BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006006
(665 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255584969|ref|XP_002533196.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223526994|gb|EEF29188.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 669
Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/678 (71%), Positives = 569/678 (83%), Gaps = 22/678 (3%)
Query: 1 MAALQRIVQS--SGGSGYGSSRA-------ADVAVPDQFPAGLRVLVVDDDITCLRILEQ 51
MAALQR+ S + S Y S + ADVAV DQFPAGLRVLVVDDD TCLRILEQ
Sbjct: 1 MAALQRVASSVSATASNYSSCKGNGVVTATADVAVSDQFPAGLRVLVVDDDTTCLRILEQ 60
Query: 52 MLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI- 110
MLRRCLY+VTTCSQA VAL++LRERKGCFDVVLSDVHMPDMDGFKLLEH+GLEMDLPVI
Sbjct: 61 MLRRCLYHVTTCSQAKVALNLLRERKGCFDVVLSDVHMPDMDGFKLLEHVGLEMDLPVIM 120
Query: 111 --TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 168
DGR SAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK+W+ENKE E+SGSLE+ D
Sbjct: 121 MSADGRTSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKKWHENKEIEHSGSLEDNDR 180
Query: 169 HKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQ 228
HKRG+++ EY SSVNEGTEG K Q++R ++K+EDDGE +SDDPST+KKPRVVWSVELHQ
Sbjct: 181 HKRGNEDAEYTSSVNEGTEGVLKGQKRRSNSKDEDDGEPDSDDPSTSKKPRVVWSVELHQ 240
Query: 229 QFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGG 288
QFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH LQKFRLYLKRL+GV+QQGG
Sbjct: 241 QFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH-----LQKFRLYLKRLSGVAQQGG 295
Query: 289 ITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPTGNLVTAVDQPA 348
I+++FC P+++NVKL SLGRFDIQALAASGQIPPQTLAALHAEL GRPTG+LVT +DQP
Sbjct: 296 ISSTFCGPMDSNVKLNSLGRFDIQALAASGQIPPQTLAALHAELFGRPTGSLVTTMDQPT 355
Query: 349 LLQATLQGPKCIPADHGVAFGQQLVKCQSNVPENLPQSIISVDDASTGFGVWASNSLGAV 408
LLQA+ Q PKCIP +HGV FGQ +VKC S + ++ PQ+++SV++ S+G+G W SNSLG V
Sbjct: 356 LLQASRQSPKCIPVEHGVTFGQPIVKCSSGISKHFPQNMVSVEEVSSGYGAWPSNSLGTV 415
Query: 409 ASTSNLGGLNPQNGNMLMDILHQQQQKQQNQQSQQQSTLSETSRSISVQPSCLVVPSRSS 468
++NLGG+ QNGNMLMDI HQQQ++ QQ QQQ +L++ SRSI+VQPSCLVVPS+SS
Sbjct: 416 GPSTNLGGMTTQNGNMLMDIFHQQQKQ---QQPQQQQSLADPSRSINVQPSCLVVPSQSS 472
Query: 469 ASFQAGNSPASVNQSCSFNRGAVVDYSLLSSQSNNSSLNMGQISDGDIKTTAVITGYLAP 528
A FQAGNSPASVNQS +FNR V+DYSLLSSQSNNS+LN+G I +GD+KTT + GY AP
Sbjct: 473 ACFQAGNSPASVNQS-NFNRNVVIDYSLLSSQSNNSALNIGHIPEGDLKTTGAVNGYSAP 531
Query: 529 GSLSPSASSCSVTADNTSSQQVQNSNIAFRAARQVPGLVSNVGDIQGSYGAKSGEVFDLG 588
GSLSP ASSCSV AD+ +QVQN +AF A RQ+P L N+ +IQGSYG +S ++ D G
Sbjct: 532 GSLSPPASSCSVNADSGVPRQVQNPTLAFGAVRQLPALSPNIFNIQGSYGVRSDDILDQG 591
Query: 589 S-LRNHGFMGKGNCIPSRLAVDEFESPMNNLNYGNIYLDNNANKVKEEPNLEFVENAKVG 647
+N GF+GKG CIPSR AVDEFE+P +NL++G +Y++NN NKVK+EPN++F + ++VG
Sbjct: 592 PFFKNLGFVGKGTCIPSRFAVDEFETPSSNLSHGKLYVENNDNKVKQEPNIDFTDTSRVG 651
Query: 648 IPMYQQYAPNDLMSVFTD 665
IP+ QQY PNDLMSVFT+
Sbjct: 652 IPVLQQYPPNDLMSVFTE 669
>gi|359472591|ref|XP_002281291.2| PREDICTED: two-component response regulator ARR2-like [Vitis
vinifera]
Length = 643
Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/650 (74%), Positives = 559/650 (86%), Gaps = 13/650 (2%)
Query: 1 MAALQRIVQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNV 60
MAAL ++ S G GS +A DV V DQFPAGLRVLVVDDD+TCL+ILEQMLRRCLY+V
Sbjct: 1 MAALLKVPPQSSGGTNGSCKA-DVVVSDQFPAGLRVLVVDDDVTCLKILEQMLRRCLYHV 59
Query: 61 TTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSA 117
TTCSQA +AL+ILRE+KGCFD+VLSDVHMPDMDG+KLLEH+GLEMDLPVI DGR SA
Sbjct: 60 TTCSQATIALNILREKKGCFDIVLSDVHMPDMDGYKLLEHVGLEMDLPVIMMSADGRTSA 119
Query: 118 VMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIE 177
VMRGIRHGACDYLIKPIREEELKNIWQHVVRK+WNENKEHE+SGSLE+ D HKRG ++ E
Sbjct: 120 VMRGIRHGACDYLIKPIREEELKNIWQHVVRKKWNENKEHEHSGSLEDNDRHKRGGEDAE 179
Query: 178 YASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL 237
YASSVNEG EG K Q+KR +K+EDDGELE++DPST+KKPRVVWSVELHQQFVSAVNQL
Sbjct: 180 YASSVNEGAEGILKGQKKRRDSKDEDDGELENEDPSTSKKPRVVWSVELHQQFVSAVNQL 239
Query: 238 GIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQ-GGITNSFCAP 296
GIDKAVPKRILELMNVPGLTRENVASHLQ KFRLYLKRL+GV+QQ GGI NSFC P
Sbjct: 240 GIDKAVPKRILELMNVPGLTRENVASHLQ-----KFRLYLKRLSGVAQQQGGIPNSFCGP 294
Query: 297 IETNVKLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPTGNLV-TAVDQPALLQATLQ 355
+E NVKLGSLGRFDIQALAASGQIPPQTLAAL AELLGRPT NLV A+DQPALLQA+LQ
Sbjct: 295 VEPNVKLGSLGRFDIQALAASGQIPPQTLAALQAELLGRPTSNLVLPAMDQPALLQASLQ 354
Query: 356 GPKCIPADHGVAFGQQLVKCQSNVPENLPQSIISVDDASTGFGVWASNSLGAVASTSNLG 415
GPKCIP +HGVAFGQ LVKCQ+N+ ++ P +++S +D +GFG W SNSLG V ++ +LG
Sbjct: 355 GPKCIPVEHGVAFGQPLVKCQTNISKHFPPTVVSTEDVPSGFGAWPSNSLGTVGTSGSLG 414
Query: 416 GLNPQNGNMLMDILHQQQQKQQNQQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQAGN 475
GL+ QN N+LMD+LHQQQQ QQ Q QQQ+ + E SRSI+VQPSCLVVPSR+SASFQAGN
Sbjct: 415 GLSAQNNNILMDMLHQQQQHQQ--QQQQQAVIPEPSRSINVQPSCLVVPSRTSASFQAGN 472
Query: 476 SPASVNQSCSFNRGAVVDYSLLSSQSNNSSLNMGQISDGDIKTTAVITGYLAPGSLSPSA 535
SPASVNQ+CSFNR AV+DYSLL+ QSNNSSL++GQISDGD+K T V+ G+ APGS+SPS
Sbjct: 473 SPASVNQNCSFNRNAVIDYSLLTPQSNNSSLSVGQISDGDLKNTTVLGGFSAPGSISPSV 532
Query: 536 SSCSVTADNTSSQQVQNSNIAFRAARQVPGLVSNVGDIQGSYGAKSGEVFDLGSLRNHGF 595
SSCSV A N++++ VQNS + F A RQ+PG+VSN+ DIQGSYGA+SGEV D G LRN GF
Sbjct: 533 SSCSVNAGNSTTRPVQNSTVTFGAPRQLPGVVSNICDIQGSYGARSGEVLDQGLLRNLGF 592
Query: 596 MGKGNCIPSRLAVDEFESPMNNLNYGNIYLDNNANKVKEEPNLEFVENAK 645
+GKG IPSR AVDE ESP++NLN G +Y +N N+VK+EPNL+++ENA+
Sbjct: 593 VGKGTSIPSRFAVDEPESPISNLNNGKVYGENEGNRVKQEPNLDYMENAR 642
>gi|224111430|ref|XP_002315852.1| type-b response regulator [Populus trichocarpa]
gi|222864892|gb|EEF02023.1| type-b response regulator [Populus trichocarpa]
Length = 663
Score = 939 bits (2427), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/674 (70%), Positives = 561/674 (83%), Gaps = 20/674 (2%)
Query: 1 MAALQRIVQSSGGSG--YGSSRAA--DVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRC 56
MAALQR+ S S YGS + A D+ DQFPAGLRVLVVDDDITCLR+LE+ML RC
Sbjct: 1 MAALQRVASSLSTSASSYGSCKGAGADLMFSDQFPAGLRVLVVDDDITCLRLLEKMLCRC 60
Query: 57 LYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDG 113
LYNVTTCSQA AL +LRERKGCFDVVLSDVHMPDMDGFKLLE +GLEMDLPVI DG
Sbjct: 61 LYNVTTCSQATAALKLLRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDLPVIMMSADG 120
Query: 114 RVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGS 173
R SAVMRGIRHGACDYLIKPIREEELKNIWQHV+RK+WNENKE E+SGS E+ D +KRG+
Sbjct: 121 RTSAVMRGIRHGACDYLIKPIREEELKNIWQHVIRKKWNENKEQEHSGSFEDNDWYKRGN 180
Query: 174 DEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSA 233
D+ E ASSVNEG EG K Q+KR AKEEDD ELE DDPS +KKPRVVWSVELHQQFVSA
Sbjct: 181 DDTENASSVNEGAEGVLKGQKKRNIAKEEDDNELEIDDPSASKKPRVVWSVELHQQFVSA 240
Query: 234 VNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSF 293
VNQLGIDKAVPKRILELMNVPGLTRENVASH LQKFRLYLKRL+GV+QQGGI+N+F
Sbjct: 241 VNQLGIDKAVPKRILELMNVPGLTRENVASH-----LQKFRLYLKRLSGVAQQGGISNTF 295
Query: 294 CAPIETNVKLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPTGNLVTAVDQPALLQAT 353
C P+++NVK+ LGRFDIQALAAS QIPPQTLAALHAEL GRPTG+LVT VDQPALLQA+
Sbjct: 296 CGPLDSNVKVNPLGRFDIQALAASSQIPPQTLAALHAELFGRPTGSLVTTVDQPALLQAS 355
Query: 354 LQGPKCIPADHGVAFGQQLVKCQSNVPENLPQSIISVDDASTGFGVWASNSLGAVASTSN 413
+QGPKCIP +HGVAFGQ LVKCQ+N+ ++ P+++ISV+D ++GFG W SNS+G V S+SN
Sbjct: 356 MQGPKCIPVEHGVAFGQPLVKCQTNISKHFPRNVISVEDVASGFGAWPSNSVGTVGSSSN 415
Query: 414 LGGLNPQNGNMLMDILHQQQQKQQNQQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQA 473
LGG+N QN NMLMDI QQ++Q QQ QQS+LSE SRSI+VQPSCLVVPS+S A+FQA
Sbjct: 416 LGGMNSQNSNMLMDI---LQQQKQQQQPLQQSSLSEPSRSINVQPSCLVVPSQSPATFQA 472
Query: 474 GNSPASVNQSCSFNRGAVVDYSLLSSQSNNSSLNMGQISDGDIKTTAVITGYLAPGSLSP 533
GNSPASV+Q+CS+NR ++DYSLLS+QSNNSSLN+GQI +GD+KTT V +GY S+SP
Sbjct: 473 GNSPASVDQNCSYNRSTMIDYSLLSAQSNNSSLNIGQILNGDLKTTGV-SGYSGSVSISP 531
Query: 534 SASSCSVTADNTSSQQVQNSNIAFRAARQVPGLVSNVGDIQGSYGAKSGEVFDLGSLRNH 593
S CSV DNT SQQ ++S +A RA RQ+PGLV N+ ++QGSY A+S EV D LRN
Sbjct: 532 -LSPCSVDPDNT-SQQGRSSTMAIRAVRQLPGLVPNISNLQGSYSARSSEVLDQRPLRNL 589
Query: 594 GFMGKGNCIPSRLAVDEFESPMNNLNYGNIYLDNNANKVKEEPNLEFVENAKVGIPMYQQ 653
GF+ K IPSRLAVDEFES M++L++ Y++ + NKVK+EPN+E+++NA+VGIP+ QQ
Sbjct: 590 GFVAKCTSIPSRLAVDEFESTMSSLDHEKSYMEISGNKVKQEPNIEYMDNARVGIPILQQ 649
Query: 654 Y--APNDLMSVFTD 665
AP+DLMSVFT+
Sbjct: 650 LPPAPSDLMSVFTE 663
>gi|298103720|emb|CBM42561.1| putative B-type response regulator 16 [Populus x canadensis]
Length = 663
Score = 922 bits (2382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/674 (70%), Positives = 551/674 (81%), Gaps = 20/674 (2%)
Query: 1 MAALQRIVQSSGGSGYGSSRA----ADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRC 56
MAALQR+ S SG AD+ DQFPAGLRVLVVDDDITCLR+LE+ML RC
Sbjct: 1 MAALQRVASSLSTSGSSYGSCKGAGADLMFSDQFPAGLRVLVVDDDITCLRLLEKMLCRC 60
Query: 57 LYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDG 113
LYNVTTCSQA AL +LRERKGCFDVVLSDVHMPDMDGFKLLE +GLEMDLPVI DG
Sbjct: 61 LYNVTTCSQATAALKLLRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDLPVIMMSADG 120
Query: 114 RVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGS 173
R SAVMRGI+HGACDYLIKPIREEELKNIWQHV+RK+WNENKE E+SGS E+ D +KRG+
Sbjct: 121 RTSAVMRGIKHGACDYLIKPIREEELKNIWQHVIRKKWNENKEQEHSGSFEDNDWYKRGN 180
Query: 174 DEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSA 233
D+ E ASSVNEG EG K Q+KR AKEEDD ELE DDPS +KKPRVVWSVELHQQFVSA
Sbjct: 181 DDTENASSVNEGAEGVLKGQKKRNIAKEEDDNELEIDDPSASKKPRVVWSVELHQQFVSA 240
Query: 234 VNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSF 293
VNQLGID+AVPKRILELMNVPGLTRENVASH LQKFRLYLKRL+GV+QQGGI+N+F
Sbjct: 241 VNQLGIDEAVPKRILELMNVPGLTRENVASH-----LQKFRLYLKRLSGVAQQGGISNTF 295
Query: 294 CAPIETNVKLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPTGNLVTAVDQPALLQAT 353
C P+++NVK+ LGRFDIQALAAS QIPPQTLAALHAEL GRPTG+LVT VDQPALLQA+
Sbjct: 296 CGPLDSNVKVNPLGRFDIQALAASSQIPPQTLAALHAELFGRPTGSLVTTVDQPALLQAS 355
Query: 354 LQGPKCIPADHGVAFGQQLVKCQSNVPENLPQSIISVDDASTGFGVWASNSLGAVASTSN 413
+QGPKCIP +HGVAFGQ L KCQSN+ ++ P+++ISV+D ++GFG W SNS+G V S+SN
Sbjct: 356 MQGPKCIPVEHGVAFGQPLAKCQSNISKHFPRNVISVEDVASGFGAWPSNSVGTVGSSSN 415
Query: 414 LGGLNPQNGNMLMDILHQQQQKQQNQQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQA 473
LGG+N QN MLMDI QQ++Q QQ QQS+LSE S SI+VQPSCLVVPS+S A+FQA
Sbjct: 416 LGGMNSQNSTMLMDI---LQQQKQQQQPLQQSSLSEPSCSINVQPSCLVVPSQSPATFQA 472
Query: 474 GNSPASVNQSCSFNRGAVVDYSLLSSQSNNSSLNMGQISDGDIKTTAVITGYLAPGSLSP 533
GNSPASV+QSCS+NR ++DYSLLS+QSNNS LN+GQI +GD+KTT V + Y S+SP
Sbjct: 473 GNSPASVDQSCSYNRSTMIDYSLLSAQSNNSLLNIGQILNGDLKTTGV-SRYSGSVSISP 531
Query: 534 SASSCSVTADNTSSQQVQNSNIAFRAARQVPGLVSNVGDIQGSYGAKSGEVFDLGSLRNH 593
S CSV DNT SQQ ++S +A RA RQ+PGLV N+ + QGSY A+S EV D LRN
Sbjct: 532 -LSPCSVDPDNT-SQQGRSSTMAIRAVRQLPGLVPNISNFQGSYSARSSEVLDQRPLRNL 589
Query: 594 GFMGKGNCIPSRLAVDEFESPMNNLNYGNIYLDNNANKVKEEPNLEFVENAKVGIPMYQQ 653
GF+ IPSRLAVDEFES M++L++ Y++ + NKVK+EPN+EF++NA+VGIPM QQ
Sbjct: 590 GFVANCTSIPSRLAVDEFESTMSSLDHEKSYMEISGNKVKQEPNIEFMDNARVGIPMLQQ 649
Query: 654 Y--APNDLMSVFTD 665
AP+DLMSVFT+
Sbjct: 650 LPPAPSDLMSVFTE 663
>gi|298103718|emb|CBM42560.1| putative B-type response regulator 15 [Populus x canadensis]
Length = 671
Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/683 (67%), Positives = 540/683 (79%), Gaps = 30/683 (4%)
Query: 1 MAALQRIVQSSGGSG--YGSSRAA--DVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRC 56
MAALQR+ S G S YGS + A DV V DQFPAGLRVLVVDDDITCLR+LE+M RRC
Sbjct: 1 MAALQRVAPSLGTSASTYGSCKGAGADVIVSDQFPAGLRVLVVDDDITCLRLLEKMPRRC 60
Query: 57 LYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDG 113
LY+VTTCSQA AL +LRERKGCFDVVLSDVHMPDMDGFKLLE +GLEMDLPVI DG
Sbjct: 61 LYHVTTCSQATAALKLLRERKGCFDVVLSDVHMPDMDGFKLLELVGLEMDLPVIMMSADG 120
Query: 114 RVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGS 173
R SAVMRGI HGACDYLIKPIREEELKNIWQHV+RK+WNENKE E+SGS E+ D HKRG+
Sbjct: 121 RTSAVMRGISHGACDYLIKPIREEELKNIWQHVIRKKWNENKEQEHSGSFEDNDRHKRGN 180
Query: 174 DEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSA 233
D E ASSV+EG EG K Q+KR AK+EDD ELE+DDPS ++KPRVVWSVELHQQFVSA
Sbjct: 181 DA-ENASSVSEGAEGVLKGQKKRSIAKDEDDAELENDDPSASRKPRVVWSVELHQQFVSA 239
Query: 234 VNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSF 293
VN LGIDKAVPKRILELMNVPGLTRENVASHLQ KFRLYLKRL+GV+QQGGI+N F
Sbjct: 240 VNHLGIDKAVPKRILELMNVPGLTRENVASHLQ-----KFRLYLKRLSGVAQQGGISNPF 294
Query: 294 CAPIETNVKLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPTGNLVTAVDQPALLQAT 353
C +++NVKL LGRFDIQ LAASGQIPPQTLAA HAEL G P G +VT VDQPALLQA+
Sbjct: 295 CGLLDSNVKLNPLGRFDIQVLAASGQIPPQTLAAPHAELFGHPAGGMVTTVDQPALLQAS 354
Query: 354 LQGPKCIPADHGVAFGQQLVKCQSNVPENLPQSIISVDDASTGFGVWASNSLGAVASTSN 413
+QGPKCIPA+HG+AFGQ L KCQ+N+ ++ PQ+++S ++ +TGF W SNS+G V SN
Sbjct: 355 VQGPKCIPAEHGMAFGQPLGKCQTNMSKHFPQNVVSAEEVATGFVAWPSNSVGTVGPISN 414
Query: 414 LGGLNPQNGNMLMDILHQQQQKQQNQQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQA 473
LGG++ +N NMLMD++ QQ++Q QQS +L E SR I+VQPSCLVVPS+SSA+FQA
Sbjct: 415 LGGMSSKNSNMLMDVV---QQQKQQQQSPHLPSLPEPSRIINVQPSCLVVPSQSSATFQA 471
Query: 474 GNSPASVNQSCSFNRGAVVDYSLLSSQSNNSSLNMGQISDGDIKTTAVITGYLAPGSLSP 533
GNSPASVNQ+CS++R ++DYSLLS QSNNSSLN+GQIS GD+KTT V +
Sbjct: 472 GNSPASVNQNCSYSRSPMIDYSLLSPQSNNSSLNIGQISHGDLKTTGVSGYSGS--GSIS 529
Query: 534 SASSCSVTADNTSSQQVQNSNIAFRAARQVPGLVSNVGDIQGSYGAKSGEVFDLGSLRNH 593
SSCSV DNT SQQ Q+S + RAARQ+PGL N+ + QGSYGAKS EV D G LRN
Sbjct: 530 PLSSCSVNPDNT-SQQGQSSTMTIRAARQLPGLGPNISNFQGSYGAKSSEVLDQGPLRNL 588
Query: 594 GFMGKGNCIPSRLAVDEFESPMNNLNYGNIYLDNNANK---------VKEEPNLEFVENA 644
GF+GK IPSRLAVDEFES M+NL + +Y++ N NK VK+EPN+EF++NA
Sbjct: 589 GFVGKCTSIPSRLAVDEFESTMSNLEHEKLYMETNGNKVKQEPNGNAVKQEPNVEFMDNA 648
Query: 645 KVGIPMYQQYAPN--DLMSVFTD 665
KV IP+ Q PN DLMSVF +
Sbjct: 649 KVLIPILPQLPPNTSDLMSVFKE 671
>gi|343407540|gb|AEM23771.1| RRB1 type-b response regulator [Nicotiana tabacum]
Length = 654
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/648 (59%), Positives = 486/648 (75%), Gaps = 20/648 (3%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D FP GLRVLVVDDDI CLRILEQMLR+C Y+VTTC+QA VAL++LRER+G FDVVLSDV
Sbjct: 17 DTFPVGLRVLVVDDDIVCLRILEQMLRKCKYSVTTCTQATVALNLLRERRGSFDVVLSDV 76
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLP+I DGR + VMRG++HGACDYLIKPIR+EELKNIWQ
Sbjct: 77 HMPDMDGFKLLELVGLEMDLPIIMMSGDGRTNLVMRGVQHGACDYLIKPIRDEELKNIWQ 136
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HVVRK+ + +KE E SGSL++ D HKRG+D+ E ASSV EG + K Q+K+ AKEED+
Sbjct: 137 HVVRKKCSFSKEPEYSGSLDDNDRHKRGNDDAECASSVIEGADRVLKPQKKKRDAKEEDE 196
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
E+E+DDP+T KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH
Sbjct: 197 TEMENDDPTTAKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 256
Query: 265 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQ 323
LQKFRLYLKRL+GV+ QQGG +++C PIE N KLGSLGRFDIQALAASGQIPP+
Sbjct: 257 -----LQKFRLYLKRLSGVAQQQGGFPSTYCGPIEQNPKLGSLGRFDIQALAASGQIPPE 311
Query: 324 TLAALHAELLGRPTGNLV-TAVDQPALLQATLQGPKCIPADHGVAFGQQLVKCQSNV--P 380
