+.+..++..+ .+++.+..+++..|+.||+|||+- .|+|||||..||||.++++.-|+|||
T Consensus 283 ywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFG 361 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFG 361 (534)
T ss_pred eeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccc
Confidence 89999999866555555444 589999999999999999999963 59999999999999999999999999
Q ss_pred cceecCCCCC-CCcccccccccccCcccccCCcccC-----cccchhhhHHHHHHHHhCCCCCC-CCChHHHHHHHHHhc
Q 006004 304 LATTYDPSQN-LPLTSRVVTLWYRAPELLLGATKYG-----AAIDMWSAGCILAELFAGKPIMP-GRTEVEQMHKIFKLC 376 (665)
Q Consensus 304 lA~~~~~~~~-~~~~~~~gT~~Y~APE~l~~~~~~~-----~~sDIWSLG~iLyeLltG~~pF~-g~~~~e~l~kI~~~~ 376 (665)
||..+.+... ......+||..|||||++.+...+. .+.||||+|.|||||++.-.-+. +..+.=++.--..+-
T Consensus 362 LAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG 441 (534)
T KOG3653|consen 362 LALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVG 441 (534)
T ss_pred eeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhc
Confidence 9999876543 2344479999999999998755444 46899999999999999765442 222111111111111
Q ss_pred CCCChhHHhhhccccccCCCCCCcchhhhhhhcc--CCcHHHHHHHHHhcccCcCCCcCHH
Q 006004 377 GSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFR--NFPQSALALVDKLLTIEPENRGSAA 435 (665)
Q Consensus 377 g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~--~~s~~a~dLI~~lL~~DP~~RpTa~ 435 (665)
..|.-+-.... ...+...|. +...+. .....+++.|+.|++.||+.|.||.
T Consensus 442 ~hPt~e~mq~~-----VV~kK~RP~---~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~ 494 (534)
T KOG3653|consen 442 NHPTLEEMQEL-----VVRKKQRPK---IPDAWRKHAGMAVLCETIEECWDHDAEARLTAG 494 (534)
T ss_pred CCCCHHHHHHH-----HHhhccCCC---ChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence 12221111100 000000110 111111 2335578999999999999999985
No 398
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.96 E-value=1.3e-28 Score=244.48 Aligned_cols=212 Identities=37% Similarity=0.561 Sum_probs=175.4
Q ss_pred eeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEe
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEY 239 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey 239 (665)
|.+.+.||.|++|.||++.+..+++.+|+|.+...... ...+.+.+|++.+++++|+||+++++++.... ..++++||
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~-~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDPE-PLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecCC-ceEEEEec
Confidence 56789999999999999999988999999999765432 25667889999999999999999999887654 78999999
Q ss_pred ccccchhhhcCCCCC-CChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccc
Q 006004 240 MEHDLAGLATTPGIK-FTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTS 318 (665)
Q Consensus 240 ~~g~ll~~~~~~~~~-lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~ 318 (665)
+.+..+..+...... +++..+..++.+++.+|.+||+.|++|+||+|.||+++.++.++|+|||++..+..........
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (225)
T smart00221 79 CEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKT 158 (225)
T ss_pred cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccc
Confidence 998444444433334 8999999999999999999999999999999999999999999999999998875432112344
Q ss_pred ccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCC-CChH-HHHHHHH
Q 006004 319 RVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPG-RTEV-EQMHKIF 373 (665)
Q Consensus 319 ~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g-~~~~-e~l~kI~ 373 (665)
..++..|++||.+.+...++.++|+|+||+++|+|++|++||.. .+.. +....|.
T Consensus 159 ~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~ 215 (225)
T smart00221 159 VKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWS 215 (225)
T ss_pred eeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHh
Confidence 57788999999884446678899999999999999999999988 4444 4444443
No 399
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-28 Score=284.54 Aligned_cols=249 Identities=27% Similarity=0.410 Sum_probs=196.7
Q ss_pred eeEEEEeeccCceEEEEEEEC----C---CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCC
Q 006004 160 FEKIDKIGQGTYSSVYKARDL----E---TGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSG 231 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~----~---~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~ 231 (665)
..+.+.||+|.||.|++|.-. . ....||||.++..... ...+.+..|+++|+.+ +|+||+.+++++.. .+
T Consensus 298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~-~~ 375 (609)
T KOG0200|consen 298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQ-DG 375 (609)
T ss_pred ccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeecc-CC
Confidence 466679999999999998733 1 1457999998765444 6677899999999998 69999999999887 56
Q ss_pred cEEEEEEeccc-cchhhhcCCC---------------CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCC
Q 006004 232 SLYLVFEYMEH-DLAGLATTPG---------------IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAG 295 (665)
Q Consensus 232 ~l~lV~Ey~~g-~ll~~~~~~~---------------~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g 295 (665)
.+++|+||+.. +|+..+.... ..|+..+...++.||+.|++||++..+|||||-..||||..+.
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~ 455 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNK 455 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCC
Confidence 89999999985 5555554443 2489999999999999999999999999999999999999999
Q ss_pred cEEEEecccceecCCCCCCCcccccc--cccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCC-hHHHHHH
Q 006004 296 VLKIGDFGLATTYDPSQNLPLTSRVV--TLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRT-EVEQMHK 371 (665)
Q Consensus 296 ~lKL~DFGlA~~~~~~~~~~~~~~~g--T~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~-~~e~l~k 371 (665)
.+||+|||+|+..............+ ...|||||.+.. ..|+.++||||+||+||||++ |..|+++.. ..+.+..
T Consensus 456 ~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~-~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~ 534 (609)
T KOG0200|consen 456 VIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD-RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEF 534 (609)
T ss_pred EEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc-CcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHH
Confidence 99999999999654333222121222 234999999987 789999999999999999987 679998854 3333333
Q ss_pred HHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 372 IFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 372 I~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
+.... ..+.+...++++.+|++.|++.+|++||+..++..
T Consensus 535 l~~G~----------------------------r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 535 LKEGN----------------------------RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HhcCC----------------------------CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 32210 11222356889999999999999999999999874
No 400
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=5.6e-30 Score=304.52 Aligned_cols=204 Identities=20% Similarity=0.243 Sum_probs=147.7
Q ss_pred HhCCC-CCcceeeeeeec------cCCcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCC
Q 006004 212 RKLDH-PNVMKLEGLVTS------RSGSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDI 284 (665)
Q Consensus 212 ~~L~H-pnIV~l~~~~~~------~~~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDL 284 (665)
+.++| .||+.++++|.. ....++++|||++++|...+......+++.+++.|++||+.||+|||++||+||||
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDl 106 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNV 106 (793)
T ss_pred chhhHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence 34455 577778777621 12357888999999888887666667999999999999999999999999999999
Q ss_pred CcccEEEcCCC-------------------cEEEEecccceecCCCCC---------------CCcccccccccccCccc
Q 006004 285 KGSNLLINNAG-------------------VLKIGDFGLATTYDPSQN---------------LPLTSRVVTLWYRAPEL 330 (665)
Q Consensus 285 KPeNILld~~g-------------------~lKL~DFGlA~~~~~~~~---------------~~~~~~~gT~~Y~APE~ 330 (665)
||+||||+..| .+||+|||+++....... ......+||++|||||+
T Consensus 107 KP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 186 (793)
T PLN00181 107 RPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEE 186 (793)
T ss_pred CchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhh
Confidence 99999996544 455666666543211000 00112468999999999
Q ss_pred ccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhcc
Q 006004 331 LLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFR 410 (665)
Q Consensus 331 l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 410 (665)
+.+ ..|+.++|||||||+||||++|.+||.... ..+..+.... .+.. +.
T Consensus 187 ~~~-~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~--~~~~--------------------------~~ 235 (793)
T PLN00181 187 DNG-SSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRV--LPPQ--------------------------IL 235 (793)
T ss_pred hcc-CCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhh--cChh--------------------------hh
Confidence 886 568999999999999999999988875422 1122221100 0000 00
Q ss_pred CCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 411 NFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 411 ~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
.-.+.+.+++.+||.+||.+|||+.|+|+||||...
T Consensus 236 ~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 236 LNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred hcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence 113446789999999999999999999999999753
No 401
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-28 Score=260.84 Aligned_cols=250 Identities=26% Similarity=0.362 Sum_probs=186.0
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHh--CCCCCcceeeeeeeccC---Cc
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRK--LDHPNVMKLEGLVTSRS---GS 232 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~--L~HpnIV~l~~~~~~~~---~~ 232 (665)
.+..+++.||+|.||.||+|++ .|+.||||++... + .+.+.||.+|.+. |+|+||+.+++.-...+ ..
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~sr--d---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ 283 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSR--D---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ 283 (513)
T ss_pred heeEEEEEecCccccceeeccc--cCCceEEEEeccc--c---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence 3789999999999999999998 5789999998632 2 2346678888876 59999999988654332 25
Q ss_pred EEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhC--------CccccCCCcccEEEcCCCcEEEEeccc
Q 006004 233 LYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSR--------GILHRDIKGSNLLINNAGVLKIGDFGL 304 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~--------gIiHrDLKPeNILld~~g~lKL~DFGl 304 (665)
+|||++|.+.+.+.+++.+. .++.....+++..++.||+|||.. .|.|||||..||||.++|..-|+|+||
T Consensus 284 LwLvTdYHe~GSL~DyL~r~-tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGL 362 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNRN-TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 362 (513)
T ss_pred EEEeeecccCCcHHHHHhhc-cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeecee
Confidence 89999999977776666664 799999999999999999999963 499999999999999999999999999
Q ss_pred ceecCCCCC---CCcccccccccccCcccccCCccc-----CcccchhhhHHHHHHHHhC----------CCCCCCCC--
Q 006004 305 ATTYDPSQN---LPLTSRVVTLWYRAPELLLGATKY-----GAAIDMWSAGCILAELFAG----------KPIMPGRT-- 364 (665)
Q Consensus 305 A~~~~~~~~---~~~~~~~gT~~Y~APE~l~~~~~~-----~~~sDIWSLG~iLyeLltG----------~~pF~g~~-- 364 (665)
|.......+ .....++||..|||||+|...... -..+||||||.|+||++.. ++||.+-.
T Consensus 363 Av~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~ 442 (513)
T KOG2052|consen 363 AVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPS 442 (513)
T ss_pred eEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCC
Confidence 998765432 345678999999999998643211 2368999999999999763 36665432
Q ss_pred --hHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCc--HHHHHHHHHhcccCcCCCcCHHHHH
Q 006004 365 --EVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFP--QSALALVDKLLTIEPENRGSAASAL 438 (665)
Q Consensus 365 --~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s--~~a~dLI~~lL~~DP~~RpTa~eaL 438 (665)
..+.+.+++-. ..+.|..| ..+...+ ..+-.|++.|+..||.-|.||-.+.
T Consensus 443 DPs~eeMrkVVCv-----------------~~~RP~ip------nrW~s~~~l~~m~klMkeCW~~Np~aRltALriK 497 (513)
T KOG2052|consen 443 DPSFEEMRKVVCV-----------------QKLRPNIP------NRWKSDPALRVMAKLMKECWYANPAARLTALRIK 497 (513)
T ss_pred CCCHHHHhcceee-----------------cccCCCCC------cccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence 23344433211 00011111 1111111 2355789999999999999987654
No 402
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=2.6e-28 Score=272.03 Aligned_cols=250 Identities=23% Similarity=0.315 Sum_probs=200.4
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCc----EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcE
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGK----IVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSL 233 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~----~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l 233 (665)
...+..++||+|+||+||++.+...|+ +||||++.... ..+....+++|+-+|.+|+|||+++|++++... .+
T Consensus 696 telkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t-~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s--~~ 772 (1177)
T KOG1025|consen 696 TELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT-SPKASIELLDEALRMASLDHPNLLRLLGVCMLS--TL 772 (1177)
T ss_pred hhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC-CchhhHHHHHHHHHHhcCCCchHHHHhhhcccc--hH
Confidence 346677899999999999999987775 68899886543 344556688999999999999999999998764 47
Q ss_pred EEEEEeccc-cchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCC
Q 006004 234 YLVFEYMEH-DLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 234 ~lV~Ey~~g-~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~ 312 (665)
-||++||++ .|++.+...+..+-......|..||++||.|||.++++||||-..|+||..-..+||.|||+|+.+..+.
T Consensus 773 qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 773 QLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 899999995 5666666666678889999999999999999999999999999999999999999999999999887665
Q ss_pred CCCcccc-cccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccc
Q 006004 313 NLPLTSR-VVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSA 390 (665)
Q Consensus 313 ~~~~~~~-~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~ 390 (665)
....... ...+-|||=|.+.. ..|+.++||||+||++||++| |..|+.+....++-. +++.-
T Consensus 853 ~ey~~~~gK~pikwmale~i~~-~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~d-lle~g-------------- 916 (1177)
T KOG1025|consen 853 KEYSAPGGKVPIKWMALESIRI-RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPD-LLEKG-------------- 916 (1177)
T ss_pred ccccccccccCcHHHHHHHhhc-cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhH-HHhcc--------------
Confidence 4332221 22556888898875 789999999999999999987 888888876544332 22210
Q ss_pred cccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 391 HATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 391 ~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
. ....++.-+-++.-++-+|+..|+..||+++++..
T Consensus 917 e-------------RLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 917 E-------------RLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred c-------------cCCCCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 0 01122356778899999999999999999988754
No 403
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.4e-28 Score=242.56 Aligned_cols=245 Identities=24% Similarity=0.350 Sum_probs=186.8
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l~l 235 (665)
.|.|.+.+.||+|.||.+.+|+++.+...+|+|.+.... ...+.|.+|..---.| .|.||+.-|++-....+.+++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~---tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF 99 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ---TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVF 99 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch---hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEE
Confidence 467999999999999999999999999999999987543 3356688888766666 589999888764444557889
Q ss_pred EEEecc-ccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcC--CCcEEEEecccceecCCCC
Q 006004 236 VFEYME-HDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINN--AGVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 236 V~Ey~~-g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~--~g~lKL~DFGlA~~~~~~~ 312 (665)
+|||++ |+|...+...+ +-|.-.+.++.|+++||.|||+.++||||||.+||||-+ ...+||||||+.+..+...
T Consensus 100 ~qE~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV 177 (378)
T KOG1345|consen 100 VQEFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTV 177 (378)
T ss_pred eeccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCcee
Confidence 999998 55655555443 789999999999999999999999999999999999953 3489999999988754322
Q ss_pred CCCcccccccccccCcccccC----CcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhc
Q 006004 313 NLPLTSRVVTLWYRAPELLLG----ATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSK 388 (665)
Q Consensus 313 ~~~~~~~~gT~~Y~APE~l~~----~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~ 388 (665)
. ..--+..|.+||++.. .-...+.+|+|.||||+|.+|+|.+||+..... ...||.-.+
T Consensus 178 ~----~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~-------------d~~Y~~~~~ 240 (378)
T KOG1345|consen 178 K----YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIM-------------DKPYWEWEQ 240 (378)
T ss_pred h----hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhcc-------------CchHHHHHH
Confidence 1 1123667999998752 234578899999999999999999999743211 122333221
Q ss_pred cccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCC
Q 006004 389 SAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENR 431 (665)
Q Consensus 389 ~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~R 431 (665)
...... ..+...|..+++.+..+.++-|..+|.+|
T Consensus 241 w~~rk~--------~~~P~~F~~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 241 WLKRKN--------PALPKKFNPFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred HhcccC--------ccCchhhcccCHHHHHHHHHhcCCccccc
Confidence 111110 12345667899999999999999999988
No 404
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.94 E-value=1.7e-25 Score=228.42 Aligned_cols=263 Identities=35% Similarity=0.515 Sum_probs=206.8
Q ss_pred eeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCH-HHHHHHHHHHHHHHhCCCC-CcceeeeeeeccCCcEEEEE
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDP-ESVRFMAREIHILRKLDHP-NVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~-~~~~~~~~Ei~iL~~L~Hp-nIV~l~~~~~~~~~~l~lV~ 237 (665)
|.+...||.|+|+.||++.+. ..+|+|.+....... .....+.+|+.++..+.|+ +|+++++++.... ..++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~ 77 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEG-SLYLVM 77 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCC-EEEEEE
Confidence 788999999999999999987 789999987654433 2567788999999999988 7999999995543 579999
Q ss_pred EeccccchhhhcCCCC---CCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCC-cEEEEecccceecCCCCC
Q 006004 238 EYMEHDLAGLATTPGI---KFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAG-VLKIGDFGLATTYDPSQN 313 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~---~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g-~lKL~DFGlA~~~~~~~~ 313 (665)
+|+.+..+..+..... .+++..+..++.|++.+|.|+|..|++||||||+|||++..+ .++++|||++..+.....
T Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~ 157 (384)
T COG0515 78 EYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGS 157 (384)
T ss_pred ecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCc
Confidence 9999866664444432 699999999999999999999999999999999999999988 799999999986644332
Q ss_pred C-----CcccccccccccCcccccCC--cccCcccchhhhHHHHHHHHhCCCCCCCCCh---HHHHHHHHHhcCCC-Chh
Q 006004 314 L-----PLTSRVVTLWYRAPELLLGA--TKYGAAIDMWSAGCILAELFAGKPIMPGRTE---VEQMHKIFKLCGSP-SED 382 (665)
Q Consensus 314 ~-----~~~~~~gT~~Y~APE~l~~~--~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~---~e~l~kI~~~~g~p-~~~ 382 (665)
. .....+||..|+|||.+.+. ..+....|+||+|++++++++|..||..... .............+ ...
T Consensus 158 ~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (384)
T COG0515 158 TSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLAS 237 (384)
T ss_pred cccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCccccc
Confidence 1 34667899999999999864 4789999999999999999999999888764 33333333322221 000
Q ss_pred HHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 383 YWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 383 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
...+... ......+.+++..++..+|..|.+..+...++|....
T Consensus 238 --------------~~~~~~~------~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 281 (384)
T COG0515 238 --------------PLSPSNP------ELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL 281 (384)
T ss_pred --------------ccCcccc------chhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence 0000000 1234678899999999999999999999999776643
No 405
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=1.7e-27 Score=272.52 Aligned_cols=264 Identities=26% Similarity=0.373 Sum_probs=202.7
Q ss_pred eEEEEeeccCceEEEEEEECCCCcEEEEEEEec----CCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 161 EKIDKIGQGTYSSVYKARDLETGKIVALKKVRF----ANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 161 ~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~----~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
.....+|.|.+|.|+.+......+.++.|..+. ..........+..|+-+-..|.||||+.....+..... .+-+
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~-~~~~ 399 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDG-ILQS 399 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhccc-chhh
Confidence 456789999999999999888888788876552 22222223337778888899999999888777766543 3444
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC---
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN--- 313 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~--- 313 (665)
||||.+||...+... ..++..++.++++||+.||+|||..||.|||||++|||++.+|.+||+|||.+..+.....
T Consensus 400 mE~~~~Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~ 478 (601)
T KOG0590|consen 400 MEYCPYDLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNI 478 (601)
T ss_pred hhcccHHHHHHHhcc-cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhh
Confidence 999999666666554 4799999999999999999999999999999999999999999999999999988754332
Q ss_pred CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccccc
Q 006004 314 LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHAT 393 (665)
Q Consensus 314 ~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~ 393 (665)
......+|+..|+|||++.+...-...+||||.|++++.|++|+.||.-....+....-.. ...
T Consensus 479 ~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~----------------~~~ 542 (601)
T KOG0590|consen 479 HESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNN----------------YSD 542 (601)
T ss_pred hhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhc----------------ccc
Confidence 3456678999999999998855555679999999999999999999975443322110000 000
Q ss_pred CCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCC
Q 006004 394 SFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTE 446 (665)
Q Consensus 394 ~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~ 446 (665)
.+. ........+..++...+.+|.+||++||.+|.|+++||+.+||+..
T Consensus 543 ~~~----~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i 591 (601)
T KOG0590|consen 543 QRN----IFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI 591 (601)
T ss_pred ccc----cccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence 011 1111223345688899999999999999999999999999999865
No 406
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.94 E-value=1.1e-26 Score=224.75 Aligned_cols=166 Identities=23% Similarity=0.291 Sum_probs=127.6
Q ss_pred ccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCcccccc
Q 006004 242 HDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVV 321 (665)
Q Consensus 242 g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~g 321 (665)
|+|...+...+..|++.+++.++.||+.||.|||+++ ||+|||++.++.+|+ ||++....... ..|
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~------~~g 66 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ------SRV 66 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecccc------CCC
Confidence 3455555555667999999999999999999999998 999999999999999 99998764422 268
Q ss_pred cccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHH-HHHHHHHhcCCCChhHHhhhccccccCCCCCCc
Q 006004 322 TLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVE-QMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQP 400 (665)
Q Consensus 322 T~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e-~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p 400 (665)
|+.|||||++.+ ..|+.++|||||||++|||++|++||....... .+..+....... .+
T Consensus 67 ~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------------------~~ 126 (176)
T smart00750 67 DPYFMAPEVIQG-QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPAD-------------------DP 126 (176)
T ss_pred cccccChHHhcC-CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccC-------------------Cc
Confidence 999999999986 678999999999999999999999997655432 223322211000 00
Q ss_pred chhhhhhhccCCcH--HHHHHHHHhcccCcCCCcCHHHHHhCcCCC
Q 006004 401 YKRKVLETFRNFPQ--SALALVDKLLTIEPENRGSAASALRSEFFK 444 (665)
Q Consensus 401 ~~~~~~~~~~~~s~--~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~ 444 (665)
..+. ....++. .+.+||.+||..||.+|||+.+++.|+|+.
T Consensus 127 ~~~~---~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 127 RDRS---NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred cccc---cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 0000 0112333 689999999999999999999999999975
No 407
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.93 E-value=3.1e-25 Score=239.55 Aligned_cols=165 Identities=23% Similarity=0.248 Sum_probs=131.0
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECC-CCcEEEEEEEecCCC---CHHHHHHHHHHHHHHHhCCCCCcce-eeeeeeccC
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLE-TGKIVALKKVRFANM---DPESVRFMAREIHILRKLDHPNVMK-LEGLVTSRS 230 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~-~g~~vAiK~i~~~~~---~~~~~~~~~~Ei~iL~~L~HpnIV~-l~~~~~~~~ 230 (665)
..+.|.+.+.||+|+||+||+|++.. +++.||||++..... .......+.+|+.+|++|+|+||+. +++.
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----- 90 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----- 90 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc-----
Confidence 34579999999999999999999876 678889998753311 2334567899999999999999985 4432
Q ss_pred CcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCC-CcccEEEcCCCcEEEEecccceecC
Q 006004 231 GSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDI-KGSNLLINNAGVLKIGDFGLATTYD 309 (665)
Q Consensus 231 ~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDL-KPeNILld~~g~lKL~DFGlA~~~~ 309 (665)
+..|||||||.|..+..... .. ...++.|++.+|.|||++||+|||| ||+|||++.++.+||+|||+|+.+.
T Consensus 91 ~~~~LVmE~~~G~~L~~~~~----~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~ 163 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLARP----HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFR 163 (365)
T ss_pred CCcEEEEEccCCCCHHHhCc----cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecc
Confidence 25799999999876653321 11 2578899999999999999999999 9999999999999999999999775
Q ss_pred CCCC-------CCcccccccccccCccccc
Q 006004 310 PSQN-------LPLTSRVVTLWYRAPELLL 332 (665)
Q Consensus 310 ~~~~-------~~~~~~~gT~~Y~APE~l~ 332 (665)
.... ...+..++++.|+|||.+.
T Consensus 164 ~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~ 193 (365)
T PRK09188 164 RRGALYRIAAYEDLRHLLKHKRTYAPDALT 193 (365)
T ss_pred cCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence 4321 1124567889999999885
No 408
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.92 E-value=3.3e-26 Score=252.13 Aligned_cols=243 Identities=28% Similarity=0.416 Sum_probs=201.6
Q ss_pred EeeccCceEEEEEEE---CCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCC-CCCcceeeeeeeccCCcEEEEEEec
Q 006004 165 KIGQGTYSSVYKARD---LETGKIVALKKVRFANMDPESVRFMAREIHILRKLD-HPNVMKLEGLVTSRSGSLYLVFEYM 240 (665)
Q Consensus 165 ~LG~G~fg~Vy~a~~---~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~~l~lV~Ey~ 240 (665)
.+|+|+||.|++++. ...|..||+|++++.............|..++..++ ||.+|+++..|+.+. .+|++++|.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~-kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDG-KLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecccc-chhHhhhhc
Confidence 379999999998763 345778999998766542222224567889999986 999999999999865 799999999
Q ss_pred cccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccccc
Q 006004 241 EHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRV 320 (665)
Q Consensus 241 ~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~ 320 (665)
.|+.+.........+.+..++.|...++.+++++|..||+|||+|++||+++.+|++++.|||+.+..-.... .|
T Consensus 80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~-----~c 154 (612)
T KOG0603|consen 80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI-----AC 154 (612)
T ss_pred ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhh-----cc
Confidence 9876666666666799999999999999999999999999999999999999999999999999987654332 28
Q ss_pred ccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCc
Q 006004 321 VTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQP 400 (665)
Q Consensus 321 gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p 400 (665)
||..|||||++. ....++|+||+|+++|+|++|..||.+ +.+..|.+..-.