TL ALHAELLGR +GNLV +V+QP LLQA+LQ KCIP DH VA+GQ L+KC ++ P
Sbjct: 312 TLTALHAELLGRSSGNLVLPSVEQPDLLQASLQQAKCIPVDHVVAYGQPLMKCPPSITNP 371
Query: 381 ENLPQSIISVDDASTGFGVWASNSLGAVASTSNLGGLNPQNGNMLMDIL---HQQQQKQQ 437
+ L Q +S +D +GFG W + ++ V S SNL GL + NMLM ++ Q Q++QQ
Sbjct: 372 KLLSQPTMSAEDVHSGFGSWRAKNICMVPS-SNLTGLAAPDSNMLMAMMQHQQQWQKQQQ 430
Query: 438 NQQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQAGNSPASVNQSCSFNRGAVVDYSLL 497
+Q Q+QS LSE + SI+V+PSCLV+PS+S +FQ G+SP S++Q+CS ++ +++DY +L
Sbjct: 431 LEQQQKQSGLSEANHSINVKPSCLVLPSQSPGNFQVGDSPGSISQACSLSKSSIIDYRVL 490
Query: 498 SSQSNNSSLNMGQISDGDIKTTAVITGYLAPGSLSPSASSCSVTADNTSSQQVQNSNIAF 557
S QSNNSS + Q+ D ++K + S +P S+CSV ADN+ Q+ NS+ A
Sbjct: 491 SPQSNNSSAVV-QVLDRELKPACGLNRLSTAASFTPLVSACSVHADNSVGLQLHNSSSAS 549
Query: 558 RAARQVPGLVSNVGDIQGSYGAKSGEVFDLGSLRNHGFMGKGNCIPSRLAVDEFESPMNN 617
A++Q+PG V N S +K ++ D G RN G +GK IPSR AVDE +SPM N
Sbjct: 550 GASKQLPGFVPNHLGFPVSCYSKPSQILDQGPTRNPG-VGKAASIPSRFAVDESDSPMCN 608
Query: 618 LNYGNIYLDNNANKVKEEPNLEFVENAKVGIPMYQQYAPNDLMSVFTD 665
+ +Y ++ KVK+EPN+ +ENAKVG ++Q + DLMS F+D
Sbjct: 609 FSTAKVYTED--TKVKQEPNMNIMENAKVGPALFQNFPSGDLMSAFSD 654
>gi|356502390|ref|XP_003520002.1| PREDICTED: uncharacterized protein LOC100817125 [Glycine max]
Length = 633
Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/652 (58%), Positives = 476/652 (73%), Gaps = 28/652 (4%)
Query: 22 ADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFD 81
A A +FP GLRVLVVDDD T L+I+EQM RC Y VTTC++A VAL++LRERKGCFD
Sbjct: 2 APCAAAAEFPVGLRVLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLLRERKGCFD 61
Query: 82 VVLSDVHMPDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEE 138
VVLSDVHMPDMDG+KLLEH+GLEMDLPVI D SAVM+GIRHGACDYLIKP+REEE
Sbjct: 62 VVLSDVHMPDMDGYKLLEHVGLEMDLPVIMMSGDSTTSAVMKGIRHGACDYLIKPVREEE 121
Query: 139 LKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRIS 198
L+NIWQHVVRK WN+NKE +NSGS+E++D +K G+D+ EY SSV + E KA +KR S
Sbjct: 122 LRNIWQHVVRKFWNDNKELDNSGSMEDSDRNKWGNDDAEYTSSVADAAE-VVKAPKKRSS 180
Query: 199 AKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 258
KEED ELESDDP+T+KKPRVVWSVELHQQFVSAVNQLG+DKAVPKRILELMNVPGLTR
Sbjct: 181 LKEEDI-ELESDDPATSKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTR 239
Query: 259 ENVASHLQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRFDIQALAAS 317
ENVASH LQKFRLYLKRL+GV+ QQ G+ N+ IE+ KLG+ GRFDIQALAA+
Sbjct: 240 ENVASH-----LQKFRLYLKRLSGVAQQQNGMLNAIPGTIES--KLGATGRFDIQALAAA 292
Query: 318 GQIPPQTLAALHAELLGRPTGNLVTAVDQPALLQATLQGPKCIPADHGVAFGQQLVKCQS 377
G +PP+TLAALHAELLG P ++++ VDQ LLQA++QG K A+H VA+GQ LVKC S
Sbjct: 293 GHVPPETLAALHAELLGHPATHMMSTVDQTTLLQASIQGLKHSHAEHAVAYGQPLVKCHS 352
Query: 378 NVPENLPQSIISVDDASTGFGVWAS--NSLGAVASTSNLGGLNPQNGNMLMDILH--QQQ 433
N+ +N SI++V+D S+G+G W S N++G V S++ + QN NMLMDIL Q Q
Sbjct: 353 NIGKNFSPSILTVNDTSSGYGTWPSSNNTIGLVRPNSSVERVGIQNNNMLMDILEHQQSQ 412
Query: 434 QKQQNQQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQAGNSPASVNQSCSFNRGAVVD 493
Q QQ QQ QQQS + + S SI+VQPSC+VVPS+SS +FQA NSPASVNQ SF R A++D
Sbjct: 413 QHQQKQQLQQQSLIHDQSCSINVQPSCMVVPSQSSDTFQAVNSPASVNQDFSFARNAIID 472
Query: 494 YSLLSSQSNNSSLNMGQISDGDIKTTAVITGYLAPGSLSPSASSCSVTADNTSSQQVQNS 553
YSLLS +S N S + Q GD K V+ GY S+CS ++ N + QQ+QNS
Sbjct: 473 YSLLSQKSKN-SFSASQFPGGDTKARGVLYGYST-------PSTCSTSSSNGNRQQLQNS 524
Query: 554 NIAFRAARQVPGLVSNVGDIQGSYGAKSGEVFDLGSLRNHGFMGKGNCIPSRLAVDEFES 613
+ F AAR +P L+ + D + YG KSG++ D RN GF+GKG CIPSR +E ES
Sbjct: 525 TLTFGAARPLPSLLP-MSDRKDPYGFKSGDLLDQVCFRNLGFVGKGTCIPSRFVENEIES 583
Query: 614 PMNNLNYGNIYLDNNANKVKEEPNLEFVENAKVGIPMYQQYAPNDLMSVFTD 665
+++ + + +D++ N +EPN F+ KV P+ ++Y D VFT+
Sbjct: 584 SVSDFSQMKVNVDSSGNTRNQEPN--FINIPKVSHPIIERYPSRDHSRVFTE 633
>gi|297737623|emb|CBI26824.3| unnamed protein product [Vitis vinifera]
Length = 428
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/433 (76%), Positives = 377/433 (87%), Gaps = 11/433 (2%)
Query: 1 MAALQRIVQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNV 60
MAAL ++ S G GS +A DV V DQFPAGLRVLVVDDD+TCL+ILEQMLRRCLY+V
Sbjct: 1 MAALLKVPPQSSGGTNGSCKA-DVVVSDQFPAGLRVLVVDDDVTCLKILEQMLRRCLYHV 59
Query: 61 TTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSA 117
TTCSQA +AL+ILRE+KGCFD+VLSDVHMPDMDG+KLLEH+GLEMDLPVI DGR SA
Sbjct: 60 TTCSQATIALNILREKKGCFDIVLSDVHMPDMDGYKLLEHVGLEMDLPVIMMSADGRTSA 119
Query: 118 VMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIE 177
VMRGIRHGACDYLIKPIREEELKNIWQHVVRK+WNENKEHE+SGSLE+ D HKRG ++ E
Sbjct: 120 VMRGIRHGACDYLIKPIREEELKNIWQHVVRKKWNENKEHEHSGSLEDNDRHKRGGEDAE 179
Query: 178 YASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL 237
YASSVNEG EG K Q+KR +K+EDDGELE++DPST+KKPRVVWSVELHQQFVSAVNQL
Sbjct: 180 YASSVNEGAEGILKGQKKRRDSKDEDDGELENEDPSTSKKPRVVWSVELHQQFVSAVNQL 239
Query: 238 GIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVS-QQGGITNSFCAP 296
GIDKAVPKRILELMNVPGLTRENVASH LQKFRLYLKRL+GV+ QQGGI NSFC P
Sbjct: 240 GIDKAVPKRILELMNVPGLTRENVASH-----LQKFRLYLKRLSGVAQQQGGIPNSFCGP 294
Query: 297 IETNVKLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPTGNLVT-AVDQPALLQATLQ 355
+E NVKLGSLGRFDIQALAASGQIPPQTLAAL AELLGRPT NLV A+DQPALLQA+LQ
Sbjct: 295 VEPNVKLGSLGRFDIQALAASGQIPPQTLAALQAELLGRPTSNLVLPAMDQPALLQASLQ 354
Query: 356 GPKCIPADHGVAFGQQLVKCQSNVPENLPQSIISVDDASTGFGVWASNSLGAVASTSNLG 415
GPKCIP +HGVAFGQ LVKCQ+N+ ++ P +++S +D +GFG W SNSLG V ++ +LG
Sbjct: 355 GPKCIPVEHGVAFGQPLVKCQTNISKHFPPTVVSTEDVPSGFGAWPSNSLGTVGTSGSLG 414
Query: 416 GLNPQNGNMLMDI 428
GL+ QN N+LMD+
Sbjct: 415 GLSAQNNNILMDM 427
>gi|356519365|ref|XP_003528343.1| PREDICTED: uncharacterized protein LOC100804937 [Glycine max]
Length = 633
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/652 (57%), Positives = 469/652 (71%), Gaps = 40/652 (6%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+FP GLRVLVVDDD T L+I+EQM RC Y VTTC++A VAL++LRERKGCFDVVLSDVH
Sbjct: 7 EFPVGLRVLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLLRERKGCFDVVLSDVH 66
Query: 89 MPDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
MPDMDG+KLLEH+GLEMDLPVI D SAVM+GIRHGACDYLIKP+REEEL+NIWQH
Sbjct: 67 MPDMDGYKLLEHVGLEMDLPVIMMSGDSTTSAVMKGIRHGACDYLIKPVREEELRNIWQH 126
Query: 146 VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDG 205
VVRK WN++KE +NSGS+E++D +KRG+D+ EY S + KA +KR S KEED
Sbjct: 127 VVRKFWNDSKEQDNSGSMEDSDQNKRGNDDAEYTSVAD---AAVVKAPKKRSSLKEEDI- 182
Query: 206 ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHL 265
ELESDDP+ +KKPRVVWSVELHQQFVSAVNQLG+DKAVPKRILELMNVPGLTRENVASH
Sbjct: 183 ELESDDPAASKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENVASH- 241
Query: 266 QEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQT 324
LQKFRLYLKRL GV+ QQ G+ N+ PIE+N LG+ GRFD+QALAA+G +PP+T
Sbjct: 242 ----LQKFRLYLKRLTGVAQQQNGMLNTVPGPIESN--LGTNGRFDVQALAAAGHVPPET 295
Query: 325 LAALHAELLGRPTGNLVTAVDQPALLQATLQGPKCIPADHGVAFGQQLVKCQSNVPENLP 384
LAA+HAELLG PT N+++ VDQ LLQA++QG K A H VA+GQ LVKC SN+ +N
Sbjct: 296 LAAIHAELLGHPTNNIMSTVDQTTLLQASIQGLKHSHAGHAVAYGQPLVKCPSNIGKNFS 355
Query: 385 QSIISVDDASTGFGVWAS--NSLGAVASTSNLGGLNPQNGNMLM---------DILHQQQ 433
SI++V+D S+G+G W S N++G V +++ + QN NML+ QQQ
Sbjct: 356 PSILTVNDTSSGYGAWLSSNNTIGLVRPNNSVERVGIQNNNMLILEHQQRQQPQQKQQQQ 415
Query: 434 QKQQNQQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQAGNSPASVNQSCSFNRGAVVD 493
Q++Q QQ QQQS + + S SI+VQPSCLVVPS+SS +FQA NSPASVNQ CSF A++D
Sbjct: 416 QQKQQQQLQQQSLIHDRSCSINVQPSCLVVPSQSSETFQAINSPASVNQDCSFAWNAIID 475
Query: 494 YSLLSSQSNNSSLNMGQISDGDIKTTAVITGYLAPGSLSPSASSCSVTADNTSSQQVQNS 553
YSLL +SNN S + Q GD K V+ GY SSCS ++ N + QQ+QNS
Sbjct: 476 YSLLPQKSNN-SFSASQFPGGDTKARGVLYGYTT-------PSSCSTSSSNGNIQQLQNS 527
Query: 554 NIAFRAARQVPGLVSNVGDIQGSYGAKSGEVFDLGSLRNHGFMGKGNCIPSRLAVDEFES 613
+ F AAR +P L+ + D + YG KSG++ D RN GF+GK +CIPSR +E ES
Sbjct: 528 TLTFGAARPLPSLLP-MTDRKDPYGFKSGDLLDQVCFRNLGFVGKDSCIPSRFVENEIES 586
Query: 614 PMNNLNYGNIYLDNNANKVKEEPNLEFVENAKVGIPMYQQYAPNDLMSVFTD 665
+++ + +D + N+ KEEPN+ KV P+ ++Y D SVF +
Sbjct: 587 SVSDFTQMKVNVDISGNRQKEEPNI-----PKVSHPIIERYPSRDHSSVFAE 633
>gi|224099559|ref|XP_002311532.1| type-b response regulator [Populus trichocarpa]
gi|222851352|gb|EEE88899.1| type-b response regulator [Populus trichocarpa]
Length = 303
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/309 (80%), Positives = 271/309 (87%), Gaps = 9/309 (2%)
Query: 26 VPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLS 85
V DQFPAGLRVLVVDDDITCLR+LE+MLRRCLY+VTTCSQA AL +LRERKGCFDVVLS
Sbjct: 1 VSDQFPAGLRVLVVDDDITCLRLLEKMLRRCLYHVTTCSQATAALKLLRERKGCFDVVLS 60
Query: 86 DVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNI 142
DVHMPDMDGFKLLE +GLEMDLPVI DGR SAVMRGI HGACDYLIKPIREEELKNI
Sbjct: 61 DVHMPDMDGFKLLELVGLEMDLPVIMMSADGRTSAVMRGISHGACDYLIKPIREEELKNI 120
Query: 143 WQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEE 202
WQHV+RK+WNENKE E+SGS E+ D HKRG+D E ASSV+EG EG K Q+KR AK+E
Sbjct: 121 WQHVIRKKWNENKEQEHSGSFEDNDRHKRGNDA-ENASSVSEGAEGVLKGQKKRSIAKDE 179
Query: 203 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 262
DD ELE+DDPS +KKPRVVWSVELHQQFVSAVN LGIDKAVPKRILELMNVPGLTRENVA
Sbjct: 180 DDAELENDDPSASKKPRVVWSVELHQQFVSAVNHLGIDKAVPKRILELMNVPGLTRENVA 239
Query: 263 SHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPP 322
SH LQKFRLYLKRL+GV+QQGGI+N FC +++NVKL LGRFDIQ LAASGQIPP
Sbjct: 240 SH-----LQKFRLYLKRLSGVAQQGGISNPFCGLLDSNVKLNPLGRFDIQVLAASGQIPP 294
Query: 323 QTLAALHAE 331
QTLAALHAE
Sbjct: 295 QTLAALHAE 303
>gi|223942343|gb|ACN25255.1| unknown [Zea mays]
gi|323388571|gb|ADX60090.1| ARR-B family member [Zea mays]
gi|323388695|gb|ADX60152.1| ARR-B transcription factor [Zea mays]
gi|413956503|gb|AFW89152.1| putative two-component response regulator family protein isoform 1
[Zea mays]
gi|413956504|gb|AFW89153.1| putative two-component response regulator family protein isoform 2
[Zea mays]
Length = 686
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 309/681 (45%), Positives = 402/681 (59%), Gaps = 97/681 (14%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
AA A +FP G++VLVVDDD TCL +L++ML C Y+VTTC QA AL +LRE + F
Sbjct: 2 AAAKARGGEFPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGF 61
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREE 137
DV++SDVHMPDMDGF+LLE +GLEMDLPVI D R VM GI+HGACDYLIKP+R E
Sbjct: 62 DVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMNGIKHGACDYLIKPVRME 121
Query: 138 ELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRI 197
ELKNIWQHV+RK++NENK+HE+SGSL++TD ++ +++ EYASS N+G +G++K+QRK+
Sbjct: 122 ELKNIWQHVIRKKFNENKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSWKSQRKK- 180
Query: 198 SAKEEDDGELESDDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGL 256
KE+D+ +LE+ DPS+T KKPRVVWSVELHQQFV+AVN LGIDKAVPK+ILELMNVPGL
Sbjct: 181 REKEDDETDLENGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGL 240
Query: 257 TRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAA 316
TRENVASHLQ KFRLYLKR+ GI + F AP+ ++ + LG + QALAA
Sbjct: 241 TRENVASHLQ-----KFRLYLKRI--AQHHAGIPHPFVAPV-SSANVAPLGGLEFQALAA 292
Query: 317 SGQIPPQTLAALHAELLGRPTGNL-VTAVDQPALLQATLQGPKCIPADHGVAFGQQLVKC 375
SGQIPPQ LAAL ELLGRPT +L + DQ +L A ++G K + +AFGQ + KC
Sbjct: 293 SGQIPPQALAALQDELLGRPTSSLALPGRDQSSLRVAAIKGNKHH-EEREIAFGQPIYKC 351
Query: 376 QSNVPENLPQSIISVDDASTGFGVWASNSLGAVASTSNLGGL-NPQNGNM---------- 424
Q+N PQ+ +V F W +N +G STS LG + N QN NM
Sbjct: 352 QNNAYGAFPQNSPAVGGLQP-FAAWPNNKVGMTDSTSTLGNVGNSQNSNMLLHELQQQPD 410
Query: 425 --LMDILHQQQQKQQN--QQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQAGNSPASV 480
L+ LH K SQ +T S IS + L++PS+ SF + P+
Sbjct: 411 TLLLGTLHNIDAKPSGVVMPSQSLNTF-PASEGISPNQNPLIIPSQP-PSFVSSIPPSMK 468
Query: 481 NQS--------CSFNRG------AVVDYSLLSSQSNN-----------------SSLNMG 509
++S S G A +L+SS N S+ G
Sbjct: 469 HESLLGLPSTSTSLLGGLDMVNQASTSQALISSHGTNLPGLMNRSSNAIPSPGISNFQSG 528
Query: 510 QI--------------SDGDIKTTAVIT-----GYLAPGSLSPSASSCSVTADNTSSQQV 550
I G +KT + + GY+ GS S + S + N +
Sbjct: 529 NIHYVVNQNAMGVSSKPPGVLKTESTDSLSCSYGYIG-GSTSVDSGLFSSQSKNPQYDLL 587
Query: 551 QNSNI---AFRAARQVPGLVSNVGDIQGSYGAKS--------GEVFDLGSLRNHGFMGKG 599
QN N ++ ++ +++G QG G S G++ D G RNHGF+GKG
Sbjct: 588 QNQNDVNGSWSPSQDFDSFGNSLG--QGHPGTTSSNFQSSALGKLPDQGRGRNHGFVGKG 645
Query: 600 NCIPSRLAVDEFESPMNNLNY 620
CIPSR AVDE ESP NNL++
Sbjct: 646 TCIPSRFAVDEVESPTNNLSH 666
>gi|162460694|ref|NP_001104864.1| response regulator 10 [Zea mays]
gi|15667625|dbj|BAB68269.1| response regulator 10 [Zea mays]
Length = 686
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 308/679 (45%), Positives = 398/679 (58%), Gaps = 93/679 (13%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
AA A +FP G++VLVVDDD TCL +L++ML C Y+VTTC QA AL +LRE + F
Sbjct: 2 AAAEARGGEFPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRRGF 61
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREE 137
DV++SDVHMPDMDGF+LLE +GLEMDLPVI D R VM G++HGACDYLIKP+R E
Sbjct: 62 DVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMNGVKHGACDYLIKPVRME 121
Query: 138 ELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRI 197
ELKNIWQHV+RK++NENK+HE+SGSL++TD ++ +++ EYASS N+G +G++K+QRK+
Sbjct: 122 ELKNIWQHVIRKKFNENKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSWKSQRKK- 180
Query: 198 SAKEEDDGELESDDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGL 256
KE+D+ +LE+ DPS+T KKPRVVWSVELHQQFV+AVN LGIDKAVPK+ILELMNVPGL
Sbjct: 181 REKEDDETDLENGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGL 240
Query: 257 TRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAA 316
TRENVASHLQ KFRLYLKR+ GI + F AP+ ++ + LG + QALAA
Sbjct: 241 TRENVASHLQ-----KFRLYLKRI--AQHHAGIPHPFVAPV-SSANVAPLGGLEFQALAA 292
Query: 317 SGQIPPQTLAALHAELLGRPTGNL-VTAVDQPALLQATLQGPKCIPADHGVAFGQQLVKC 375
SGQIPPQ LAAL ELLGRPT +L + DQ +L A +G K + +AFGQ + KC
Sbjct: 293 SGQIPPQALAALQDELLGRPTSSLALPGRDQSSLRVAATKGNKHH-EEREIAFGQPIYKC 351
Query: 376 QSNVPENLPQSIISVDDASTGFGVWASNSLGAVASTSNLGGL-NPQNGNML--------- 425
Q+N PQS +V F W +N +G STS LG + N QN NML
Sbjct: 352 QNNAYGAFPQSSPAVGGLQP-FAAWPNNKVGMPDSTSTLGNVGNSQNSNMLLHELQQQPD 410
Query: 426 ---MDILHQQQQKQQN--QQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQAGNSPASV 480
+ LH K SQ +T S IS + L++PS+ SF + P+
Sbjct: 411 TLLLGTLHNIDAKPSGVVMSSQSLNTF-PASEGISPNQNPLIIPSQP-PSFVSSIPPSMK 468
Query: 481 NQS--------CSFNRG------AVVDYSLLSSQSNN------------SSLNMGQISDG 514
++S S G A +L+SS N S + G
Sbjct: 469 HESLLGLPSTSTSLLGGLDMVNQASTSQALISSHGTNLPGLMNRSSNAIPSPGISNFQSG 528
Query: 515 DIKTT----AVITGYLAPGSLSPSAS---SCSVTADNTSSQQVQNSNIAFRAARQVPGLV 567
+I A+ PG L ++ SCS S+ V + + ++ GL+
Sbjct: 529 NIHYVVNQNAMGVSSRPPGVLKTESTDSLSCSYGYIGGSTS-VDSGLFSSQSKNPQYGLL 587
Query: 568 SNVGDIQGSY------------------GAKS--------GEVFDLGSLRNHGFMGKGNC 601
N D+ GS+ G S G++ D G RNHGF+GKG C
Sbjct: 588 QNQNDVNGSWSPSQDFDSFGNSLGQGHPGTTSSNFQSSALGKLPDQGRGRNHGFVGKGTC 647
Query: 602 IPSRLAVDEFESPMNNLNY 620
IPSR AVDE ESP NNL++
Sbjct: 648 IPSRFAVDEVESPTNNLSH 666
>gi|162460014|ref|NP_001104861.1| response regulator 8 [Zea mays]
gi|13661174|dbj|BAB41137.1| response regulator 8 [Zea mays]
gi|195656391|gb|ACG47663.1| two-component response regulator ARR1 [Zea mays]
Length = 684
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 314/680 (46%), Positives = 400/680 (58%), Gaps = 106/680 (15%)
Query: 19 SRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKG 78
+R AD FP G++VLVVDDD TCL +L++ML C Y+VTTC QA AL +LRE +
Sbjct: 6 ARGAD------FPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRR 59
Query: 79 CFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIR 135
FDV++SDVHMPDMDGF+LLE +GLEMDLPVI D R VM+GI+HGACDYLIKP+R
Sbjct: 60 GFDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVR 119
Query: 136 EEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRK 195
EELKNIWQHVVRK++N NK+HE+SGSL++TD ++ +++ EYASS N+G +G++K+Q+K
Sbjct: 120 MEELKNIWQHVVRKKFNGNKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSWKSQKK 179
Query: 196 RISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 255
+ KE+D+ +LES DPST+KKPRVVWSVELHQQFV+AVN LGIDKAVPK+ILELMNVPG
Sbjct: 180 K-REKEDDETDLESGDPSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPG 238
Query: 256 LTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALA 315
LTRENVASHLQ KFRLYLKR+ GI + F A ++ K+ LG + QALA
Sbjct: 239 LTRENVASHLQ-----KFRLYLKRI--AQHHAGIPHPFVAS-ASSAKVAPLGGLEFQALA 290
Query: 316 ASGQIPPQTLAALHAELLGRPTGNL-VTAVDQPALLQATLQGPKCIPADHG---VAFGQQ 371
ASGQIPPQ LAAL ELLGRPT +L + DQ +L A ++G K HG +AFGQ
Sbjct: 291 ASGQIPPQALAALQDELLGRPTSSLALPGRDQSSLRLAAIKGNK----PHGEREIAFGQP 346
Query: 372 LVKCQSNVPENLPQSIISVDDASTGFGVWASNSLGAVASTSNLGGL-NPQNGNM------ 424
+ KCQ+N QS +V + F W +N LG S++ LG + N QN NM
Sbjct: 347 IYKCQNNTYGAFSQSSPAVGGLPS-FAAWPNNKLGMTDSSNTLGNVGNSQNSNMLLHELQ 405
Query: 425 ------LMDILHQQQQKQQNQQSQQQS-TLSETSRSISVQPSCLVVPSRSSASFQAGNSP 477
L LH K QS + S IS + LV+PS+S SF A P
Sbjct: 406 QQPDTLLSGTLHNIDVKPSGVVMPSQSLNVFPASEGISHNQNPLVIPSQS-PSFLASVPP 464
Query: 478 A--------SVNQSCSFNRG------AVVDYSLLSSQSNN-----------------SSL 506
+ S + S S G A L+SS N S+
Sbjct: 465 SMKHESLLGSPSPSTSLLGGLDMVNQASTSQPLISSHGANLPGLMNRSSNAMPSPGISNF 524
Query: 507 NMGQIS--------------DGDIKT--TAVIT---GYLAPGSLSPSASSCSVTADNTSS 547
G I G +KT T +T GY+ GS S +S S A N
Sbjct: 525 QSGNIPYVVNQNAMGVSSRPPGVLKTECTESLTHSYGYIG-GSTSVDSSLLSSQAKNPQY 583
Query: 548 QQVQNSN---IAFRAARQVPGLVSNVGDIQGSYGAKS--------GEVFDLGSLRNHGFM 596
+Q+ N ++ +++ +++G QG G+ S G++ D G RNHGF+
Sbjct: 584 GLLQSQNDVSSSWLSSQDFDSFGNSLG--QGHPGSTSSNFQSSALGKLPDQGRGRNHGFV 641
Query: 597 GKGNCIPSRLAVDEFESPMN 616
GKG CIPSR AVDE ESP N
Sbjct: 642 GKGTCIPSRFAVDEVESPTN 661
>gi|115451653|ref|NP_001049427.1| Os03g0224200 [Oryza sativa Japonica Group]
gi|24308616|gb|AAN52739.1| Putative response regulator 10 [Oryza sativa Japonica Group]
gi|108706930|gb|ABF94725.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|108706931|gb|ABF94726.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|108706932|gb|ABF94727.1| myb-like DNA-binding domain, SHAQKYF class family protein,
expressed [Oryza sativa Japonica Group]
gi|110331747|dbj|BAE97711.1| B-type response regulator [Oryza sativa Japonica Group]
gi|113547898|dbj|BAF11341.1| Os03g0224200 [Oryza sativa Japonica Group]
gi|118790738|tpd|FAA00254.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|125585452|gb|EAZ26116.1| hypothetical protein OsJ_09978 [Oryza sativa Japonica Group]
gi|215767224|dbj|BAG99452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767240|dbj|BAG99468.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 691
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 264/454 (58%), Positives = 325/454 (71%), Gaps = 33/454 (7%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+FP G++VLVVDDD TCL +L++ML C Y+ TTCSQA AL +LRE + FDV++SDVH
Sbjct: 11 EFPVGMKVLVVDDDPTCLAVLKRMLLECRYDATTCSQATRALTMLRENRRGFDVIISDVH 70
Query: 89 MPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
MPDMDGF+LLE +GLEMDLPVI D R VM+GI+HGACDYLIKP+R EELKNIWQH
Sbjct: 71 MPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQH 130
Query: 146 VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDG 205
V+RK++NENKEHE+SGSL++TD + +++ EYASS N+G EG++K+Q+K+ ++ DG
Sbjct: 131 VIRKKFNENKEHEHSGSLDDTDRTRPTNNDNEYASSANDGAEGSWKSQKKKRDKDDD-DG 189
Query: 206 ELESDDP-STTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
ELES DP ST+KKPRVVWSVELHQQFV+AVN LGIDKAVPK+ILELMNVPGLTRENVASH
Sbjct: 190 ELESGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASH 249
Query: 265 LQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQT 324
LQKFRLYLKR+ GI N FC P + K+GSLG D QALAASGQIPPQ
Sbjct: 250 -----LQKFRLYLKRI--AQHHAGIANPFCPPASSG-KVGSLGGLDFQALAASGQIPPQA 301
Query: 325 LAALHAELLGRPTGNLV-TAVDQPALLQATLQGPKCIPADHG---VAFGQQLVKCQSNVP 380
LAAL ELLGRPT +LV DQ +L A ++G K HG +AFGQ + KCQ+N
Sbjct: 302 LAALQDELLGRPTNSLVLPGRDQSSLRLAAVKGNK----PHGEREIAFGQPIYKCQNNAY 357
Query: 381 ENLPQSIISVDDASTGFGVWASNSLGAVASTSNLGGL-NPQNGNMLMDILHQQQQKQQNQ 439
PQS +V + F W +N LG ST LGG+ N QN N+ +LH+ QQ
Sbjct: 358 GAFPQSSPAVGGMPS-FSAWPNNKLGMADSTGTLGGMSNSQNSNI---VLHELQQ----- 408
Query: 440 QSQQQSTLSETSRSISVQPSCLVVPSRSSASFQA 473
Q + LS T S+ V+PS +V+PS+S +F A
Sbjct: 409 --QPDAMLSGTLHSLDVKPSGIVMPSQSLNTFSA 440
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 582 GEVFDLGSLRNHGFMGKGNCIPSRLAVDEFESPMNNLNY 620
G++ D G +NHGF+GKG CIPSR AVDE ESP NNL++
Sbjct: 633 GKLPDQGRGKNHGFVGKGTCIPSRFAVDEIESPTNNLSH 671
>gi|125542952|gb|EAY89091.1| hypothetical protein OsI_10579 [Oryza sativa Indica Group]
Length = 691
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 264/454 (58%), Positives = 325/454 (71%), Gaps = 33/454 (7%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+FP G++VLVVDDD TCL +L++ML C Y+ TTCSQA AL +LRE + FDV++SDVH
Sbjct: 11 EFPVGMKVLVVDDDPTCLAVLKRMLLECRYDATTCSQATRALTMLRENRRGFDVIISDVH 70
Query: 89 MPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
MPDMDGF+LLE +GLEMDLPVI D R VM+GI+HGACDYLIKP+R EELKNIWQH
Sbjct: 71 MPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQH 130
Query: 146 VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDG 205
V+RK++NENKEHE+SGSL++TD + +++ EYASS N+G EG++K+Q+K+ ++ DG
Sbjct: 131 VIRKKFNENKEHEHSGSLDDTDRTRPTNNDNEYASSANDGAEGSWKSQKKKRDKDDD-DG 189
Query: 206 ELESDDP-STTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
ELES DP ST+KKPRVVWSVELHQQFV+AVN LGIDKAVPK+ILELMNVPGLTRENVASH
Sbjct: 190 ELESGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASH 249
Query: 265 LQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQT 324
LQKFRLYLKR+ GI N FC P + K+GSLG D QALAASGQIPPQ
Sbjct: 250 -----LQKFRLYLKRI--AQHHAGIANPFCPPASSG-KVGSLGGLDFQALAASGQIPPQA 301
Query: 325 LAALHAELLGRPTGNLV-TAVDQPALLQATLQGPKCIPADHG---VAFGQQLVKCQSNVP 380
LAAL ELLGRPT +LV DQ +L A ++G K HG +AFGQ + KCQ+N
Sbjct: 302 LAALQDELLGRPTNSLVLPGRDQSSLRLAAVKGNK----PHGEREIAFGQPIYKCQNNAY 357
Query: 381 ENLPQSIISVDDASTGFGVWASNSLGAVASTSNLGGL-NPQNGNMLMDILHQQQQKQQNQ 439
PQS +V + F W +N LG ST LGG+ N QN N+ +LH+ QQ
Sbjct: 358 GAFPQSSPAVGGMPS-FSAWPNNKLGMADSTGTLGGMSNSQNSNI---VLHELQQ----- 408
Query: 440 QSQQQSTLSETSRSISVQPSCLVVPSRSSASFQA 473
Q + LS T S+ V+PS +V+PS+S +F A
Sbjct: 409 --QPDAMLSGTLHSLDVKPSGIVMPSQSLNTFSA 440
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 582 GEVFDLGSLRNHGFMGKGNCIPSRLAVDEFESPMNNLNY 620
G++ D G +NHGF+GKG CIPSR AVDE ESP NNL++
Sbjct: 633 GKLPDQGRGKNHGFVGKGTCIPSRFAVDEIESPTNNLSH 671
>gi|357113330|ref|XP_003558456.1| PREDICTED: uncharacterized protein LOC100821963 [Brachypodium
distachyon]
Length = 677
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 255/451 (56%), Positives = 325/451 (72%), Gaps = 27/451 (5%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+FP G++VLVVDDD TCL +L+QML +C Y+ TTCSQ+ AL +LRE + FDV++SDVH
Sbjct: 11 EFPVGMKVLVVDDDPTCLAVLKQMLVQCRYDATTCSQSTRALSMLRENRRGFDVIISDVH 70
Query: 89 MPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
MPDMDGF+LLE +GLEMDLPVI D R VM+GI+HGACDYLIKP+R EELKNIWQH
Sbjct: 71 MPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQH 130
Query: 146 VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDG 205
VVRK+++ NKEHE+SGSL++TD ++ +++ EYASS+N+G + ++K+Q+K+ KEEDD
Sbjct: 131 VVRKKFSGNKEHEHSGSLDDTDRNRPANNDNEYASSINDGADDSWKSQKKK-RDKEEDDS 189
Query: 206 ELESDDPS-TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
ELES DPS ++KKPRVVWSVELHQQFV+AVN LGIDKAVPK+ILELMNVPGLTRENVASH
Sbjct: 190 ELESGDPSNSSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASH 249
Query: 265 LQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQT 324
LQKFRLYLKR+ GITN +C P ++ ++ SLG D QALAASGQIPPQ
Sbjct: 250 -----LQKFRLYLKRI--AQHHAGITNPYCTP-ASSAQVASLGGLDFQALAASGQIPPQA 301
Query: 325 LAALHAELLGRPTGNLV-TAVDQPALLQATLQGPKCIPADHGVAFGQQLVKCQSNVPENL 383
LAAL ELLGR T ++V DQ +L A ++G K + +AFGQ + KCQ+N
Sbjct: 302 LAALQDELLGRTTTSMVLPGRDQSSLRLAAVKGNKPQ-GEREIAFGQPIFKCQNNSYGAF 360
Query: 384 PQSIISVDDASTGFGVWASNSLGAVASTSNLGGL-NPQNGNMLMDILHQQQQKQQNQQSQ 442
PQS +V + F W +N LG STS LG + N QN N+ +LH+ QQ Q
Sbjct: 361 PQSSPTVGRLPS-FSAWPNNKLGMADSTSTLGNVNNSQNSNI---VLHELQQ-------Q 409
Query: 443 QQSTLSETSRSISVQPSCLVVPSRSSASFQA 473
+ LS T ++ V+PS + +PS+S +F A
Sbjct: 410 PDTMLSGTLHALDVKPSGIAMPSQSLNTFPA 440
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 53/182 (29%)
Query: 462 VVPSRSSASFQAGNSPASVNQSCSFNRGAVVDYSLLSSQSNNSSLNMGQISDGDIKTTAV 521
V+PS+ ++FQ GN P VN NSS+ +G G +KT +
Sbjct: 508 VMPSQGISNFQTGNIPYLVN---------------------NSSIGVGSKPPGVLKTEST 546
Query: 522 IT-----GYLAPGSLSPSASSCSVTADNTSSQQVQNSNIAF-RAARQVPGLVS--NVGDI 573
+ GY+ GS SP S S Q +N+ F ++ V G S NV +
Sbjct: 547 DSLNQSFGYIC-GS-SPMDSGLL-------SSQPRNAQFGFLQSPNDVTGGWSLQNVDNY 597
Query: 574 QGSYGAKS---------------GEVFDLGSLRNHGFMGKGNCIPSRLAVDEFESPMNNL 618
+ + G G++ D G +N GF+GKG CIP+R AVDE ESP N+L
Sbjct: 598 RNTIGPSHPVSSSSSFQSSNVALGKLPDQGRGKNLGFVGKGTCIPNRFAVDEVESPTNSL 657
Query: 619 NY 620
++
Sbjct: 658 SH 659
>gi|326488979|dbj|BAJ98101.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 684
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 259/452 (57%), Positives = 322/452 (71%), Gaps = 28/452 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G++VLVVDDD TCL +L++ML +C Y+ TTCSQA AL +LRE +G FDV++SDV
Sbjct: 11 DQFPVGMKVLVVDDDQTCLAVLKRMLIQCRYDATTCSQATRALAMLRENRGAFDVIISDV 70
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGF+LLE +GLEMDLPVI D R VM+GI+HGACDYLIKP+R EELKNIWQ
Sbjct: 71 HMPDMDGFRLLELVGLEMDLPVIMMSADSRTDLVMKGIKHGACDYLIKPVRMEELKNIWQ 130
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HVVRK++ NKEHE+SGSL++TD ++ +++ EYASS N+G E ++K+Q+K+ KEEDD
Sbjct: 131 HVVRKKFGGNKEHEHSGSLDDTDRNRPTNNDNEYASSANDGAEDSWKSQKKK-RDKEEDD 189
Query: 205 GELESDDPS-TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 263
ELES DPS +KKPRVVWSVELHQQFV+AVN LGIDKAVPK+ILELMNVPGLTRENVAS
Sbjct: 190 SELESGDPSNNSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVAS 249
Query: 264 HLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQ 323
H LQKFRLYLKR+ G+ N + P ++ ++ SLG D QALAASGQIPPQ
Sbjct: 250 H-----LQKFRLYLKRI--AQHHAGMGNPYGVP-ASSAQVASLGGLDFQALAASGQIPPQ 301
Query: 324 TLAALHAELLGRPTGNLV-TAVDQPALLQATLQGPKCIPADHGVAFGQQLVKCQSNVPEN 382
LAAL ELLGRPT NLV DQ +L A ++G K P +AFGQ + K Q+N
Sbjct: 302 ALAALQDELLGRPTNNLVLPGRDQSSLRLAAVKGNK--PHGEQIAFGQPIYKVQNNSYAA 359
Query: 383 LPQSIISVDDASTGFGVWASNSLGAVASTSNLGGL-NPQNGNMLMDILHQQQQKQQNQQS 441
LPQ+ +V + F W +N LG S S LG + N QN N+ LH+ QQ
Sbjct: 360 LPQNSPAVGRMPS-FSAWPNNKLGMADSMSALGNVNNSQNSNI---GLHELQQ------- 408
Query: 442 QQQSTLSETSRSISVQPSCLVVPSRSSASFQA 473
Q + LS T ++ V+PS +V+PS+S +F A
Sbjct: 409 QPDTMLSGTLHTLDVKPSGIVMPSQSLNTFPA 440
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 49/204 (24%)
Query: 438 NQQSQQQSTLSETSRSIS--VQPSCLVVPSRSSASFQAGNSPASVNQSCSFNRGAVVDYS 495
NQ S Q +S ++S + + V+PS+ ++FQ GN+P VNQ+
Sbjct: 491 NQASTSQPFISSHGGNLSGLMNRNSNVIPSQGISNFQTGNTPYLVNQN------------ 538
Query: 496 LLSSQSNNSSLNMGQISDGDIKTTAVITGYLAPGSLSPSASSCSVTADNTSSQQVQNSNI 555
S+ MG G +KT + SL+ S + S Q +N+
Sbjct: 539 ---------SMGMGSKPPGVLKTEST-------DSLNQSYGYVNHMDSGLLSSQSKNAQF 582
Query: 556 AF-RAARQVPGLVS---NVGDIQGSYG---------------AKSGEVFDLGSLRNHGFM 596
F ++ V G S N+ + + G A G++ D G +N GF+
Sbjct: 583 GFLQSQNDVTGGWSSLQNMDCFRNTVGPSQPVSSSSSFHSSNAALGKLPDQGRGKNLGFV 642
Query: 597 GKGNCIPSRLAVDEFESPMNNLNY 620
GKG CIP+R AVDE ESP N+L++
Sbjct: 643 GKGTCIPNRFAVDEIESPTNSLSH 666
>gi|242041701|ref|XP_002468245.1| hypothetical protein SORBIDRAFT_01g042400 [Sorghum bicolor]
gi|241922099|gb|EER95243.1| hypothetical protein SORBIDRAFT_01g042400 [Sorghum bicolor]
Length = 686
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 261/462 (56%), Positives = 328/462 (70%), Gaps = 33/462 (7%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
AA A +FP G++VLVVDDD TCL +L++ML C Y+VTTC QA AL +LRE + F
Sbjct: 2 AAAEARGGEFPVGMKVLVVDDDPTCLLVLKRMLLDCRYDVTTCPQATRALTMLRENRRGF 61
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREE 137
DV++SDVHMPDMDGF+LLE +GLEMDLPVI D R VM+GI+HGACDYLIKP+R E
Sbjct: 62 DVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRME 121
Query: 138 ELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRI 197
ELKNIWQHVVRK++NENK+HE+SGSL++TD ++ +++ EYASS N+G +G++K+Q+K+
Sbjct: 122 ELKNIWQHVVRKKFNENKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSWKSQKKK- 180
Query: 198 SAKEEDDGELESDDP-STTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGL 256
KE+D+ +LE+ DP ST+KKPRVVWSVELHQQFV+AVN LGIDKAVPK+ILELMNVPGL
Sbjct: 181 REKEDDETDLENGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGL 240
Query: 257 TRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAA 316
TRENVASH LQKFRLYLKR+ GI + F AP ++ K+ LG + QALAA
Sbjct: 241 TRENVASH-----LQKFRLYLKRI--AQHHAGIPHPFVAP-ASSAKVAPLGGLEFQALAA 292
Query: 317 SGQIPPQTLAALHAELLGRPTGNL-VTAVDQPALLQATLQGPKCIPADHG---VAFGQQL 372
SGQIPPQ LAAL ELLGRPT +L + DQ +L A ++G K HG +AFGQ +
Sbjct: 293 SGQIPPQALAALQDELLGRPTSSLALPGRDQSSLRLAAIKGNKS----HGEREIAFGQPI 348
Query: 373 VKCQSNVPENLPQSIISVDDASTGFGVWASNSLGAVASTSNLGGL-NPQNGNMLMDILHQ 431
KCQ+N PQS SV + F W +N LG S S LG + + QN NML LH+
Sbjct: 349 YKCQNNAYGAFPQSSPSVGGLPS-FAAWPNNKLGMTDSPSTLGNVGSSQNNNML---LHE 404
Query: 432 QQQKQQNQQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQA 473
QQ Q + LS T +I V+PS +V+PS+S +F A
Sbjct: 405 LQQ-------QPDTLLSGTLHNIDVKPSGVVMPSQSLNAFPA 439
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 88/215 (40%), Gaps = 70/215 (32%)
Query: 438 NQQSQQQSTLSETSRSIS--VQPSCLVVPSRSSASFQAGNSPASVNQ------------- 482
NQ S Q +S ++ + S +PS +FQ+GN P VNQ
Sbjct: 490 NQASTSQPLISSHGANLPGLINRSTNAMPSPGINNFQSGNIPYLVNQNAMGVSSRPPGVL 549
Query: 483 ------SCSFNRGAV-----VDYSLLSSQSNNSSLNMGQISDGDIKTTAVITGYLAPGSL 531
S S + G + VD LLSSQS N+ + Q S D+ GS
Sbjct: 550 KTESTDSLSRSYGYIGGSTSVDSVLLSSQSKNAQYGLLQ-SQNDVS-----------GSW 597
Query: 532 SPS------ASSCSVTADNTSSQQVQNSNIAFRAARQVPGLVSNVGDIQGSYGAKSGEVF 585
SPS +S ++S Q+S + G++
Sbjct: 598 SPSQDFDSFGNSLGQGHPGSTSSNFQSSAL--------------------------GKLP 631
Query: 586 DLGSLRNHGFMGKGNCIPSRLAVDEFESPMNNLNY 620