T Consensus 155 gt~eymApEI~~---gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~---------------------- 205 (612)
T KOG0603|consen 155 GTYEYRAPEIIN---GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELE---------------------- 205 (612)
T ss_pred cchhhhhhHhhh---ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccC----------------------
Confidence 999999999987 368899999999999999999999988 667777653211
Q ss_pred chhhhhhhccCCcHHHHHHHHHhcccCcCCCcC-----HHHHHhCcCCCCCCCC
Q 006004 401 YKRKVLETFRNFPQSALALVDKLLTIEPENRGS-----AASALRSEFFKTEPLP 449 (665)
Q Consensus 401 ~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpT-----a~eaL~Hp~f~~~~~~ 449 (665)
....++..+.+++..|+..+|.+|.. +.++++|+||....+.
T Consensus 206 -------~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~ 252 (612)
T KOG0603|consen 206 -------MPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWN 252 (612)
T ss_pred -------CchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHh
Confidence 12346778999999999999999975 5899999999876543
No 409
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.91 E-value=1.6e-24 Score=225.94 Aligned_cols=252 Identities=22% Similarity=0.298 Sum_probs=198.5
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCC-----cEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCc
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETG-----KIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGS 232 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g-----~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~ 232 (665)
++++....+-+|+||.||.|.+.+.. +.|-+|.++.. ..+-++..+..|--+|..+.|||+..+.++.......
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~-AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~ 362 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH-ASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYAT 362 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc-ccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCc
Confidence 46888889999999999999776543 34566666532 2345567788999999999999999999987766557
Q ss_pred EEEEEEeccccchhhhcC------C--CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEeccc
Q 006004 233 LYLVFEYMEHDLAGLATT------P--GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGL 304 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~------~--~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGl 304 (665)
.++++.+++-+.+..+++ . ...++..++..++.||+.|++|||..||||.||-..|.+||+.-.+||+|=.+
T Consensus 363 P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaL 442 (563)
T KOG1024|consen 363 PFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSAL 442 (563)
T ss_pred ceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchh
Confidence 788899988444333322 1 13477889999999999999999999999999999999999999999999999
Q ss_pred ceecCCCCCCCcc-cccccccccCcccccCCcccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCChh
Q 006004 305 ATTYDPSQNLPLT-SRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSPSED 382 (665)
Q Consensus 305 A~~~~~~~~~~~~-~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p~~~ 382 (665)
++.+-+....-+. .......||+||.+.+ ..|+.++|+||||++||||+| |+.|+...++.|..+-+.+..
T Consensus 443 SRDLFP~DYhcLGDnEnRPvkWMslEal~n-~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGy------ 515 (563)
T KOG1024|consen 443 SRDLFPGDYHCLGDNENRPVKWMSLEALQN-SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGY------ 515 (563)
T ss_pred ccccCcccccccCCCCCCcccccCHHHHhh-hhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccc------
Confidence 9876544322111 1122567999999987 789999999999999999976 889999988888777664421
Q ss_pred HHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHh
Q 006004 383 YWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALR 439 (665)
Q Consensus 383 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~ 439 (665)
.-.+| -+.|+++..++..|+..+|++||+.+|+..
T Consensus 516 -------------RlaQP---------~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 516 -------------RLAQP---------FNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred -------------eecCC---------CCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 11122 368999999999999999999999999864
No 410
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=1.7e-22 Score=215.97 Aligned_cols=210 Identities=27% Similarity=0.315 Sum_probs=168.1
Q ss_pred CeeEEEEeeccCceEEEEEEECCCC-cEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCC----CCcceeeeeeeccCCcE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETG-KIVALKKVRFANMDPESVRFMAREIHILRKLDH----PNVMKLEGLVTSRSGSL 233 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g-~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~H----pnIV~l~~~~~~~~~~l 233 (665)
+|.+.++||+|+||.||+|.+..++ ..+|+|........... .+..|+.+|..+.. +++..+++........-
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~--~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS--VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc--cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence 6999999999999999999998775 67899987654321111 46779999998863 68889988874233467
Q ss_pred EEEEEeccccchhhhcCC-CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCC-----CcEEEEecccce-
Q 006004 234 YLVFEYMEHDLAGLATTP-GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNA-----GVLKIGDFGLAT- 306 (665)
Q Consensus 234 ~lV~Ey~~g~ll~~~~~~-~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~-----g~lKL~DFGlA~- 306 (665)
||||+++..+|.++.... ...|+...+..++.|++.+|.+||+.|++||||||+|+++... ..+.|.|||+|+
T Consensus 97 ~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~ 176 (322)
T KOG1164|consen 97 FIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR 176 (322)
T ss_pred EEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence 999999999888877544 3789999999999999999999999999999999999999865 469999999999
Q ss_pred -ecCCCCC---C---C-cccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHH
Q 006004 307 -TYDPSQN---L---P-LTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHK 371 (665)
Q Consensus 307 -~~~~~~~---~---~-~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~k 371 (665)
.+..... . . ...+.||..|.++.+..+ ...+.+.|+||++-++.+|+.|..||.+........+
T Consensus 177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~-~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~ 248 (322)
T KOG1164|consen 177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLG-IEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSK 248 (322)
T ss_pred ccccCCCCcccccCCCCccCCCCccccccHHHhCC-CccCCchhhhhHHHHHHHHhcCCCCCccccccchHHH
Confidence 3322211 1 1 123569999999998887 6679999999999999999999999977664443333
No 411
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.90 E-value=5.3e-24 Score=244.43 Aligned_cols=226 Identities=32% Similarity=0.436 Sum_probs=172.5
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEE
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~l 235 (665)
...+|+.++.|-.|+||-||+++|+.+.+.+|+| +++.++ +.|- ||.....|.+|
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l-------ilRn--ilt~a~npfvv--------------- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-------ILRN--ILTFAGNPFVV--------------- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhc-ccccch-------hhhc--cccccCCccee---------------
Confidence 3467999999999999999999999999999994 443321 1111 34434444444
Q ss_pred EEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCC--
Q 006004 236 VFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQN-- 313 (665)
Q Consensus 236 V~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~-- 313 (665)
||-..++...+ +++.+. +.+++|||..||+|||+||+|+||+.-|++|+.|||+.........
T Consensus 136 ------gDc~tllk~~g-~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 ------GDCATLLKNIG-PLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred ------chhhhhcccCC-CCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 33333333322 454433 7899999999999999999999999999999999999865321110
Q ss_pred ------------CCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCh
Q 006004 314 ------------LPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSE 381 (665)
Q Consensus 314 ------------~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~ 381 (665)
..-...+|||.|+|||+++. ..|+..+|+|++|+|+||+|.|..||.|++..+.+...+......++
T Consensus 201 l~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr-qgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE 279 (1205)
T KOG0606|consen 201 LKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE 279 (1205)
T ss_pred hhhcchHHHHHHhhhccccCCccccChhhhhh-hccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccc
Confidence 01123489999999999987 67999999999999999999999999999999988887664332222
Q ss_pred hHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCC---cCHHHHHhCcCCCCCCC
Q 006004 382 DYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENR---GSAASALRSEFFKTEPL 448 (665)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~R---pTa~eaL~Hp~f~~~~~ 448 (665)
. -..+++++++||.+||..+|..| +.+.++.+|+||+...+
T Consensus 280 ~--------------------------dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw 323 (1205)
T KOG0606|consen 280 E--------------------------DEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDW 323 (1205)
T ss_pred c--------------------------CcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeeccc
Confidence 1 23588999999999999999999 45888999999986544
No 412
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.88 E-value=1.5e-22 Score=200.53 Aligned_cols=141 Identities=20% Similarity=0.240 Sum_probs=109.7
Q ss_pred EEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHH------------------------HHHHHHHHHHHHhCCCCC
Q 006004 163 IDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPES------------------------VRFMAREIHILRKLDHPN 218 (665)
Q Consensus 163 ~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~------------------------~~~~~~Ei~iL~~L~Hpn 218 (665)
...||+|+||.||+|.+. +|+.||||+++........ .....+|+.+|.+|.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 367999999999999986 8999999999764321110 122345999999998887
Q ss_pred cceeeeeeeccCCcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHH-HhCCccccCCCcccEEEcCCCcE
Q 006004 219 VMKLEGLVTSRSGSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHC-HSRGILHRDIKGSNLLINNAGVL 297 (665)
Q Consensus 219 IV~l~~~~~~~~~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~L-H~~gIiHrDLKPeNILld~~g~l 297 (665)
+.....+.. .. .+|||||++|+.+.........+++.++..++.||+.+|.+| |+.||+||||||+|||++ ++.+
T Consensus 81 v~~p~~~~~-~~--~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v 156 (190)
T cd05147 81 IPCPEPILL-KS--HVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKL 156 (190)
T ss_pred CCCCcEEEe-cC--CEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcE
Confidence 744333222 22 389999999865543322335799999999999999999999 799999999999999998 4789
Q ss_pred EEEecccceec
Q 006004 298 KIGDFGLATTY 308 (665)
Q Consensus 298 KL~DFGlA~~~ 308 (665)
+|+|||+|...
T Consensus 157 ~LiDFG~a~~~ 167 (190)
T cd05147 157 YIIDVSQSVEH 167 (190)
T ss_pred EEEEccccccC
Confidence 99999999764
No 413
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.87 E-value=7.4e-22 Score=199.98 Aligned_cols=172 Identities=14% Similarity=0.124 Sum_probs=132.9
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCC-HHHHHH------HHHHHHHHHhCCCCCcceeeeeeecc-
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMD-PESVRF------MAREIHILRKLDHPNVMKLEGLVTSR- 229 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~-~~~~~~------~~~Ei~iL~~L~HpnIV~l~~~~~~~- 229 (665)
++|++++.||.|+||.||++.+ ++..+|||+++..... +..... +.+|+..+.+|.|++|..+.+++...
T Consensus 31 ~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 31 YNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred CceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 4899999999999999999755 4668999999755432 222233 57899999999999999999886643
Q ss_pred ------CCcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecc
Q 006004 230 ------SGSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFG 303 (665)
Q Consensus 230 ------~~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFG 303 (665)
.+..+|||||++|..+..+. .+++ ..+.+|+.+|..||+.||+|+||||+|||++.+| ++|+|||
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg 179 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLS 179 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECC
Confidence 23579999999997665442 2333 3466999999999999999999999999999999 9999999
Q ss_pred cceecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHH
Q 006004 304 LATTYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELF 354 (665)
Q Consensus 304 lA~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLl 354 (665)
............ .+++ ...|+.++|+||||+++..+.
T Consensus 180 ~~~~~~e~~a~d-------------~~vl-er~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 180 GKRCTAQRKAKD-------------RIDL-ERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CcccccchhhHH-------------HHHH-HhHhcccccccceeEeehHHH
Confidence 887653222110 0233 356788999999999987654
No 414
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=1.8e-21 Score=192.57 Aligned_cols=208 Identities=24% Similarity=0.305 Sum_probs=166.8
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCC-CCcceeeeeeeccCCcEEE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDH-PNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~H-pnIV~l~~~~~~~~~~l~l 235 (665)
...|.++++||.|+||.+|++....+|+.||||+-+..... ..+..|..+.+.|.+ ..|..+..+...+. .-.+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h----pqL~yEskvY~iL~~g~GiP~i~~y~~e~~-ynvl 88 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH----PQLLYESKVYRILQGGVGIPHIRHYGTEKD-YNVL 88 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC----cchhHHHHHHHHhccCCCCchhhhhccccc-ccee
Confidence 45899999999999999999999999999999986533222 235678899998864 56666666665544 6689
Q ss_pred EEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCC---CcEEEEecccceecCCCC
Q 006004 236 VFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNA---GVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 236 V~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~---g~lKL~DFGlA~~~~~~~ 312 (665)
||+++...|.+++.--...|+...+.-++-|++.-|+|+|.+++|||||||+|+|+.-. ..+.|+|||||..+....
T Consensus 89 VMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~ 168 (341)
T KOG1163|consen 89 VMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIR 168 (341)
T ss_pred eeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcccc
Confidence 99999988777766656679999999999999999999999999999999999998643 469999999998874432
Q ss_pred CC------CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHH
Q 006004 313 NL------PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMH 370 (665)
Q Consensus 313 ~~------~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~ 370 (665)
.. .-....||..|.+--...+ ...+...|+=|+|-+|..+..|..||+|.......+
T Consensus 169 t~~HIpyre~r~ltGTaRYASinAh~g-~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~Q 231 (341)
T KOG1163|consen 169 TRQHIPYREDRNLTGTARYASINAHLG-IEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQ 231 (341)
T ss_pred ccccCccccCCccceeeeehhhhhhhh-hhhhhhhhhhhhcceeeeeecCCCcccccchhhHHH
Confidence 21 1234578999988776665 445788999999999999999999999876544433
No 415
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.86 E-value=1.4e-21 Score=193.30 Aligned_cols=141 Identities=22% Similarity=0.319 Sum_probs=112.5
Q ss_pred EEEeeccCceEEEEEEECCCCcEEEEEEEecCCCC----------------------HH--HHHHHHHHHHHHHhCCCCC
Q 006004 163 IDKIGQGTYSSVYKARDLETGKIVALKKVRFANMD----------------------PE--SVRFMAREIHILRKLDHPN 218 (665)
Q Consensus 163 ~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~----------------------~~--~~~~~~~Ei~iL~~L~Hpn 218 (665)
.+.||+|+||.||+|++. +|+.||||+++..... .. ....+.+|...+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 468999999999999987 8999999999864211 00 0123468999999999998
Q ss_pred cceeeeeeeccCCcEEEEEEeccccch-hhhcCCCCCCChhHHHHHHHHHHHHHHHHHh-CCccccCCCcccEEEcCCCc
Q 006004 219 VMKLEGLVTSRSGSLYLVFEYMEHDLA-GLATTPGIKFTEPQIKCYMQQLLRGLEHCHS-RGILHRDIKGSNLLINNAGV 296 (665)
Q Consensus 219 IV~l~~~~~~~~~~l~lV~Ey~~g~ll-~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~-~gIiHrDLKPeNILld~~g~ 296 (665)
|.....+... ..||||||++|..+ ..... ...+++.++..++.|++.+|.+||. .||+||||||+|||++ ++.
T Consensus 81 i~~p~~~~~~---~~~lVmE~~~g~~~~~~~l~-~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~ 155 (190)
T cd05145 81 VPVPEPILLK---KNVLVMEFIGDDGSPAPRLK-DVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGK 155 (190)
T ss_pred CCCceEEEec---CCEEEEEEecCCCchhhhhh-hccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCC
Confidence 8655544332 24899999998633 22222 3468889999999999999999999 9999999999999999 799
Q ss_pred EEEEecccceecC
Q 006004 297 LKIGDFGLATTYD 309 (665)
Q Consensus 297 lKL~DFGlA~~~~ 309 (665)
++|+|||+|....
T Consensus 156 ~~liDFG~a~~~~ 168 (190)
T cd05145 156 PYIIDVSQAVELD 168 (190)
T ss_pred EEEEEcccceecC
Confidence 9999999998764
No 416
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.86 E-value=1.6e-21 Score=203.15 Aligned_cols=236 Identities=22% Similarity=0.322 Sum_probs=151.9
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCC----------CCcceeeeeee
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDH----------PNVMKLEGLVT 227 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~H----------pnIV~l~~~~~ 227 (665)
.+...+.||.|+++.||.++|.+||+.+|||+...... ....++.+.+|.-....+.+ -.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 47788899999999999999999999999999866543 23356677777655544322 12222222111
Q ss_pred ---------ccC--C-----cEEEEEEeccccchhhhc---C-CCC--CCChhHHHHHHHHHHHHHHHHHhCCccccCCC
Q 006004 228 ---------SRS--G-----SLYLVFEYMEHDLAGLAT---T-PGI--KFTEPQIKCYMQQLLRGLEHCHSRGILHRDIK 285 (665)
Q Consensus 228 ---------~~~--~-----~l~lV~Ey~~g~ll~~~~---~-~~~--~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLK 285 (665)
... . +.+++|+-+.++|...+. . ... .+.......+..|++..+++||..||+|+||+
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~ 172 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK 172 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence 110 0 347788888887765433 1 111 12222334455899999999999999999999
Q ss_pred cccEEEcCCCcEEEEecccceecCCCCCCCcccccccccccCcccccCC-------cccCcccchhhhHHHHHHHHhCCC
Q 006004 286 GSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVVTLWYRAPELLLGA-------TKYGAAIDMWSAGCILAELFAGKP 358 (665)
Q Consensus 286 PeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~gT~~Y~APE~l~~~-------~~~~~~sDIWSLG~iLyeLltG~~ 358 (665)
|+|+|++.+|.++|+||+.....+... .....+..|.+||+.... ..++.+.|.|+||+++|.|++|..
T Consensus 173 ~~nfll~~~G~v~Lg~F~~~~r~g~~~----~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~l 248 (288)
T PF14531_consen 173 PENFLLDQDGGVFLGDFSSLVRAGTRY----RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRL 248 (288)
T ss_dssp GGGEEE-TTS-EEE--GGGEEETTEEE----EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-
T ss_pred eeeEEEcCCCCEEEcChHHHeecCcee----eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccC
Confidence 999999999999999999887654321 113446789999976431 357889999999999999999999
Q ss_pred CCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCC
Q 006004 359 IMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENR 431 (665)
Q Consensus 359 pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~R 431 (665)
||......... .. ......++|+.++.||..||..||.+|
T Consensus 249 Pf~~~~~~~~~----------------------------~~-----~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 249 PFGLSSPEADP----------------------------EW-----DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp STCCCGGGSTS----------------------------GG-----GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCCccccc----------------------------cc-----cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 99765321000 00 112223789999999999999999988
No 417
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=1.9e-21 Score=199.83 Aligned_cols=208 Identities=22% Similarity=0.306 Sum_probs=171.4
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCcEEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
.|++.++||+|+||+++.+.+.-+++.||||.=.... ..-.+..|....+.| ..+.|..+|.+-.... +-.|||
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS----~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~-~NiLVi 103 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGK-YNILVI 103 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccC----CcchHHHHHHHHHHHcCCCCCCceeeeccccc-hhhhhh
Confidence 6999999999999999999999999999999754322 233466788888888 5788888877544432 457999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCC-----CcEEEEecccceecCCCC
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNA-----GVLKIGDFGLATTYDPSQ 312 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~-----g~lKL~DFGlA~~~~~~~ 312 (665)
|++..+|.+++.--+..|+...+.-++.|++.-++|+|++.+|+|||||+|+||... ..+.|+|||+|+.+....
T Consensus 104 dLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~ 183 (449)
T KOG1165|consen 104 DLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK 183 (449)
T ss_pred hhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence 999988877777677789999999999999999999999999999999999999754 469999999999875433
Q ss_pred CC------CcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCC---ChHHHHHHH
Q 006004 313 NL------PLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGR---TEVEQMHKI 372 (665)
Q Consensus 313 ~~------~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~---~~~e~l~kI 372 (665)
.. ...+..||..||+=-..+| ...+..-|+=|||-+++++|.|..||+|. +..+.+++|
T Consensus 184 TkqHIPYrE~KSLsGTARYMSINTHlG-rEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKI 251 (449)
T KOG1165|consen 184 TKQHIPYREHKSLSGTARYMSINTHLG-REQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKI 251 (449)
T ss_pred ccccCccccccccccceeeeEeecccc-chhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHh
Confidence 22 2345579999999888887 56789999999999999999999999875 445555555
No 418
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.85 E-value=5.9e-22 Score=227.71 Aligned_cols=249 Identities=26% Similarity=0.386 Sum_probs=180.1
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecC--CCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFA--NMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~--~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV 236 (665)
.|...+.||.+.|=+|.+|++.+ |. |+||++-+. .+.-....+...|++ ...++|||++.+.-+..... ..|||
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~k-AAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDK-AAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhH-HHHHH
Confidence 58889999999999999999754 54 899987433 233333334445666 66679999999877655433 56899
Q ss_pred EEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceec--CCCCCC
Q 006004 237 FEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTY--DPSQNL 314 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~--~~~~~~ 314 (665)
-+|+.++|.+.+..+- .|.+-+-+.|+.||+.||.-||..||+|+|||.+||||+.-+.+.|+||..-+.. ..++..
T Consensus 100 RqyvkhnLyDRlSTRP-FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPa 178 (1431)
T KOG1240|consen 100 RQYVKHNLYDRLSTRP-FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPA 178 (1431)
T ss_pred HHHHhhhhhhhhccch-HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcc
Confidence 9999999988776543 5888899999999999999999999999999999999999999999999876432 222222
Q ss_pred Ccccccc----cccccCcccccCCc----------ccCcccchhhhHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCC
Q 006004 315 PLTSRVV----TLWYRAPELLLGAT----------KYGAAIDMWSAGCILAELFA-GKPIMPGRTEVEQMHKIFKLCGSP 379 (665)
Q Consensus 315 ~~~~~~g----T~~Y~APE~l~~~~----------~~~~~sDIWSLG~iLyeLlt-G~~pF~g~~~~e~l~kI~~~~g~p 379 (665)
..+-+.. -..|+|||-+.... ..+++.||||+||+++||++ |+|||.- -|+-+..... ..
T Consensus 179 df~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L----SQL~aYr~~~-~~ 253 (1431)
T KOG1240|consen 179 DFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL----SQLLAYRSGN-AD 253 (1431)
T ss_pred cceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH----HHHHhHhccC-cc
Confidence 2222222 34599999885311 25788999999999999965 7899832 1221111100 00
Q ss_pred ChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 380 SEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
.. ..+.+... +...+.||..|++.||.+|.+|++.|+-
T Consensus 254 ~~---------------------e~~Le~Ie--d~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 254 DP---------------------EQLLEKIE--DVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred CH---------------------HHHHHhCc--CccHHHHHHHHHccCchhccCHHHHHHh
Confidence 00 11112222 2368999999999999999999999985
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.84 E-value=1.7e-20 Score=186.91 Aligned_cols=190 Identities=17% Similarity=0.148 Sum_probs=141.5
Q ss_pred eEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHH--HHHHHHHHHHHHHhCC-CCCcceeeeeeeccCCcEEEEE
Q 006004 161 EKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPE--SVRFMAREIHILRKLD-HPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 161 ~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~--~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
.+...|++|+||+||.+.. .+..++.+.+........ ....+.+|+++|++|. |++|++++++ + ..|++|
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~-~~~lvm 77 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----D-GRHLDR 77 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----c-CEEEEE
Confidence 4567899999999998765 677888777764433111 2235789999999995 5889999885 2 469999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCC-CcccEEEcCCCcEEEEecccceecCCCCCC--
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDI-KGSNLLINNAGVLKIGDFGLATTYDPSQNL-- 314 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDL-KPeNILld~~g~lKL~DFGlA~~~~~~~~~-- 314 (665)
||+.|..+..... .. ...++.|++.+|.+||++||+|||| ||+|||++.+|.++|+|||+|.........
T Consensus 78 eyI~G~~L~~~~~------~~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r 150 (218)
T PRK12274 78 SYLAGAAMYQRPP------RG-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMR 150 (218)
T ss_pred eeecCccHHhhhh------hh-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHH
Confidence 9999977643321 11 2457899999999999999999999 799999999999999999999865433210
Q ss_pred --C--------cccccccccccCcccccCCcccC-cccchhhhHHHHHHHHhCCCCCCCCC
Q 006004 315 --P--------LTSRVVTLWYRAPELLLGATKYG-AAIDMWSAGCILAELFAGKPIMPGRT 364 (665)
Q Consensus 315 --~--------~~~~~gT~~Y~APE~l~~~~~~~-~~sDIWSLG~iLyeLltG~~pF~g~~ 364 (665)
. ..-...++.|+.|+.-.--...+ ...++++.|+-+|.++|+..++.+.+
T Consensus 151 ~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 151 LLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 0 00113478888888653222233 66788899999999999998876654
No 420
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.83 E-value=9.1e-21 Score=198.50 Aligned_cols=256 Identities=26% Similarity=0.357 Sum_probs=174.7
Q ss_pred CCCCCeeEEEEeeccCceEEEEEEECCCC-----------------------------------cEEEEEEEec-C--CC
Q 006004 155 RRADAFEKIDKIGQGTYSSVYKARDLETG-----------------------------------KIVALKKVRF-A--NM 196 (665)
Q Consensus 155 ~~~~~y~~~~~LG~G~fg~Vy~a~~~~~g-----------------------------------~~vAiK~i~~-~--~~ 196 (665)
.+.++|++...||+|.-+.||.|+...+| -+.|||.+-. + ..