D G RNHGF+GKG CIPSR AVDE ESP NNL++
Sbjct: 632 DQGRGRNHGFVGKGTCIPSRFAVDEVESPTNNLSH 666
>gi|414865594|tpg|DAA44151.1| TPA: putative two-component response regulator family protein
isoform 1 [Zea mays]
gi|414865595|tpg|DAA44152.1| TPA: putative two-component response regulator family protein
isoform 2 [Zea mays]
gi|414865596|tpg|DAA44153.1| TPA: putative two-component response regulator family protein
isoform 3 [Zea mays]
Length = 684
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 258/463 (55%), Positives = 325/463 (70%), Gaps = 38/463 (8%)
Query: 19 SRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKG 78
+R AD FP G++VLVVDDD TCL +L++ML C Y+VTTC QA AL +LRE +
Sbjct: 6 ARGAD------FPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLRENRR 59
Query: 79 CFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIR 135
FDV++SDVHMPDMDGF+LLE +GLEMDLPVI D R VM+GI+HGACDYLIKP+R
Sbjct: 60 GFDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVR 119
Query: 136 EEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRK 195
EELKNIWQHVVRK++N NK+HE+SGSL++TD ++ +++ EYASS N+G +G++K+Q+K
Sbjct: 120 MEELKNIWQHVVRKKFNGNKDHEHSGSLDDTDRNRPTNNDNEYASSANDGGDGSWKSQKK 179
Query: 196 RISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 255
+ KE+D+ +LES DPST+KKPRVVWSVELHQQFV+AVN LGIDKAVPK+ILELMNVPG
Sbjct: 180 K-REKEDDETDLESGDPSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPG 238
Query: 256 LTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALA 315
LTRENVASH LQKFRLYLKR+ GI + F A ++ K+ LG + QALA
Sbjct: 239 LTRENVASH-----LQKFRLYLKRI--AQHHAGIPHPFVAS-ASSAKVAPLGGLEFQALA 290
Query: 316 ASGQIPPQTLAALHAELLGRPTGNL-VTAVDQPALLQATLQGPKCIPADHG---VAFGQQ 371
ASGQIPPQ LAAL ELLGRPT +L + DQ +L A ++G K HG +AFGQ
Sbjct: 291 ASGQIPPQALAALQDELLGRPTSSLALPGRDQSSLRLAAIKGNK----PHGEREIAFGQP 346
Query: 372 LVKCQSNVPENLPQSIISVDDASTGFGVWASNSLGAVASTSNLGGL-NPQNGNMLMDILH 430
+ KCQ+N QS +V + F W +N LG S++ LG + N QN NML LH
Sbjct: 347 IYKCQNNTYGAFSQSSPAVGGLPS-FAAWPNNKLGMTDSSNTLGNVGNSQNSNML---LH 402
Query: 431 QQQQKQQNQQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQA 473
+ QQ Q + LS T +I V+PS +V+PS+S F A
Sbjct: 403 ELQQ-------QPDTLLSGTLHNIDVKPSGVVMPSQSLNVFPA 438
>gi|359950754|gb|AEV91167.1| MYB-related protein [Triticum aestivum]
Length = 630
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 263/564 (46%), Positives = 342/564 (60%), Gaps = 65/564 (11%)
Query: 72 ILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACD 128
+LRE +G FDV++SDVHMPDM+GF+LLE +GLEMDLPVI D R VM+GI+HGACD
Sbjct: 1 MLRENRGAFDVIISDVHMPDMNGFRLLELVGLEMDLPVIMMSADSRTDLVMKGIKHGACD 60
Query: 129 YLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEG 188
YLIKP+R EELKNIWQHVVRK++ NKEHE+SGSL++TD ++ +++ EYASS N+G E
Sbjct: 61 YLIKPVRMEELKNIWQHVVRKKFGGNKEHEHSGSLDDTDRNRLTNNDNEYASSANDGAED 120
Query: 189 TFKAQRKRISAKEEDDGELESDDPST-TKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRI 247
++K+Q+K+ KEEDD ELES DPS +KK RVVWSVELHQQFV+AVN LGIDKAVPK+I
Sbjct: 121 SWKSQKKK-RDKEEDDSELESGDPSNNSKKLRVVWSVELHQQFVNAVNHLGIDKAVPKKI 179
Query: 248 LELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLG 307
LELMNVPGLTRENVASHLQ KFRLYLKR+ G+ N + P ++ ++ SLG
Sbjct: 180 LELMNVPGLTRENVASHLQ-----KFRLYLKRI--AQHHAGMANPYGVP-ASSAQVASLG 231
Query: 308 RFDIQALAASGQIPPQTLAALHAELLGRPTGNLV-TAVDQPALLQATLQGPKCIPADHGV 366
D QALAASGQIPPQ LAAL ELLGRPT +LV DQ +L A ++G K P +
Sbjct: 232 GLDFQALAASGQIPPQALAALQDELLGRPTNSLVLPGRDQSSLRLAAVKGNK--PHGEQI 289
Query: 367 AFGQQLVKCQSNVPENLPQSIISVDDASTGFGVWASNSLGAVASTSNLGGLN-PQNGNML 425
AFGQ + K Q+N LPQ+ + + F W +N LG S S LG +N QN NM
Sbjct: 290 AFGQPIYKVQNNSYAALPQNNPAAGRMPS-FSAWPNNKLGMSDSMSALGNVNNSQNSNM- 347
Query: 426 MDILHQQQQKQQNQQSQQQSTLSETSRSISVQPSCLVVPSRSSASFQAGNSPASVNQSCS 485
+LH+ QQ Q + LS T ++ V+PS +V+PS+S +F PAS + S
Sbjct: 348 --VLHELQQ-------QPDTMLSGTLHTLDVKPSGIVMPSQSLNTF-----PAS--EGLS 391
Query: 486 FNRGAVVDYSLLSSQSNNSSLNMGQISDGDIKTTAVITGYLAPGSLSP------SASSCS 539
N+ +++ + SQS + +TG P S+ P S SS S
Sbjct: 392 ANQNSLI----IPSQS-----------------SGFLTGI--PPSMKPELVLPTSQSSNS 428
Query: 540 VTADNTSSQQVQNSNIAFRA-ARQVPGLVSNVGDIQGSYGAKSGEVFDLGSLRNHGFMGK 598
+ Q S + +PGL++ ++ S G S + + L N MG
Sbjct: 429 LLGGIDLINQASTSQPFISSHGGNLPGLMNRNSNVMPSQGISSFQTGNTPYLVNQNSMGM 488
Query: 599 GNCIPSRLAVDEFESPMNNLNYGN 622
G+ P L + +S N Y N
Sbjct: 489 GSKPPGVLKTESTDSLNQNYAYAN 512
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 47/178 (26%)
Query: 462 VVPSRSSASFQAGNSPASVNQSCSFNRGAVVDYSLLSSQSNNSSLNMGQISDGDIKTTAV 521
V+PS+ +SFQ GN+P VNQ+ S+ MG G +KT +
Sbjct: 463 VMPSQGISSFQTGNTPYLVNQN---------------------SMGMGSKPPGVLKTEST 501
Query: 522 ITGYLAPGSLSPSASSCSVTADNTSSQQVQNSNIAF-RAARQVPGLVSNVGDIQG----- 575
SL+ + + + S Q +N+ F ++ V G S++ ++ G
Sbjct: 502 -------DSLNQNYAYANHMDSGLLSSQSKNAQFGFLQSPNDVTGGWSSLQNMDGYRNTV 554
Query: 576 -------------SYGAKSGEVFDLGSLRNHGFMGKGNCIPSRLAVDEFESPMNNLNY 620
S A G++ D G +N GF+GKG CIP+R AVDE ESP N+L++
Sbjct: 555 GPSQPVSSSSSFQSSNAALGKLPDQGRGKNLGFVGKGACIPNRFAVDEIESPTNSLSH 612
>gi|313184318|emb|CBL94183.1| putative type-b response regulator (sensor histidine kinase) [Malus
x domestica]
Length = 674
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 237/435 (54%), Positives = 292/435 (67%), Gaps = 32/435 (7%)
Query: 11 SGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVAL 70
S S G+ ++ DV V DQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C++A +AL
Sbjct: 11 STASSSGAWKSGDV-VTDQFPAGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEIAL 69
Query: 71 DILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGAC 127
+LRE K FD+V+SDVHMPDMDGFKLLE +GLEMDLPVI D S VM+G+ HGAC
Sbjct: 70 SLLRENKNGFDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDGQSVVMKGVTHGAC 129
Query: 128 DYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTE 187
DYLIKP+R E LKNIWQHVVRK+ NE K+ E SGS+EE D ++ S++ +Y+SS N E
Sbjct: 130 DYLIKPVRIEALKNIWQHVVRKKKNEWKDVEQSGSVEEGDRQQKPSEDADYSSSAN---E 186
Query: 188 GTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRI 247
GT+K ++R K+E++ E DD ST KKPRVVWSVELHQQFV AVNQLGIDKAVPK+I
Sbjct: 187 GTWKNSKRR---KDEEEETDERDDSSTLKKPRVVWSVELHQQFVGAVNQLGIDKAVPKKI 243
Query: 248 LELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETNV-KLGS 305
LELMNVPGLTRENVASH LQK+RLYL+RL+GVSQ Q + NSF +P E + + S
Sbjct: 244 LELMNVPGLTRENVASH-----LQKYRLYLRRLSGVSQHQNNLGNSFMSPQEASFGAMSS 298
Query: 306 LGRFDIQALAASGQIPPQTLAALHAELLGRPT---GNLVTAVDQPALLQATLQGPKCIPA 362
L D+Q LA +GQ+P Q+LA L A LGR T G + VDQ L + + PK
Sbjct: 299 LSGLDLQTLAVTGQLPAQSLATLQAAGLGRSTIKSGVPMPLVDQRNLF--SFENPK---- 352
Query: 363 DHGVAFGQQLVKCQSNVPENLPQSIISVDDASTGFGVWAS-NSLGAVASTSNLGGLNPQN 421
+ F + S+ P NL I + +A + S SLGAV N G+ QN
Sbjct: 353 ---LRFAEGQHHLSSSKPMNLLHGIPTTMEAKQLANLHQSAQSLGAVNMQVNAHGV--QN 407
Query: 422 GNMLMDILHQQQQKQ 436
++LM + Q + Q
Sbjct: 408 SSLLMPVAQSQPRGQ 422
>gi|359477139|ref|XP_002275142.2| PREDICTED: two-component response regulator ARR1-like [Vitis
vinifera]
Length = 681
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/357 (61%), Positives = 261/357 (73%), Gaps = 24/357 (6%)
Query: 11 SGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVAL 70
S S G+ +A DV VPDQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C++A AL
Sbjct: 11 STASSSGAWKAGDV-VPDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETAL 69
Query: 71 DILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIT----DGRVSAVMRGIRHGA 126
+LR K FD+V+SDVHMPDMDGFKLLEHIGLEMDLPVI DG+ VM+G+ HGA
Sbjct: 70 SLLRGNKSGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGK-HVVMKGVTHGA 128
Query: 127 CDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGT 186
CDYLIKP+R E LKNIWQHVVRKR NE K+ E SGS+E+ D ++ S++++Y+SS N
Sbjct: 129 CDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEDGDRQQKPSEDVDYSSSAN--- 185
Query: 187 EGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKR 246
EG +K ++R K+E+D E DD ST KKPRVVWSVELHQQFV+AVNQLGIDKAVPK+
Sbjct: 186 EGNWKNSKRR---KDEEDDAEERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKK 242
Query: 247 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETNV-KLG 304
ILELMNVPGLTRENVASH LQK+RLYL+RL+GVSQ Q G+ NSF P E +
Sbjct: 243 ILELMNVPGLTRENVASH-----LQKYRLYLRRLSGVSQHQNGLNNSFMGPQEATFGSIS 297
Query: 305 SLGRFDIQALAASGQIPPQTLAALHAELLGRPTGNL---VTAVDQPALLQATLQGPK 358
SL D+Q LA +GQ+P Q+LA L A LGR TG + VDQ L + + PK
Sbjct: 298 SLNGLDLQTLAVAGQLPAQSLATLQAAGLGRSTGKSGLPMPLVDQRNLF--SFEAPK 352
>gi|356521815|ref|XP_003529546.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 679
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/356 (60%), Positives = 255/356 (71%), Gaps = 26/356 (7%)
Query: 11 SGGSGYGSSRAADV------AVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCS 64
S G G S+ A V AV DQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C+
Sbjct: 4 SNGKGSMSTLTASVVMKSGDAVSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCN 63
Query: 65 QAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIT----DGRVSAVMR 120
+A AL +LRE K FD+V+SDVHMPDMDGFKLLEHIGLEMDLPVI DG+ S VM+
Sbjct: 64 RAETALSLLRENKNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGK-SVVMK 122
Query: 121 GIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYAS 180
G+ HGACDYLIKP+R E LKNIWQHVVRKR NE K+ E SGS EE D + SDE +Y+S
Sbjct: 123 GVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDAEQSGSAEEGDRQPKASDEADYSS 182
Query: 181 SVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGID 240
S N EG+++ +KR +EE + ++ ST KKPRVVWSVELHQQFV+AV+QLGID
Sbjct: 183 SAN---EGSWRNSKKRRDEEEEAEDRDDT---STLKKPRVVWSVELHQQFVAAVDQLGID 236
Query: 241 KAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIET 299
KAVPK+ILELMNVPGLTRENVASH LQK+RLYL+RL+GVSQ Q + NSF +P E
Sbjct: 237 KAVPKKILELMNVPGLTRENVASH-----LQKYRLYLRRLSGVSQHQNNMNNSFLSPQEA 291
Query: 300 NV-KLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPTGNLVTAVDQPALLQATL 354
+ S+ D+Q LA +GQ+P Q+LA L A LGRPTG V P + Q L
Sbjct: 292 TFGTISSINGIDLQTLAVAGQLPAQSLATLQAAGLGRPTGK--AGVPMPLMDQRNL 345
>gi|296083291|emb|CBI22927.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/357 (61%), Positives = 261/357 (73%), Gaps = 24/357 (6%)
Query: 11 SGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVAL 70
S S G+ +A DV VPDQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C++A AL
Sbjct: 11 STASSSGAWKAGDV-VPDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETAL 69
Query: 71 DILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIT----DGRVSAVMRGIRHGA 126
+LR K FD+V+SDVHMPDMDGFKLLEHIGLEMDLPVI DG+ VM+G+ HGA
Sbjct: 70 SLLRGNKSGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGK-HVVMKGVTHGA 128
Query: 127 CDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGT 186
CDYLIKP+R E LKNIWQHVVRKR NE K+ E SGS+E+ D ++ S++++Y+SS N
Sbjct: 129 CDYLIKPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEDGDRQQKPSEDVDYSSSAN--- 185
Query: 187 EGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKR 246
EG +K ++R K+E+D E DD ST KKPRVVWSVELHQQFV+AVNQLGIDKAVPK+
Sbjct: 186 EGNWKNSKRR---KDEEDDAEERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKK 242
Query: 247 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETNV-KLG 304
ILELMNVPGLTRENVASH LQK+RLYL+RL+GVSQ Q G+ NSF P E +
Sbjct: 243 ILELMNVPGLTRENVASH-----LQKYRLYLRRLSGVSQHQNGLNNSFMGPQEATFGSIS 297
Query: 305 SLGRFDIQALAASGQIPPQTLAALHAELLGRPTGNL---VTAVDQPALLQATLQGPK 358
SL D+Q LA +GQ+P Q+LA L A LGR TG + VDQ L + + PK
Sbjct: 298 SLNGLDLQTLAVAGQLPAQSLATLQAAGLGRSTGKSGLPMPLVDQRNLF--SFEAPK 352
>gi|356564542|ref|XP_003550512.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 677
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/339 (62%), Positives = 248/339 (73%), Gaps = 24/339 (7%)
Query: 11 SGGSGYGSSRAADV------AVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCS 64
S G G S+ A V AV DQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C+
Sbjct: 4 SNGKGSMSTLTASVVMKSGDAVSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCN 63
Query: 65 QAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIT----DGRVSAVMR 120
+A AL +LRE K FD+V+SDVHMPDMDGFKLLEHIGLEMDLPVI DG+ S VM+
Sbjct: 64 RAETALSLLRENKNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGK-SVVMK 122
Query: 121 GIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYAS 180
G+ HGACDYLIKP+R E LKNIWQHVVRKR NE K+ E SGS EE D H + SDE +Y+S
Sbjct: 123 GVTHGACDYLIKPVRIEALKNIWQHVVRKRKNEWKDAEQSGSAEEGDRHPKASDEADYSS 182
Query: 181 SVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGID 240
S N EG+++ +KR +EE + ++ ST KKPRVVWSVELHQQFV+AV+QLGID
Sbjct: 183 SAN---EGSWRNSKKRRDEEEEAEDRDDT---STLKKPRVVWSVELHQQFVAAVDQLGID 236
Query: 241 KAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIET 299
KAVPK+ILELMNVPGLTRENVASH LQK+RLYL+RL+GVSQ Q + NSF P E
Sbjct: 237 KAVPKKILELMNVPGLTRENVASH-----LQKYRLYLRRLSGVSQHQNNLNNSFLGPQEA 291
Query: 300 NV-KLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPT 337
+ S+ D+Q LA +GQ+P Q+LA L A LGR T
Sbjct: 292 TFGTISSINGIDLQTLAVAGQLPAQSLATLQAAGLGRST 330
>gi|255556280|ref|XP_002519174.1| sensor histidine kinase, putative [Ricinus communis]
gi|223541489|gb|EEF43038.1| sensor histidine kinase, putative [Ricinus communis]
Length = 682
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/336 (62%), Positives = 250/336 (74%), Gaps = 22/336 (6%)
Query: 11 SGGSGYGSSRAADVA------VPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCS 64
S G G S+ ++ VA VPDQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C+
Sbjct: 4 SNGKGSMSTASSSVAWKAGEVVPDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCN 63
Query: 65 QAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRG 121
+A AL +LRE K +D+V+SDVHMPDMDGFKLLEHIGLEMDLPVI D S VM+G
Sbjct: 64 RAETALSLLRENKNGYDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADEAKSVVMKG 123
Query: 122 IRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASS 181
+ HGACDYLIKP+R E LKNIWQHVVRK+ NE K+ E SGS+EE D + S++ +Y+SS
Sbjct: 124 VTHGACDYLIKPVRIEALKNIWQHVVRKKRNEWKDLEQSGSVEEGDRQPKQSEDADYSSS 183
Query: 182 VNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDK 241
N EG ++ +KR K+E++ E DD ST KKPRVVWSVELHQQFV+AVNQLGIDK
Sbjct: 184 AN---EGNWRNSKKR---KDEEEEGDERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDK 237
Query: 242 AVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIE-T 299
AVPK+ILELMNVPGLTRENVASH LQK+RLYL+RL+GVSQ Q + N+F +P E T
Sbjct: 238 AVPKKILELMNVPGLTRENVASH-----LQKYRLYLRRLSGVSQHQNNLGNAFISPQEAT 292
Query: 300 NVKLGSLGRFDIQALAASGQIPPQTLAALHAELLGR 335
L S D+Q LAA+GQ+P Q+LA L A LGR
Sbjct: 293 YGPLSSFNGIDLQTLAATGQLPAQSLATLQAAGLGR 328
>gi|33330870|gb|AAQ10678.1| type-B response regulator [Catharanthus roseus]
Length = 643
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/403 (52%), Positives = 277/403 (68%), Gaps = 36/403 (8%)
Query: 14 SGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL 73
S S ++ V DQFPAGLRVLVVDDD TCLRILE+ML+ CLY VT C++A +AL +L
Sbjct: 16 SSSASWKSGGDGVSDQFPAGLRVLVVDDDPTCLRILEKMLKNCLYEVTKCNRAEIALKLL 75