T Consensus 154 FtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s~ 233 (598)
T KOG4158|consen 154 FTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDSG 233 (598)
T ss_pred cchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCCc
Confidence 34678999999999999999998754321 1356665421 1 11
Q ss_pred CHHHHHHHHHHHH------H--------HHh--------CCCCCcceeeeeeecc-------------------------
Q 006004 197 DPESVRFMAREIH------I--------LRK--------LDHPNVMKLEGLVTSR------------------------- 229 (665)
Q Consensus 197 ~~~~~~~~~~Ei~------i--------L~~--------L~HpnIV~l~~~~~~~------------------------- 229 (665)
....++.+.+|.- . .+. -+|||||++..+|.+.
T Consensus 234 ~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g 313 (598)
T KOG4158|consen 234 DAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAG 313 (598)
T ss_pred hHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccC
Confidence 2223344444431 0 111 2599999998877432
Q ss_pred -CCcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEc--CCC--cEEEEeccc
Q 006004 230 -SGSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLIN--NAG--VLKIGDFGL 304 (665)
Q Consensus 230 -~~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld--~~g--~lKL~DFGl 304 (665)
...+|+||.-....|..++-.+. .+.....-++.|+++|+.|||.+||.|||||.+||||. +++ .+.|+|||.
T Consensus 314 ~~~tlylvMkrY~~tLr~yl~~~~--~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGC 391 (598)
T KOG4158|consen 314 EPKTLYLVMKRYRQTLREYLWTRH--RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGC 391 (598)
T ss_pred CCceEEEehhcchhhHHHHHhcCC--CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccce
Confidence 23589999988888777665543 56777888999999999999999999999999999984 333 689999997
Q ss_pred ceecCCC-CCCC----cccccccccccCcccccCCcc-----cCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 006004 305 ATTYDPS-QNLP----LTSRVVTLWYRAPELLLGATK-----YGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFK 374 (665)
Q Consensus 305 A~~~~~~-~~~~----~~~~~gT~~Y~APE~l~~~~~-----~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~ 374 (665)
+-.-+.. -..+ ....-|.-..||||+...-.. --.++|.|+.|.+.||+++...||.+..+...-..-++
T Consensus 392 cLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yq 471 (598)
T KOG4158|consen 392 CLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQ 471 (598)
T ss_pred eeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhh
Confidence 6542210 0111 223346777899998753211 12478999999999999999999988543221111111
Q ss_pred hcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCH---HHHHh
Q 006004 375 LCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSA---ASALR 439 (665)
Q Consensus 375 ~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa---~eaL~ 439 (665)
.. .+......+++.+++||..+|..||.+|+++ +.+|+
T Consensus 472 -----------e~----------------qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 472 -----------ES----------------QLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred -----------hh----------------hCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 00 1122334689999999999999999999984 44554
No 421
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.83 E-value=1.4e-21 Score=212.09 Aligned_cols=176 Identities=30% Similarity=0.486 Sum_probs=131.6
Q ss_pred EEEEEEeccccchhhhcCC---CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecC
Q 006004 233 LYLVFEYMEHDLAGLATTP---GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYD 309 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~~---~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~ 309 (665)
+||.|++|.-+.+..++.+ ....+......++.|+..|++| +|.+|||+||.||++..+..+||+|||+.....
T Consensus 331 lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~ 407 (516)
T KOG1033|consen 331 LYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQD 407 (516)
T ss_pred hhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeecc
Confidence 6777777776656555532 2345667888999999999999 999999999999999999999999999998775
Q ss_pred CCC-----CCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHh-cCCCChhH
Q 006004 310 PSQ-----NLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKL-CGSPSEDY 383 (665)
Q Consensus 310 ~~~-----~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~-~g~p~~~~ 383 (665)
... ....+..+||++||+||.|.+ ..|+.++||||||+|||||+.- | .+..+.+.....+ -|..++++
T Consensus 408 ~~~~~~~~~a~~t~~~gt~~YmsPEQi~g-~~y~~kvdIyaLGlil~EL~~~---f--~T~~er~~t~~d~r~g~ip~~~ 481 (516)
T KOG1033|consen 408 KDETVAPAAASHTQQVGTLLYMSPEQIRG-QQYSEKVDIYALGLILAELLIQ---F--STQFERIATLTDIRDGIIPPEF 481 (516)
T ss_pred cCCcccchhhhhhhcccccccCCHHHHhh-hhhhhhcchhhHHHHHHHHHHH---h--ccHHHHHHhhhhhhcCCCChHH
Confidence 444 234667799999999999997 7899999999999999999971 1 1222222222111 12233333
Q ss_pred HhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 384 WRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 384 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
|. + .+...+|+..||.+.|.+||++.+.-.|+|.
T Consensus 482 ~~-------------------------d-~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 482 LQ-------------------------D-YPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred hh-------------------------c-CcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 22 1 2345689999999999999988887777764
No 422
>smart00090 RIO RIO-like kinase.
Probab=99.80 E-value=2.2e-19 Score=184.09 Aligned_cols=145 Identities=22% Similarity=0.242 Sum_probs=113.9
Q ss_pred CeeEEEEeeccCceEEEEEE-ECCCCcEEEEEEEecCCCC--------------------HH--HHHHHHHHHHHHHhCC
Q 006004 159 AFEKIDKIGQGTYSSVYKAR-DLETGKIVALKKVRFANMD--------------------PE--SVRFMAREIHILRKLD 215 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~-~~~~g~~vAiK~i~~~~~~--------------------~~--~~~~~~~Ei~iL~~L~ 215 (665)
-|.+.+.||+|+||.||+|. +..+|+.||||+++..... .. ....+.+|+.+++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999999 7789999999999754311 00 1124578999999997
Q ss_pred CCC--cceeeeeeeccCCcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCC-ccccCCCcccEEEc
Q 006004 216 HPN--VMKLEGLVTSRSGSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRG-ILHRDIKGSNLLIN 292 (665)
Q Consensus 216 Hpn--IV~l~~~~~~~~~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~g-IiHrDLKPeNILld 292 (665)
+.. +.+++. .. ..||||||++|+.+.........+.+.++..++.||+.+|.+||..| |+||||||+|||++
T Consensus 109 ~~~i~~p~~~~---~~--~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~ 183 (237)
T smart00090 109 EAGVPVPKPIA---WR--RNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH 183 (237)
T ss_pred hcCCCCCeeeE---ec--CceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE
Confidence 533 333443 22 34899999999765444333345777788899999999999999999 99999999999999
Q ss_pred CCCcEEEEecccceecC
Q 006004 293 NAGVLKIGDFGLATTYD 309 (665)
Q Consensus 293 ~~g~lKL~DFGlA~~~~ 309 (665)
++.++|+|||+|....
T Consensus 184 -~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 184 -DGKVVIIDVSQSVELD 199 (237)
T ss_pred -CCCEEEEEChhhhccC
Confidence 8899999999987643
No 423
>PRK10345 hypothetical protein; Provisional
Probab=99.80 E-value=4.8e-19 Score=178.06 Aligned_cols=137 Identities=18% Similarity=0.225 Sum_probs=105.0
Q ss_pred eEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-----CCCCcceeeeeeeccC--CcE
Q 006004 161 EKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKL-----DHPNVMKLEGLVTSRS--GSL 233 (665)
Q Consensus 161 ~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-----~HpnIV~l~~~~~~~~--~~l 233 (665)
.-.+.||+|+|+.||. +..++.. +||++..... ...+.+.+|+.+++.| +||||+++++++++.. +.+
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~--~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v 79 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD--GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV 79 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEecccc--chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence 3457899999999995 7777765 7999876432 2345688999999999 6799999999998864 343
Q ss_pred E-EEEEecc--ccchhhhcCCCCCCChhHHHHHHHHHHHHH-HHHHhCCccccCCCcccEEEcCC----CcEEEEecccc
Q 006004 234 Y-LVFEYME--HDLAGLATTPGIKFTEPQIKCYMQQLLRGL-EHCHSRGILHRDIKGSNLLINNA----GVLKIGDFGLA 305 (665)
Q Consensus 234 ~-lV~Ey~~--g~ll~~~~~~~~~lse~~i~~i~~QIl~aL-~~LH~~gIiHrDLKPeNILld~~----g~lKL~DFGlA 305 (665)
+ +||||+. ++.+..+.... .+++. ..++.|++.++ +|||+++|+||||||+|||++.. +.++|+||+.+
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred EEEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 4 7899944 54444444443 46666 46788888888 99999999999999999999743 37999995443
No 424
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=3e-20 Score=212.96 Aligned_cols=262 Identities=27% Similarity=0.404 Sum_probs=206.5
Q ss_pred CeeEEEEeeccCceEEEEEEECCC-CcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCC-CCCcceeeeeeeccCCcEEEE
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLET-GKIVALKKVRFANMDPESVRFMAREIHILRKLD-HPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~-g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~~l~lV 236 (665)
.|.+.+.||+|+|+.|-++....+ ...+|+|.+............+..|..+-+.+. |+|++.+++...... ..+++
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~-~~~~~ 99 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPR-SYLLS 99 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCc-ccccc
Confidence 688899999999999999886443 346777777654434455566777999999997 999999999877654 67899
Q ss_pred EEeccccchhhhc-CCCC-CCChhHHHHHHHHHHHHHHHHH-hCCccccCCCcccEEEcCCC-cEEEEecccceecCC--
Q 006004 237 FEYMEHDLAGLAT-TPGI-KFTEPQIKCYMQQLLRGLEHCH-SRGILHRDIKGSNLLINNAG-VLKIGDFGLATTYDP-- 310 (665)
Q Consensus 237 ~Ey~~g~ll~~~~-~~~~-~lse~~i~~i~~QIl~aL~~LH-~~gIiHrDLKPeNILld~~g-~lKL~DFGlA~~~~~-- 310 (665)
++|..|+.+.... .... ..+...+..++.|+..+|.|+| ..++.||||||+|.+++..+ .+|++|||+|..+..
T Consensus 100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~ 179 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKN 179 (601)
T ss_pred cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccccC
Confidence 9998875554444 4443 6788899999999999999999 99999999999999999999 999999999998765
Q ss_pred CCCCCcccccc-cccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcc
Q 006004 311 SQNLPLTSRVV-TLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKS 389 (665)
Q Consensus 311 ~~~~~~~~~~g-T~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~ 389 (665)
+........+| ++.|+|||...+....+...|+||+|+++..|++|..|+......+... ..|...+
T Consensus 180 g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~-----------~~~~~~~- 247 (601)
T KOG0590|consen 180 GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY-----------SSWKSNK- 247 (601)
T ss_pred CcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccc-----------eeecccc-
Confidence 33334455688 9999999999876677899999999999999999998876544322100 0111110
Q ss_pred ccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCC
Q 006004 390 AHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKT 445 (665)
Q Consensus 390 ~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~ 445 (665)
...-...+..++..+.+++.++|..+|..|.+..++-.++|+..
T Consensus 248 ------------~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 248 ------------GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred ------------cccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 00012334578899999999999999999999999999999987
No 425
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.75 E-value=6.5e-18 Score=168.59 Aligned_cols=137 Identities=20% Similarity=0.233 Sum_probs=109.7
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHH------HHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEE
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPE------SVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVF 237 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~------~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~ 237 (665)
+.||+|++|.||+|++ +|..+++|+......... ....+.+|+.++..+.|++|.....++.... ..++||
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~-~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPE-NFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCC-CCEEEE
Confidence 5799999999999987 677899998654332111 1235778999999999999877666655443 578999
Q ss_pred EeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceec
Q 006004 238 EYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTY 308 (665)
Q Consensus 238 Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~ 308 (665)
||++|..+..+.... .. +...++.+|+.+|.+||..|++|+|++|.|||++ ++.++|+|||++...
T Consensus 79 e~~~G~~L~~~~~~~---~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~ 144 (211)
T PRK14879 79 EYIEGEPLKDLINSN---GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEFS 144 (211)
T ss_pred EEeCCcCHHHHHHhc---cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccCC
Confidence 999986665554332 12 7889999999999999999999999999999999 789999999998763
No 426
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75 E-value=4.3e-18 Score=199.68 Aligned_cols=194 Identities=25% Similarity=0.323 Sum_probs=151.8
Q ss_pred CCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCC---CCCcceeeeeeeccCCcE
Q 006004 157 ADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLD---HPNVMKLEGLVTSRSGSL 233 (665)
Q Consensus 157 ~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~---HpnIV~l~~~~~~~~~~l 233 (665)
.+.|.|-+.||+|+||+||+|.+.. |+.||||+=+..+..+-.+ =.+++.+|+ -+-|+.+..++.-.+ .-
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI-----~~q~~~RLk~~~~~~~~~~~~a~~~~~-~S 769 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYI-----CLQVMERLKPQMLPSIMHISSAHVFQN-AS 769 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeee-----hHHHHHhhchhhhcchHHHHHHHccCC-cc
Confidence 4569999999999999999999876 9999999877655332111 124455555 234455555444434 34
Q ss_pred EEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcC-------CCcEEEEecccce
Q 006004 234 YLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINN-------AGVLKIGDFGLAT 306 (665)
Q Consensus 234 ~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~-------~g~lKL~DFGlA~ 306 (665)
+||+||.+.+.+..+....+-+++..+..+..|||..|++||..+|||+||||+|+||.. .--++|+|||-+.
T Consensus 770 ~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si 849 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI 849 (974)
T ss_pred eeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccce
Confidence 799999996655555556678999999999999999999999999999999999999953 3359999999987
Q ss_pred ecCCC-CCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCC
Q 006004 307 TYDPS-QNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKP 358 (665)
Q Consensus 307 ~~~~~-~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~ 358 (665)
.+..- ........++|-.+-.+|+..| ..+++.+|.|.|+.+++.||.|+.
T Consensus 850 Dm~lfp~~~~F~~~~~td~f~C~EM~~g-rpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 850 DMKLFPDGTKFKAVWHTDLFDCIEMREG-RPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eeeEcCCCcEEeeeeccccchhHHHhcC-CCCchhhhhHHHHHHHHHHHHHHH
Confidence 65322 2234667788999999998887 789999999999999999999973
No 427
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.74 E-value=1.6e-18 Score=173.96 Aligned_cols=248 Identities=17% Similarity=0.215 Sum_probs=188.7
Q ss_pred CCCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEE
Q 006004 155 RRADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 155 ~~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~ 234 (665)
....+..++-+|.+...|..|++++.. ..+++|++..........+.|..|.-.|+-+.||||+.+++.+.... ++.
T Consensus 187 id~~~lnl~tkl~e~hsgelwrgrwqg--ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnspp-nlv 263 (448)
T KOG0195|consen 187 IDVSSLNLITKLAESHSGELWRGRWQG--NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPP-NLV 263 (448)
T ss_pred cchhhhhhhhhhccCCCcccccccccC--cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCC-Cce
Confidence 334456677889999999999999854 45788888766666666677889999999999999999999998764 789
Q ss_pred EEEEeccc-cchhhhcCC-CCCCChhHHHHHHHHHHHHHHHHHhCC--ccccCCCcccEEEcCCCcEEEEecccceecCC
Q 006004 235 LVFEYMEH-DLAGLATTP-GIKFTEPQIKCYMQQLLRGLEHCHSRG--ILHRDIKGSNLLINNAGVLKIGDFGLATTYDP 310 (665)
Q Consensus 235 lV~Ey~~g-~ll~~~~~~-~~~lse~~i~~i~~QIl~aL~~LH~~g--IiHrDLKPeNILld~~g~lKL~DFGlA~~~~~ 310 (665)
++..||+- +|+..+... +.-....++..++..|+.|+.|||+.. |.---|....++||++-+.+|. .+-+++.
T Consensus 264 ~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kfs-- 340 (448)
T KOG0195|consen 264 IISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKFS-- 340 (448)
T ss_pred EeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-cccceee--
Confidence 99999995 555555433 334677899999999999999999974 4444688889999998876663 2222211
Q ss_pred CCCCCcccccccccccCcccccCCcc--cCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhc
Q 006004 311 SQNLPLTSRVVTLWYRAPELLLGATK--YGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSK 388 (665)
Q Consensus 311 ~~~~~~~~~~gT~~Y~APE~l~~~~~--~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~ 388 (665)
.....+.-.|.||+||.+..... --.++|+|||+++||||.|...||..-.+.+.-.+|.-.
T Consensus 341 ---fqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkiale------------- 404 (448)
T KOG0195|consen 341 ---FQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALE------------- 404 (448)
T ss_pred ---eeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhc-------------
Confidence 01123345889999999975432 235799999999999999999999998888766665321
Q ss_pred cccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHH
Q 006004 389 SAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASAL 438 (665)
Q Consensus 389 ~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL 438 (665)
.....+++.++.....|+.-|+..||.+||....++
T Consensus 405 --------------glrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 405 --------------GLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred --------------cccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 112234467889999999999999999999877653
No 428
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.74 E-value=1.3e-17 Score=165.67 Aligned_cols=140 Identities=24% Similarity=0.230 Sum_probs=109.2
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCH--------------------HHHHHHHHHHHHHHhCCCCC
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDP--------------------ESVRFMAREIHILRKLDHPN 218 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~--------------------~~~~~~~~Ei~iL~~L~Hpn 218 (665)
.|.+.+.||+|+||.||++... +|+.||||+++...... .......+|+.++..+.|++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 3788899999999999999874 79999999987543110 01123567999999998874
Q ss_pred --cceeeeeeeccCCcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCc
Q 006004 219 --VMKLEGLVTSRSGSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGV 296 (665)
Q Consensus 219 --IV~l~~~~~~~~~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~ 296 (665)
+..+++. +..++||||+.|..+..+.. ......++.+|+.++.++|..||+|+||||+||||+.++.
T Consensus 95 i~v~~~~~~-----~~~~lv~e~~~g~~L~~~~~------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~ 163 (198)
T cd05144 95 FPVPKPIDW-----NRHAVVMEYIDGVELYRVRV------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEK 163 (198)
T ss_pred CCCCceeec-----CCceEEEEEeCCcchhhccc------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCc
Confidence 4444431 24589999999876554332 1456788999999999999999999999999999999999
Q ss_pred EEEEecccceecCC
Q 006004 297 LKIGDFGLATTYDP 310 (665)
Q Consensus 297 lKL~DFGlA~~~~~ 310 (665)
++|+|||++.....
T Consensus 164 ~~liDfg~~~~~~~ 177 (198)
T cd05144 164 IYIIDWPQMVSTDH 177 (198)
T ss_pred EEEEECCccccCCC
Confidence 99999999976644
No 429
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.70 E-value=6.4e-17 Score=160.09 Aligned_cols=133 Identities=20% Similarity=0.240 Sum_probs=101.8
Q ss_pred EeeccCceEEEEEEECCCCcEEEEEEEecCCCC-H-----HHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEE
Q 006004 165 KIGQGTYSSVYKARDLETGKIVALKKVRFANMD-P-----ESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 165 ~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~-~-----~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~E 238 (665)
.||+|+||.||++.+ +|..|++|........ . .....+.+|+++++.+.|+++.....++.... ..++|||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~-~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPD-NKTIVME 77 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC-CCEEEEE
Confidence 379999999999984 6788999986433211 1 12355778999999998887554443333333 5689999
Q ss_pred eccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceec
Q 006004 239 YMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTY 308 (665)
Q Consensus 239 y~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~ 308 (665)
|++|..+..+...... .++.||+.+|.+||+.|++|+|++|.|||++ ++.++|+|||++...
T Consensus 78 ~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 78 YIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred EECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 9998665544332211 7899999999999999999999999999999 799999999998764
No 430
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.69 E-value=1.4e-16 Score=156.02 Aligned_cols=138 Identities=25% Similarity=0.267 Sum_probs=99.9
Q ss_pred EEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHH----------------------HHHHHHHHHhCCCCC--
Q 006004 163 IDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRF----------------------MAREIHILRKLDHPN-- 218 (665)
Q Consensus 163 ~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~----------------------~~~Ei~iL~~L~Hpn-- 218 (665)
.+.||+|+||.||+|.+. +|+.||||+++........... ...|...+.++.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999976 8999999998754322111111 135666777764433
Q ss_pred cceeeeeeeccCCcEEEEEEeccccchh-hhcCCCCCCChhHHHHHHHHHHHHHHHHHh-CCccccCCCcccEEEcCCCc
Q 006004 219 VMKLEGLVTSRSGSLYLVFEYMEHDLAG-LATTPGIKFTEPQIKCYMQQLLRGLEHCHS-RGILHRDIKGSNLLINNAGV 296 (665)
Q Consensus 219 IV~l~~~~~~~~~~l~lV~Ey~~g~ll~-~~~~~~~~lse~~i~~i~~QIl~aL~~LH~-~gIiHrDLKPeNILld~~g~ 296 (665)
+.+++++ ...++||||+.++... ...... ... .++..++.+++.++.++|. .||+|+||||+|||++ ++.
T Consensus 81 ~~~~~~~-----~~~~lv~e~~~g~~~~~~~l~~~-~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~ 152 (187)
T cd05119 81 VPKPIDL-----NRHVLVMEFIGGDGIPAPRLKDV-RLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGK 152 (187)
T ss_pred CCceEec-----CCCEEEEEEeCCCCccChhhhhh-hhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCc
Confidence 4444442 1358999999983221 111111 111 6788999999999999999 9999999999999999 899
Q ss_pred EEEEecccceecC
Q 006004 297 LKIGDFGLATTYD 309 (665)
Q Consensus 297 lKL~DFGlA~~~~ 309 (665)
++|+|||++....
T Consensus 153 ~~liDfg~a~~~~ 165 (187)
T cd05119 153 VYIIDVPQAVEID 165 (187)
T ss_pred EEEEECccccccc
Confidence 9999999997654
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.67 E-value=3.9e-16 Score=178.23 Aligned_cols=138 Identities=17% Similarity=0.136 Sum_probs=106.7
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-C-----HHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCc
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-D-----PESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGS 232 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~-----~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~ 232 (665)
.|...+.||+|+||+||++.+... .+++|+...... . ......+.+|+++++.++|++|+....++.... .
T Consensus 334 ~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~-~ 410 (535)
T PRK09605 334 RKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE-E 410 (535)
T ss_pred ccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC-C
Confidence 345678999999999999987443 455554322111 1 112346789999999999999988776665543 5
Q ss_pred EEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceec
Q 006004 233 LYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTY 308 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~ 308 (665)
.++||||++|..+..... ....++.||+.+|.+||+.||+||||||+|||+ .++.++|+|||+++..
T Consensus 411 ~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred CEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 689999999866554332 457899999999999999999999999999999 6789999999999764
No 432
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.64 E-value=2.2e-15 Score=154.75 Aligned_cols=137 Identities=16% Similarity=0.197 Sum_probs=102.3
Q ss_pred EEee-ccCceEEEEEEECCCCcEEEEEEEecCCC-----------CHHHHHHHHHHHHHHHhCCCCCc--ceeeeeeecc
Q 006004 164 DKIG-QGTYSSVYKARDLETGKIVALKKVRFANM-----------DPESVRFMAREIHILRKLDHPNV--MKLEGLVTSR 229 (665)
Q Consensus 164 ~~LG-~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-----------~~~~~~~~~~Ei~iL~~L~HpnI--V~l~~~~~~~ 229 (665)
..|| .|+.|+||.+.. .+..+|||.+..... .......+.+|+.++.+|.|++| +..+++...+
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4677 889999999876 367899998753221 11223457889999999998775 6666654433
Q ss_pred CCcE---EEEEEeccc-cchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccc
Q 006004 230 SGSL---YLVFEYMEH-DLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLA 305 (665)
Q Consensus 230 ~~~l---~lV~Ey~~g-~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA 305 (665)
.+.. +|||||++| ..+..+.... .+++. .+.||+.+|.+||+.||+||||||+|||++.++.++|+|||.+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~-~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~ 189 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA-PLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRG 189 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC-CCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCc
Confidence 3223 599999997 3444333332 45554 3678999999999999999999999999999999999999988
Q ss_pred ee
Q 006004 306 TT 307 (665)
Q Consensus 306 ~~ 307 (665)
..
T Consensus 190 ~~ 191 (239)
T PRK01723 190 EL 191 (239)
T ss_pred cc
Confidence 75
No 433
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.62 E-value=1.3e-15 Score=168.56 Aligned_cols=206 Identities=28% Similarity=0.400 Sum_probs=153.3
Q ss_pred HHhCCCCCcceeeeeeeccCCcEEEEEEeccc-cchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCc-cccCCCccc
Q 006004 211 LRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEH-DLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGI-LHRDIKGSN 288 (665)
Q Consensus 211 L~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g-~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gI-iHrDLKPeN 288 (665)
|+.+.|.|+.++++...+. ..+++|.+||.- .+.+.+......++.-....+++.|+.||.|||.--| .|+.|+..|
T Consensus 1 l~~l~h~n~~~f~g~~~~~-~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecC-CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 4678999999999998887 478999999985 5555555556788888999999999999999998865 999999999
Q ss_pred EEEcCCCcEEEEecccceecCCC-CCCCcccccccccccCcccccCCc------ccCcccchhhhHHHHHHHHhCCCCCC
Q 006004 289 LLINNAGVLKIGDFGLATTYDPS-QNLPLTSRVVTLWYRAPELLLGAT------KYGAAIDMWSAGCILAELFAGKPIMP 361 (665)
Q Consensus 289 ILld~~g~lKL~DFGlA~~~~~~-~~~~~~~~~gT~~Y~APE~l~~~~------~~~~~sDIWSLG~iLyeLltG~~pF~ 361 (665)
.++|....+||.|||+....... .........-..-|.|||++.+.. ..+.+.|+||+|++++|+++...||.