Query: 74 RERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYL 130
R+ + +D+V+SDVHMPDMDGFKLLE +GLEMDLPVI D + VM+G+ HGACDYL
Sbjct: 76 RDNRNGYDIVISDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDSKNVVMKGVTHGACDYL 135
Query: 131 IKPIREEELKNIWQHVVRK---RWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTE 187
IKP+R E LKNIWQHVVRK W E K++E SGS+E+ + ++ +++++Y+SS N E
Sbjct: 136 IKPVRIEALKNIWQHVVRKGKHEWKE-KDYEQSGSVEDGERQQKPNEDVDYSSSAN---E 191
Query: 188 GTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRI 247
G +K +KR +E+ + + +S ST KKPRVVWSVELHQQFV+AVNQLGIDKAVPK+I
Sbjct: 192 GNWKNSKKRKDDEEDQEEKDDS---STLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKI 248
Query: 248 LELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCA-PIETNVKLGS 305
LELMNVPGLTRENVASH LQK+RLYL+R++GVSQ Q G+ NSF P T + S
Sbjct: 249 LELMNVPGLTRENVASH-----LQKYRLYLRRVSGVSQHQNGLNNSFMGTPDATFGSMSS 303
Query: 306 LGRFDIQALAASGQIPPQTLAALHAELLGRPTGNLVTAVDQPALLQATLQGPKCIPADHG 365
+ D QALAA+GQIP Q+LA+L A +GRPT + P + Q L + H
Sbjct: 304 INGLDFQALAATGQIPAQSLASLQAAAIGRPTSK--PTISMPVVDQRNLFSFE----PHK 357
Query: 366 VAFG---QQL------VKCQSNVPENL-PQSIISVDDASTGFG 398
+ FG QQL + +P N+ P+ + S++ ++ FG
Sbjct: 358 LRFGEGQQQLNGSTKQISLLHGIPTNMEPKQLASLNQSAQTFG 400
>gi|298103716|emb|CBM42559.1| putative B-type response regulator 13 [Populus x canadensis]
Length = 670
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/326 (64%), Positives = 250/326 (76%), Gaps = 19/326 (5%)
Query: 19 SRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKG 78
S A+ V DQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C++A +AL +LRE +
Sbjct: 2 STASSGGVSDQFPAGLRVLVVDDDPTCLVILEKMLRTCLYEVTKCNRAEIALSLLRENRN 61
Query: 79 CFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIT----DGRVSAVMRGIRHGACDYLIKPI 134
+D+V+SDVHMPDMDGFKLLE IGLEMDLPVI DG+ + VM+G+ HGACDYLIKPI
Sbjct: 62 GYDIVISDVHMPDMDGFKLLELIGLEMDLPVIMMSADDGK-NVVMKGVTHGACDYLIKPI 120
Query: 135 REEELKNIWQHVVRKRWNENKEHENSGSLEE-TDHHKRGSDEIEYASSVNEGTEGTFKAQ 193
R E LKNIWQHVVRKR NE K+ E SGS+EE D ++ S++ +Y+SS N EG++K
Sbjct: 121 RIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGGDRPQKQSEDADYSSSAN---EGSWKNS 177
Query: 194 RKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNV 253
++R K+E++ E DD ST KKPRVVWSVELHQQFV+AVNQLGIDKAVPK+ILELMNV
Sbjct: 178 KRR---KDEEEEADERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNV 234
Query: 254 PGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIE-TNVKLGSLGRFDI 311
PGLTRENVASH LQK+RLYL+RL+GVSQ Q G+ NSF +P E T L SL D+
Sbjct: 235 PGLTRENVASH-----LQKYRLYLRRLSGVSQHQSGMGNSFISPQEATYGPLSSLNGLDL 289
Query: 312 QALAASGQIPPQTLAALHAELLGRPT 337
Q LAA+GQIP Q+LA L A LGR T
Sbjct: 290 QTLAAAGQIPAQSLATLQAAGLGRST 315
>gi|356529278|ref|XP_003533222.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 673
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 241/470 (51%), Positives = 291/470 (61%), Gaps = 57/470 (12%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
GS S A V DQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C +A VAL +
Sbjct: 8 GSTSSSPLKAGDTVSDQFPAGLRVLVVDDDPTCLMILERMLRACLYEVTKCKRAEVALSL 67
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIT----DGRVSAVMRGIRHGACD 128
LRE K FD+VLSDVHMPDMDGFKLLEHIGLEMDLPVI DG+ VM+G+ HGACD
Sbjct: 68 LRENKNGFDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGK-QVVMKGVTHGACD 126
Query: 129 YLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEG 188
YLIKP+R E LKNIWQHVVR R N ++ E SGS+EE D +GSD+ Y+SSVNE
Sbjct: 127 YLIKPVRIEALKNIWQHVVRMRKNGLRDVEQSGSMEEGDRPPKGSDDGNYSSSVNEA--- 183
Query: 189 TFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRIL 248
K+ +KR EE D +S ST KKPRVVWSVELHQQF++ VNQLGIDKAVPK+IL
Sbjct: 184 --KSSKKRRDEDEEGDERDDS---STLKKPRVVWSVELHQQFMAVVNQLGIDKAVPKKIL 238
Query: 249 ELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLG 307
ELMNVPGLTRENVASH LQK+RLYL+RL+GVS QQG ++NSF + E S+
Sbjct: 239 ELMNVPGLTRENVASH-----LQKYRLYLRRLSGVSQQQGNLSNSFMSSQEATFGGTSIN 293
Query: 308 RFDIQALAASGQIPPQTLAALHAELLGRPT---GNLVTAVDQPALLQATLQGPKCIPADH 364
D+Q L+A+GQ P Q+LA A LGR T G ++ DQ L + + P+
Sbjct: 294 GIDLQTLSAAGQFPSQSLAKFQAAGLGRTTAKAGMPMSLSDQKNLF--SFENPR------ 345
Query: 365 GVAFGQQLVKCQSNV-PENLPQSIISVDDASTGFGVWASNSLGAVASTSNLGGLN----- 418
+ FG+ ++ SN P NL I++ + ST LG LN
Sbjct: 346 -LRFGEGSLQHLSNSKPINLLHGILT--------NMEPKQLANLHQSTQPLGSLNMRVNS 396
Query: 419 --PQNGNMLMDILHQQQQKQQNQQSQQQSTLSETSRS-ISVQPSCLVVPS 465
QN +LM + Q + Q LSE + S ++ PS LV P+
Sbjct: 397 PATQNKPLLMQMTQSQPRGQ---------LLSENASSHVTRYPSSLVQPT 437
>gi|356556050|ref|XP_003546340.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 672
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/335 (62%), Positives = 246/335 (73%), Gaps = 23/335 (6%)
Query: 11 SGGSGYGSS---RAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAA 67
S G G SS +A D +V DQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C +A
Sbjct: 4 SNGKGSTSSSPLKAGD-SVSDQFPAGLRVLVVDDDPTCLMILERMLRACLYEVTKCQRAE 62
Query: 68 VALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIT----DGRVSAVMRGIR 123
VAL +LRE K FD+VLSDVHMPDMDGFKLLEHIGLEMDLPVI DG+ VM+G+
Sbjct: 63 VALSLLRENKNGFDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGK-HVVMKGVT 121
Query: 124 HGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVN 183
HGACDYLIKP+R E LKNIWQHV+RKR N ++ E SGS+EE D + SD+ +Y+SSVN
Sbjct: 122 HGACDYLIKPVRIEALKNIWQHVIRKRKNGLRDVEQSGSVEEGDQPPKVSDDGDYSSSVN 181
Query: 184 EGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAV 243
E ++ +KR EE D + +S ST KKPRVVWSVELHQQF++AVNQLGIDKAV
Sbjct: 182 EA-----RSSKKRRDEDEEGDEKDDS---STLKKPRVVWSVELHQQFMAAVNQLGIDKAV 233
Query: 244 PKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVK 302
PK+ILELMNVPGLTRENVASH LQK+RLYL+RL+GVS QQG + NSF + E
Sbjct: 234 PKKILELMNVPGLTRENVASH-----LQKYRLYLRRLSGVSQQQGNLNNSFMSSQEATFG 288
Query: 303 LGSLGRFDIQALAASGQIPPQTLAALHAELLGRPT 337
S+ D+Q L+A+GQ P Q+LA L A LGR T
Sbjct: 289 GTSINGIDLQTLSAAGQFPSQSLAKLQATGLGRTT 323
>gi|449464732|ref|XP_004150083.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
gi|449501499|ref|XP_004161384.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
Length = 673
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/351 (58%), Positives = 253/351 (72%), Gaps = 26/351 (7%)
Query: 18 SSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERK 77
S+R A DQFPAGLRVLVVDDD TCL+ILE+ML+ C Y VT C++A +AL +LRE K
Sbjct: 21 SARKATDMSSDQFPAGLRVLVVDDDPTCLKILEKMLQNCCYAVTKCNRAEIALSMLRENK 80
Query: 78 GCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIT----DGRVSAVMRGIRHGACDYLIKP 133
FD+VLSDVHMPDMDGFKLLE +GLEMDLPVI DG+ + VM+G+ HGACDYLIKP
Sbjct: 81 NGFDIVLSDVHMPDMDGFKLLEQVGLEMDLPVIMMSADDGK-NVVMKGVIHGACDYLIKP 139
Query: 134 IREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQ 193
+R E L+N+WQHVVRKR E K+ E SGS++E D + S+ Y+SS EG++ +
Sbjct: 140 VRIEALRNLWQHVVRKRKTEWKDLEQSGSVDEGDREQNLSEGANYSSS---AYEGSWNSS 196
Query: 194 RKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNV 253
++R A+EE + E DD ST KKPRVVWSVELHQQFV+AVNQLGIDKAVPK+ILELMNV
Sbjct: 197 KRRRDAEEEPE---ERDDTSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNV 253
Query: 254 PGLTRENVASHLQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRF--- 309
PGLTRENVASH LQK+RLYL+RL+GVS Q + NSF P + GS+G F
Sbjct: 254 PGLTRENVASH-----LQKYRLYLRRLSGVSPHQSNLNNSFINP--QDPPFGSMGSFNGI 306
Query: 310 DIQALAASGQIPPQTLAALHAELLGRPTGN--LVTAVDQPALLQATLQGPK 358
D+Q L+ +GQ+ PQ+LAAL A L RPT + A+DQ + + + PK
Sbjct: 307 DLQTLSVTGQLSPQSLAALQATGLRRPTAKSGISMALDQNNIF--SFENPK 355
>gi|224106962|ref|XP_002314325.1| type-b response regulator [Populus trichocarpa]
gi|222863365|gb|EEF00496.1| type-b response regulator [Populus trichocarpa]
Length = 634
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 249/326 (76%), Gaps = 19/326 (5%)
Query: 19 SRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKG 78
S A+ V DQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C++A +AL +LRE +
Sbjct: 12 STASSGGVSDQFPAGLRVLVVDDDPTCLVILEKMLRTCLYEVTKCNRAEIALSLLRENRN 71
Query: 79 CFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIT----DGRVSAVMRGIRHGACDYLIKPI 134
+D+V+SDVHMPDMDGFKLLE IGLEMDLPVI DG+ + VM+G+ HGACDYLIKPI
Sbjct: 72 GYDIVISDVHMPDMDGFKLLELIGLEMDLPVIMMSADDGK-NVVMKGVTHGACDYLIKPI 130
Query: 135 REEELKNIWQHVVRKRWNENKEHENSGSLEE-TDHHKRGSDEIEYASSVNEGTEGTFKAQ 193
R E LKNIWQHVVRKR NE K+ E SGS+EE D ++ S++ +Y+SS N EG++K
Sbjct: 131 RIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGGDRQQKQSEDADYSSSAN---EGSWKNS 187
Query: 194 RKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNV 253
++R K+E++ E DD ST KKPRVVWSVELHQQFV+AV+QLGIDKAVPK+ILELMNV
Sbjct: 188 KRR---KDEEEEADERDDTSTLKKPRVVWSVELHQQFVAAVHQLGIDKAVPKKILELMNV 244
Query: 254 PGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIE-TNVKLGSLGRFDI 311
PGLTRENVASH LQK+RLYL+RL+GVSQ Q G+ NSF P E T L SL D+
Sbjct: 245 PGLTRENVASH-----LQKYRLYLRRLSGVSQHQSGMGNSFINPQEATYGPLSSLNGLDL 299
Query: 312 QALAASGQIPPQTLAALHAELLGRPT 337
Q LAA+GQIP Q+LA L A LGR T
Sbjct: 300 QTLAAAGQIPAQSLATLQAAGLGRST 325
>gi|449432892|ref|XP_004134232.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
gi|449503838|ref|XP_004162202.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
Length = 660
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/340 (60%), Positives = 247/340 (72%), Gaps = 29/340 (8%)
Query: 18 SSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERK 77
S R A AVPDQFPAGLRVLVVDDD TCL ILE+MLR C Y+VT CS+A AL +LR+ K
Sbjct: 8 SVRKAGEAVPDQFPAGLRVLVVDDDPTCLMILEKMLRICRYDVTNCSRAEDALSLLRQNK 67
Query: 78 GCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIT----DGRVSAVMRGIRHGACDYLIKP 133
FD+VLSDVHMPDMDGFKLLE+IGLEMDLPVI DG+ + VM+G+ HGACDYLIKP
Sbjct: 68 NGFDIVLSDVHMPDMDGFKLLEYIGLEMDLPVIMMSVDDGK-NVVMKGVTHGACDYLIKP 126
Query: 134 IREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQ 193
+R E LKNIWQHVVRKR NE K+ E + +++ D ++ +++ +Y+SS NEG+
Sbjct: 127 VRMEALKNIWQHVVRKRKNEWKDLEQT-CVDDVDRQQKTNEDADYSSSANEGSW------ 179
Query: 194 RKRISAKEEDDGE--LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELM 251
R S + +DD E E DD ST KKPRVVWSVELHQQFV+AVNQLGIDKAVPK+ILELM
Sbjct: 180 --RNSKRRKDDVEDPEERDDSSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELM 237
Query: 252 NVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETNVKLG-SLGRF 309
NVPGLTRENVASH LQK+RLYL+RL+G++Q Q + N+F + + G L
Sbjct: 238 NVPGLTRENVASH-----LQKYRLYLRRLSGITQHQSNLNNTFMSAQDA---FGPPLNGL 289
Query: 310 DIQALAASGQIPPQTLAALHAELLGRPT---GNLVTAVDQ 346
D+Q LAA+GQ+ PQ+LA L A GR T G + VDQ
Sbjct: 290 DLQTLAAAGQLQPQSLATLQAAGFGRSTAKSGMPMPLVDQ 329
>gi|224130444|ref|XP_002328610.1| type-b response regulator [Populus trichocarpa]
gi|222838592|gb|EEE76957.1| type-b response regulator [Populus trichocarpa]
Length = 671
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/335 (62%), Positives = 246/335 (73%), Gaps = 21/335 (6%)
Query: 10 SSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVA 69
S+ SG G +A+D A DQFPAGLRVLVVDDD TCL ILE+MLR C Y VT C++A +A
Sbjct: 12 STATSG-GVWKASDGA-SDQFPAGLRVLVVDDDPTCLVILEKMLRTCRYEVTKCNRAEIA 69
Query: 70 LDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIT----DGRVSAVMRGIRHG 125
L +LRE K +D+V+SDVHMPDMDGFKLLE IGLEMDLPVI DG+ + VM+G+ HG
Sbjct: 70 LSLLRENKNGYDIVISDVHMPDMDGFKLLEQIGLEMDLPVIMMSADDGK-NVVMKGVTHG 128
Query: 126 ACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEE-TDHHKRGSDEIEYASSVNE 184
ACDYLIKPIR E LKNIWQHVVRKR NE K+ E SGS+EE D ++ ++ +Y+SS NE
Sbjct: 129 ACDYLIKPIRIEALKNIWQHVVRKRKNEWKDLEQSGSVEEGGDRQQKQPEDADYSSSANE 188
Query: 185 GTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVP 244
G+ K ++ E E DD S KKPRVVWSVELHQQFV+AVNQLGIDKAVP
Sbjct: 189 GSWKNSKRRKDEEEEAE------ERDDTSALKKPRVVWSVELHQQFVAAVNQLGIDKAVP 242
Query: 245 KRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIE-TNVK 302
K+ILELMNVPGLTRENVASH LQK+RLYL+RL+GVSQ Q G+ +SF +P E T
Sbjct: 243 KKILELMNVPGLTRENVASH-----LQKYRLYLRRLSGVSQHQNGMGSSFISPQEATYGP 297
Query: 303 LGSLGRFDIQALAASGQIPPQTLAALHAELLGRPT 337
L SL D+Q LA +GQ+P Q+LA L A LGR T
Sbjct: 298 LSSLNGLDLQTLATAGQLPAQSLATLQAAGLGRST 332
>gi|298103714|emb|CBM42558.1| putative B-type response regulator 12 [Populus x canadensis]
Length = 690
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/335 (61%), Positives = 246/335 (73%), Gaps = 21/335 (6%)
Query: 10 SSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVA 69
S+ SG G +A+D A DQFPAGLRVLVVDDD TCL ILE+MLR C Y VT C++A +A
Sbjct: 12 STATSG-GVWKASDGA-SDQFPAGLRVLVVDDDPTCLVILEKMLRTCRYEVTKCNRAEIA 69
Query: 70 LDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIT----DGRVSAVMRGIRHG 125
L +LRE K +D+V+SDVHMPDMDGFKLLE IGLEMDLPVI DG+ + VM+G+ HG
Sbjct: 70 LSLLRENKNGYDIVISDVHMPDMDGFKLLEQIGLEMDLPVIMMSADDGK-NVVMKGVTHG 128
Query: 126 ACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEE-TDHHKRGSDEIEYASSVNE 184
ACDYLIKPIR E LKNIWQHVVRKR NE ++ E SGS+EE D ++ ++ +Y+SS NE
Sbjct: 129 ACDYLIKPIRIEALKNIWQHVVRKRKNEWRDLEQSGSVEEGGDRQQKQPEDADYSSSANE 188
Query: 185 GTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVP 244
G+ K ++ E E DD S KKPRVVWSVELHQQFV+AVNQLGIDKAVP
Sbjct: 189 GSWKNSKRRKDEEEETE------ERDDTSALKKPRVVWSVELHQQFVAAVNQLGIDKAVP 242
Query: 245 KRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIE-TNVK 302
K+ILELMNVPGLTRENVASH LQK+RLYL+R++GVSQ Q G+ ++F +P E T
Sbjct: 243 KKILELMNVPGLTRENVASH-----LQKYRLYLRRVSGVSQHQNGMGSTFISPQEATYGP 297
Query: 303 LGSLGRFDIQALAASGQIPPQTLAALHAELLGRPT 337
L SL D+Q LA +GQ+P Q+LA L A LGR T
Sbjct: 298 LSSLNGLDLQTLATAGQLPAQSLATLQAAGLGRST 332
>gi|94449082|gb|ABF19058.1| ARR2 [Arabidopsis thaliana]
gi|94449084|gb|ABF19059.1| ARR2 [Arabidopsis thaliana]
Length = 664
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 199/344 (57%), Positives = 243/344 (70%), Gaps = 24/344 (6%)
Query: 7 IVQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQA 66
+V G G S AA + D FPA LRVLVVDDD TCL ILE+ML CLY VT C++A
Sbjct: 1 MVNPGHGRGPDSGTAAGGSNSDPFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRA 60
Query: 67 AVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIR 123
+AL +LR+ K FD+V+SDVHMPDMDGFKLLEH+GLEMDLPVI D S V++G+
Sbjct: 61 EIALSLLRKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVT 120
Query: 124 HGACDYLIKPIREEELKNIWQHVVRKRWNE-NKEHENSGSLEET-------DHHKRGSDE 175
HGA DYLIKP+R E LKNIWQHVVRK+ NE N + GS+E+T H+ +D
Sbjct: 121 HGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDAD- 179
Query: 176 IEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVN 235
+SSVNEG ++ RKR + +D G+ + +D S+ KKPRVVWSVELHQQFV+AVN
Sbjct: 180 -NNSSSVNEGNG---RSSRKRKEEEVDDQGD-DKEDSSSLKKPRVVWSVELHQQFVAAVN 234
Query: 236 QLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITN-SFC 294
QLG+DKAVPK+ILE+MNVPGLTRENVASH LQK+R+YL+RL GVSQ GI N SF
Sbjct: 235 QLGVDKAVPKKILEMMNVPGLTRENVASH-----LQKYRIYLRRLGGVSQHQGIMNHSFM 289
Query: 295 APIETNV-KLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPT 337
+ + L SL FD+Q+LA +GQ+PPQ+LA L A LGRPT
Sbjct: 290 TGQDQSFGPLSSLNGFDLQSLAVTGQLPPQSLAQLQAAGLGRPT 333
>gi|357449081|ref|XP_003594816.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355483864|gb|AES65067.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 606
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 194/316 (61%), Positives = 231/316 (73%), Gaps = 19/316 (6%)
Query: 26 VPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLS 85
V DQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C +A VAL +LRE K FD+VLS
Sbjct: 25 VSDQFPAGLRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLS 84
Query: 86 DVHMPDMDGFKLLEHIGLEMDLPVIT----DGRVSAVMRGIRHGACDYLIKPIREEELKN 141
DVHMPDMDGFKLLEHIGLEMDLPVI DG+ + VM+G+ HGACDYLIKP+R E LKN
Sbjct: 85 DVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGK-NVVMKGVTHGACDYLIKPVRIEALKN 143
Query: 142 IWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKE 201
IWQHVVRKR N K+ SG L+E D K+ S + Y+SS NEG K+ +KR ++
Sbjct: 144 IWQHVVRKRKNSWKDLRQSGGLDERDREKKASTDANYSSSTNEG-----KSSKKRRDEED 198
Query: 202 EDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENV 261
E D + ST+KKPRVVWS+ELHQQF++ VNQLG+DKAVPK+I+E+MNVPGLTRENV
Sbjct: 199 EADDRDDC---STSKKPRVVWSIELHQQFMAVVNQLGLDKAVPKKIMEMMNVPGLTRENV 255
Query: 262 ASHLQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQI 320
ASH LQK+RLYL+RL+GVS QQ + NSF + E+ S+ D+Q L+ASGQ
Sbjct: 256 ASH-----LQKYRLYLRRLSGVSQQQSNLNNSFMSAQESIFGGTSVNEIDLQTLSASGQF 310
Query: 321 PPQTLAALHAELLGRP 336
Q+LA L A L P
Sbjct: 311 SAQSLAKLQAAGLYSP 326
>gi|240255903|ref|NP_193346.4| two-component response regulator ARR2 [Arabidopsis thaliana]
gi|50400708|sp|Q9ZWJ9.1|ARR2_ARATH RecName: Full=Two-component response regulator ARR2; AltName:
Full=Receiver-like protein 5
gi|4210451|dbj|BAA74527.1| ARR2 protein [Arabidopsis thaliana]
gi|51969616|dbj|BAD43500.1| hypothetical protein [Arabidopsis thaliana]
gi|51970060|dbj|BAD43722.1| hypothetical protein [Arabidopsis thaliana]
gi|51971425|dbj|BAD44377.1| hypothetical protein [Arabidopsis thaliana]
gi|94958295|gb|ABF47278.1| ARR2 [Arabidopsis thaliana]
gi|94958297|gb|ABF47279.1| ARR2 [Arabidopsis thaliana]
gi|332658294|gb|AEE83694.1| two-component response regulator ARR2, partial [Arabidopsis
thaliana]
Length = 664
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 243/344 (70%), Gaps = 24/344 (6%)
Query: 7 IVQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQA 66
+V G G S AA + D FPA LRVLVVDDD TCL ILE+ML CLY VT C++A
Sbjct: 1 MVNPGHGRGPDSGTAAGGSNSDPFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRA 60
Query: 67 AVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIR 123
AL +LR+ K FD+V+SDVHMPDMDGFKLLEH+GLEMDLPVI D S V++G+
Sbjct: 61 ESALSLLRKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVT 120
Query: 124 HGACDYLIKPIREEELKNIWQHVVRKRWNE-NKEHENSGSLEET-------DHHKRGSDE 175
HGA DYLIKP+R E LKNIWQHVVRK+ NE N + GS+E+T H+ +D
Sbjct: 121 HGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDAD- 179
Query: 176 IEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVN 235
+SSVNEG ++ RKR + +D G+ + +D S+ KKPRVVWSVELHQQFV+AVN
Sbjct: 180 -NNSSSVNEGNG---RSSRKRKEEEVDDQGD-DKEDSSSLKKPRVVWSVELHQQFVAAVN 234
Query: 236 QLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFC 294
QLG+DKAVPK+ILE+MNVPGLTRENVASH LQK+R+YL+RL GVSQ QG + +SF
Sbjct: 235 QLGVDKAVPKKILEMMNVPGLTRENVASH-----LQKYRIYLRRLGGVSQHQGNMNHSFM 289
Query: 295 APIETNV-KLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPT 337
+ + L SL FD+Q+LA +GQ+PPQ+LA L A LGRPT
Sbjct: 290 TGQDQSFGPLSSLNGFDLQSLAVTGQLPPQSLAQLQAAGLGRPT 333
>gi|42570473|ref|NP_850600.2| two-component response regulator ARR1 [Arabidopsis thaliana]
gi|222423228|dbj|BAH19591.1| AT3G16857 [Arabidopsis thaliana]
gi|332642354|gb|AEE75875.1| two-component response regulator ARR1 [Arabidopsis thaliana]
Length = 669
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 194/332 (58%), Positives = 238/332 (71%), Gaps = 26/332 (7%)
Query: 25 AVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVL 84
V + FP+GLRVLVVDDD TCL ILE+MLR CLY VT C++A +AL +LR+ K FD+V+
Sbjct: 28 TVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVI 87
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKN 141
SDVHMPDMDGFKLLEH+GLEMDLPVI D S V++G+ HGA DYLIKP+R E LKN
Sbjct: 88 SDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKN 147
Query: 142 IWQHVVRKRWNENKEHENSGSLEETDHHKR--------------GSDEI-EYASSVNEGT 186
IWQHVVRKR +E E+SGS+EET ++ G D + + +SSVNEG
Sbjct: 148 IWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGN 207
Query: 187 EGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKR 246
+ RKR + E+ G+ + +D S KKPRVVWSVELHQQFV+AVNQLG++KAVPK+
Sbjct: 208 NWR-SSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKK 266
Query: 247 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETNV-KLG 304
ILELMNVPGLTRENVASH LQK+R+YL+RL GVSQ QG + NSF + + L
Sbjct: 267 ILELMNVPGLTRENVASH-----LQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLS 321
Query: 305 SLGRFDIQALAASGQIPPQTLAALHAELLGRP 336
+L FD+QALA +GQ+P Q+LA L A LGRP
Sbjct: 322 TLNGFDLQALAVTGQLPAQSLAQLQAAGLGRP 353
>gi|4210449|dbj|BAA74528.1| ARR1 protein [Arabidopsis thaliana]
Length = 669
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 194/332 (58%), Positives = 238/332 (71%), Gaps = 26/332 (7%)
Query: 25 AVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVL 84
V + FP+GLRVLVVDDD TCL ILE+MLR CLY VT C++A +AL +LR+ K FD+V+
Sbjct: 28 TVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVI 87
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKN 141
SDVHMPDMDGFKLLEH+GLEMDLPVI D S V++G+ HGA DYLIKP+R E LKN
Sbjct: 88 SDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKN 147
Query: 142 IWQHVVRKRWNENKEHENSGSLEETDHHKR--------------GSDEI-EYASSVNEGT 186
IWQHVVRKR +E E+SGS+EET ++ G D + + +SSVNEG
Sbjct: 148 IWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGN 207
Query: 187 EGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKR 246
+ RKR + E+ G+ + +D S KKPRVVWSVELHQQFV+AVNQLG++KAVPK+
Sbjct: 208 NWR-SSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKK 266
Query: 247 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETNV-KLG 304
ILELMNVPGLTRENVASH LQK+R+YL+RL GVSQ QG + NSF + + L
Sbjct: 267 ILELMNVPGLTRENVASH-----LQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLS 321
Query: 305 SLGRFDIQALAASGQIPPQTLAALHAELLGRP 336
+L FD+QALA +GQ+P Q+LA L A LGRP
Sbjct: 322 TLNGFDLQALAVTGQLPAQSLAQLQAAGLGRP 353
>gi|15810171|gb|AAL06987.1| AT3g16857/MUH15_1 [Arabidopsis thaliana]
Length = 690
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 194/332 (58%), Positives = 238/332 (71%), Gaps = 26/332 (7%)
Query: 25 AVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVL 84
V + FP+GLRVLVVDDD TCL ILE+MLR CLY VT C++A +AL +LR+ K FD+V+
Sbjct: 28 TVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVI 87
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKN 141
SDVHMPDMDGFKLLEH+GLEMDLPVI D S V++G+ HGA DYLIKP+R E LKN
Sbjct: 88 SDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKN 147
Query: 142 IWQHVVRKRWNENKEHENSGSLEETDHHKR--------------GSDEI-EYASSVNEGT 186
IWQHVVRKR +E E+SGS+EET ++ G D + + +SSVNEG
Sbjct: 148 IWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGN 207
Query: 187 EGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKR 246
+ RKR + E+ G+ + +D S KKPRVVWSVELHQQFV+AVNQLG++KAVPK+
Sbjct: 208 NWR-SSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKK 266
Query: 247 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETNV-KLG 304
ILELMNVPGLTRENVASH LQK+R+YL+RL GVSQ QG + NSF + + L
Sbjct: 267 ILELMNVPGLTRENVASH-----LQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLS 321
Query: 305 SLGRFDIQALAASGQIPPQTLAALHAELLGRP 336
+L FD+QALA +GQ+P Q+LA L A LGRP
Sbjct: 322 TLNGFDLQALAVTGQLPAQSLAQLQAAGLGRP 353
>gi|42564262|ref|NP_566561.2| two-component response regulator ARR1 [Arabidopsis thaliana]
gi|50400604|sp|Q940D0.2|ARR1_ARATH RecName: Full=Two-component response regulator ARR1
gi|11994744|dbj|BAB03073.1| ARR1 protein [Arabidopsis thaliana]
gi|51971120|dbj|BAD44252.1| putative ARR1 protein [Arabidopsis thaliana]
gi|332642355|gb|AEE75876.1| two-component response regulator ARR1 [Arabidopsis thaliana]
Length = 690
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 194/332 (58%), Positives = 238/332 (71%), Gaps = 26/332 (7%)
Query: 25 AVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVL 84
V + FP+GLRVLVVDDD TCL ILE+MLR CLY VT C++A +AL +LR+ K FD+V+
Sbjct: 28 TVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVI 87
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKN 141
SDVHMPDMDGFKLLEH+GLEMDLPVI D S V++G+ HGA DYLIKP+R E LKN
Sbjct: 88 SDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKN 147
Query: 142 IWQHVVRKRWNENKEHENSGSLEETDHHKR--------------GSDEI-EYASSVNEGT 186
IWQHVVRKR +E E+SGS+EET ++ G D + + +SSVNEG
Sbjct: 148 IWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGN 207
Query: 187 EGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKR 246
+ RKR + E+ G+ + +D S KKPRVVWSVELHQQFV+AVNQLG++KAVPK+
Sbjct: 208 NWR-SSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKK 266
Query: 247 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETNV-KLG 304
ILELMNVPGLTRENVASH LQK+R+YL+RL GVSQ QG + NSF + + L
Sbjct: 267 ILELMNVPGLTRENVASH-----LQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLS 321
Query: 305 SLGRFDIQALAASGQIPPQTLAALHAELLGRP 336
+L FD+QALA +GQ+P Q+LA L A LGRP
Sbjct: 322 TLNGFDLQALAVTGQLPAQSLAQLQAAGLGRP 353
>gi|312282885|dbj|BAJ34308.1| unnamed protein product [Thellungiella halophila]
Length = 380
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 194/322 (60%), Positives = 235/322 (72%), Gaps = 31/322 (9%)
Query: 24 VAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVV 83
+ + DQFP+GLRVLVVDDD +CLRILEQML R +Y VT CSQA VAL+ILRERKGCFD+V
Sbjct: 1 MTISDQFPSGLRVLVVDDDTSCLRILEQMLLRLMYQVTICSQADVALNILRERKGCFDLV 60
Query: 84 LSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELK 140
LSDVHMP M+G+KLL+ +GLEMDLPVI DGR + VM+GI HGACDYLIKPIR EELK
Sbjct: 61 LSDVHMPGMNGYKLLQQVGLEMDLPVIMMSVDGRTTTVMKGINHGACDYLIKPIRPEELK 120
Query: 141 NIWQHVVRKRWNENKE-HENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISA 199
NIWQHVVR++W NKE NS +LE+ +K S +E SV+E +E + + KR
Sbjct: 121 NIWQHVVRRKWTMNKELQRNSQALED---NKNSSSSLETVFSVSECSEESKLRKNKRRVD 177
Query: 200 KEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 259
+E+++ + D + +KK RVVWS+ELHQQF SAVN LGI+KAVPKRILELMNVPGL+RE
Sbjct: 178 REDNEEDDLLDPGNNSKKSRVVWSIELHQQFASAVNHLGIEKAVPKRILELMNVPGLSRE 237
Query: 260 NVASHLQEINLQKFRLYLKRLN-GVSQQGGITNSFCAPIETNVKLGSLGRFD-IQALAAS 317
NVASH LQK+RLYL+RL+ GV+ Q T S+ R++ IQAL +S
Sbjct: 238 NVASH-----LQKYRLYLRRLSGGVASQIRDTE-------------SMERYENIQALVSS 279
Query: 318 GQIPPQTLAALHAELLGRPTGN 339
GQIPPQTLAA L GRP N
Sbjct: 280 GQIPPQTLAA----LFGRPVDN 297
>gi|388493620|gb|AFK34876.1| unknown [Medicago truncatula]
Length = 606
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 191/310 (61%), Positives = 228/310 (73%), Gaps = 19/310 (6%)
Query: 26 VPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLS 85
V DQFPAGLRVLVVDDD TCL ILE+MLR CLY VT C +A VAL +LRE K FD+VLS
Sbjct: 25 VSDQFPAGLRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNGFDIVLS 84
Query: 86 DVHMPDMDGFKLLEHIGLEMDLPVIT----DGRVSAVMRGIRHGACDYLIKPIREEELKN 141
DVHMPDMDGFKLLEHIGLEMDLPVI DG+ + VM+G+ HGACDYLIKP+R E LKN
Sbjct: 85 DVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGK-NVVMKGVTHGACDYLIKPVRIEALKN 143
Query: 142 IWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKE 201
IWQHVVRKR N K+ SG L+E D K+ S + Y+SS NEG K+ +KR ++
Sbjct: 144 IWQHVVRKRKNSWKDLRQSGGLDERDREKKASTDANYSSSTNEG-----KSSKKRRDEED 198
Query: 202 EDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENV 261
E D + ST+KKPRVVWS+ELHQQF++ VNQLG+DKAVPK+I+E+MNVPGLTRENV
Sbjct: 199 EADDRDDC---STSKKPRVVWSIELHQQFMAVVNQLGLDKAVPKKIMEMMNVPGLTRENV 255
Query: 262 ASHLQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQI 320
AS LQK+RLYL+RL+GVS QQ + NSF + E+ S+ D+Q L+ASGQ
Sbjct: 256 ASR-----LQKYRLYLRRLSGVSQQQSNLNNSFMSAQESIFGGTSVNEIDLQTLSASGQF 310
Query: 321 PPQTLAALHA 330
Q+LA L A
Sbjct: 311 SAQSLAKLQA 320
>gi|51968898|dbj|BAD43141.1| hypothetical protein [Arabidopsis thaliana]
Length = 664
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 242/344 (70%), Gaps = 24/344 (6%)
Query: 7 IVQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQA 66
+V G G S AA + D FPA LRVLVVD D TCL ILE+ML CLY VT C++A
Sbjct: 1 MVNPGHGRGPDSGTAAGGSNSDPFPANLRVLVVDGDPTCLMILERMLMTCLYRVTKCNRA 60
Query: 67 AVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIR 123
AL +LR+ K FD+V+SDVHMPDMDGFKLLEH+GLEMDLPVI D S V++G+
Sbjct: 61 ESALSLLRKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVT 120
Query: 124 HGACDYLIKPIREEELKNIWQHVVRKRWNE-NKEHENSGSLEET-------DHHKRGSDE 175
HGA DYLIKP+R E LKNIWQHVVRK+ NE N + GS+E+T H+ +D
Sbjct: 121 HGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDAD- 179
Query: 176 IEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVN 235
+SSVNEG ++ RKR + +D G+ + +D S+ KKPRVVWSVELHQQFV+AVN
Sbjct: 180 -NNSSSVNEGNG---RSSRKRKEEEVDDQGD-DKEDSSSLKKPRVVWSVELHQQFVAAVN 234
Query: 236 QLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFC 294
QLG+DKAVPK+ILE+MNVPGLTRENVASH LQK+R+YL+RL GVSQ QG + +SF
Sbjct: 235 QLGVDKAVPKKILEMMNVPGLTRENVASH-----LQKYRIYLRRLGGVSQHQGNMNHSFM 289
Query: 295 APIETNV-KLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPT 337
+ + L SL FD+Q+LA +GQ+PPQ+LA L A LGRPT
Sbjct: 290 TGQDQSFGPLSSLNGFDLQSLAVTGQLPPQSLAQLQAAGLGRPT 333
>gi|343407542|gb|AEM23772.1| RRB2 type-b response regulator [Nicotiana tabacum]
Length = 669
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 193/343 (56%), Positives = 242/343 (70%), Gaps = 24/343 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
+QFPAGLRVLVVDDD TCLRILE+ML C Y VT ++A AL +LRE + FD+V+SDV
Sbjct: 27 NQFPAGLRVLVVDDDPTCLRILEKMLWNCHYEVTKSNRAESALSLLRENRNGFDIVISDV 86
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLEH+GLEMDLPVI D VM+G+ HGACDYLIKP+R E LKNIWQ
Sbjct: 87 HMPDMDGFKLLEHVGLEMDLPVIMMSADDSKDVVMKGVTHGACDYLIKPVRIEALKNIWQ 146
Query: 145 HVVRKRWNE--NKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEE 202
HV+RK+ +E +K+ + S + E D ++ ++++Y+SS NEG G +K+ ++R ++E
Sbjct: 147 HVIRKKKHEWKDKDFDQSATAEAGDRQQKPPEDVDYSSSANEG--GNWKSSKRRKEEEDE 204
Query: 203 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 262
+ +S S+ KKPRVVWSVELHQQFV AVNQLGIDKAVPK+ILELMNVPGLTRENVA
Sbjct: 205 TEERDDS---SSLKKPRVVWSVELHQQFVQAVNQLGIDKAVPKKILELMNVPGLTRENVA 261
Query: 263 SHLQEINLQKFRLYLKRLNGVSQQ-GGITNSFCAPIETNVK--LGSLGRFDIQALAASGQ 319
SH LQK+RLYL+RL+GVSQ G+ NSF E+N+ S+G QALAA+ Q
Sbjct: 262 SH-----LQKYRLYLRRLSGVSQHPNGLNNSFMGHPESNIWNVFFSMG-LSFQALAATSQ 315
Query: 320 IPPQTLAALHAELLGRPTGNLVTA---VDQPALLQATLQGPKC 359
+P Q+LA L A LGR + VDQ L + + PK
Sbjct: 316 LPAQSLATLQAAALGRSATKAAISMPLVDQRNLF--SFENPKL 356
>gi|297830298|ref|XP_002883031.1| hypothetical protein ARALYDRAFT_479152 [Arabidopsis lyrata subsp.