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~ 159 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFD 159 (484)
T ss_pred ceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccc
Confidence 99999999999999998876421 111112222356699999987631 14677999999999999999999998
Q ss_pred CCCh----HHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHH
Q 006004 362 GRTE----VEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASA 437 (665)
Q Consensus 362 g~~~----~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~ea 437 (665)
.... .+.+..+.+ .+. .+++..+.. ...+++++..++..|+..+|..||+++++
T Consensus 160 ~~~~~~~~~eii~~~~~-~~~--------------------~~~rP~i~~-~~e~~~~l~~l~~~cw~e~P~~rPs~~~i 217 (484)
T KOG1023|consen 160 LRNLVEDPDEIILRVKK-GGS--------------------NPFRPSIEL-LNELPPELLLLVARCWEEIPEKRPSIEQI 217 (484)
T ss_pred cccccCChHHHHHHHHh-cCC--------------------CCcCcchhh-hhhcchHHHHHHHHhcccChhhCccHHHH
Confidence 6432 233333322 011 011111111 11466689999999999999999999987
Q ss_pred Hh
Q 006004 438 LR 439 (665)
Q Consensus 438 L~ 439 (665)
-.
T Consensus 218 ~~ 219 (484)
T KOG1023|consen 218 RS 219 (484)
T ss_pred Hh
Confidence 54
No 434
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.61 E-value=5.3e-15 Score=136.94 Aligned_cols=133 Identities=24% Similarity=0.232 Sum_probs=109.6
Q ss_pred EEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCC--CCcceeeeeeeccCCcEEEEEEe
Q 006004 162 KIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDH--PNVMKLEGLVTSRSGSLYLVFEY 239 (665)
Q Consensus 162 ~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~H--pnIV~l~~~~~~~~~~l~lV~Ey 239 (665)
+++.||+|.++.||++.... ..+++|.+..... ...+.+|+.+++.+.| .++++++.++... +..|++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~-~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESD-GWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC-CccEEEEEe
Confidence 45789999999999999744 6799998865432 3457889999999976 5888988877654 468999999
Q ss_pred ccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhC---CccccCCCcccEEEcCCCcEEEEecccceec
Q 006004 240 MEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSR---GILHRDIKGSNLLINNAGVLKIGDFGLATTY 308 (665)
Q Consensus 240 ~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~---gIiHrDLKPeNILld~~g~lKL~DFGlA~~~ 308 (665)
+.|..+..+ +......++.+++.+|.+||.. +++|+||+|+|||++..+.++|+|||++...
T Consensus 75 ~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 75 IEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred cCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 998655432 5566778899999999999985 7999999999999999899999999998753
No 435
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.58 E-value=1.2e-15 Score=169.00 Aligned_cols=255 Identities=22% Similarity=0.269 Sum_probs=199.4
Q ss_pred CCeeEEEEeec--cCceEEEEEEE--CCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeeccCCc
Q 006004 158 DAFEKIDKIGQ--GTYSSVYKARD--LETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTSRSGS 232 (665)
Q Consensus 158 ~~y~~~~~LG~--G~fg~Vy~a~~--~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~~ 232 (665)
..|.+...+|. |.+|.||.++. ..++..+|+|.-+.....+..-..=.+|+.-.+.+ .|+|.++.+..++... .
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~-~ 192 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSG-I 192 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCC-c
Confidence 35778889999 99999999998 89999999997332211112222234677777777 5999999888887754 8
Q ss_pred EEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHH----HHHHHHhCCccccCCCcccEEEcCC-CcEEEEeccccee
Q 006004 233 LYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLR----GLEHCHSRGILHRDIKGSNLLINNA-GVLKIGDFGLATT 307 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~----aL~~LH~~gIiHrDLKPeNILld~~-g~lKL~DFGlA~~ 307 (665)
+|+-+|++...+..........+++..++.++.+... ||.++|..+|+|-|+||+||++..+ ...+++|||+...
T Consensus 193 lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~ 272 (524)
T KOG0601|consen 193 LFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSK 272 (524)
T ss_pred ceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEE
Confidence 8999999999999998888877999999999999999 9999999999999999999999999 8899999999998
Q ss_pred cCCCCCCCc----ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCC--ChHHHHHHHHHhcCCCCh
Q 006004 308 YDPSQNLPL----TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGR--TEVEQMHKIFKLCGSPSE 381 (665)
Q Consensus 308 ~~~~~~~~~----~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~--~~~e~l~kI~~~~g~p~~ 381 (665)
+........ ...-|..-|++||++.+ -++...|+|+||.++.+-.++..++... +.+.++..++
T Consensus 273 i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~--l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~-------- 342 (524)
T KOG0601|consen 273 ISDGNFSSVFKVSKRPEGDCIYAAKELLNG--LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY-------- 342 (524)
T ss_pred ccCCccccceeeeecCCCCceEeChhhhcc--ccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc--------
Confidence 865432111 11146778999998875 6899999999999999988887655443 3333332221
Q ss_pred hHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCC
Q 006004 382 DYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKT 445 (665)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~ 445 (665)
...+.....+..+..++..||+.||..|+++..+++|++...
T Consensus 343 ----------------------ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s 384 (524)
T KOG0601|consen 343 ----------------------IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS 384 (524)
T ss_pred ----------------------CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence 112233356666677999999999999999999999999874
No 436
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.54 E-value=1.5e-15 Score=175.63 Aligned_cols=265 Identities=26% Similarity=0.302 Sum_probs=199.5
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEE
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLY 234 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~ 234 (665)
..+.+.+++.+-+|.++.++.+.-..+|-..++|+...... .....+.+..+-.++-...+|.++....-+.... .++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rs-P~~ 880 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRS-PLP 880 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCC-Ccc
Confidence 45678899999999999999999888887778877654432 2223344445555555556777776655544444 689
Q ss_pred EEEEecccc-chhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC--
Q 006004 235 LVFEYMEHD-LAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS-- 311 (665)
Q Consensus 235 lV~Ey~~g~-ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~-- 311 (665)
|+++|+.++ +...+... ...+++-++.++..+..++++||...+.|+|++|.|+|+..+|..++.|||+.......
T Consensus 881 L~~~~~~~~~~~Skl~~~-~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p 959 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNS-GCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPP 959 (1205)
T ss_pred hhhHHhccCCchhhhhcC-CCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccC
Confidence 999999864 44444433 36788888999999999999999999999999999999999999999999844322100
Q ss_pred -------------------C---------CCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCC
Q 006004 312 -------------------Q---------NLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGR 363 (665)
Q Consensus 312 -------------------~---------~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~ 363 (665)
. .......++|+.|.+||.+++ ...+..+|+|++|+++++.++|.+||...
T Consensus 960 ~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg-~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 960 TTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLG-RRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred cCCcccccccCccccccccccccccccchhhccccccCCCcccCCccccc-ccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence 0 001223468999999999987 56789999999999999999999999998
Q ss_pred ChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHH---HHHhC
Q 006004 364 TEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAA---SALRS 440 (665)
Q Consensus 364 ~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~---eaL~H 440 (665)
+.......|....- -| ..-....++.+.+++.++|..+|.+|..+. ++-.|
T Consensus 1039 tpq~~f~ni~~~~~-----~~---------------------p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~ 1092 (1205)
T KOG0606|consen 1039 TPQQIFENILNRDI-----PW---------------------PEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGH 1092 (1205)
T ss_pred chhhhhhccccCCC-----CC---------------------CCCccccChhhhhhhhhhhccCchhccCcccccccccC
Confidence 88776665543210 01 111235788999999999999999999887 99999
Q ss_pred cCCCCCCCC
Q 006004 441 EFFKTEPLP 449 (665)
Q Consensus 441 p~f~~~~~~ 449 (665)
+||+...+.
T Consensus 1093 ~~~~~~~~~ 1101 (1205)
T KOG0606|consen 1093 PFFQDVDWE 1101 (1205)
T ss_pred CccCCCCcc
Confidence 999976554
No 437
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.39 E-value=1.8e-12 Score=144.37 Aligned_cols=143 Identities=20% Similarity=0.225 Sum_probs=96.1
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCCCH----------------------------H----HHH------HHH
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANMDP----------------------------E----SVR------FMA 205 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~----------------------------~----~~~------~~~ 205 (665)
+.||.|++|.||+|+. .+|+.||||+.+...... + ... .+.
T Consensus 123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 5799999999999986 579999999987532100 0 000 133
Q ss_pred HHHHHHHhC----CCCCcceeeeeeeccCCcEEEEEEeccccchhhhcCC-CCCCChhHHHHHHHHHHH-HHHHHHhCCc
Q 006004 206 REIHILRKL----DHPNVMKLEGLVTSRSGSLYLVFEYMEHDLAGLATTP-GIKFTEPQIKCYMQQLLR-GLEHCHSRGI 279 (665)
Q Consensus 206 ~Ei~iL~~L----~HpnIV~l~~~~~~~~~~l~lV~Ey~~g~ll~~~~~~-~~~lse~~i~~i~~QIl~-aL~~LH~~gI 279 (665)
+|...+.++ .|.+-+.+-.++.......+|||||++|..+..+... ...+ ....++.+++. .+..+|..|+
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql~~~g~ 278 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQVLRDGF 278 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHHHhCCc
Confidence 455555544 2333344434443333356899999998655433221 1112 23455666665 4788999999
Q ss_pred cccCCCcccEEEcCCCcEEEEecccceecCC
Q 006004 280 LHRDIKGSNLLINNAGVLKIGDFGLATTYDP 310 (665)
Q Consensus 280 iHrDLKPeNILld~~g~lKL~DFGlA~~~~~ 310 (665)
+|+|+||.|||++.+|.++|+|||++..+..
T Consensus 279 ~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 279 FHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred eeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 9999999999999999999999999987643
No 438
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.38 E-value=3.3e-13 Score=149.70 Aligned_cols=257 Identities=23% Similarity=0.227 Sum_probs=190.0
Q ss_pred CCccCCCCCeeEEEEeeccCceEEEEEEEC-CCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcceeeeeeec
Q 006004 151 GWQPRRADAFEKIDKIGQGTYSSVYKARDL-ETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMKLEGLVTS 228 (665)
Q Consensus 151 ~~~~~~~~~y~~~~~LG~G~fg~Vy~a~~~-~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~ 228 (665)
.|......+|..+..||.|.|+.|+.+... .++..|++|.+.........-.+-..|+.+...| .|.+++..+..|..
T Consensus 258 ~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~ 337 (524)
T KOG0601|consen 258 DWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ 337 (524)
T ss_pred ccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccc
Confidence 344555678999999999999999998765 6788999998765443333333345677777777 59999988877765
Q ss_pred cCCcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCC-CcEEEEeccccee
Q 006004 229 RSGSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNA-GVLKIGDFGLATT 307 (665)
Q Consensus 229 ~~~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~-g~lKL~DFGlA~~ 307 (665)
-. ..||-.|||++....+...-...+.+...+.+..|++.++.++|...++|+|+||+||++..+ +..++.|||.+..
T Consensus 338 ~r-~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 338 LR-QGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred cc-cccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccc
Confidence 44 568999999987666555444468889999999999999999999999999999999999986 7889999999875
Q ss_pred cCCCCCCCccccccccccc-CcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhh
Q 006004 308 YDPSQNLPLTSRVVTLWYR-APELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRK 386 (665)
Q Consensus 308 ~~~~~~~~~~~~~gT~~Y~-APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~ 386 (665)
+... ......+-++. ..|++.....+..++|++|||..+++.+++.+.-...+... .|..
T Consensus 417 ~~~~----~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~---~i~~------------ 477 (524)
T KOG0601|consen 417 LAFS----SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSL---TIRS------------ 477 (524)
T ss_pred ccee----cccccccccccccchhhccccccccccccccccccccccccCcccCcccccce---eeec------------
Confidence 3221 12223445555 36666666788999999999999999999986443322111 1100
Q ss_pred hccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCC
Q 006004 387 SKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFK 444 (665)
Q Consensus 387 ~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~ 444 (665)
........+...+..+.+.++..|+..|+.+.++..|.=|-
T Consensus 478 -----------------~~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 478 -----------------GDTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred -----------------ccccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 01111123447788899999999999999999998886554
No 439
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.38 E-value=3.8e-13 Score=152.13 Aligned_cols=144 Identities=18% Similarity=0.285 Sum_probs=99.4
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC---------------------------CH-----HHHHHH--
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM---------------------------DP-----ESVRFM-- 204 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~---------------------------~~-----~~~~~~-- 204 (665)
.|+. +.||.|++|+||+|+.+.+|+.||||+++.... .. +..+.+
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 4666 799999999999999988899999999975310 00 111222
Q ss_pred ----HHHHHHHHhC----CCCCcceeeeeeeccCCcEEEEEEeccccchhhh---cCCCC---CCChhHHHHHHHHHHHH
Q 006004 205 ----AREIHILRKL----DHPNVMKLEGLVTSRSGSLYLVFEYMEHDLAGLA---TTPGI---KFTEPQIKCYMQQLLRG 270 (665)
Q Consensus 205 ----~~Ei~iL~~L----~HpnIV~l~~~~~~~~~~l~lV~Ey~~g~ll~~~---~~~~~---~lse~~i~~i~~QIl~a 270 (665)
.+|...+.++ .+.+.+.+-.+|.+-....+|||||+.|.-+..+ ...+. .+.+..+..++.||+
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif-- 277 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF-- 277 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH--
Confidence 3344444443 2444455444444433456899999998654432 22221 355666666777765
Q ss_pred HHHHHhCCccccCCCcccEEEcCCC----cEEEEecccceecCC
Q 006004 271 LEHCHSRGILHRDIKGSNLLINNAG----VLKIGDFGLATTYDP 310 (665)
Q Consensus 271 L~~LH~~gIiHrDLKPeNILld~~g----~lKL~DFGlA~~~~~ 310 (665)
..|++|+|+||.|||++.+| .++++|||++..++.
T Consensus 278 -----~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 278 -----RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred -----hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 48999999999999999988 999999999987754
No 440
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.38 E-value=3.1e-12 Score=127.14 Aligned_cols=140 Identities=18% Similarity=0.215 Sum_probs=101.1
Q ss_pred EEeeccCceEEEEEEECC------CCcEEEEEEEecCCC-----------C---------HHHHHHH----HHHHHHHHh
Q 006004 164 DKIGQGTYSSVYKARDLE------TGKIVALKKVRFANM-----------D---------PESVRFM----AREIHILRK 213 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~------~g~~vAiK~i~~~~~-----------~---------~~~~~~~----~~Ei~iL~~ 213 (665)
..||.|--+.||.|.... .+..+|||+.+.... + ......+ .+|+..|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998643 357899998863210 0 0111222 279999999
Q ss_pred CC--CCCcceeeeeeeccCCcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHH-HhCCccccCCCcccEE
Q 006004 214 LD--HPNVMKLEGLVTSRSGSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHC-HSRGILHRDIKGSNLL 290 (665)
Q Consensus 214 L~--HpnIV~l~~~~~~~~~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~L-H~~gIiHrDLKPeNIL 290 (665)
|. .-++.+++++ . .-+|||||++++.+....-....+++.++..++.+++.+|..| |..||+|+||++.|||
T Consensus 83 l~~~Gv~vP~pi~~--~---~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL 157 (197)
T cd05146 83 MQKAGIPCPEVVVL--K---KHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNML 157 (197)
T ss_pred HHHcCCCCCeEEEe--c---CCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 84 3456666654 2 2489999998753321111222466677788899999999998 8999999999999999
Q ss_pred EcCCCcEEEEecccceecC
Q 006004 291 INNAGVLKIGDFGLATTYD 309 (665)
Q Consensus 291 ld~~g~lKL~DFGlA~~~~ 309 (665)
++ ++.+.|+|||.+...+
T Consensus 158 ~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 158 WH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred EE-CCcEEEEECCCceeCC
Confidence 97 4789999999988754
No 441
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.36 E-value=3.2e-12 Score=122.67 Aligned_cols=128 Identities=16% Similarity=0.135 Sum_probs=95.0
Q ss_pred EEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcc-eeeeeeeccCCcEEEEEEecc
Q 006004 163 IDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVM-KLEGLVTSRSGSLYLVFEYME 241 (665)
Q Consensus 163 ~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV-~l~~~~~~~~~~l~lV~Ey~~ 241 (665)
++.|+.|.++.||+++.. +..|++|+...... ....+.+|+.+++.+.+.+++ +++.+.. . .-++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~-~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFDP--E-TGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEeC--C-CCeEEEEecC
Confidence 467899999999999863 77899998754321 122356899999998655544 4554332 2 3479999999
Q ss_pred ccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCc-----cccCCCcccEEEcCCCcEEEEeccccee
Q 006004 242 HDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGI-----LHRDIKGSNLLINNAGVLKIGDFGLATT 307 (665)
Q Consensus 242 g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gI-----iHrDLKPeNILld~~g~lKL~DFGlA~~ 307 (665)
|..+... ......++.+++.+|..||..++ +|+|++|.|||++ ++.++|+|||.+..
T Consensus 75 G~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 75 GSELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred CCccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 8654322 11123567899999999999985 9999999999999 67899999998764
No 442
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.26 E-value=5.3e-11 Score=133.58 Aligned_cols=184 Identities=20% Similarity=0.341 Sum_probs=134.5
Q ss_pred eeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEe
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEY 239 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey 239 (665)
|.+ ...+-++.+..-.+..+.++.+|.|..++...- +......+-++-|+.|+||||+++++.++... .+|||+|-
T Consensus 15 Y~l-e~~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~-~~ylvTEr 90 (690)
T KOG1243|consen 15 YDL-EETAFSSEALWPDGTRKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEEG-TLYLVTER 90 (690)
T ss_pred ccc-ccccCCCcccccccceeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcccC-ceEEEeec
Confidence 444 333334443322456677888999998876543 44555778889999999999999999988754 89999999
Q ss_pred ccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHH-hCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccc
Q 006004 240 MEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCH-SRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTS 318 (665)
Q Consensus 240 ~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH-~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~ 318 (665)
+..= -..+. .+....+..-+.||+.||.||| +.+++|++|.-+-|+|+..|..||++|.++........ +...
T Consensus 91 V~Pl-~~~lk----~l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~ 164 (690)
T KOG1243|consen 91 VRPL-ETVLK----ELGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKS 164 (690)
T ss_pred cccH-HHHHH----HhHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-cccc
Confidence 8641 11111 2346778888999999999998 56899999999999999999999999999876543221 1122
Q ss_pred ccccccccCcccccCCcccCcccchhhhHHHHHHHHhC
Q 006004 319 RVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAG 356 (665)
Q Consensus 319 ~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG 356 (665)
..---.|..|+.+... ....|.|-|||++++++.|
T Consensus 165 ~~~~~s~~~P~~~~~s---~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 165 LYLIESFDDPEEIDPS---EWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred chhhhcccChhhcCcc---ccchhhhhHHHHHHHHhCc
Confidence 2223447777765431 2567999999999999999
No 443
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.21 E-value=1.4e-12 Score=134.81 Aligned_cols=238 Identities=22% Similarity=0.238 Sum_probs=155.2
Q ss_pred EEEEEEECCCCcEEEEEEEecCCC-CHH-HHHHHHHHHHHHHhCCCCCcceeeeeeeccC----CcEEEEEEeccccchh
Q 006004 173 SVYKARDLETGKIVALKKVRFANM-DPE-SVRFMAREIHILRKLDHPNVMKLEGLVTSRS----GSLYLVFEYMEHDLAG 246 (665)
Q Consensus 173 ~Vy~a~~~~~g~~vAiK~i~~~~~-~~~-~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~----~~l~lV~Ey~~g~ll~ 246 (665)
.||++-+.+.|-.|+.-.+++... +.. .-.....-..-|-++.|-|||+++.|+.+.. ....++.|||..+.+.
T Consensus 81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~ 160 (458)
T KOG1266|consen 81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLK 160 (458)
T ss_pred HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHH
Confidence 478888888887766655543221 111 1111222234456678999999999987642 2578999999965444
Q ss_pred hhc----CCCCCCChhHHHHHHHHHHHHHHHHHhC--CccccCCCcccEEEcCCCcEEEEecccceecCCCCCC----Cc
Q 006004 247 LAT----TPGIKFTEPQIKCYMQQLLRGLEHCHSR--GILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNL----PL 316 (665)
Q Consensus 247 ~~~----~~~~~lse~~i~~i~~QIl~aL~~LH~~--gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~----~~ 316 (665)
..+ .....+.....++|+.||+.||.|||+. -|+|+++..+-|++..+|-+||+--- -..+....+. ..
T Consensus 161 ~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~a-p~s~h~s~~~~~~~Ek 239 (458)
T KOG1266|consen 161 QFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVA-PDSTHPSVNSTREAEK 239 (458)
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccC-ccccchhhhhhhHhhh
Confidence 333 2345688999999999999999999998 49999999999999999988874221 1111111110 01
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCC-CCCCChHHHHHHHHHhcCCCChhHHhhhccccccCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPI-MPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSF 395 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~p-F~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~ 395 (665)
.--.+-++|.+||.=.. ...+.++|||++|....+|..+..- -.+....+.-..|....
T Consensus 240 ~~~~~~~g~~a~~sg~~-tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i------------------- 299 (458)
T KOG1266|consen 240 SVNTSLPGFSAPESGTT-TNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVI------------------- 299 (458)
T ss_pred hccccCCccccCCcCcc-cccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhhe-------------------
Confidence 11135688999996543 4567889999999999999887632 22222111111111110
Q ss_pred CCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCC
Q 006004 396 KPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFK 444 (665)
Q Consensus 396 ~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~ 444 (665)
+..-..--+++|.+||+-.|..||++.++|.||.+-
T Consensus 300 -------------~~len~lqr~~i~kcl~~eP~~rp~ar~llfHpllf 335 (458)
T KOG1266|consen 300 -------------IGLENGLQRGSITKCLEGEPNGRPDARLLLFHPLLF 335 (458)
T ss_pred -------------eeccCccccCcCcccccCCCCCCcchhhhhcCceee
Confidence 000011134689999999999999999999999864
No 444
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.16 E-value=2.8e-10 Score=113.50 Aligned_cols=141 Identities=23% Similarity=0.287 Sum_probs=106.0
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCC--CCcceeeeeeeccC--CcEEEEEEe
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDH--PNVMKLEGLVTSRS--GSLYLVFEY 239 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~H--pnIV~l~~~~~~~~--~~l~lV~Ey 239 (665)
+.|+.|.++.||++... +|+.|++|+....... .....+.+|+.+++.+.+ .++.+++.+..... +..++||||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~ 81 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER 81 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence 67899999999999864 3678999987643321 123457889999999965 44566776654321 356899999
Q ss_pred ccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHh-------------------------------------------
Q 006004 240 MEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHS------------------------------------------- 276 (665)
Q Consensus 240 ~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~------------------------------------------- 276 (665)
++|..+...... ..+++.+...++.+++.+|..||+
T Consensus 82 i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 82 VDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred eCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 999766544321 357778888888888888888884
Q ss_pred -------------CCccccCCCcccEEEcC--CCcEEEEeccccee
Q 006004 277 -------------RGILHRDIKGSNLLINN--AGVLKIGDFGLATT 307 (665)
Q Consensus 277 -------------~gIiHrDLKPeNILld~--~g~lKL~DFGlA~~ 307 (665)
..++|+|++|.|||++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 23689999999999998 67789999998765
No 445
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.11 E-value=1.5e-09 Score=118.82 Aligned_cols=214 Identities=20% Similarity=0.239 Sum_probs=155.1
Q ss_pred ceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc---CCcEEEEEEeccc--cch
Q 006004 171 YSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR---SGSLYLVFEYMEH--DLA 245 (665)
Q Consensus 171 fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~---~~~l~lV~Ey~~g--~ll 245 (665)
-.+.|+|....+|..|++|.++-.... .......-+++++++.|+|||++.++|... +..+++|++|.++ .|+
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~--~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQ--STNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred cceeEeeeeccCCceeeeeeecccccc--CcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHH
Confidence 357899999999999999999433221 111223457889999999999999988743 4478999999885 344
Q ss_pred hhhcC--------------CCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 246 GLATT--------------PGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 246 ~~~~~--------------~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
+++.. .+...+|..+|.|+.||..||.++|+.|+..+-|.|.+||++.+..++|..-|....+..+
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 43332 2335789999999999999999999999999999999999999888888777766655443
Q ss_pred CCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhcccc
Q 006004 312 QNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAH 391 (665)
Q Consensus 312 ~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~ 391 (665)
.. |.+.. -.+-|.=-||.+++.|.+|..--.-.+ ..+-..
T Consensus 447 ~~---------------~~le~----~Qq~D~~~lG~ll~aLAt~~~ns~~~d-~~~~s~-------------------- 486 (655)
T KOG3741|consen 447 PT---------------EPLES----QQQNDLRDLGLLLLALATGTENSNRTD-STQSSH-------------------- 486 (655)
T ss_pred CC---------------cchhH----HhhhhHHHHHHHHHHHhhccccccccc-chHHHH--------------------
Confidence 21 11222 245688899999999999963211111 111110
Q ss_pred ccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhC
Q 006004 392 ATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRS 440 (665)
Q Consensus 392 ~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~H 440 (665)
+......++.+++++|.-+...++++ -++.++|.|
T Consensus 487 -------------~~~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 487 -------------LTRITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred -------------HHHhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 11222467889999999999999987 788888876
No 446
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.04 E-value=2.3e-09 Score=103.90 Aligned_cols=143 Identities=17% Similarity=0.245 Sum_probs=101.4
Q ss_pred EEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHH-----HHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEE
Q 006004 162 KIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPE-----SVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 162 ~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~-----~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~l 235 (665)
.+..|-+|+-+.|+++.+ .|+.+.||.-..... .+. ..++..+|+.+|.++.--.|.-..-+|.+.. .-.|
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~-~~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY-GGQI 87 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC-CCeE
Confidence 567888999999999986 688888886422221 111 2346788999999986444433333344433 3479
Q ss_pred EEEeccc--cchhhhcCCCCCCChhH-HHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCC---cEEEEeccccee
Q 006004 236 VFEYMEH--DLAGLATTPGIKFTEPQ-IKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAG---VLKIGDFGLATT 307 (665)
Q Consensus 236 V~Ey~~g--~ll~~~~~~~~~lse~~-i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g---~lKL~DFGlA~~ 307 (665)
+|||++| .+.+.+......-.+++ ...++++|-+.|.-||.++|+|+||..+||||..+| .+.|+|||++..
T Consensus 88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 9999998 44444443322223333 378999999999999999999999999999998765 358999999764
No 447
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.03 E-value=1.8e-09 Score=105.07 Aligned_cols=131 Identities=25% Similarity=0.294 Sum_probs=94.3
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCC-CHHH-----HHHHHHHHHHHHhCCCC--CcceeeeeeeccCCcEEE
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANM-DPES-----VRFMAREIHILRKLDHP--NVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~-~~~~-----~~~~~~Ei~iL~~L~Hp--nIV~l~~~~~~~~~~l~l 235 (665)
..+.+|+-+.+|.+.+ -|..+++|.-..... .++. .....+|..++..+.-- +...++++.. . .-.|
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~--~-~~~I 76 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDP--D-NGLI 76 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcC--C-CCEE
Confidence 3578899999999965 344577775422221 2221 23567899999988543 3344454432 2 4579
Q ss_pred EEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEeccccee
Q 006004 236 VFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATT 307 (665)
Q Consensus 236 V~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~ 307 (665)
+|||++|.++....... .-.++..+-.-+.-||..||+|+||.++||++...+ +.++||||+..
T Consensus 77 ~me~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 77 VMEYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EEEEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99999998887555433 246777888888999999999999999999998765 99999999875
No 448
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.98 E-value=7.4e-09 Score=102.51 Aligned_cols=128 Identities=25% Similarity=0.307 Sum_probs=85.6
Q ss_pred EEEEEEECCCCcEEEEEEEecCCC-----------------------CHH-HHHHHHHHHHHHHhCCCC--Ccceeeeee
Q 006004 173 SVYKARDLETGKIVALKKVRFANM-----------------------DPE-SVRFMAREIHILRKLDHP--NVMKLEGLV 226 (665)
Q Consensus 173 ~Vy~a~~~~~g~~vAiK~i~~~~~-----------------------~~~-~~~~~~~Ei~iL~~L~Hp--nIV~l~~~~ 226 (665)
.||.|.. .+|..+|||+.+.... ... ......+|..+|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 4899986 5678999998863210 001 123467899999999755 566666542
Q ss_pred eccCCcEEEEEEecc--ccchhhhcCCCCCCChhHHHHHHHHHHHHHHH-HHhCCccccCCCcccEEEcCCCcEEEEecc
Q 006004 227 TSRSGSLYLVFEYME--HDLAGLATTPGIKFTEPQIKCYMQQLLRGLEH-CHSRGILHRDIKGSNLLINNAGVLKIGDFG 303 (665)
Q Consensus 227 ~~~~~~l~lV~Ey~~--g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~-LH~~gIiHrDLKPeNILld~~g~lKL~DFG 303 (665)
+ -+|||||++ |..+..+... .++..+...++.+++..+.. +|..||+|+||.+.|||++.+ .+.|+|||
T Consensus 80 --~---~~ivME~I~~~G~~~~~l~~~--~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~ 151 (188)
T PF01163_consen 80 --R---NVIVMEYIGEDGVPLPRLKDV--DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFG 151 (188)
T ss_dssp --T---TEEEEE--EETTEEGGCHHHC--GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GT
T ss_pred --C---CEEEEEecCCCccchhhHHhc--cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecC
Confidence 2 279999999 6555444332 23356778888999986655 579999999999999999987 89999999
Q ss_pred cceecC
Q 006004 304 LATTYD 309 (665)
Q Consensus 304 lA~~~~ 309 (665)
.+....
T Consensus 152 qav~~~ 157 (188)
T PF01163_consen 152 QAVDSS 157 (188)
T ss_dssp TEEETT
T ss_pred cceecC
Confidence 987653
No 449
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.94 E-value=5.1e-10 Score=126.23 Aligned_cols=158 Identities=23% Similarity=0.360 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHhC-CccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCccc--------ccccccccCcccccCCc
Q 006004 265 QQLLRGLEHCHSR-GILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTS--------RVVTLWYRAPELLLGAT 335 (665)
Q Consensus 265 ~QIl~aL~~LH~~-gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~--------~~gT~~Y~APE~l~~~~ 335 (665)
.+...||.|+|.. ++||+.|.|++|.++..|..||+.|+++.........+... ..-...|.|||++.. .
T Consensus 106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~-~ 184 (700)
T KOG2137|consen 106 GNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG-T 184 (700)
T ss_pred hcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc-c
Confidence 3444999999976 99999999999999999999999999987654422211111 123667999999987 6
Q ss_pred ccCcccchhhhHHHHHHHH-hCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcH
Q 006004 336 KYGAAIDMWSAGCILAELF-AGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQ 414 (665)
Q Consensus 336 ~~~~~sDIWSLG~iLyeLl-tG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~ 414 (665)
..+.++|+|||||++|.+. .|+..|.+.........-....+. .......++|+
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~-------------------------~~~~~s~~~p~ 239 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNA-------------------------GAFGYSNNLPS 239 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhccccc-------------------------ccccccccCcH
Confidence 7799999999999999998 777777665443333322111110 01112257999
Q ss_pred HHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCC
Q 006004 415 SALALVDKLLTIEPENRGSAASALRSEFFKTEPL 448 (665)
Q Consensus 415 ~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~ 448 (665)
++++=|.++|..|+..||++.+++..|||.+...
T Consensus 240 el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~~ 273 (700)
T KOG2137|consen 240 ELRESLKKLLNGDSAVRPTLDLLLSIPFFSDPGL 273 (700)
T ss_pred HHHHHHHHHhcCCcccCcchhhhhcccccCCchh
Confidence 9999999999999999999999999999987543
No 450
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.87 E-value=4.6e-08 Score=102.24 Aligned_cols=131 Identities=17% Similarity=0.102 Sum_probs=89.3
Q ss_pred EEEEEECCCCcEEEEEEEecCCCCHHHHH----------HHHHHHHHHHhCCCCCc--ceeeeeeecc----CCcEEEEE
Q 006004 174 VYKARDLETGKIVALKKVRFANMDPESVR----------FMAREIHILRKLDHPNV--MKLEGLVTSR----SGSLYLVF 237 (665)
Q Consensus 174 Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~----------~~~~Ei~iL~~L~HpnI--V~l~~~~~~~----~~~l~lV~ 237 (665)
|+++.. .|+.|.||....... .+..+ .+.+|...+.+|..-+| ..+..+.+.. ...-+|||
T Consensus 38 vvr~~~--~g~~~~vKr~~~~~~-~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 38 TLRFEL--AGKSYFLKWHRGTGW-GEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred EEEEEE--CCEEEEEEEecCCcH-HHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 555543 577899996632221 11111 36789888888843333 3344444332 12468999
Q ss_pred Eecccc-chhhhcCC--CCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcC-------CCcEEEEeccccee
Q 006004 238 EYMEHD-LAGLATTP--GIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINN-------AGVLKIGDFGLATT 307 (665)
Q Consensus 238 Ey~~g~-ll~~~~~~--~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~-------~g~lKL~DFGlA~~ 307 (665)
|++++. .+..+... ....++.....++.+|+..+.-||..||+|+||++.||||+. ++.+.|+||+.+..
T Consensus 115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 999984 33333221 234566778899999999999999999999999999999985 46899999998754
No 451
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.71 E-value=9.5e-08 Score=98.16 Aligned_cols=138 Identities=26% Similarity=0.268 Sum_probs=103.0
Q ss_pred eeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCC--------------------HHHHHHHHHHHHHHHhCCCC--
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMD--------------------PESVRFMAREIHILRKLDHP-- 217 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~--------------------~~~~~~~~~Ei~iL~~L~Hp-- 217 (665)
+.+...||-|--|.||.|.+. .|..+|||.-+..... .-......+|.++|++|.-.
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 456689999999999999975 6889999976532110 01123457899999999644
Q ss_pred CcceeeeeeeccCCcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcE
Q 006004 218 NVMKLEGLVTSRSGSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVL 297 (665)
Q Consensus 218 nIV~l~~~~~~~~~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~l 297 (665)
.|.+.++. + .-.+||||++|-.+.... ++...+..++..|++-+..+-..||||+|+.+=|||++++|.+
T Consensus 172 ~VP~P~~~----n-RHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~ 241 (304)
T COG0478 172 KVPKPIAW----N-RHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDI 241 (304)
T ss_pred CCCCcccc----c-cceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCE
Confidence 67776663 2 458999999995554322 2455566677777777777778999999999999999999999
Q ss_pred EEEecccceec
Q 006004 298 KIGDFGLATTY 308 (665)
Q Consensus 298 KL~DFGlA~~~ 308 (665)
.|+||--+...
T Consensus 242 ~vIDwPQ~v~~ 252 (304)
T COG0478 242 VVIDWPQAVPI 252 (304)
T ss_pred EEEeCcccccC
Confidence 99999766543
No 452
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.68 E-value=7e-07 Score=96.04 Aligned_cols=245 Identities=14% Similarity=0.119 Sum_probs=152.8
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhC-CCCCcce--------eeeeeeccCCcEE
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKL-DHPNVMK--------LEGLVTSRSGSLY 234 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~--------l~~~~~~~~~~l~ 234 (665)
+.||+|+-+.+|-.-.-. -.+.|++...... ... .-+..|... .||-+-. |++- ++...+-
T Consensus 17 r~LgqGgea~ly~l~e~~---d~VAKIYh~Pppa-~~a----qk~a~la~~p~~p~~~~rvaWPqa~L~G~--~~~~~iG 86 (637)
T COG4248 17 RPLGQGGEADLYTLGEVR---DQVAKIYHAPPPA-AQA----QKVAELAATPDAPLLNYRVAWPQATLHGG--RRGKVIG 86 (637)
T ss_pred ccccCCccceeeecchhh---chhheeecCCCch-HHH----HHHHHhccCCCCcchhhhhcccHHHhhCC--CccceeE
Confidence 679999999999764322 2567877643211 111 122333333 5664432 2221 2222377
Q ss_pred EEEEecccc--chhhhc-----CCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEeccccee
Q 006004 235 LVFEYMEHD--LAGLAT-----TPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATT 307 (665)
Q Consensus 235 lV~Ey~~g~--ll~~~~-----~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~ 307 (665)
++|..+.|. ...++. +.-..+.++.+....+.|+.+...||..|.+-+|+.++|+|+.+++.+.|.|=..-..
T Consensus 87 flmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 87 FLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred EecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceee
Confidence 889988873 111111 1122367788999999999999999999999999999999999999999998765444
Q ss_pred cCCCCCCCcccccccccccCccccc-C---CcccCcccchhhhHHHHHHHHhC-CCCCCCCC-------hHHHHHHHHHh
Q 006004 308 YDPSQNLPLTSRVVTLWYRAPELLL-G---ATKYGAAIDMWSAGCILAELFAG-KPIMPGRT-------EVEQMHKIFKL 375 (665)
Q Consensus 308 ~~~~~~~~~~~~~gT~~Y~APE~l~-~---~~~~~~~sDIWSLG~iLyeLltG-~~pF~g~~-------~~e~l~kI~~~ 375 (665)
... .......+|...|.+||.-. + .-.-+...|.|.||+++++||.| +.||.|.. ..|. .|...
T Consensus 167 ~~n--g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~--~Ia~g 242 (637)
T COG4248 167 NAN--GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLET--DIAHG 242 (637)
T ss_pred ccC--CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchh--hhhcc
Confidence 322 22344568999999999653 1 12346789999999999999877 89998742 1110 11111
Q ss_pred cCCCChhHHhhhccccccCCCCCCcchhh-hhhhccCCcHHHHHHHHHhccc--CcCCCcCHHH
Q 006004 376 CGSPSEDYWRKSKSAHATSFKPQQPYKRK-VLETFRNFPQSALALVDKLLTI--EPENRGSAAS 436 (665)
Q Consensus 376 ~g~p~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~s~~a~dLI~~lL~~--DP~~RpTa~e 436 (665)
.... ..+...+++.. ....+.-+++++..|..+|+.. ++.-|||++-
T Consensus 243 ~f~y--------------a~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 243 RFAY--------------ASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred eeee--------------chhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 0000 00001111111 1122345789999999999874 3668999754
No 453
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.65 E-value=7.6e-09 Score=115.68 Aligned_cols=246 Identities=19% Similarity=0.146 Sum_probs=168.1
Q ss_pred eeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCC-cceeeeeeeccCCcEEEEEE
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPN-VMKLEGLVTSRSGSLYLVFE 238 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~Hpn-IV~l~~~~~~~~~~l~lV~E 238 (665)
|.....+++|+++++++.+...+...+ .+.+... ....-++++|.+++||| .+..++-++. +...+++|+
T Consensus 244 s~~fh~fvK~altknpKkRptaeklL~-h~fvs~~-------l~~rl~~eLLdK~n~P~~~v~~~~d~~~-E~~~~i~~~ 314 (829)
T KOG0576|consen 244 SEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT-------LSRRLAIELLDKVNNPNPVVRYLEDYDG-EDYLWIPMR 314 (829)
T ss_pred hHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc-------hhhHHHHHHHHHccCCCCcccccccCCc-ccccchhhh
Confidence 556677899999999999987766555 6766532 22345899999999999 5554444443 337889999
Q ss_pred ecccc--chhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecccceecCCCCCCCc
Q 006004 239 YMEHD--LAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFGLATTYDPSQNLPL 316 (665)
Q Consensus 239 y~~g~--ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~ 316 (665)
++.++ ...........|.+-+.....+.-+.+|++||+.-=+|+| |||..+ +..|+.||+.+..+.... ..
T Consensus 315 i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~--~~ 387 (829)
T KOG0576|consen 315 ICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM--KP 387 (829)
T ss_pred hhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccCccc--cc
Confidence 99875 2222222333456666777778888999999988778998 887766 778999999988775443 24
Q ss_pred ccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCC
Q 006004 317 TSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFK 396 (665)
Q Consensus 317 ~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~ 396 (665)
.+..+|+.++|||++.. ..+....|.|++|+--.+|.-|-+|-...- .... ..|..+.. ++.+
T Consensus 388 ~t~~~~~~~~~pev~~~-~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~--~~~~----~~g~~p~s-------~~L~--- 450 (829)
T KOG0576|consen 388 RTAIGTPEPLAPEVIQE-NTIDGCPDSGSLAVSAIQMAPGLPPRSSPP--AVLP----MIGNGPNS-------PMLT--- 450 (829)
T ss_pred ccCCCCCCCCCchhhcc-cccccCCCccCCCcchhhcCCCCCCCCCCc--cccC----CCCCCCCc-------cccc---
Confidence 56689999999998876 678999999999988778877777654310 0000 00111000 0000
Q ss_pred CCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCCCCCC
Q 006004 397 PQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFKTEPL 448 (665)
Q Consensus 397 ~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~~~~~ 448 (665)
-+..+ -+..-.++...||..-|..|++...++.|.+|..-++
T Consensus 451 ----~~~aw------~~~~~~~~~~~~~~g~P~~pkv~mgacfsKvfngCpl 492 (829)
T KOG0576|consen 451 ----DKSAW------SPVFHRDFPAPCLNGLPPTPKVHMGACFSKVFNGCPL 492 (829)
T ss_pred ----hhhhc------CcccccCCcccccCCCCCCCcchhhHHHHHHhccCcc
Confidence 00000 0011115778899999999999999999999987554
No 454
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.63 E-value=2.8e-07 Score=92.61 Aligned_cols=106 Identities=19% Similarity=0.160 Sum_probs=79.6
Q ss_pred HHHHHHHHHHhCCCC--CcceeeeeeeccC---CcEEEEEEecccc-chhhhcCCCCCCChhHHHHHHHHHHHHHHHHHh
Q 006004 203 FMAREIHILRKLDHP--NVMKLEGLVTSRS---GSLYLVFEYMEHD-LAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHS 276 (665)
Q Consensus 203 ~~~~Ei~iL~~L~Hp--nIV~l~~~~~~~~---~~l~lV~Ey~~g~-ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~ 276 (665)
...+|...+..|..- .+.+.+.+..... ...+||+|++++. .+..+......++......++.+++..+.-||.
T Consensus 57 ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH~ 136 (206)
T PF06293_consen 57 RAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLHD 136 (206)
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHHH
Confidence 467888888887433 3344555544432 2358999999973 344444332236777889999999999999999
Q ss_pred CCccccCCCcccEEEcCCC---cEEEEecccceec
Q 006004 277 RGILHRDIKGSNLLINNAG---VLKIGDFGLATTY 308 (665)
Q Consensus 277 ~gIiHrDLKPeNILld~~g---~lKL~DFGlA~~~ 308 (665)
.||+|+|+++.|||++.++ .+.|+||+.+...
T Consensus 137 ~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 137 AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred CcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 9999999999999999887 8999999987753
No 455
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.44 E-value=3.9e-06 Score=85.64 Aligned_cols=140 Identities=20% Similarity=0.269 Sum_probs=98.9
Q ss_pred EEEeeccCceEEEEEEECCCCcEEEEEEEecCCCC--------------------HHHHH--HHHHHHHHHHhCC--CCC
Q 006004 163 IDKIGQGTYSSVYKARDLETGKIVALKKVRFANMD--------------------PESVR--FMAREIHILRKLD--HPN 218 (665)
Q Consensus 163 ~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~--------------------~~~~~--~~~~Ei~iL~~L~--Hpn 218 (665)
...|..|--+.||+|.. .++..+|+|+++..... ..... -..+|+.-|+++. +-.
T Consensus 53 ~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVr 131 (268)
T COG1718 53 VGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVR 131 (268)
T ss_pred EeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 34777888999999985 56889999998743211 11111 1235777788873 445
Q ss_pred cceeeeeeeccCCcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHh-CCccccCCCcccEEEcCCCcE
Q 006004 219 VMKLEGLVTSRSGSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHS-RGILHRDIKGSNLLINNAGVL 297 (665)
Q Consensus 219 IV~l~~~~~~~~~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~-~gIiHrDLKPeNILld~~g~l 297 (665)
+.+-+.+.. -.|||||++.+..-.-.-....+...++..+..+++..+.-|-. .|+||+||..=|||+. ++.+
T Consensus 132 vP~Pi~~~~-----nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p 205 (268)
T COG1718 132 VPEPIAFRN-----NVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEP 205 (268)
T ss_pred CCCceeecC-----CeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeE
Confidence 555565432 37999999865221111122234455788889999999988877 8999999999999999 7899
Q ss_pred EEEecccceecC
Q 006004 298 KIGDFGLATTYD 309 (665)
Q Consensus 298 KL~DFGlA~~~~ 309 (665)
.|+|||-|....
T Consensus 206 ~iID~~QaV~~~ 217 (268)
T COG1718 206 YIIDVSQAVTID 217 (268)
T ss_pred EEEECccccccC
Confidence 999999887654
No 456
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.43 E-value=6e-06 Score=82.51 Aligned_cols=139 Identities=23% Similarity=0.304 Sum_probs=80.7
Q ss_pred EEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCC--Ccceeeeeeecc--CCcEEEEEE
Q 006004 163 IDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHP--NVMKLEGLVTSR--SGSLYLVFE 238 (665)
Q Consensus 163 ~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~Hp--nIV~l~~~~~~~--~~~l~lV~E 238 (665)
++.|+.|..+.||++.... ..+++|..... .....+.+|..+++.|... .+.+++.+.... ....+++|+
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~ 75 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLME 75 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEE
Confidence 5789999999999999754 48999987532 3455677899998888433 345666533222 345799999
Q ss_pred eccccchhh--------------------hcCC---CCCCChhH---------HHHH------------HHHHHH-HHHH
Q 006004 239 YMEHDLAGL--------------------ATTP---GIKFTEPQ---------IKCY------------MQQLLR-GLEH 273 (665)
Q Consensus 239 y~~g~ll~~--------------------~~~~---~~~lse~~---------i~~i------------~~QIl~-aL~~ 273 (665)
+++|..+.. +.+. ...+.... .... ...+.. .+..
T Consensus 76 ~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (239)
T PF01636_consen 76 YIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQE 155 (239)
T ss_dssp EESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred EeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHH
Confidence 999853333 0011 01110000 0000 111222 2333
Q ss_pred HH-------hCCccccCCCcccEEEc-CCCcEEEEeccccee
Q 006004 274 CH-------SRGILHRDIKGSNLLIN-NAGVLKIGDFGLATT 307 (665)
Q Consensus 274 LH-------~~gIiHrDLKPeNILld-~~g~lKL~DFGlA~~ 307 (665)
++ ...++|+|+.|.|||++ .++.+-|+||+.+..
T Consensus 156 ~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 156 LEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred HHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 33 24699999999999999 667678999987654
No 457
>PRK09902 hypothetical protein; Provisional
Probab=98.37 E-value=5.8e-06 Score=83.06 Aligned_cols=138 Identities=15% Similarity=0.185 Sum_probs=96.4
Q ss_pred eccCceEEEEEEECCCCcEEEEEEEecC---CCC-HHHHHHHHHHHHHHHhCCCC--Ccceeeeeeecc----CCcEEEE
Q 006004 167 GQGTYSSVYKARDLETGKIVALKKVRFA---NMD-PESVRFMAREIHILRKLDHP--NVMKLEGLVTSR----SGSLYLV 236 (665)
Q Consensus 167 G~G~fg~Vy~a~~~~~g~~vAiK~i~~~---~~~-~~~~~~~~~Ei~iL~~L~Hp--nIV~l~~~~~~~----~~~l~lV 236 (665)
|.||-|.|+.... .|+.|-+|.-... ... +--...+.+|+..|++|..- .+.++. ++... .-.-+||
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 4588888998764 3446888865311 110 22234588999999998532 244444 22211 1235799
Q ss_pred EEeccc--cchhhhcCCC-CCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCc--EEEEeccccee
Q 006004 237 FEYMEH--DLAGLATTPG-IKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGV--LKIGDFGLATT 307 (665)
Q Consensus 237 ~Ey~~g--~ll~~~~~~~-~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~--lKL~DFGlA~~ 307 (665)
+|-++| +|...+.... .+.++.+...++.+|+..|.-||+.|+.|+|+.+.|||++.+|. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 999985 4544443321 24677778899999999999999999999999999999987777 99999987654
No 458
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.34 E-value=8.2e-06 Score=82.37 Aligned_cols=139 Identities=21% Similarity=0.243 Sum_probs=89.5
Q ss_pred CCeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHH-HHHH------HHHHHHHHHhCC---CCCcceeeeeee
Q 006004 158 DAFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPE-SVRF------MAREIHILRKLD---HPNVMKLEGLVT 227 (665)
Q Consensus 158 ~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~-~~~~------~~~Ei~iL~~L~---HpnIV~l~~~~~ 227 (665)
.+|.+++.+-......|.+..- +|+.+++|..+......+ .... ..+++..+.++. .-.+..++.+..