lyrata]
gi|297328871|gb|EFH59290.1| hypothetical protein ARALYDRAFT_479152 [Arabidopsis lyrata subsp.
lyrata]
Length = 687
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 192/331 (58%), Positives = 235/331 (70%), Gaps = 27/331 (8%)
Query: 26 VPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLS 85
V + FP+GLRVLVVDDD TCL ILE+MLR CLY VT C++A +AL +LR+ K FD+V+S
Sbjct: 27 VVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVIS 86
Query: 86 DVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNI 142
DVHMPDMDGFKLLEH+GLEMDLPVI D S V++G+ HGA DYLIKP+R E LKNI
Sbjct: 87 DVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNI 146
Query: 143 WQHVVRKRWNENKEHENSGSLEETDHHKR--------------GSDEI-EYASSVNEGTE 187
WQHVVRKR +E E+SGS+EET ++ G D + + +SSVNEG
Sbjct: 147 WQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNN 206
Query: 188 GTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRI 247
+ RKR + E+ G+ + +D S KKPRVVWSVELHQQFV+AVNQLG + AVPK+I
Sbjct: 207 WR-SSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGAE-AVPKKI 264
Query: 248 LELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETNV-KLGS 305
LELMNVPGLTRENVASH LQK+R+YL+RL GVSQ QG + NSF + + L +
Sbjct: 265 LELMNVPGLTRENVASH-----LQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLST 319
Query: 306 LGRFDIQALAASGQIPPQTLAALHAELLGRP 336
L FD+QALA +GQ+P Q+LA L LGRP
Sbjct: 320 LNGFDLQALAVTGQLPAQSLAQLQVAGLGRP 350
>gi|109631196|gb|ABG35774.1| SRR384 [Striga asiatica]
Length = 569
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 182/306 (59%), Positives = 223/306 (72%), Gaps = 18/306 (5%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFPAGLRVLVVDDD TCLRILE+ML+ CLY VTTC++A +AL LR+++ +D+V+SDV
Sbjct: 25 DQFPAGLRVLVVDDDPTCLRILEKMLKNCLYEVTTCNRAGIALKFLRDKRNVYDIVISDV 84
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLEH+GLEMDLPV D + VM+G+ HGACDYLIKPIR E LKNIWQ
Sbjct: 85 HMPDMDGFKLLEHVGLEMDLPVTMMSADDSKNVVMKGVTHGACDYLIKPIRMEALKNIWQ 144
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
H+VRKR +E KE + L D K D ++Y+ SV +E + +KR K+E+D
Sbjct: 145 HLVRKRQHEWKEKDLDQHLGSVDEQKLPED-LDYSLSV---SEENWNTSKKR---KDEED 197
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
++ DD S+ KKPRVVWSVELHQQFV+AVNQLGIDKAVPK+ILELMNVPGL+RENVASH
Sbjct: 198 EAVDKDDTSSLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLSRENVASH 257
Query: 265 LQEINLQKFRLYLKRLNGVSQQGGITNSFCA-PIETNVKLGSLGRFDIQALAASGQIPP- 322
LQK+RLYL+RL+ G+ N F P + L D+QALAASGQ+PP
Sbjct: 258 -----LQKYRLYLRRLSS-QHHNGLPNPFMGLPDSPFGPMTQLSAVDLQALAASGQLPPA 311
Query: 323 QTLAAL 328
+LA +
Sbjct: 312 HSLATI 317
>gi|297804596|ref|XP_002870182.1| hypothetical protein ARALYDRAFT_915160 [Arabidopsis lyrata subsp.
lyrata]
gi|297316018|gb|EFH46441.1| hypothetical protein ARALYDRAFT_915160 [Arabidopsis lyrata subsp.
lyrata]
Length = 676
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 189/342 (55%), Positives = 238/342 (69%), Gaps = 23/342 (6%)
Query: 7 IVQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQA 66
++ G G S A + D FPA LRVLVVDDD TCL ILE+ML CLY VT C++A
Sbjct: 1 MINPGHGRGPDSGTTAGGSNSDPFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRA 60
Query: 67 AVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIR 123
+AL +LR+ K FD+V+SDVHMPDMDGFKLLEH+GLEMDLPVI D S V++G+
Sbjct: 61 EIALSLLRKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVT 120
Query: 124 HGACDYLIKPIREEELKNIWQHVVRKRWNE-NKEHENSGSLEETD-----HHKRGSDEIE 177
HGA DYLIKP+R E LKNIWQHVVRK+ N+ N + GS+E+T ++ D
Sbjct: 121 HGAVDYLIKPVRIEALKNIWQHVVRKKRNDWNVSEHSGGSIEDTGGDRDRQQQQREDADN 180
Query: 178 YASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL 237
+SS+N EG +++ RKR + ++ G+ + +D S+ KKPRVVWSVELHQQFV+AVNQL
Sbjct: 181 NSSSIN---EGNWRSSRKRKEEEVDEQGD-DKEDTSSLKKPRVVWSVELHQQFVAAVNQL 236
Query: 238 GIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAP 296
G+DKAVPK+ILE+MNVPGLTRENVASH LQK+R+YL+RL GVSQ QG + +SF
Sbjct: 237 GVDKAVPKKILEMMNVPGLTRENVASH-----LQKYRIYLRRLGGVSQHQGNMNHSFMTG 291
Query: 297 IETNV-KLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPT 337
+ + L SL FD LA +GQ+P Q+LA A LGRPT
Sbjct: 292 QDQSFGHLSSLNGFD---LAVAGQLPAQSLAQFQAAGLGRPT 330
>gi|312283277|dbj|BAJ34504.1| unnamed protein product [Thellungiella halophila]
Length = 668
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 188/332 (56%), Positives = 234/332 (70%), Gaps = 25/332 (7%)
Query: 25 AVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVL 84
+V + FP+GLRVLVVDDD TCL ILE+MLR CLY VT C++A +AL +LR+ K FD+V+
Sbjct: 26 SVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVI 85
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKN 141
SDVHMPDMDGFKLLEH+GLEMDLPVI D S V++G+ HGA DYLIKP+R E LKN
Sbjct: 86 SDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKN 145
Query: 142 IWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEI--------------EYASSVNEGTE 187
IWQHVVRKR +E E+SGS+E+T ++ + +SSVNEG
Sbjct: 146 IWQHVVRKRRSEWSVPEHSGSVEDTGERQQQQQRGGGGAAVSGGEDAADDNSSSVNEGNN 205
Query: 188 GTFKAQRKRISAKEEDDGELESD-DPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKR 246
+ ++ +E ++ + D D S KKPRVVWSVELHQQFV+AVNQLG++KAVPK+
Sbjct: 206 WRSSSSSRKRKDEEGEEQGEDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKK 265
Query: 247 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETNV-KLG 304
ILELMNVPGLTRENVASH LQK+R+YL+RL GVSQ QG + NSF + + L
Sbjct: 266 ILELMNVPGLTRENVASH-----LQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLS 320
Query: 305 SLGRFDIQALAASGQIPPQTLAALHAELLGRP 336
+L FD+QALA +GQ+P Q+LA L A LGRP
Sbjct: 321 TLNGFDLQALAVTGQLPAQSLAQLQAAGLGRP 352
>gi|302783917|ref|XP_002973731.1| type B response regulator [Selaginella moellendorffii]
gi|300158769|gb|EFJ25391.1| type B response regulator [Selaginella moellendorffii]
Length = 705
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 200/375 (53%), Positives = 238/375 (63%), Gaps = 44/375 (11%)
Query: 12 GGSGYGSS----RAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAA 67
G SGY SS + DQFP G+RVLVVDDD T L ILE MLRRC YNVTTC +A
Sbjct: 9 GQSGYISSPNLSTVSTDGSKDQFPVGMRVLVVDDDQTTLTILEAMLRRCRYNVTTCGKAT 68
Query: 68 VALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRH 124
AL +LRE K FD+V+SDV+MPDMDGFKLLE +GLEMDLPVI TDG + VM+GI H
Sbjct: 69 TALALLREHKNDFDLVISDVYMPDMDGFKLLELVGLEMDLPVIMMSTDGDYNNVMKGITH 128
Query: 125 GACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNE 184
GACDYL+KP+R EEL+NIWQH+VRKR NE +E E E G D++E+ SS
Sbjct: 129 GACDYLLKPVRMEELRNIWQHLVRKRKNEARETETLTPAEADKLKGGGGDDVEHLSSA-- 186
Query: 185 GTEGTFKAQRKRISAKEEDDG-ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAV 243
+KR KEED+G + +S+DPS+ KKPRVVWSVELHQQFV+AVN+L IDKAV
Sbjct: 187 -------CSKKRKDVKEEDEGVDHDSEDPSSLKKPRVVWSVELHQQFVNAVNKLNIDKAV 239
Query: 244 PKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFC---APIETN 300
PK+ILELM+VPGLTRENVASH LQK+RLYLKR++ Q SF P+E
Sbjct: 240 PKKILELMDVPGLTRENVASH-----LQKYRLYLKRISAQQPQNSAGFSFGGADGPVEGR 294
Query: 301 VKLGSLGRFDIQALAASGQIPPQTLAALHAELLGR--PTGNL--VTAVDQPALLQATLQG 356
G F +QA+ A Q ++GR T NL TA+DQ LLQ + G
Sbjct: 295 ----GHGSFSLQAVPAVQQ-----------GVIGRIGTTNNLPASTALDQSGLLQLSGGG 339
Query: 357 PKCIPADHGVAFGQQ 371
P P FG Q
Sbjct: 340 PVFRPNMTPPVFGSQ 354
>gi|297814420|ref|XP_002875093.1| hypothetical protein ARALYDRAFT_904389 [Arabidopsis lyrata subsp.
lyrata]
gi|297320931|gb|EFH51352.1| hypothetical protein ARALYDRAFT_904389 [Arabidopsis lyrata subsp.
lyrata]
Length = 386
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 185/326 (56%), Positives = 233/326 (71%), Gaps = 36/326 (11%)
Query: 24 VAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVV 83
+A+ DQFP+GLR+L+VDDD +CL ILE+ML R +Y VT CSQA VAL ILRERK FD+V
Sbjct: 1 MAINDQFPSGLRILLVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLV 60
Query: 84 LSDVHMPDMDGFKLLEHIG-LEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEEL 139
LSDVHMP M+G+KLL+ +G LE+DLPVI DGR + VM GI HGACDYLIKPIR EEL
Sbjct: 61 LSDVHMPGMNGYKLLQQVGLLELDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEEL 120
Query: 140 KNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISA 199
KNIWQHVVR++ + KE NS +LE+ + S +E SV+E +EG+ +RK+
Sbjct: 121 KNIWQHVVRRKCVKKKELRNSQALEDN----KNSGSLETVFSVSECSEGSLMKRRKKKKK 176
Query: 200 -----KEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVP 254
+E+++ +L+ DP +KK RVVWS+ELHQQFV+AVN+L IDKAVPKRILELMNVP
Sbjct: 177 KRSVDREDNENDLDLLDPGNSKKSRVVWSIELHQQFVNAVNKLEIDKAVPKRILELMNVP 236
Query: 255 GLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFD-IQA 313
GL+RENVASH LQKFR+YLKRL+G + Q T S+ R++ IQA
Sbjct: 237 GLSRENVASH-----LQKFRMYLKRLSGEASQNNDTE-------------SIKRYENIQA 278
Query: 314 LAASGQIPPQTLAALHAELLGRPTGN 339
L +SGQ+ PQTLAAL+ G+P N
Sbjct: 279 LVSSGQLHPQTLAALY----GQPIDN 300
>gi|302788023|ref|XP_002975781.1| hypothetical protein SELMODRAFT_150746 [Selaginella moellendorffii]
gi|300156782|gb|EFJ23410.1| hypothetical protein SELMODRAFT_150746 [Selaginella moellendorffii]
Length = 660
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 188/346 (54%), Positives = 226/346 (65%), Gaps = 34/346 (9%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVLVVDDD T L ILE MLRRC YNVTTC +A AL +LRE K FD+V+SDV+MPDMD
Sbjct: 1 MRVLVVDDDQTTLTILEAMLRRCRYNVTTCGKATTALALLREHKNDFDLVISDVYMPDMD 60
Query: 94 GFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 150
GFKLLE +GLEMDLPVI TDG + VM+GI HGACDYL+KP+R EEL+NIWQH+VRKR
Sbjct: 61 GFKLLELVGLEMDLPVIMMSTDGDYNNVMKGITHGACDYLLKPVRMEELRNIWQHLVRKR 120
Query: 151 WNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDG-ELES 209
NE +E E E G D++E+ SS +KR KEED+G + +S
Sbjct: 121 KNEARETETLTPAEADKLKGGGGDDVEHLSSA---------CSKKRKDVKEEDEGVDHDS 171
Query: 210 DDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEIN 269
+DPS+ KKPRVVWSVELHQQFV+AVN+L IDKAVPK+ILELM+VPGLTRENVASH
Sbjct: 172 EDPSSLKKPRVVWSVELHQQFVNAVNKLNIDKAVPKKILELMDVPGLTRENVASH----- 226
Query: 270 LQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQTLAALH 329
LQK+RLYLKR++ Q SF ++ + G F +QA+ A Q
Sbjct: 227 LQKYRLYLKRISAQQPQNSAGFSFGG-VDGPAEGRGHGSFSLQAVPAVQQ---------- 275
Query: 330 AELLGR--PTGNL--VTAVDQPALLQATLQGPKCIPADHGVAFGQQ 371
+LGR T NL TA+DQ LLQ + GP P FG Q
Sbjct: 276 -GVLGRIGTTNNLPASTALDQSGLLQLSGGGPVFRPNMTPPVFGSQ 320
>gi|302794410|ref|XP_002978969.1| type B response regulator [Selaginella moellendorffii]
gi|300153287|gb|EFJ19926.1| type B response regulator [Selaginella moellendorffii]
Length = 580
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 189/365 (51%), Positives = 236/365 (64%), Gaps = 49/365 (13%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+FPAGLRVL VDDD TCLRIL QMLR+C Y VT C++A AL +LRE K FD+++SDV
Sbjct: 19 KFPAGLRVLAVDDDPTCLRILAQMLRKCSYEVTMCTRATEALSLLRENKDRFDLMISDVF 78
Query: 89 MPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
MPDMDGFKLLE++GLEMDLPVI ++G VM+G+ HGACDYLIKP+R EEL+NIWQH
Sbjct: 79 MPDMDGFKLLEYVGLEMDLPVIMTSSNGETGIVMKGVIHGACDYLIKPVRTEELRNIWQH 138
Query: 146 VVRKRWNENKEHENSGSLEETDHH-----------------KRGS--DEIEYASSVNEGT 186
VVRK+ NE ++ E SGS+E+ +R S DE E+ S G
Sbjct: 139 VVRKKRNEARDVEASGSVEDGGERNHHHHHQQQQHHSSQQQRRASTIDEGEFNSDGGGGG 198
Query: 187 EGTFKAQRKRISAKEEDDG----ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKA 242
+ +K ++R +DDG E ++DD ST KK RVVWSVELHQQFV+AVNQLGIDKA
Sbjct: 199 DPNWKLAKRR-----KDDGDETAEHDNDDSSTLKKQRVVWSVELHQQFVNAVNQLGIDKA 253
Query: 243 VPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITN----SFCAPIE 298
VPK+ILE M+V GLTRENVASH LQK+RLYL+RL+GV QG N +FC+P E
Sbjct: 254 VPKKILESMSVHGLTRENVASH-----LQKYRLYLRRLSGVQPQGSGANGHAVTFCSPAE 308
Query: 299 TN-VKLGSLGRFDIQALAASGQI---PPQTLAALHAELLGR--PTGNLVTAVDQPALLQA 352
+ L +LG +++ L S Q P LA++ LGR T VD L+Q
Sbjct: 309 ASFAALNALG--EMRTLPPSAQFQNSSPTALASIQGN-LGRTGAAAPAATLVDHSVLMQL 365
Query: 353 TLQGP 357
+ P
Sbjct: 366 SGASP 370
>gi|302824731|ref|XP_002994006.1| hypothetical protein SELMODRAFT_187683 [Selaginella moellendorffii]
gi|300138168|gb|EFJ04946.1| hypothetical protein SELMODRAFT_187683 [Selaginella moellendorffii]
Length = 376
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 188/365 (51%), Positives = 236/365 (64%), Gaps = 49/365 (13%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+FPAGLRVL VDDD TCLRIL QMLR+C Y VT C++A AL +LRE K FD+++SDV
Sbjct: 9 KFPAGLRVLAVDDDPTCLRILAQMLRKCSYEVTMCTRATEALSLLRENKDRFDLMISDVF 68
Query: 89 MPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
MPDMDGFKLLE++GLEMDLPVI ++G VM+G+ HGACDYLIKP+R EEL+NIWQH
Sbjct: 69 MPDMDGFKLLEYVGLEMDLPVIMTSSNGETGIVMKGVIHGACDYLIKPVRTEELRNIWQH 128
Query: 146 VVRKRWNENKEHENSGSLEETDHH-----------------KRGS--DEIEYASSVNEGT 186
VVRK+ NE ++ E SGS+E+ +R S DE E+ S G
Sbjct: 129 VVRKKRNEARDVEASGSVEDGGERNHHHHHQQQQHHSSQQQRRASTIDEGEFNSDGGGGG 188
Query: 187 EGTFKAQRKRISAKEEDDG----ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKA 242
+ +K ++R +DDG E ++DD ST KK RVVWSVELHQQFV+AVNQLGIDKA
Sbjct: 189 DPNWKLAKRR-----KDDGDETAEHDNDDSSTLKKQRVVWSVELHQQFVNAVNQLGIDKA 243
Query: 243 VPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITN----SFCAPIE 298
VPK+ILE M+V GLTRENVASH LQK+RLYL+RL+GV QG N +FC+P +
Sbjct: 244 VPKKILESMSVHGLTRENVASH-----LQKYRLYLRRLSGVQPQGSGANGHAVTFCSPAD 298
Query: 299 TN-VKLGSLGRFDIQALAASGQI---PPQTLAALHAELLGR--PTGNLVTAVDQPALLQA 352
+ L +LG +++ L S Q P LA++ LGR T VD L+Q
Sbjct: 299 ASFAALNALG--EMRTLPPSAQFQNSSPTALASIQGN-LGRTGAAAPAATLVDHSVLMQL 355
Query: 353 TLQGP 357
+ P
Sbjct: 356 SGASP 360
>gi|21593727|gb|AAM65694.1| putative two-component response regulator protein [Arabidopsis
thaliana]
Length = 382
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 185/324 (57%), Positives = 222/324 (68%), Gaps = 35/324 (10%)
Query: 26 VPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLS 85
+ DQFP+GLR+LVVDDD +CL ILE+ML R +Y VT CSQA VAL ILRERK FD+VLS
Sbjct: 3 INDQFPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLS 62
Query: 86 DVHMPDMDGFKLLEHIG-LEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKN 141
DVHMP M+G+ LL+ +G LEMDLPVI DGR + VM GI HGACDYLIKPIR EELKN
Sbjct: 63 DVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKN 122
Query: 142 IWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRI---- 197
IWQHVVR++ KE +S +LE D+ GS E SV+E +E + R +
Sbjct: 123 IWQHVVRRKCVMKKELRSSQALE--DNKNSGSLET-VVVSVSECSEESLMKCRNKKKKKK 179
Query: 198 -SAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGL 256
S +D+ + DP +KK RVVWS+ELHQQFV+AVN+LGIDKAVPKRILELMNVPGL
Sbjct: 180 RSVDRDDNEDDLLLDPGNSKKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPGL 239
Query: 257 TRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFD-IQALA 315
+RENVASH LQKFRLYLKRL+G + Q + S R++ IQAL
Sbjct: 240 SRENVASH-----LQKFRLYLKRLSGEASQSNDSE-------------STKRYENIQALV 281
Query: 316 ASGQIPPQTLAALHAELLGRPTGN 339
+SGQ+ PQTLAA L G+P N
Sbjct: 282 SSGQLHPQTLAA----LFGQPIDN 301
>gi|15226345|ref|NP_178285.1| two-component response regulator ARR14 [Arabidopsis thaliana]
gi|50400550|sp|Q8L9Y3.2|ARR14_ARATH RecName: Full=Two-component response regulator ARR14
gi|4220473|gb|AAD12696.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|20466520|gb|AAM20577.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|22136418|gb|AAM91287.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|330250401|gb|AEC05495.1| two-component response regulator ARR14 [Arabidopsis thaliana]
Length = 382
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 185/324 (57%), Positives = 222/324 (68%), Gaps = 35/324 (10%)
Query: 26 VPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLS 85
+ DQFP+GLR+LVVDDD +CL ILE+ML R +Y VT CSQA VAL ILRERK FD+VLS
Sbjct: 3 INDQFPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLS 62
Query: 86 DVHMPDMDGFKLLEHIG-LEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKN 141
DVHMP M+G+ LL+ +G LEMDLPVI DGR + VM GI HGACDYLIKPIR EELKN
Sbjct: 63 DVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKN 122
Query: 142 IWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRI---- 197
IWQHVVR++ KE +S +LE D+ GS E SV+E +E + R +
Sbjct: 123 IWQHVVRRKCVMKKELRSSQALE--DNKNSGSLET-VVVSVSECSEESLMKCRNKKKKKK 179
Query: 198 -SAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGL 256
S +D+ + DP +KK RVVWS+ELHQQFV+AVN+LGIDKAVPKRILELMNVPGL
Sbjct: 180 RSVDRDDNEDDLLLDPGNSKKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPGL 239