T Consensus 31 ~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e 108 (229)
T PF06176_consen 31 NNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE 108 (229)
T ss_pred CCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence 3799999998888888887764 678899998764332111 1111 234444444442 222233222222
Q ss_pred cc----CCcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCcEEEEecc
Q 006004 228 SR----SGSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGVLKIGDFG 303 (665)
Q Consensus 228 ~~----~~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~lKL~DFG 303 (665)
.. ....+|||||++|--+..+.. +++ .+...|.++|.-||..|++|+|++|.|+++++++ ++++||+
T Consensus 109 kk~~~~~~~~~ll~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~-i~iID~~ 179 (229)
T PF06176_consen 109 KKIFRYTSSYVLLMEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG-IRIIDTQ 179 (229)
T ss_pred eeeccceeEEEEEEEEecCeecccchh----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc-EEEEECc
Confidence 11 123568999999965443321 232 2445677889999999999999999999999655 9999998
Q ss_pred ccee
Q 006004 304 LATT 307 (665)
Q Consensus 304 lA~~ 307 (665)
..+.
T Consensus 180 ~k~~ 183 (229)
T PF06176_consen 180 GKRM 183 (229)
T ss_pred cccc
Confidence 6553
No 459
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.28 E-value=3.1e-06 Score=95.79 Aligned_cols=143 Identities=18% Similarity=0.248 Sum_probs=86.7
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCC---------------------------CCHH-HH----HH------HH
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFAN---------------------------MDPE-SV----RF------MA 205 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~---------------------------~~~~-~~----~~------~~ 205 (665)
..|+.++-|+||+|+. .+|+.||||+.+..- .... .+ +. +.
T Consensus 131 ~PiAsASIaQVH~A~L-~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVL-KSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEe-cCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 5899999999999996 459999999987321 1100 01 11 23
Q ss_pred HHHHHHHhC----CCCCcceeeeeeeccCCcEEEEEEeccccchhh---hcCCCCCCChhHHHHHHHHHHHHHHHHHhCC
Q 006004 206 REIHILRKL----DHPNVMKLEGLVTSRSGSLYLVFEYMEHDLAGL---ATTPGIKFTEPQIKCYMQQLLRGLEHCHSRG 278 (665)
Q Consensus 206 ~Ei~iL~~L----~HpnIV~l~~~~~~~~~~l~lV~Ey~~g~ll~~---~~~~~~~lse~~i~~i~~QIl~aL~~LH~~g 278 (665)
+|..-+.++ ....-+.+=.+|.+-.+.-.|+|||++|--+.. +... .++...+.....++. +..+-..|
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~--g~d~k~ia~~~~~~f--~~q~~~dg 285 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA--GIDRKELAELLVRAF--LRQLLRDG 285 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhc--CCCHHHHHHHHHHHH--HHHHHhcC
Confidence 344444443 222222333333333335589999999833222 2222 234323222222221 22233479
Q ss_pred ccccCCCcccEEEcCCCcEEEEecccceecCCC
Q 006004 279 ILHRDIKGSNLLINNAGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 279 IiHrDLKPeNILld~~g~lKL~DFGlA~~~~~~ 311 (665)
++|.|.+|.||+++.+|.+.+.|||+...+++.
T Consensus 286 ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~ 318 (517)
T COG0661 286 FFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK 318 (517)
T ss_pred ccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence 999999999999999999999999998876543
No 460
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.20 E-value=2.5e-05 Score=78.00 Aligned_cols=128 Identities=26% Similarity=0.346 Sum_probs=91.4
Q ss_pred CCeeEEEEeeccCc-eEEEEEEECCCCcEEEEEEEec---CC-------CCH---------HHHHHHHHHHHHHHhCC--
Q 006004 158 DAFEKIDKIGQGTY-SSVYKARDLETGKIVALKKVRF---AN-------MDP---------ESVRFMAREIHILRKLD-- 215 (665)
Q Consensus 158 ~~y~~~~~LG~G~f-g~Vy~a~~~~~g~~vAiK~i~~---~~-------~~~---------~~~~~~~~Ei~iL~~L~-- 215 (665)
.+++.++.||.|.- |.||+++. +|+.||||+.+. .. ... ....-|..|..+.-+|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 68999999999999 99999986 788999999432 10 000 11234667888877774
Q ss_pred -CCCc--ceeeeeeecc-----------------CCcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHH
Q 006004 216 -HPNV--MKLEGLVTSR-----------------SGSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCH 275 (665)
Q Consensus 216 -HpnI--V~l~~~~~~~-----------------~~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH 275 (665)
+.++ |++++++.-. .....||.||+.... .++. .-+.+|++-|..+|
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~----~~~~~~~~dl~~~~ 181 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQI----RDIPQMLRDLKILH 181 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccch----hHHHHHHHHHHHHH
Confidence 4455 8888877311 112467888876543 2232 33567788889999
Q ss_pred hCCccccCCCcccEEEcCCCcEEEEecccc
Q 006004 276 SRGILHRDIKGSNLLINNAGVLKIGDFGLA 305 (665)
Q Consensus 276 ~~gIiHrDLKPeNILld~~g~lKL~DFGlA 305 (665)
..||+-+|+++.|.. .=||+|||.+
T Consensus 182 k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 182 KLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HCCeeeccCcccccc-----CCEEEecccC
Confidence 999999999999987 3489999964
No 461
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.18 E-value=1.5e-05 Score=81.31 Aligned_cols=133 Identities=19% Similarity=0.139 Sum_probs=79.6
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCC--cceeeeeeeccCCcEEEEEEecc
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPN--VMKLEGLVTSRSGSLYLVFEYME 241 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~Hpn--IV~l~~~~~~~~~~l~lV~Ey~~ 241 (665)
..||+|..+.||+. .|..+++|..+... . ...+.+|.++++.+..-. +.+.+.+.... +..++|||+++
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-~---~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~-~~~glv~e~i~ 77 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-D---KETIKREFDASRKVFSLGIPTPHPFDLVEDG-GRLGLIYELIV 77 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC-C---HHHHHHHHHHHHHHHHcCCCCCceEEEEecC-CeeeeeeeecC
Confidence 57899999999984 24468889876422 2 233578999999985433 35566655443 35789999999
Q ss_pred ccc-hhh----------------------hcC---CCCCCChhHHHHHHHHH----------HH-HHHHHH----hCCcc
Q 006004 242 HDL-AGL----------------------ATT---PGIKFTEPQIKCYMQQL----------LR-GLEHCH----SRGIL 280 (665)
Q Consensus 242 g~l-l~~----------------------~~~---~~~~lse~~i~~i~~QI----------l~-aL~~LH----~~gIi 280 (665)
|.. ... +.. ....++. ....+..+| .. ...+|. ...++
T Consensus 78 G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~-~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 156 (226)
T TIGR02172 78 GKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQS-YKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCL 156 (226)
T ss_pred CccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHH-HHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceE
Confidence 851 110 111 0001110 000110000 01 111222 12478
Q ss_pred ccCCCcccEEEcCCCcEEEEeccccee
Q 006004 281 HRDIKGSNLLINNAGVLKIGDFGLATT 307 (665)
Q Consensus 281 HrDLKPeNILld~~g~lKL~DFGlA~~ 307 (665)
|+|+.|.||+++.++ +.|+||+.+..
T Consensus 157 HgD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 157 HGDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred ecCCCCCcEEEcCCC-cEEEechhcCc
Confidence 999999999999988 99999998763
No 462
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.16 E-value=7.3e-06 Score=79.59 Aligned_cols=132 Identities=23% Similarity=0.220 Sum_probs=93.0
Q ss_pred eeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEe
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEY 239 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey 239 (665)
.+..+.|++|++|.||++.+ .|..+|+|+-+.+. ....+..|.++|..+.--++..=+..+. ...+.|||
T Consensus 24 ~~v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~ds----~r~~l~kEakiLeil~g~~~~p~vy~yg----~~~i~me~ 93 (201)
T COG2112 24 LRVEKELAKGTTSVVYLGEW--RGGEVALKVRRRDS----PRRNLEKEAKILEILAGEGVTPEVYFYG----EDFIRMEY 93 (201)
T ss_pred hhhhhhhhcccccEEEEeec--cCceEEEEEecCCc----chhhHHHHHHHHHHhhhcCCCceEEEec----hhhhhhhh
Confidence 45678899999999999997 45689999876433 3456788999999998777754333222 23566999
Q ss_pred ccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCC-cccEEEcCCCcEEEEecccceec
Q 006004 240 MEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIK-GSNLLINNAGVLKIGDFGLATTY 308 (665)
Q Consensus 240 ~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLK-PeNILld~~g~lKL~DFGlA~~~ 308 (665)
+.|-.+..+.... . ++-+..+++.---|-..||-|..|. |..++|..++.+.|+||..|+.-
T Consensus 94 i~G~~L~~~~~~~---~----rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k 156 (201)
T COG2112 94 IDGRPLGKLEIGG---D----RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATFK 156 (201)
T ss_pred hcCcchhhhhhcc---c----HHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhhc
Confidence 9984443332211 1 2334556666556778899999998 66555666669999999999854
No 463
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.14 E-value=1.2e-05 Score=91.05 Aligned_cols=143 Identities=17% Similarity=0.166 Sum_probs=89.4
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCCC-----------------------------HHHHHH------HHHHH
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANMD-----------------------------PESVRF------MAREI 208 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~-----------------------------~~~~~~------~~~Ei 208 (665)
+.||.-+.|.||+|+-+. |+.||||+-+..-.. .+..+. |.+|.
T Consensus 167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 579999999999999655 999999987632100 011111 22232
Q ss_pred H----HHHhCCCCC---cceeeeeeeccCCcEEEEEEecccc---chhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCC
Q 006004 209 H----ILRKLDHPN---VMKLEGLVTSRSGSLYLVFEYMEHD---LAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRG 278 (665)
Q Consensus 209 ~----iL~~L~Hpn---IV~l~~~~~~~~~~l~lV~Ey~~g~---ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~g 278 (665)
+ +.+.+.|-+ -|.+=.+|.+-...-.|+||||+|. .+..+...+ ++...+...+.++..-+ |-..|
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~g--i~~~~i~~~l~~~~~~q--If~~G 321 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRG--ISPHDILNKLVEAYLEQ--IFKTG 321 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcC--CCHHHHHHHHHHHHHHH--HHhcC
Confidence 2 223334555 2223334444334568999999983 333444443 55555555444443322 33458
Q ss_pred ccccCCCcccEEEcC----CCcEEEEecccceecCCC
Q 006004 279 ILHRDIKGSNLLINN----AGVLKIGDFGLATTYDPS 311 (665)
Q Consensus 279 IiHrDLKPeNILld~----~g~lKL~DFGlA~~~~~~ 311 (665)
++|.|-+|.|||++. ++.+.|.|||+...+...
T Consensus 322 ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~ 358 (538)
T KOG1235|consen 322 FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK 358 (538)
T ss_pred CccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence 999999999999994 568999999998876543
No 464
>PLN02876 acyl-CoA dehydrogenase
Probab=98.06 E-value=4.8e-05 Score=91.71 Aligned_cols=146 Identities=25% Similarity=0.386 Sum_probs=91.5
Q ss_pred EEEEeeccCceEEEEEEECCCC--cEEEEEEEecCCCCHHHHHHHHHHHHHHHhCC-CCCc--ceeeeeeecc--CCcEE
Q 006004 162 KIDKIGQGTYSSVYKARDLETG--KIVALKKVRFANMDPESVRFMAREIHILRKLD-HPNV--MKLEGLVTSR--SGSLY 234 (665)
Q Consensus 162 ~~~~LG~G~fg~Vy~a~~~~~g--~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~-HpnI--V~l~~~~~~~--~~~l~ 234 (665)
.+..|+.|.+..+|+......+ ..+++|+....... .....+.+|+.+|+.|. |.+| .+++.++.+. .+..|
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~-~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~f 120 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLL-QSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAF 120 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccC-ccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCce
Confidence 3678899999999998764432 46888876543221 12345789999999995 6665 6777766543 24678
Q ss_pred EEEEeccccchhh------------------------hcCCC----------CC--CChhHHHHHHHH------------
Q 006004 235 LVFEYMEHDLAGL------------------------ATTPG----------IK--FTEPQIKCYMQQ------------ 266 (665)
Q Consensus 235 lV~Ey~~g~ll~~------------------------~~~~~----------~~--lse~~i~~i~~Q------------ 266 (665)
+||||++|..+.. +..-. .+ +...++..|..+
T Consensus 121 lVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~ 200 (822)
T PLN02876 121 YIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPR 200 (822)
T ss_pred EEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCC
Confidence 9999999853210 11100 00 111233332222
Q ss_pred ---HHHHHHHHHh-----------CCccccCCCcccEEEcCC-C-cEEEEecccceec
Q 006004 267 ---LLRGLEHCHS-----------RGILHRDIKGSNLLINNA-G-VLKIGDFGLATTY 308 (665)
Q Consensus 267 ---Il~aL~~LH~-----------~gIiHrDLKPeNILld~~-g-~lKL~DFGlA~~~ 308 (665)
+...+.+|.. ..+||+|+++.|||++.+ + .+-|+||+++..-
T Consensus 201 ~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~G 258 (822)
T PLN02876 201 NPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLG 258 (822)
T ss_pred ChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccC
Confidence 2233556632 249999999999999853 3 4679999998754
No 465
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.02 E-value=5e-05 Score=77.76 Aligned_cols=135 Identities=15% Similarity=0.115 Sum_probs=78.9
Q ss_pred EeeccCc-eEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCC-CCCcceeeeeeeccCCcEEEEEEeccc
Q 006004 165 KIGQGTY-SSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLD-HPNVMKLEGLVTSRSGSLYLVFEYMEH 242 (665)
Q Consensus 165 ~LG~G~f-g~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~~l~lV~Ey~~g 242 (665)
.|-.|.. +.||++... +..+.||+..... ...+.+|+.+++.|. +--+.+++.+.... +..++|||+++|
T Consensus 5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~-~~~~lv~e~i~G 76 (244)
T cd05150 5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP-----TYELEREAERLRWLAGKLPVPEVIDYGSDD-GRAWLLTSAVPG 76 (244)
T ss_pred ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc-----ccchHHHHHHHHHHHhcCCCCeEEEEEecC-CccEEEEEeeCC
Confidence 3444444 789999753 3678888765332 234567999988883 44455677766543 357899999998
Q ss_pred cchhhhc--------------------CC---CCCCChh------HHHHHHH----------------HHHHHHHHH---
Q 006004 243 DLAGLAT--------------------TP---GIKFTEP------QIKCYMQ----------------QLLRGLEHC--- 274 (665)
Q Consensus 243 ~ll~~~~--------------------~~---~~~lse~------~i~~i~~----------------QIl~aL~~L--- 274 (665)
..+.... .. ..++... .....+. .+...+..|
T Consensus 77 ~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 156 (244)
T cd05150 77 VPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEAT 156 (244)
T ss_pred ccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhh
Confidence 5333111 00 0011100 0000000 011111222
Q ss_pred ----HhCCccccCCCcccEEEcCCCcEEEEeccccee
Q 006004 275 ----HSRGILHRDIKGSNLLINNAGVLKIGDFGLATT 307 (665)
Q Consensus 275 ----H~~gIiHrDLKPeNILld~~g~lKL~DFGlA~~ 307 (665)
....++|+|+.|.|||++.++.+.|+||+.|..
T Consensus 157 ~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 157 RPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred CCCcCceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 123489999999999999988888999997753
No 466
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.91 E-value=2.5e-05 Score=93.22 Aligned_cols=204 Identities=21% Similarity=0.201 Sum_probs=137.9
Q ss_pred HHHHHHHHHHHHhCCCCCcceeeeeeeccC--C-cEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhC
Q 006004 201 VRFMAREIHILRKLDHPNVMKLEGLVTSRS--G-SLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSR 277 (665)
Q Consensus 201 ~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~--~-~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~ 277 (665)
+....-|+..+..+.|+|++.++.|-..+. + .+.+..+++....+....+.-...+...++.+..++++||.|+|..
T Consensus 226 i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~ 305 (1351)
T KOG1035|consen 226 IQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSL 305 (1351)
T ss_pred HHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHh
Confidence 334445777788889999999988755432 2 2334557777765555666666789999999999999999999999
Q ss_pred CccccCCCcc---cEEEcCCCcEEEE--ecccceecCCCCCCCcccccccccccCcccccCCcccCc--ccchhhhHHHH
Q 006004 278 GILHRDIKGS---NLLINNAGVLKIG--DFGLATTYDPSQNLPLTSRVVTLWYRAPELLLGATKYGA--AIDMWSAGCIL 350 (665)
Q Consensus 278 gIiHrDLKPe---NILld~~g~lKL~--DFGlA~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~--~sDIWSLG~iL 350 (665)
...|.-|... +-.++.++.+.+. ||+....+..... .....-+..|.++|.... ..+.. ..|+|.+|..+
T Consensus 306 ~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~--~~~~~~~~~~~~~e~~~~-~~~~~~r~~dL~~lgll~ 382 (1351)
T KOG1035|consen 306 SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK--SFSDLLAEIRNADEDLKE-NTAKKSRLTDLWCLGLLL 382 (1351)
T ss_pred ccceeEEecccccccccCccceeecchhhhcccccCCCccc--chhhcCcccccccccccc-ccchhhhhhHHHHHHHHH
Confidence 6666555444 4444556667766 8888776643322 122234566788887764 33333 46999999999
Q ss_pred HHHHhCCCCCCCCChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccC-CcHHHHHHHHHhcccCcC
Q 006004 351 AELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRN-FPQSALALVDKLLTIEPE 429 (665)
Q Consensus 351 yeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~s~~a~dLI~~lL~~DP~ 429 (665)
..+..|..+-.- ...+ ...... ......+++.+|+.-|++
T Consensus 383 ~~~~~~~~i~~~------~~~~---------------------------------~~~l~~~~~~~~~d~~~~~~~~~~~ 423 (1351)
T KOG1035|consen 383 LQLSQGEDISEK------SAVP---------------------------------VSLLDVLSTSELLDALPKCLDEDSE 423 (1351)
T ss_pred hhhhhcCccccc------ccch---------------------------------hhhhccccchhhhhhhhhhcchhhh
Confidence 999887642100 0000 000111 122677899999999999
Q ss_pred CCcCHHHHHhCcCCCCC
Q 006004 430 NRGSAASALRSEFFKTE 446 (665)
Q Consensus 430 ~RpTa~eaL~Hp~f~~~ 446 (665)
+|+.+.++|.|+|.+..
T Consensus 424 ~Rl~~~~ll~~~f~~~~ 440 (1351)
T KOG1035|consen 424 ERLSALELLTHPFLRFP 440 (1351)
T ss_pred hccchhhhhhchhcccc
Confidence 99999999999998643
No 467
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.80 E-value=0.00014 Score=74.29 Aligned_cols=31 Identities=26% Similarity=0.395 Sum_probs=26.3
Q ss_pred CCccccCCCcccEEEcCCCcEEEEeccccee
Q 006004 277 RGILHRDIKGSNLLINNAGVLKIGDFGLATT 307 (665)
Q Consensus 277 ~gIiHrDLKPeNILld~~g~lKL~DFGlA~~ 307 (665)
.+++|+|+.+.|||++.++..-|+||+.+..
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~ 194 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV 194 (235)
T ss_pred ceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence 3589999999999999776667999998754
No 468
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.73 E-value=4.4e-06 Score=101.10 Aligned_cols=257 Identities=13% Similarity=0.012 Sum_probs=162.7
Q ss_pred CCCCeeEEEEeeccCceEEEEEEECCCCcEEEEEEE---ecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeecc-CC
Q 006004 156 RADAFEKIDKIGQGTYSSVYKARDLETGKIVALKKV---RFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSR-SG 231 (665)
Q Consensus 156 ~~~~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i---~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-~~ 231 (665)
+...|++.=-++-|.++..-.-+.+.++ +-+|+. .+.++.+...+.+..|...++...|+++...+.-.... +.
T Consensus 1227 ~~e~~EV~l~i~~~~~~R~k~Lr~kid~--Fk~~I~ke~d~e~LsePlkemll~e~de~~~~~h~~~~~~p~rI~ps~s~ 1304 (2724)
T KOG1826|consen 1227 AMEHSEVNLGISNHFHFRNKWLRSKIDW--FKFSIYKEYDFENLSEPLKEMLLSERDELREAKHYLTEVDPLRIPPSEST 1304 (2724)
T ss_pred HhhhhheeeecccceeeccchHhhhhce--eEEEeehhhhHHHHhhHHHHhhhhhhhhhhhhhceeeecccccCCCCCCh
Confidence 3445666666666665544333333333 334433 34444445555666777777778999988766544433 44
Q ss_pred cEEEEEEeccccch-hhhcCC---CCCCChhHHHHHHHHHHHHHHHHHhC-----CccccCCCcccEEEcCCCcEEEEec
Q 006004 232 SLYLVFEYMEHDLA-GLATTP---GIKFTEPQIKCYMQQLLRGLEHCHSR-----GILHRDIKGSNLLINNAGVLKIGDF 302 (665)
Q Consensus 232 ~l~lV~Ey~~g~ll-~~~~~~---~~~lse~~i~~i~~QIl~aL~~LH~~-----gIiHrDLKPeNILld~~g~lKL~DF 302 (665)
..|++++|+.++.+ ..+.+. ...+.+.-+.+...+.+.+..-+|.. -.+|++||+-|.+|..+..+|++++
T Consensus 1305 ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~ 1384 (2724)
T KOG1826|consen 1305 EEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKG 1384 (2724)
T ss_pred HHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCccccccc
Confidence 57899999986544 444432 22355555666666667888887764 2899999999999999999999999
Q ss_pred ccceecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCChh
Q 006004 303 GLATTYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSED 382 (665)
Q Consensus 303 GlA~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~~~~e~l~kI~~~~g~p~~~ 382 (665)
|+.+...+ ........++++.|+.|++... ..++.++|+|..|+.+|++..|.++| ...+..+.+..- ...
T Consensus 1385 gLdKIknp-~~sf~Gl~l~sp~~v~qli~N~-ik~t~rsdilr~s~~ly~rs~~n~~f-----i~flq~~Lkgii--dn~ 1455 (2724)
T KOG1826|consen 1385 GLDKIKNP-VLSFFGLELCSPIYVLQLIKNE-IKFTKRSDILRRSLSLYLRSDGNAYF-----IFFLQPALKGII--DNH 1455 (2724)
T ss_pred ccccccCc-hHhhhhhhhCCHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHHhcccHHH-----HHHHHHHHcCcc--ccc
Confidence 99983322 2223455577899999997654 66788899999999999999998776 223333322110 000
Q ss_pred HHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCCC
Q 006004 383 YWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFFK 444 (665)
Q Consensus 383 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f~ 444 (665)
+ ......-.|.++-.+...+|-+.-..||.-...+.-+.|.
T Consensus 1456 ----------t-----------f~sIe~l~pgdaNve~~~~Ll~K~~~rp~q~isls~d~~a 1496 (2724)
T KOG1826|consen 1456 ----------T-----------FFSIEKLKPGDANVEALHRLLWKYMERPGQYISLSRDHFA 1496 (2724)
T ss_pred ----------c-----------cccccccCCCcccHHHHHHHHHHhhhcchhhhhccccccc
Confidence 0 0011112244444555556666667788888888777764
No 469
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.58 E-value=0.001 Score=66.66 Aligned_cols=131 Identities=21% Similarity=0.226 Sum_probs=88.6
Q ss_pred EEEeeccCceEEEEEEECCCCcEEEEEEEecCC--------------CCHHHHHHHHHHHHHHHhCC------CCCccee
Q 006004 163 IDKIGQGTYSSVYKARDLETGKIVALKKVRFAN--------------MDPESVRFMAREIHILRKLD------HPNVMKL 222 (665)
Q Consensus 163 ~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~--------------~~~~~~~~~~~Ei~iL~~L~------HpnIV~l 222 (665)
...||+|+.=.||.-- .....+||+++... ......+...+|+.-...+. +.+|.++
T Consensus 6 ~~~i~~G~~R~cy~HP---~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 6 SDLIAQGGERDCYQHP---DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CcccccCCCceEEECC---CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 3578999999999843 34457899987655 11112344566776666665 8899999
Q ss_pred eeeeeccCCcEEEEEEeccc------cchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCC-
Q 006004 223 EGLVTSRSGSLYLVFEYMEH------DLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAG- 295 (665)
Q Consensus 223 ~~~~~~~~~~l~lV~Ey~~g------~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g- 295 (665)
++++++.- -+-+|+|.+.. -++..+...+ .+++ .+.. .|-+-..||-+.+|+.+||+|.||++....
T Consensus 83 ~G~veT~~-G~Glv~e~I~d~dG~~s~TL~~~l~~~-~~~~-~~~~---~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~ 156 (199)
T PF10707_consen 83 YGFVETNL-GLGLVVELIRDADGNISPTLEDYLKEG-GLTE-ELRQ---ALDEFKRYLLDHHIVIRDLNPHNIVVQRRDS 156 (199)
T ss_pred eEEEecCC-ceEEEEEEEECCCCCcCccHHHHHHcC-CccH-HHHH---HHHHHHHHHHHcCCeecCCCcccEEEEecCC
Confidence 99998865 47899999763 1333333333 3555 3333 344455678889999999999999997432
Q ss_pred ---cEEEEec
Q 006004 296 ---VLKIGDF 302 (665)
Q Consensus 296 ---~lKL~DF 302 (665)
.+.|+|-
T Consensus 157 ~~~~lvlIDG 166 (199)
T PF10707_consen 157 GEFRLVLIDG 166 (199)
T ss_pred CceEEEEEeC
Confidence 4777773
No 470
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.45 E-value=0.00091 Score=71.13 Aligned_cols=142 Identities=20% Similarity=0.232 Sum_probs=82.0
Q ss_pred eeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCC--cceeeee-----eeccCCc
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPN--VMKLEGL-----VTSRSGS 232 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~Hpn--IV~l~~~-----~~~~~~~ 232 (665)
...++.|+.|....+|++.. .+| .+++|+.+... . ...+..|++++..|.... +.+++.. +..-.+.
T Consensus 24 ~~~i~~~~~G~~n~~y~v~t-~~~-~~vLK~~~~~~-~---~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~ 97 (307)
T TIGR00938 24 LLSLKGIAEGVENSNYLLTT-DVG-RYILTLYEKRV-K---AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGK 97 (307)
T ss_pred ceeccccCCccccceEEEEe-CCC-cEEEEEecCCC-C---HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCe
Confidence 44567788888889999864 344 58899875421 1 223456777777774222 3343331 1112346
Q ss_pred EEEEEEeccccchh---------------hhcCCCCCCCh--------h---H--HH----------HHHHHHHHHHHHH
Q 006004 233 LYLVFEYMEHDLAG---------------LATTPGIKFTE--------P---Q--IK----------CYMQQLLRGLEHC 274 (665)
Q Consensus 233 l~lV~Ey~~g~ll~---------------~~~~~~~~lse--------~---~--i~----------~i~~QIl~aL~~L 274 (665)
.+++|+|++|.... .+......++. . . .. .....+...++++
T Consensus 98 ~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l 177 (307)
T TIGR00938 98 PACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYL 177 (307)
T ss_pred EEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHH
Confidence 78999999873210 11110001100 0 0 00 0111233345555
Q ss_pred Hh-------CCccccCCCcccEEEcCCCcEEEEeccccee
Q 006004 275 HS-------RGILHRDIKGSNLLINNAGVLKIGDFGLATT 307 (665)
Q Consensus 275 H~-------~gIiHrDLKPeNILld~~g~lKL~DFGlA~~ 307 (665)
.. .+++|+|+++.|||++.++.+.|+||+.+..
T Consensus 178 ~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~ 217 (307)
T TIGR00938 178 DKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT 217 (307)
T ss_pred HhhhhhcCCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence 32 5899999999999999988778999997753
No 471
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.44 E-value=0.001 Score=67.53 Aligned_cols=73 Identities=16% Similarity=0.201 Sum_probs=46.4
Q ss_pred EEEeeccCceEEEEEEECC-CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCC-cceeeeeeeccCCcEEEEEEec
Q 006004 163 IDKIGQGTYSSVYKARDLE-TGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPN-VMKLEGLVTSRSGSLYLVFEYM 240 (665)
Q Consensus 163 ~~~LG~G~fg~Vy~a~~~~-~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~Hpn-IV~l~~~~~~~~~~l~lV~Ey~ 240 (665)
++.|..|-...+|++.... .++.|++|+...... ..-...+|+.+++.+.... ..+++..+. . .+||||+
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~---~~~d~~~E~~~~~~l~~~gl~P~v~~~~~--~---~~l~e~i 74 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE---LIIDRERELRIHKLLSKHGLAPKLYATFQ--N---GLIYEFI 74 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc---ceecHHHHHHHHHHHHhCCCCCeEEEEeC--C---cEEEEee
Confidence 4677788888999997543 356799997653211 1112347888999885333 445544322 2 4799999
Q ss_pred ccc
Q 006004 241 EHD 243 (665)
Q Consensus 241 ~g~ 243 (665)
+|.
T Consensus 75 ~G~ 77 (235)
T cd05157 75 PGR 77 (235)
T ss_pred CCC
Confidence 874
No 472
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.39 E-value=0.00067 Score=70.14 Aligned_cols=132 Identities=23% Similarity=0.302 Sum_probs=75.2
Q ss_pred eeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCc-ceeeeeeeccCCcEEEEEEeccccc
Q 006004 166 IGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNV-MKLEGLVTSRSGSLYLVFEYMEHDL 244 (665)
Q Consensus 166 LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnI-V~l~~~~~~~~~~l~lV~Ey~~g~l 244 (665)
+..|-...+|+.. .+++.+++|......... .+ ...+|..+++.+....+ .+++... . -++||||++|..
T Consensus 4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~-~~-~r~~E~~~l~~l~~~g~~P~~i~~~--~---~~~v~e~i~G~~ 74 (256)
T TIGR02721 4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKAL-GV-DRQREYQILQALSALGLAPKPILVN--E---HWLLVEWLEGEV 74 (256)
T ss_pred CCCcCcCCeEEEE--eCCccEEEeeCCcccccc-cC-cHHHHHHHHHHHHhcCCCCceEEEe--C---CEEEEEeccCcc
Confidence 4557778899887 356678898754321110 01 24678999998854333 3333322 1 268999999843
Q ss_pred hhh------------------hcCC---CCCCCh-hHHHHHHHHH---------HHHHHHHHh--------CCccccCCC
Q 006004 245 AGL------------------ATTP---GIKFTE-PQIKCYMQQL---------LRGLEHCHS--------RGILHRDIK 285 (665)
Q Consensus 245 l~~------------------~~~~---~~~lse-~~i~~i~~QI---------l~aL~~LH~--------~gIiHrDLK 285 (665)
+.. +... +.+++. ..+..+..++ ...+..+-. ..++|+|+.
T Consensus 75 ~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~ 154 (256)
T TIGR02721 75 ITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVH 154 (256)
T ss_pred cccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCC
Confidence 221 1111 111111 1222332222 111222211 258999999
Q ss_pred cccEEEcCCCcEEEEeccccee
Q 006004 286 GSNLLINNAGVLKIGDFGLATT 307 (665)
Q Consensus 286 PeNILld~~g~lKL~DFGlA~~ 307 (665)
|.|||++.++ +.|+||..|..
T Consensus 155 ~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 155 AYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred cCcEEEeCCC-CEEEeccccCc
Confidence 9999999877 78999998764
No 473
>PRK10593 hypothetical protein; Provisional
Probab=97.38 E-value=0.0024 Score=67.83 Aligned_cols=78 Identities=17% Similarity=0.215 Sum_probs=54.2
Q ss_pred eeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCC---CCcceeeeeeecc--CCcEE
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDH---PNVMKLEGLVTSR--SGSLY 234 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~H---pnIV~l~~~~~~~--~~~l~ 234 (665)
-.-.+.||.|..+.||.... .++ .+++|..+. .. ....+..|...|+.|.- -.+.++++++... .+..+
T Consensus 16 ~~~~~~i~~G~~~~vy~~~~-~~~-~~~~k~~~~-~~---~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~ 89 (297)
T PRK10593 16 LSRVECISEQPYAALWALYD-SQG-NPMPLMARS-FS---TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDV 89 (297)
T ss_pred hheeeecCCccceeEEEEEc-CCC-CEEEEEecc-cc---cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeE
Confidence 34567899999999999864 233 477777432 11 12357889999998843 3577777766543 34679
Q ss_pred EEEEecccc
Q 006004 235 LVFEYMEHD 243 (665)
Q Consensus 235 lV~Ey~~g~ 243 (665)
||||+++|.
T Consensus 90 LVmE~i~G~ 98 (297)
T PRK10593 90 LLLERLRGV 98 (297)
T ss_pred EEEeccCCE
Confidence 999999874
No 474
>PRK05231 homoserine kinase; Provisional
Probab=97.32 E-value=0.0033 Score=67.08 Aligned_cols=31 Identities=29% Similarity=0.475 Sum_probs=26.7
Q ss_pred CCccccCCCcccEEEcCCCcEEEEeccccee
Q 006004 277 RGILHRDIKGSNLLINNAGVLKIGDFGLATT 307 (665)
Q Consensus 277 ~gIiHrDLKPeNILld~~g~lKL~DFGlA~~ 307 (665)
.|++|+|++|.|||++.+...-|+||+.+..
T Consensus 187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred cccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 3899999999999999766668999998753
No 475
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.31 E-value=0.001 Score=66.10 Aligned_cols=100 Identities=25% Similarity=0.206 Sum_probs=77.8
Q ss_pred HHHHHHHHhCCC-CCcceeeeeeeccCCcEEEEEEecccc-chhhh--cCCCCCCChhHHHHHHHHHHHHHHHHHh---C
Q 006004 205 AREIHILRKLDH-PNVMKLEGLVTSRSGSLYLVFEYMEHD-LAGLA--TTPGIKFTEPQIKCYMQQLLRGLEHCHS---R 277 (665)
Q Consensus 205 ~~Ei~iL~~L~H-pnIV~l~~~~~~~~~~l~lV~Ey~~g~-ll~~~--~~~~~~lse~~i~~i~~QIl~aL~~LH~---~ 277 (665)
..|.-+|+.+.+ +++.+++|++- . ++|.||+... ++... ...-...++..+..++.+++..+++|+. .
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG----~-~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG----R-FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC----C-EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 358888999966 69999999762 3 5789999853 32211 1111246889999999999999999998 3
Q ss_pred CccccCCCcccEEEcCCCcEEEEecccceecC
Q 006004 278 GILHRDIKGSNLLINNAGVLKIGDFGLATTYD 309 (665)
Q Consensus 278 gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~ 309 (665)
.+.-.|++++|+-|+++|.+|++|...+...+
T Consensus 82 ~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVNDDGRLKLIDLDDVFVED 113 (188)
T ss_pred cEEEeecchHHeEEeCCCcEEEEechhcchhH
Confidence 47779999999999999999999999876543
No 476
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.30 E-value=0.00028 Score=74.64 Aligned_cols=137 Identities=18% Similarity=0.206 Sum_probs=95.5
Q ss_pred CeeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHH--------------------HHHHHHHHHHHHhCC-CC
Q 006004 159 AFEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPES--------------------VRFMAREIHILRKLD-HP 217 (665)
Q Consensus 159 ~y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~--------------------~~~~~~Ei~iL~~L~-Hp 217 (665)
-+.+...||-|--+.||.+-+ ..|+.+++|+-++....-.. .-...+|...|+.|. |-
T Consensus 93 v~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g 171 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG 171 (465)
T ss_pred hhhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence 366788999999999999986 56889999976543211100 112457888888883 33
Q ss_pred C-cceeeeeeeccCCcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccCCCcccEEEcCCCc
Q 006004 218 N-VMKLEGLVTSRSGSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRDIKGSNLLINNAGV 296 (665)
Q Consensus 218 n-IV~l~~~~~~~~~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrDLKPeNILld~~g~ 296 (665)
. +.+.+++ +.-++|||++.|-.+..... ...+..+...|..-+--|-.+|+||+|..-=||+|++++.
T Consensus 172 fpVPkpiD~-----~RH~Vvmelv~g~Pl~~v~~------v~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~ 240 (465)
T KOG2268|consen 172 FPVPKPIDH-----NRHCVVMELVDGYPLRQVRH------VEDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDK 240 (465)
T ss_pred CCCCCcccc-----cceeeHHHhhcccceeeeee------cCChHHHHHHHHHHHHHHHHcCceecccchheeEEecCCC
Confidence 2 3344442 24589999999854433321 1123445556666677788999999999999999999999
Q ss_pred EEEEeccccee
Q 006004 297 LKIGDFGLATT 307 (665)
Q Consensus 297 lKL~DFGlA~~ 307 (665)
++++||--...
T Consensus 241 i~vIDFPQmvS 251 (465)
T KOG2268|consen 241 IVVIDFPQMVS 251 (465)
T ss_pred EEEeechHhhc
Confidence 99999975543
No 477
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.26 E-value=0.0035 Score=67.50 Aligned_cols=143 Identities=22% Similarity=0.303 Sum_probs=98.8
Q ss_pred eEEEEeeccCceEEEEEEECCCCcEEEEEEEecCC----------------------CCHH-HHHH-HHHHHHHHHhCCC
Q 006004 161 EKIDKIGQGTYSSVYKARDLETGKIVALKKVRFAN----------------------MDPE-SVRF-MAREIHILRKLDH 216 (665)
Q Consensus 161 ~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~----------------------~~~~-~~~~-~~~Ei~iL~~L~H 216 (665)
++-..|..|--+.||.|.. .+|..+|||+++..- .++. -++- ...|+.-|++|..
T Consensus 147 ~inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~ 225 (520)
T KOG2270|consen 147 EINGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN 225 (520)
T ss_pred ecccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence 3446788899999999985 678889999886211 0111 1221 2357778888865
Q ss_pred CCcceeeeeeeccCCcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHH-hCCccccCCCcccEEEcCCC
Q 006004 217 PNVMKLEGLVTSRSGSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCH-SRGILHRDIKGSNLLINNAG 295 (665)
Q Consensus 217 pnIV~l~~~~~~~~~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH-~~gIiHrDLKPeNILld~~g 295 (665)
..|.-..-... . .-.|||+|+..+-+..-.-....++...+..+-.|++.-+.-|- ..++||.||.-=|+|+-+ |
T Consensus 226 aGIP~PePIlL-k--~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Lyhd-G 301 (520)
T KOG2270|consen 226 AGIPCPEPILL-K--NHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYHD-G 301 (520)
T ss_pred cCCCCCCceee-e--cceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEEC-C
Confidence 44432222221 1 23799999997555443334457888888888888888777764 569999999999999876 7
Q ss_pred cEEEEecccceec
Q 006004 296 VLKIGDFGLATTY 308 (665)
Q Consensus 296 ~lKL~DFGlA~~~ 308 (665)
.+.|+|-+-+...
T Consensus 302 ~lyiIDVSQSVE~ 314 (520)
T KOG2270|consen 302 KLYIIDVSQSVEH 314 (520)
T ss_pred EEEEEEccccccC
Confidence 8999998876543
No 478
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.25 E-value=0.0042 Score=65.37 Aligned_cols=140 Identities=16% Similarity=0.171 Sum_probs=81.6
Q ss_pred eEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCC--cceeeee-----eeccCCcE
Q 006004 161 EKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPN--VMKLEGL-----VTSRSGSL 233 (665)
Q Consensus 161 ~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~Hpn--IV~l~~~-----~~~~~~~l 233 (665)
.-++.|..|....+|++.. ++..+++|+... .. ...+..|+.++..|.+.. +.+++.. +..-.+..
T Consensus 17 ~~i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~--~~---~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~ 89 (296)
T cd05153 17 LSFEGISAGIENTNYFVTT--DSGRYVLTLFEK--VS---AEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKP 89 (296)
T ss_pred hheecccCccccceEEEEe--CCCcEEEEEcCC--CC---hHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCce
Confidence 3466788888889999864 334689998753 11 234567888888874322 4444331 11113456
Q ss_pred EEEEEeccccchhh---------------hcCCCCCCCh--------hHH------------HHHHHHHHHHHHHHHh--
Q 006004 234 YLVFEYMEHDLAGL---------------ATTPGIKFTE--------PQI------------KCYMQQLLRGLEHCHS-- 276 (665)
Q Consensus 234 ~lV~Ey~~g~ll~~---------------~~~~~~~lse--------~~i------------~~i~~QIl~aL~~LH~-- 276 (665)
++||+|++|..... +......+.. ... ......+..++.++..
T Consensus 90 ~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~ 169 (296)
T cd05153 90 AALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFD 169 (296)
T ss_pred EEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhh
Confidence 89999999843211 1100000000 000 0011112233444443
Q ss_pred -----CCccccCCCcccEEEcCCCcEEEEeccccee
Q 006004 277 -----RGILHRDIKGSNLLINNAGVLKIGDFGLATT 307 (665)
Q Consensus 277 -----~gIiHrDLKPeNILld~~g~lKL~DFGlA~~ 307 (665)
.+++|+|+.|.|||++.++.+.|+||+.+..
T Consensus 170 ~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 170 PSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred hhcCCCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 4799999999999999987789999997753
No 479
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.22 E-value=0.0047 Score=68.24 Aligned_cols=78 Identities=22% Similarity=0.175 Sum_probs=53.1
Q ss_pred EEEEeeccCceEEEEEEECCCCcEEEEEEEecC-C---C-CHHHHHHHHHHHHHHHhCC---CCCcceeeeeeeccCCcE
Q 006004 162 KIDKIGQGTYSSVYKARDLETGKIVALKKVRFA-N---M-DPESVRFMAREIHILRKLD---HPNVMKLEGLVTSRSGSL 233 (665)
Q Consensus 162 ~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~-~---~-~~~~~~~~~~Ei~iL~~L~---HpnIV~l~~~~~~~~~~l 233 (665)
..+.||.|.+..||++.+...++.|+||.-... . . .+-...+...|.+.|+.+. -.++.+++.+.. . ..
T Consensus 30 ~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~--~-~~ 106 (401)
T PRK09550 30 TAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDE--E-LA 106 (401)
T ss_pred eeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECC--C-CC
Confidence 357899999999999998544368999975311 0 0 0123455677888888862 345777777532 2 45
Q ss_pred EEEEEeccc
Q 006004 234 YLVFEYMEH 242 (665)
Q Consensus 234 ~lV~Ey~~g 242 (665)
++||||+++
T Consensus 107 ~lVME~L~~ 115 (401)
T PRK09550 107 VTVMEDLSD 115 (401)
T ss_pred EEEEecCCC
Confidence 899999875
No 480
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.13 E-value=0.0013 Score=73.29 Aligned_cols=172 Identities=23% Similarity=0.319 Sum_probs=114.6
Q ss_pred HHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhCCccccC
Q 006004 204 MAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSRGILHRD 283 (665)
Q Consensus 204 ~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~gIiHrD 283 (665)
+.--.++++.+.|+|....+++.........+|||+++.++.+...... +-... ++ .+|+.|-
T Consensus 29 ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~~Sled~~~~~~--l~~~s-------~~-------~~~~~~~- 91 (725)
T KOG1093|consen 29 ILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYTMSLEDILKTGN--LKDES-------LL-------AHGVLHL- 91 (725)
T ss_pred HhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhccchHHHHHhcc--cchhh-------hc-------cccccee-
Confidence 5567789999999999999998776655788999999987776655433 21111 11 2233332
Q ss_pred CCcccEEEcCCCcEEEEecccceecCCCCCCCcccccccccccCcccccCCcccCcccchhhhHHHHHHHHhCCCCCCCC
Q 006004 284 IKGSNLLINNAGVLKIGDFGLATTYDPSQNLPLTSRVVTLWYRAPELLLGATKYGAAIDMWSAGCILAELFAGKPIMPGR 363 (665)
Q Consensus 284 LKPeNILld~~g~lKL~DFGlA~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~sDIWSLG~iLyeLltG~~pF~g~ 363 (665)
|| ++++| ..... | | ...++++||||+|.++.++..|...++..
T Consensus 92 ----~~-------~~~td----~~~t~--------------~--~------~~~~pKsdVwsl~~i~~el~L~~~l~~~~ 134 (725)
T KOG1093|consen 92 ----NI-------IYITD----HFLTK--------------Y--P------SPIGPKSDVWSLGFIILELYLGISLEAEL 134 (725)
T ss_pred ----hh-------hhccc----ccccc--------------C--C------CCCCcchhhhhHHHHHHHHHHhhHHHHHH
Confidence 22 23333 00000 0 1 11225999999999999999999999988
Q ss_pred ChHHHHHHHHHhcCCCChhHHhhhccccccCCCCCCcchhhhhhhccCCcHHHHHHHHHhcccCcCCCcCHHHHHhCcCC
Q 006004 364 TEVEQMHKIFKLCGSPSEDYWRKSKSAHATSFKPQQPYKRKVLETFRNFPQSALALVDKLLTIEPENRGSAASALRSEFF 443 (665)
Q Consensus 364 ~~~e~l~kI~~~~g~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~s~~a~dLI~~lL~~DP~~RpTa~eaL~Hp~f 443 (665)
+..+++..|.+..-.+....-- .+.-......+.....+..+|+...|..||...+++.++-|
T Consensus 135 ~~s~~l~~i~k~~~~d~~~~~~-----------------a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~ 197 (725)
T KOG1093|consen 135 TESEYLEILLKYYTDDQELLST-----------------AMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSF 197 (725)
T ss_pred HHHHHHHHHHHhccCchhHHHH-----------------HHHHHHHHhhhHhHHHHhccCCccccccccchhHHhcCccH
Confidence 8888888887754333221100 00001122466778899999999999999999999999999
Q ss_pred CCC
Q 006004 444 KTE 446 (665)
Q Consensus 444 ~~~ 446 (665)
.+.
T Consensus 198 ~ev 200 (725)
T KOG1093|consen 198 TEV 200 (725)
T ss_pred HHH
Confidence 754
No 481
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.13 E-value=0.0029 Score=66.92 Aligned_cols=73 Identities=23% Similarity=0.289 Sum_probs=45.4
Q ss_pred EEEeeccCceEEEEEEECC------CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCc-ceeeeeeeccCCcEEE
Q 006004 163 IDKIGQGTYSSVYKARDLE------TGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNV-MKLEGLVTSRSGSLYL 235 (665)
Q Consensus 163 ~~~LG~G~fg~Vy~a~~~~------~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnI-V~l~~~~~~~~~~l~l 235 (665)
++.|..|--..||++.... +++.|++|+..... .......+|..+++.+....+ .+++.++. . .+
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~---~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~--~---~~ 74 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV---ELLIDRERELVVFARLSERNLGPKLYGIFP--N---GR 74 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC---cceechHHHHHHHHHHHhCCCCCceEEEeC--C---Cc
Confidence 4556667777899987533 25789999865432 122234678888888853333 34555442 2 35
Q ss_pred EEEecccc
Q 006004 236 VFEYMEHD 243 (665)
Q Consensus 236 V~Ey~~g~ 243 (665)
|+||++|.
T Consensus 75 v~e~i~G~ 82 (302)
T cd05156 75 IEEFIPSR 82 (302)
T ss_pred hhheeCCC
Confidence 89998874
No 482
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.09 E-value=0.0068 Score=64.91 Aligned_cols=148 Identities=22% Similarity=0.288 Sum_probs=85.3
Q ss_pred eeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCC--CCcceeeeeeeccC-CcEEEE
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDH--PNVMKLEGLVTSRS-GSLYLV 236 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~H--pnIV~l~~~~~~~~-~~l~lV 236 (665)
..++..+-.|.--.+|...+. ++.++|. ...............+|..+++.+.- .-+...++++.... +..|.|
T Consensus 27 ~~~v~~~~~G~sn~t~~~~~~--~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v 103 (321)
T COG3173 27 LLIVEEISGGWSNDTFRLGDT--GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYV 103 (321)
T ss_pred CceeeeccCCcccceEEEecC--CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEE
Confidence 444555533333445665543 7788888 43222334556677889999988732 23334455555544 567999
Q ss_pred EEeccccchhhhcCC-------------------------C-------CCCChhHHHHHHHHH--------------HHH
Q 006004 237 FEYMEHDLAGLATTP-------------------------G-------IKFTEPQIKCYMQQL--------------LRG 270 (665)
Q Consensus 237 ~Ey~~g~ll~~~~~~-------------------------~-------~~lse~~i~~i~~QI--------------l~a 270 (665)
|+|++|......... + ..+...++..+..+. ..-
T Consensus 104 ~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~ 183 (321)
T COG3173 104 MEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRL 183 (321)
T ss_pred EEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHH
Confidence 999998311100000 0 001111222222222 112
Q ss_pred HHHHHhC--------CccccCCCcccEEEcCCCcEEEEecccceecCC
Q 006004 271 LEHCHSR--------GILHRDIKGSNLLINNAGVLKIGDFGLATTYDP 310 (665)
Q Consensus 271 L~~LH~~--------gIiHrDLKPeNILld~~g~lKL~DFGlA~~~~~ 310 (665)
..||+.+ .++|+|+.+.||||+..+-+=|+||+++..-++
T Consensus 184 ~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP 231 (321)
T COG3173 184 IKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDP 231 (321)
T ss_pred HHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccCCc
Confidence 2333332 489999999999999999999999999886543
No 483
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.60 E-value=0.022 Score=59.94 Aligned_cols=31 Identities=19% Similarity=0.274 Sum_probs=25.9
Q ss_pred CccccCCCcccEEEcCCCc-EEEEecccceec
Q 006004 278 GILHRDIKGSNLLINNAGV-LKIGDFGLATTY 308 (665)
Q Consensus 278 gIiHrDLKPeNILld~~g~-lKL~DFGlA~~~ 308 (665)
.++|+|++|.|||+++++. .-|+||+.+..-
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG 217 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKVG 217 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence 4899999999999997555 569999987653
No 484
>PLN02236 choline kinase
Probab=96.53 E-value=0.03 Score=60.84 Aligned_cols=140 Identities=13% Similarity=0.152 Sum_probs=81.4
Q ss_pred eeEEEEeeccCceEEEEEEECC----CCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCc-ceeeeeeeccCCcEE
Q 006004 160 FEKIDKIGQGTYSSVYKARDLE----TGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNV-MKLEGLVTSRSGSLY 234 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~----~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnI-V~l~~~~~~~~~~l~ 234 (665)
...+..|-.|-.-.+|++.... .++.|++|+..... ...+.+ .+|+.+++.+..-++ .++++.+. .+
T Consensus 38 ~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t--~~~idR-~~E~~~~~~l~~~gl~P~~~~~~~--~g--- 109 (344)
T PLN02236 38 ALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV--ELFFDR-DDEIRTFECMSRHGQGPRLLGRFP--NG--- 109 (344)
T ss_pred cEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC--Ceeech-HHHHHHHHHHHHcCCCCceEEEEC--Cc---
Confidence 3344566558888999987432 24679999775432 122222 579999998854444 35555543 22
Q ss_pred EEEEeccccchhh------------------hcCCC---C--CCChhHHHHHHHHHH-----------------HHHHHH
Q 006004 235 LVFEYMEHDLAGL------------------ATTPG---I--KFTEPQIKCYMQQLL-----------------RGLEHC 274 (665)
Q Consensus 235 lV~Ey~~g~ll~~------------------~~~~~---~--~lse~~i~~i~~QIl-----------------~aL~~L 274 (665)
.|++|+++..+.. +.+.. . .....++..++.++. ..+..|
T Consensus 110 ~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L 189 (344)
T PLN02236 110 RVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLL 189 (344)
T ss_pred eEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHH
Confidence 5799988743221 11111 0 111233434432221 111111
Q ss_pred ----H----hCCccccCCCcccEEEcC-CCcEEEEeccccee
Q 006004 275 ----H----SRGILHRDIKGSNLLINN-AGVLKIGDFGLATT 307 (665)
Q Consensus 275 ----H----~~gIiHrDLKPeNILld~-~g~lKL~DFGlA~~ 307 (665)
. ...++|+|+++.|||+++ ++.+.|+||..|..
T Consensus 190 ~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 190 EKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred HHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 1 236899999999999986 47899999998764
No 485
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.47 E-value=0.022 Score=60.19 Aligned_cols=29 Identities=31% Similarity=0.526 Sum_probs=25.7
Q ss_pred CCccccCCCcccEEEcCCCcEEEEecccce
Q 006004 277 RGILHRDIKGSNLLINNAGVLKIGDFGLAT 306 (665)
Q Consensus 277 ~gIiHrDLKPeNILld~~g~lKL~DFGlA~ 306 (665)
.+++|+|+.+.|||++. +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 57999999999999998 678999999764
No 486
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.46 E-value=0.031 Score=60.38 Aligned_cols=149 Identities=19% Similarity=0.241 Sum_probs=82.3
Q ss_pred cCCccCCCCCeeEEEEeeccCceEEEEEEECCC---CcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCc-ceeeee
Q 006004 150 KGWQPRRADAFEKIDKIGQGTYSSVYKARDLET---GKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNV-MKLEGL 225 (665)
Q Consensus 150 ~~~~~~~~~~y~~~~~LG~G~fg~Vy~a~~~~~---g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnI-V~l~~~ 225 (665)
.+|.-...+..++. .|-.|-.-.+|++..... +..|++|+..... ...+. -.+|+.+++.+..-++ .+++++
T Consensus 7 ~~w~~~~~~~i~i~-~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t--~~~Id-R~~E~~il~~l~~~gl~P~~l~~ 82 (330)
T PLN02421 7 KGWSDLDDSDFSVE-RISGGITNLLLKVSVKEENGNEVSVTVRLFGPNT--DYVID-RERELQAIKYLSAAGFGAKLLGV 82 (330)
T ss_pred CccccCCcCceEEE-EeCCcccceEEEEEecCCCCCCceEEEEEecCCc--CeEec-hHHHHHHHHHHHhcCCCCceeEE
Confidence 34443333445554 454477778999875432 3478899775322 11122 2578899999865444 455555
Q ss_pred eeccCCcEEEEEEeccccchh------------------hhcCCCCC----C-ChhHHHHHHHHHH--------------
Q 006004 226 VTSRSGSLYLVFEYMEHDLAG------------------LATTPGIK----F-TEPQIKCYMQQLL-------------- 268 (665)
Q Consensus 226 ~~~~~~~l~lV~Ey~~g~ll~------------------~~~~~~~~----l-se~~i~~i~~QIl-------------- 268 (665)
+. ++ +|.+|++|..+. .+.....+ + ....+..|+.++-
T Consensus 83 ~~--~G---~i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~ 157 (330)
T PLN02421 83 FG--NG---MIQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYE 157 (330)
T ss_pred eC--Cc---EeehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhc
Confidence 42 32 588998874321 11111100 1 1223333333321
Q ss_pred --------HHHHHHH----hC----CccccCCCcccEEEcC-CCcEEEEeccccee
Q 006004 269 --------RGLEHCH----SR----GILHRDIKGSNLLINN-AGVLKIGDFGLATT 307 (665)
Q Consensus 269 --------~aL~~LH----~~----gIiHrDLKPeNILld~-~g~lKL~DFGlA~~ 307 (665)
.-+..+. .. -++|.||.+.|||+++ ++.++|+||..|..
T Consensus 158 ~~~~~~l~~~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 158 TISFEELRDEIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred ccCHHHHHHHHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 1111111 11 2799999999999975 57899999998754
No 487
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.11 E-value=0.059 Score=59.73 Aligned_cols=76 Identities=18% Similarity=0.182 Sum_probs=50.6
Q ss_pred EEEEeeccCceEEEEEEECCCCcEEEEEEEecCCC--C---HHHHHHHHHHHHHHHhCC---CCCcceeeeeeeccCCcE
Q 006004 162 KIDKIGQGTYSSVYKARDLETGKIVALKKVRFANM--D---PESVRFMAREIHILRKLD---HPNVMKLEGLVTSRSGSL 233 (665)
Q Consensus 162 ~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~--~---~~~~~~~~~Ei~iL~~L~---HpnIV~l~~~~~~~~~~l 233 (665)
..+.||.|....||++.+. +..|+||.-..... . +-...+...|...|+.+. -.++.+++.+..+ .-
T Consensus 36 ~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded---~~ 110 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRT---MA 110 (418)
T ss_pred eEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC---CC
Confidence 4678999999999999873 45689997541111 0 113344455677777663 2477788887653 34
Q ss_pred EEEEEeccc
Q 006004 234 YLVFEYMEH 242 (665)
Q Consensus 234 ~lV~Ey~~g 242 (665)
+++|||+++
T Consensus 111 vlvME~L~~ 119 (418)
T PLN02756 111 LIGMRYLEP 119 (418)
T ss_pred EEEEeecCC
Confidence 789999976
No 488
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.01 E-value=0.065 Score=57.11 Aligned_cols=30 Identities=17% Similarity=0.129 Sum_probs=28.0
Q ss_pred CccccCCCcccEEEcCCCcEEEEeccccee
Q 006004 278 GILHRDIKGSNLLINNAGVLKIGDFGLATT 307 (665)
Q Consensus 278 gIiHrDLKPeNILld~~g~lKL~DFGlA~~ 307 (665)
+++|+|+.+.|||++.++.+-|+||..+..
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 799999999999999999999999998865
No 489
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=95.87 E-value=0.032 Score=60.77 Aligned_cols=75 Identities=19% Similarity=0.238 Sum_probs=47.7
Q ss_pred EeeccCceEEEEEEECCCCcEEEEEEEe----c-CCCCHHHHHHHHHHHHHHHhCC--CC-CcceeeeeeeccCCcEEEE
Q 006004 165 KIGQGTYSSVYKARDLETGKIVALKKVR----F-ANMDPESVRFMAREIHILRKLD--HP-NVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 165 ~LG~G~fg~Vy~a~~~~~g~~vAiK~i~----~-~~~~~~~~~~~~~Ei~iL~~L~--Hp-nIV~l~~~~~~~~~~l~lV 236 (665)
.||.|....||++.+...++.|+||.-. . ....+-...+..-|..+|+.+. .| .+.+++.+ .. . ...+|
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~-D~-e-~~~~v 78 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF-DT-E-MAVTV 78 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE-cc-c-cceeh
Confidence 5799999999999975444689999642 1 1111223445567888887763 34 45556554 22 2 45699
Q ss_pred EEeccc
Q 006004 237 FEYMEH 242 (665)
Q Consensus 237 ~Ey~~g 242 (665)
||+++.
T Consensus 79 MEdL~~ 84 (370)
T TIGR01767 79 MEDLSH 84 (370)
T ss_pred HhhCcc
Confidence 999864
No 490
>PRK12396 5-methylribose kinase; Reviewed
Probab=95.73 E-value=0.039 Score=60.81 Aligned_cols=77 Identities=22% Similarity=0.229 Sum_probs=50.7
Q ss_pred EEEeeccCceEEEEEEECCCCcEEEEEEE----ecCCCCHHHHHHHHHHHHHHHhCC--CC-CcceeeeeeeccCCcEEE
Q 006004 163 IDKIGQGTYSSVYKARDLETGKIVALKKV----RFANMDPESVRFMAREIHILRKLD--HP-NVMKLEGLVTSRSGSLYL 235 (665)
Q Consensus 163 ~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i----~~~~~~~~~~~~~~~Ei~iL~~L~--Hp-nIV~l~~~~~~~~~~l~l 235 (665)
++.||.|.-.-||++.+...++.|+||.- +.....+-...+..-|.++|+.+. .| .+.+++.+ .. . ...+
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~-D~-e-~~~~ 110 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF-DS-V-MNCC 110 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE-Cc-H-HhhH
Confidence 67899999999999998444567999953 211111223455667888888773 34 45556654 22 2 4578
Q ss_pred EEEeccc
Q 006004 236 VFEYMEH 242 (665)
Q Consensus 236 V~Ey~~g 242 (665)
|||+++.
T Consensus 111 vMEdL~~ 117 (409)
T PRK12396 111 VMEDLSD 117 (409)
T ss_pred HHHhCcc
Confidence 9999864
No 491
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=95.63 E-value=0.12 Score=54.77 Aligned_cols=76 Identities=17% Similarity=0.237 Sum_probs=45.8
Q ss_pred eeEEEEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCC---CCCcceeeeeeeccCCcEEEE
Q 006004 160 FEKIDKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLD---HPNVMKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 160 y~~~~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~---HpnIV~l~~~~~~~~~~l~lV 236 (665)
.+..+.|+.|....+|+.. .+++.+.||+-... ....+..|..-|+.|. --.+.+++.+....+ .-|||
T Consensus 19 i~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~-----~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~-~~fLl 90 (288)
T PF03881_consen 19 ITSIEPVSGGDINEAYRLD--TDGGSYFVKVNSES-----GRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDD-DAFLL 90 (288)
T ss_dssp --EEEEE--SSSSEEEEEE--TTS-EEEEEEEEGG-----GCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SS-CCEEE
T ss_pred eeeeEecCCCChhheEEEE--CCCccEEEEecChh-----hHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecC-CceEE
Confidence 4566789999999999987 57788999987622 2334667888787773 345667777665544 44899
Q ss_pred EEecccc
Q 006004 237 FEYMEHD 243 (665)
Q Consensus 237 ~Ey~~g~ 243 (665)
|||++..
T Consensus 91 le~l~~~ 97 (288)
T PF03881_consen 91 LEFLEMG 97 (288)
T ss_dssp EE-----
T ss_pred EEeecCC
Confidence 9998743
No 492
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=95.58 E-value=0.046 Score=54.71 Aligned_cols=30 Identities=37% Similarity=0.521 Sum_probs=21.7
Q ss_pred CccccCCCcccEEE-cCCCcEEEEeccccee
Q 006004 278 GILHRDIKGSNLLI-NNAGVLKIGDFGLATT 307 (665)
Q Consensus 278 gIiHrDLKPeNILl-d~~g~lKL~DFGlA~~ 307 (665)
-+.|.||.+.|||+ +.++.++|+||..|..
T Consensus 144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY 174 (211)
T ss_dssp EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence 58999999999999 8889999999998864
No 493
>PRK06148 hypothetical protein; Provisional
Probab=95.54 E-value=0.23 Score=61.52 Aligned_cols=31 Identities=26% Similarity=0.479 Sum_probs=26.5
Q ss_pred CCccccCCCcccEEEcCCC--cEE-EEeccccee
Q 006004 277 RGILHRDIKGSNLLINNAG--VLK-IGDFGLATT 307 (665)
Q Consensus 277 ~gIiHrDLKPeNILld~~g--~lK-L~DFGlA~~ 307 (665)
.++||.|+.+.|||++.++ .+. |+|||.+..
T Consensus 203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred cceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 4799999999999999875 555 999998764
No 494
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.47 E-value=0.05 Score=58.84 Aligned_cols=85 Identities=18% Similarity=0.210 Sum_probs=60.2
Q ss_pred CCcceeeeeeeccCCcEEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHHhC-CccccCCCcccEEEcCCC
Q 006004 217 PNVMKLEGLVTSRSGSLYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCHSR-GILHRDIKGSNLLINNAG 295 (665)
Q Consensus 217 pnIV~l~~~~~~~~~~l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH~~-gIiHrDLKPeNILld~~g 295 (665)
++..+++-+-.++...+|++|++-.+.+...- .-..+++..++.+.+..|+-+... ..-|||+.-.||||+ +|
T Consensus 285 ~~~e~~~vv~~de~~y~yl~~kdhgt~is~ik-----~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~G 358 (488)
T COG5072 285 VFLETLKVVSLDETLYLYLHFKDHGTPISIIK-----ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EG 358 (488)
T ss_pred hhhhcceEEecCCceEEEEEEecCCceeeeee-----cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cC
Confidence 44444333322344466778887766544321 124567888888888777777655 689999999999999 89
Q ss_pred cEEEEeccccee
Q 006004 296 VLKIGDFGLATT 307 (665)
Q Consensus 296 ~lKL~DFGlA~~ 307 (665)
++.|+||-+++.
T Consensus 359 nvtLIDfklsRl 370 (488)
T COG5072 359 NVTLIDFKLSRL 370 (488)
T ss_pred ceEEEEeeeeec
Confidence 999999999984
No 495
>PTZ00384 choline kinase; Provisional
Probab=95.17 E-value=0.17 Score=55.86 Aligned_cols=77 Identities=19% Similarity=0.285 Sum_probs=43.6
Q ss_pred EEEEeeccCceEEEEEEECCC-CcEEEEEEE--ec-CCCCHHHHHHHHHHHHHHHhCCCCCc-ceeeeeeeccCCcEEEE
Q 006004 162 KIDKIGQGTYSSVYKARDLET-GKIVALKKV--RF-ANMDPESVRFMAREIHILRKLDHPNV-MKLEGLVTSRSGSLYLV 236 (665)
Q Consensus 162 ~~~~LG~G~fg~Vy~a~~~~~-g~~vAiK~i--~~-~~~~~~~~~~~~~Ei~iL~~L~HpnI-V~l~~~~~~~~~~l~lV 236 (665)
.++.|..|-...+|++..... +..+.+|.+ +. .....-.+. -.+|+.+++.|...++ .++++.+. -++|
T Consensus 54 ~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~Id-R~~E~~i~~~Ls~~glgP~l~~~f~-----~g~l 127 (383)
T PTZ00384 54 EIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVID-NDLQYNIAKLLGDNNFGPKIIGRFG-----DFTI 127 (383)
T ss_pred EEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEec-cHHHHHHHHHHHhCCCCCeEEEecC-----CEEE
Confidence 345665588889999975432 223333321 11 111111122 2569999999965555 55666553 2699
Q ss_pred EEeccccc
Q 006004 237 FEYMEHDL 244 (665)
Q Consensus 237 ~Ey~~g~l 244 (665)
.||++|..
T Consensus 128 ~efIeGr~ 135 (383)
T PTZ00384 128 QEWVEGNT 135 (383)
T ss_pred EEEecccc
Confidence 99999843
No 496
>PTZ00296 choline kinase; Provisional
Probab=94.58 E-value=0.36 Score=54.36 Aligned_cols=84 Identities=13% Similarity=0.184 Sum_probs=49.9
Q ss_pred CCccCCCCCeeEEEEeeccCceEEEEEEECCC--------CcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcc-e
Q 006004 151 GWQPRRADAFEKIDKIGQGTYSSVYKARDLET--------GKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVM-K 221 (665)
Q Consensus 151 ~~~~~~~~~y~~~~~LG~G~fg~Vy~a~~~~~--------g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV-~ 221 (665)
+|.....++. .++.|-.|-.-.+|++..... ++.|.+++.-... ...+ .-..|..+++.+..-.|- +
T Consensus 99 ~W~~~~~~~I-~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~t--e~lI-dR~~E~~v~~~ls~~gi~P~ 174 (442)
T PTZ00296 99 EWRRFTEDDV-RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDV--DELY-NPISEFEVYKTMSKYRIAPQ 174 (442)
T ss_pred ccccCCcccE-EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCc--ccee-CHHHHHHHHHHHHHCCCCCc
Confidence 4443233345 566776677778999875421 4678888764321 1112 234688888888644443 4
Q ss_pred eeeeeeccCCcEEEEEEecccc
Q 006004 222 LEGLVTSRSGSLYLVFEYMEHD 243 (665)
Q Consensus 222 l~~~~~~~~~~l~lV~Ey~~g~ 243 (665)
+++.+. . +.|.||++|.
T Consensus 175 l~~~f~--g---g~I~efi~g~ 191 (442)
T PTZ00296 175 LLNTFS--G---GRIEEWLYGD 191 (442)
T ss_pred eEEEeC--C---CEEEEeeCCc
Confidence 555542 2 4678999874
No 497
>PRK11768 serine/threonine protein kinase; Provisional
Probab=94.57 E-value=0.6 Score=50.25 Aligned_cols=70 Identities=21% Similarity=0.187 Sum_probs=41.1
Q ss_pred cCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCC--CCccee---ee--eeeccCCcEEEEEEecc
Q 006004 169 GTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDH--PNVMKL---EG--LVTSRSGSLYLVFEYME 241 (665)
Q Consensus 169 G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~H--pnIV~l---~~--~~~~~~~~l~lV~Ey~~ 241 (665)
+.-..||++.. .+|..|++|+.+..... ...+..|+.++..|.. -.++.. -+ ++. -++..+.|+++++
T Consensus 36 s~eN~vy~v~~-~~~~~~vlKv~r~~~~~---~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~-~~g~~~~l~~~~~ 110 (325)
T PRK11768 36 SYENRVYQFGD-EDGRRVVAKFYRPERWS---DAQILEEHAFALELAEAEIPVVAPLAFNGQTLHE-HQGFRFALFPRRG 110 (325)
T ss_pred cccceEEEEec-CCCCEEEEEEcCcccCC---HHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEE-ECCEEEEEEeeeC
Confidence 45567999874 45677999987644322 3345567777777631 112221 11 111 1346788999988
Q ss_pred cc
Q 006004 242 HD 243 (665)
Q Consensus 242 g~ 243 (665)
|.
T Consensus 111 G~ 112 (325)
T PRK11768 111 GR 112 (325)
T ss_pred CC
Confidence 73
No 498
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=94.56 E-value=0.55 Score=50.82 Aligned_cols=136 Identities=21% Similarity=0.268 Sum_probs=77.5
Q ss_pred EEeeccCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCC------cceeeeeeecc-CC--cEE
Q 006004 164 DKIGQGTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPN------VMKLEGLVTSR-SG--SLY 234 (665)
Q Consensus 164 ~~LG~G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~Hpn------IV~l~~~~~~~-~~--~l~ 234 (665)
..|.+ .--.||++.. .+|+ +++|+.+.. ... ..+..|+..|+.|.-.. |..+-+-.... .+ ..+
T Consensus 32 ~~l~s-~eN~~f~~~~-~~g~-~iLki~~~~-~~~---~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a 104 (331)
T COG2334 32 RGLNS-EENSNFRVQT-EDGR-YILKIYRPG-WTR---AEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPA 104 (331)
T ss_pred ccccc-ccCceEEEEe-cCCC-eEEEEecCC-CCH---HHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeE
Confidence 34444 5567899875 3444 499988765 333 33566888888873211 22222211111 23 678
Q ss_pred EEEEeccccchhh----------------hcC--CCCC---------CChh----H---------HHHHHHHHHHHHHHH
Q 006004 235 LVFEYMEHDLAGL----------------ATT--PGIK---------FTEP----Q---------IKCYMQQLLRGLEHC 274 (665)
Q Consensus 235 lV~Ey~~g~ll~~----------------~~~--~~~~---------lse~----~---------i~~i~~QIl~aL~~L 274 (665)
-|++|++|..+.. +.. ++.+ ..+. . -.....++...++.+
T Consensus 105 ~lf~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~ 184 (331)
T COG2334 105 ALFEYLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRL 184 (331)
T ss_pred EEEEecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHH
Confidence 8999999854431 000 0101 1111 0 011233444445544
Q ss_pred Hh--------CC--ccccCCCcccEEEcCCCc-EEEEecccce
Q 006004 275 HS--------RG--ILHRDIKGSNLLINNAGV-LKIGDFGLAT 306 (665)
Q Consensus 275 H~--------~g--IiHrDLKPeNILld~~g~-lKL~DFGlA~ 306 (665)
.+ .+ |||+|+.|.|||++.+.. +.++||+-+.
T Consensus 185 ~~~~~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 185 LARLPAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred HhhchhhCCcccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence 43 24 999999999999998874 8999999765
No 499
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=93.21 E-value=0.39 Score=48.95 Aligned_cols=115 Identities=17% Similarity=0.219 Sum_probs=71.9
Q ss_pred cCceEEEEEEECCCCcEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCcceeeeeeeccCCcEEEEEEeccccchhhh
Q 006004 169 GTYSSVYKARDLETGKIVALKKVRFANMDPESVRFMAREIHILRKLDHPNVMKLEGLVTSRSGSLYLVFEYMEHDLAGLA 248 (665)
Q Consensus 169 G~fg~Vy~a~~~~~g~~vAiK~i~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~~l~lV~Ey~~g~ll~~~ 248 (665)
++-++.-.+...- | ...+|+++.-...-. ...+..+..++.++. .|++|.. +....+-+++|+|-.-
T Consensus 73 ~gNsTl~~~kt~i-G-~L~lKKi~slp~~~~-~~~y~nky~v~Armh--GilrL~N---Dn~~~yGvIlE~Cy~~----- 139 (308)
T PF07387_consen 73 NGNSTLLIGKTKI-G-PLFLKKIRSLPCCIN-DALYFNKYRVFARMH--GILRLKN---DNNYKYGVILERCYKI----- 139 (308)
T ss_pred CCceEEEEecccc-c-hhhhhhccCCCcccc-hhhhhhhhhHHHHhh--heeEeec---CCCceeEEEEeeccCc-----
Confidence 4555555554333 4 356676653322211 223567888888863 5777763 2334577899998521
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHHh--CCccccCCCcccEEEcCCCcEEEEeccc
Q 006004 249 TTPGIKFTEPQIKCYMQQLLRGLEHCHS--RGILHRDIKGSNLLINNAGVLKIGDFGL 304 (665)
Q Consensus 249 ~~~~~~lse~~i~~i~~QIl~aL~~LH~--~gIiHrDLKPeNILld~~g~lKL~DFGl 304 (665)
.. + ...++..=+.+|.-.|+ .+.+|+|..|+||+-|..|.+||.|-+.
T Consensus 140 ---~i-~----~~N~i~agi~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~ 189 (308)
T PF07387_consen 140 ---KI-N----FSNFITAGIKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPVC 189 (308)
T ss_pred ---cc-c----hhHHHHHhHHHHHHhhccCCCeecCCCChhheeecCCCCEEecChhh
Confidence 00 0 11222222466777884 3799999999999999999999999874
No 500
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=91.16 E-value=0.49 Score=52.17 Aligned_cols=61 Identities=20% Similarity=0.071 Sum_probs=37.4
Q ss_pred EEEEEEeccccchhhhcCCCCCCChhHHHHHHHHHHHHHHHHH-hCCccccCCCcccEEEcCC
Q 006004 233 LYLVFEYMEHDLAGLATTPGIKFTEPQIKCYMQQLLRGLEHCH-SRGILHRDIKGSNLLINNA 294 (665)
Q Consensus 233 l~lV~Ey~~g~ll~~~~~~~~~lse~~i~~i~~QIl~aL~~LH-~~gIiHrDLKPeNILld~~ 294 (665)
..|+-+|+.|-........ ...+|...+.++.-...||.-|- -.+.+|.|++|.|||+.-+
T Consensus 320 ~vl~E~~~~Gl~v~~~v~~-~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~ 381 (565)
T KOG1236|consen 320 LVLVETYERGLSVLRFVKW-KSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFN 381 (565)
T ss_pred ceeeeeccccccHHhhhhc-ccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEec
Confidence 4566677776433333322 23456556666655555554433 4579999999999999643
Done!