Query: 257 TRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFD-IQALA 315
+RENVASH LQKFRLYLKRL+G + Q + S R++ IQAL
Sbjct: 240 SRENVASH-----LQKFRLYLKRLSGEASQSNDSE-------------STKRYENIQALV 281
Query: 316 ASGQIPPQTLAALHAELLGRPTGN 339
+SGQ+ PQTLAA L G+P N
Sbjct: 282 SSGQLHPQTLAA----LFGQPIDN 301
>gi|449457923|ref|XP_004146697.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
gi|449505373|ref|XP_004162449.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 697
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 175/358 (48%), Positives = 232/358 (64%), Gaps = 21/358 (5%)
Query: 15 GYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILR 74
G+ + D D FP G+RVL VDDD CL++LE +LR+C Y+VTT Q+ AL +LR
Sbjct: 5 GHSVAVVGDDGATDHFPVGMRVLAVDDDPICLKVLESLLRKCQYHVTTTKQSIEALRMLR 64
Query: 75 ERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLI 131
E + FD+V+SDV+MPDMDGFKLLE +GLEMDLPVI VM+GI HGACDYL+
Sbjct: 65 ENRNKFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDTELVMKGIAHGACDYLL 124
Query: 132 KPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYA-SSVNEGTEGTF 190
KP+R EELKNIWQHV+R++ E K S + + G +E+E S + F
Sbjct: 125 KPVRIEELKNIWQHVIRRKKLEPKAKNKFPSQNKV---QNGGNEVEQGFSPTSNADSAKF 181
Query: 191 KAQRKRISAKEEDDGE---LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRI 247
+RK ++D+G+ L+SDDPS KKPRVVWSVELH++FVSAVNQLG++KAVPK+I
Sbjct: 182 NRKRKDQDDDDDDEGKENGLDSDDPSNQKKPRVVWSVELHRKFVSAVNQLGLEKAVPKKI 241
Query: 248 LELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGV-SQQGGITNSFCAPIETNVKLGSL 306
L+LMNV GLTRENVASH LQK+RLYLKR++ V SQQ + +F + T +++GSL
Sbjct: 242 LDLMNVEGLTRENVASH-----LQKYRLYLKRISNVASQQANMVATFGSKDGTYMRMGSL 296
Query: 307 -GRFDIQALAASGQIPPQTLAALH-AELLGR---PTGNLVTAVDQPALLQATLQGPKC 359
G D+ A SG++P +L++ +LGR P G + + L+Q Q C
Sbjct: 297 DGYGDLHGFAGSGRLPNSSLSSYSPVGMLGRLNSPAGMSLRGITSSGLIQQNSQNLNC 354
>gi|449455539|ref|XP_004145510.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 688
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 172/330 (52%), Positives = 225/330 (68%), Gaps = 28/330 (8%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL ILE +LRRC Y+VTT +QA +AL +LRE K FDVV+SDV
Sbjct: 12 DQFPTGMRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAVMALKLLRENKNKFDVVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI +G VM+GI HGACDYL+KP+R EELKNIWQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 131
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HV+R++ + K+ NSG+ + D S+ E ++ N G F +RK + E+DD
Sbjct: 132 HVIRRKKFDPKDRMNSGNQDRPD-----SENGEESADPN----GKFNKKRKDQNYNEDDD 182
Query: 205 GEL--ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 262
+ ++DD ST KKPRVVWSVELH++FV+AVNQLGIDKAVPK+IL+LMNV LTRENVA
Sbjct: 183 QDYGQDNDDSSTQKKPRVVWSVELHRKFVNAVNQLGIDKAVPKKILDLMNVEKLTRENVA 242
Query: 263 SHLQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRF-DIQALAASGQI 320
SH LQK+RLYLKR++ V+ QQ + + + + +++GSLG + +L Q
Sbjct: 243 SH-----LQKYRLYLKRISCVANQQANMVTALSSADPSYLRIGSLGGIGNFHSLTGPPQF 297
Query: 321 PPQTLAALHAELLGRPTGNLVTAVDQPALL 350
P + ++ PT + ++ PA +
Sbjct: 298 PNTSYRSI-------PTTGMFGRLNSPACM 320
>gi|449485185|ref|XP_004157093.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Cucumis sativus]
Length = 688
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 172/330 (52%), Positives = 225/330 (68%), Gaps = 28/330 (8%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL ILE +LRRC Y+VTT +QA +AL +LRE K FDVV+SDV
Sbjct: 12 DQFPTGMRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAVMALKLLRENKNKFDVVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI +G VM+GI HGACDYL+KP+R EELKNIWQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 131
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HV+R++ + K+ NSG+ + D S+ E ++ N G F +RK + E+DD
Sbjct: 132 HVIRRKKFDPKDRMNSGNQDRPD-----SENGEESADPN----GKFNXKRKDQNYNEDDD 182
Query: 205 GEL--ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 262
+ ++DD ST KKPRVVWSVELH++FV+AVNQLGIDKAVPK+IL+LMNV LTRENVA
Sbjct: 183 QDYGQDNDDSSTQKKPRVVWSVELHRKFVNAVNQLGIDKAVPKKILDLMNVEKLTRENVA 242
Query: 263 SHLQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRF-DIQALAASGQI 320
SH LQK+RLYLKR++ V+ QQ + + + + +++GSLG + +L Q
Sbjct: 243 SH-----LQKYRLYLKRISCVANQQANMVTALSSADPSYLRIGSLGGIGNFHSLTGPPQF 297
Query: 321 PPQTLAALHAELLGRPTGNLVTAVDQPALL 350
P + ++ PT + ++ PA +
Sbjct: 298 PNTSYRSI-------PTTGMFGRLNSPACM 320
>gi|302784610|ref|XP_002974077.1| hypothetical protein SELMODRAFT_173793 [Selaginella moellendorffii]
gi|300158409|gb|EFJ25032.1| hypothetical protein SELMODRAFT_173793 [Selaginella moellendorffii]
Length = 607
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 197/380 (51%), Positives = 240/380 (63%), Gaps = 37/380 (9%)
Query: 20 RAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGC 79
+A++ + DQFPAGLRVLVVDDD TCL IL++ML RC Y+VTTC A +AL +LRE K
Sbjct: 4 QASERDMGDQFPAGLRVLVVDDDRTCLAILKKMLLRCAYDVTTCGMARLALAMLRENKER 63
Query: 80 FDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIRE 136
FDVVLSDV MPDMDGFKLLE +GLEMDLPVI +G S VM+GI HGACDYL+KPIR
Sbjct: 64 FDVVLSDVCMPDMDGFKLLELVGLEMDLPVIMMSANGETSLVMKGIIHGACDYLLKPIRI 123
Query: 137 EELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKR 196
+ELKNIWQHV R++ N K+ + + + D KR DE S+ +KR
Sbjct: 124 KELKNIWQHVFRRKRNILKDADGA----DHDRQKRKPDE---GDSMPAAGSAAAAGSKKR 176
Query: 197 ISAKEEDDG-ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 255
KE+DD EL+ DD +T KKPRVVWSVELHQQFV+AVNQLGIDKAVPKRILELMNV G
Sbjct: 177 KEIKEDDDEFELDMDDSNTLKKPRVVWSVELHQQFVTAVNQLGIDKAVPKRILELMNVQG 236
Query: 256 LTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALA 315
LTRENVASH LQK+RLYLKRL+ QQ +T S P+ ++ ++ +
Sbjct: 237 LTRENVASH-----LQKYRLYLKRLSVAQQQNAVTMSM--PLGSDPSYNAIDNLQPHPII 289
Query: 316 ASGQIPPQTLAALHAELLGRPTGNLVTA-----VDQPALLQATLQGPKCIPADH------ 364
G Q LAAL + L + A VD P L+ P+ IP ++
Sbjct: 290 TPGS--SQALAALRSVYLRTLCSSNDPAATNGVVDPPVLVVR----PRSIPPNNQRGLLL 343
Query: 365 GVAFGQQLVKCQSNVPENLP 384
GV +QL QS VP+ P
Sbjct: 344 GVGDMEQLQ--QSQVPQMRP 361
>gi|302770951|ref|XP_002968894.1| type B response regulator [Selaginella moellendorffii]
gi|300163399|gb|EFJ30010.1| type B response regulator [Selaginella moellendorffii]
Length = 602
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 193/381 (50%), Positives = 240/381 (62%), Gaps = 39/381 (10%)
Query: 20 RAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGC 79
+A++ + DQFPAGLRVLVVDDD TCL IL++ML RC Y+VTTC A +AL +LRE K
Sbjct: 4 QASERDMGDQFPAGLRVLVVDDDRTCLAILKKMLLRCAYDVTTCGMARLALAMLRENKER 63
Query: 80 FDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIRE 136
FDVVLSDV MPDMDGFKLLE +GLEMDLPVI +G S VM+GI HGACDYL+KPIR
Sbjct: 64 FDVVLSDVCMPDMDGFKLLELVGLEMDLPVIMMSANGETSLVMKGIIHGACDYLLKPIRI 123
Query: 137 EELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKR 196
+ELKNIWQHV R++ N K+ + + + D KR DE S+ +KR
Sbjct: 124 KELKNIWQHVFRRKRNILKDADGA----DHDRQKRKPDE---GDSMPAAGSAAAAGSKKR 176
Query: 197 ISAKEEDDG-ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 255
KE+D+ EL+ DD +T KKPRVVWSVELHQQFV+AVNQLGIDKAVPKRILELMNV G
Sbjct: 177 KEIKEDDEEFELDMDDSNTLKKPRVVWSVELHQQFVTAVNQLGIDKAVPKRILELMNVQG 236
Query: 256 LTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALA 315
LTRENVASH LQK+RLYLKRL+ QQ +T S P+ ++ ++ +
Sbjct: 237 LTRENVASH-----LQKYRLYLKRLSVAQQQNAVTMSM--PLGSDPSYNAIDNLQPHPII 289
Query: 316 ASGQIPPQTLAALHAELLGRPTGNLVTAVDQPALLQATLQG------PKCIPADH----- 364
G Q LAAL + L + + + PA ++ P+ IP ++
Sbjct: 290 TPGS--SQALAALRSAYL-----RTLCSSNDPAATNGVVEPPVLVVRPRSIPPNNQRGLL 342
Query: 365 -GVAFGQQLVKCQSNVPENLP 384
GV +QL QS VP+ P
Sbjct: 343 LGVGDMEQLQ--QSQVPQMRP 361
>gi|255548782|ref|XP_002515447.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223545391|gb|EEF46896.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 663
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 176/339 (51%), Positives = 225/339 (66%), Gaps = 26/339 (7%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL +LE LRRC Y+VTT SQA AL +LRE K FD+V+SDV
Sbjct: 12 DQFPIGMRVLAVDDDPTCLLVLETFLRRCQYHVTTTSQAISALKMLRENKNKFDLVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVITDGRVS---AVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI S VM+GI HGACDYL+KP+R EELKNIWQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSAYSDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 131
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HV+R++ +NK+ N + D RGS E +N+ K Q + ++
Sbjct: 132 HVIRRKKVDNKDQNN---FDNQDKLPRGSGEATADQKLNKKR----KDQNEDEDEDRDEH 184
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
G E++DP+T KKPRVVWSVELH++FV+AVNQLG+DKAVPK+IL+LMNV LTRENVASH
Sbjct: 185 GH-ENEDPTTQKKPRVVWSVELHRKFVAAVNQLGVDKAVPKKILDLMNVEKLTRENVASH 243
Query: 265 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGS-LGRFDIQALAASGQIPP 322
LQK+RLYLKR++ V+ QQ + + + + +++GS LG Q +A +GQ
Sbjct: 244 -----LQKYRLYLKRISTVANQQANMVAALGSSDASYLQMGSGLG---FQGIAGAGQFHN 295
Query: 323 QTLAAL-HAELLGR---PTGNLVTAVDQPALLQ-ATLQG 356
T L + +LGR P G + + P ++Q LQG
Sbjct: 296 ATFRPLPPSGMLGRLNSPAGLGMRGLPSPGVIQLGQLQG 334
>gi|115449219|ref|NP_001048389.1| Os02g0796500 [Oryza sativa Japonica Group]
gi|47497030|dbj|BAD19083.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|47497239|dbj|BAD19284.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113537920|dbj|BAF10303.1| Os02g0796500 [Oryza sativa Japonica Group]
gi|118790756|tpd|FAA00256.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215704573|dbj|BAG94206.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767879|dbj|BAH00108.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623845|gb|EEE57977.1| hypothetical protein OsJ_08721 [Oryza sativa Japonica Group]
Length = 688
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 155/267 (58%), Positives = 197/267 (73%), Gaps = 14/267 (5%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD CL++LE +L RC Y+VTT +QAA+AL +LRE + FD+V+SDV
Sbjct: 18 DQFPVGMRVLAVDDDPVCLKVLETLLLRCQYHVTTTNQAAIALKMLRENRDMFDLVISDV 77
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI +G V++GI HGACDYL+KP+R EEL+NIWQ
Sbjct: 78 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRNIWQ 137
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRG-SDEIE-YASSVNEGTEGTFKAQRKRISAKEE 202
HV+R++++ ++ N EE + SD + + + + G +RK ++EE
Sbjct: 138 HVIRRKFS-TRDRANLDFYEECNKPPNADSDHVHGHVTCGSPDQSGRPSKKRKEYCSEEE 196
Query: 203 DDGELES---DDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 259
D+GE+ + DDPS KKPRVVWSVELH++FV+AVNQLGIDKAVPKRILELMNV LTRE
Sbjct: 197 DEGEVNTQDIDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRE 256
Query: 260 NVASHLQEINLQKFRLYLKRLNGVSQQ 286
NVASH LQK+RLYLKRL+ V+ Q
Sbjct: 257 NVASH-----LQKYRLYLKRLSAVASQ 278
>gi|218191747|gb|EEC74174.1| hypothetical protein OsI_09283 [Oryza sativa Indica Group]
Length = 688
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 155/267 (58%), Positives = 197/267 (73%), Gaps = 14/267 (5%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD CL++LE +L RC Y+VTT +QAA+AL +LRE + FD+V+SDV
Sbjct: 18 DQFPVGMRVLAVDDDPVCLKVLETLLLRCQYHVTTTNQAAIALKMLRENRDMFDLVISDV 77
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI +G V++GI HGACDYL+KP+R EEL+NIWQ
Sbjct: 78 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRNIWQ 137
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRG-SDEIE-YASSVNEGTEGTFKAQRKRISAKEE 202
HV+R++++ ++ N EE + SD + + + + G +RK ++EE
Sbjct: 138 HVIRRKFS-TRDRANLDFYEECNKPPNADSDHVHGHVTCGSPDQSGRPSKKRKEYCSEEE 196
Query: 203 DDGELES---DDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 259
D+GE+ + DDPS KKPRVVWSVELH++FV+AVNQLGIDKAVPKRILELMNV LTRE
Sbjct: 197 DEGEVNTQDIDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRE 256
Query: 260 NVASHLQEINLQKFRLYLKRLNGVSQQ 286
NVASH LQK+RLYLKRL+ V+ Q
Sbjct: 257 NVASH-----LQKYRLYLKRLSAVASQ 278
>gi|326515596|dbj|BAK07044.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 159/281 (56%), Positives = 203/281 (72%), Gaps = 20/281 (7%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
AA DQFP G+RVL VDDD CL++LE +LRRC Y+VT +QA +AL +LRE + F
Sbjct: 11 AAAATCRDQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAIIALRMLRENRDMF 70
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREE 137
D+V+SDVHMPDMDGFKLLE +GLEMDLPVI +G VM+GI HGACDYL+KP+R E
Sbjct: 71 DLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIE 130
Query: 138 ELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGS-----DEIEYASSVNEGTEGTFKA 192
ELKNIWQHVVR++++ ++ N+ EE + D+++ SSV G K
Sbjct: 131 ELKNIWQHVVRRKFS-TRDSLNADMYEECNKPPSSDSDYLYDQVKCGSSVQSGRPN--KK 187
Query: 193 QRKRISAKEEDDGE---LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILE 249
+++ S +E++DG+ ++DDPS K+PRVVWSVELH++FV+AVN LGIDKAVPKRILE
Sbjct: 188 RKEYHSEEEDEDGDSSGQDNDDPSAPKRPRVVWSVELHRKFVTAVNHLGIDKAVPKRILE 247
Query: 250 LMNVPGLTRENVASHLQEINLQKFRLYLKRLNGV-SQQGGI 289
LMNV LTRENVASH LQK+R+YL+RL+ V SQQ GI
Sbjct: 248 LMNVEKLTRENVASH-----LQKYRVYLRRLSAVASQQAGI 283
>gi|242066838|ref|XP_002454708.1| hypothetical protein SORBIDRAFT_04g035980 [Sorghum bicolor]
gi|241934539|gb|EES07684.1| hypothetical protein SORBIDRAFT_04g035980 [Sorghum bicolor]
Length = 675
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/324 (54%), Positives = 215/324 (66%), Gaps = 31/324 (9%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
AA V DQFP G+RVL VDDD CL++LE +LRRC Y VTT +QA VAL +LR+ + F
Sbjct: 8 AAVGRVRDQFPVGMRVLAVDDDPVCLKVLENLLRRCQYRVTTTNQAVVALRMLRQNRDLF 67
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREE 137
D+V+SDVHMPDMDGFKLLE +GLEMDLPVI +G VM+GI HGACDYL+KP+R E
Sbjct: 68 DLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRLE 127
Query: 138 ELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGT---EGTFKAQR 194
EL+NIWQHVVR++++ N E N EE +D S + GT G +R
Sbjct: 128 ELRNIWQHVVRRKFS-NCERANIDGYEECT-RPSNADFDHVHSQITGGTPDQSGRSSKKR 185
Query: 195 KRISA-----KEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILE 249
K + EE +G+ E+DDPS KKPRVVWSVELH++FV+AVNQLGIDKAVPKRILE
Sbjct: 186 KEYHSEEEDEGEESNGQ-ENDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILE 244
Query: 250 LMNVPGLTRENVASHLQEINLQKFRLYLKRLNGV-SQQGGITNSFCAPIETNVKLGSLGR 308
LMNV LTRENVASH LQK+RLYLKRL+ V SQQ I +F N +G
Sbjct: 245 LMNVERLTRENVASH-----LQKYRLYLKRLSAVASQQASIVAAFGG----NDPFMRMGA 295
Query: 309 FD----IQALAASGQIP---PQTL 325
F+ Q+ A+S +P PQ L
Sbjct: 296 FEGLQGYQSFASSAALPSFTPQGL 319
>gi|168062796|ref|XP_001783363.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665113|gb|EDQ51808.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 268
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 166/277 (59%), Positives = 199/277 (71%), Gaps = 30/277 (10%)
Query: 27 PDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSD 86
PD+FP G+RVLVVDDD TCL +LE+ML C Y VTTC +A AL +LRE G FD+V+SD
Sbjct: 5 PDEFPVGMRVLVVDDDPTCLVLLERMLILCSYRVTTCGRATDALLLLREDIGKFDLVISD 64
Query: 87 VHMPDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIW 143
V MPDMDGFKLLE +GLEMDLPVI +G SAVM G+ HGACDYLIKP+ +EL+N+W
Sbjct: 65 VDMPDMDGFKLLELVGLEMDLPVIMMSGNGETSAVMEGVIHGACDYLIKPVGIKELRNVW 124
Query: 144 QHVVRKRWNENKEHENSGSLEET---DHHKR--GSDEIEYASSVNEGTEGTFKAQRKRIS 198
QHVVRK+ E K + S+EE + KR G+D+ +Y SS + T+G +K ++R
Sbjct: 125 QHVVRKKRQEVKA-VSMKSIEEAGGCERQKRAGGADDADYTSSATDTTDGNWKLSKRR-- 181
Query: 199 AKEEDDGELESDD---------PSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILE 249
GE + ++ PST KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILE
Sbjct: 182 -----KGEFKEENEDDNEENDDPSTMKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILE 236
Query: 250 LMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQ 286
LM V GLTRENVASH LQK+RLYLKRL+GV+ Q
Sbjct: 237 LMGVQGLTRENVASH-----LQKYRLYLKRLSGVTNQ 268
>gi|225456769|ref|XP_002274673.1| PREDICTED: two-component response regulator ARR11 [Vitis vinifera]
Length = 570
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/301 (54%), Positives = 205/301 (68%), Gaps = 27/301 (8%)
Query: 14 SGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL 73
SG+ S R + FPAGLRVLVVDDD T L+ILE+ML++C Y VTTC A AL++L
Sbjct: 3 SGFCSPRT------EAFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALNML 56
Query: 74 RERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYL 130
RERK FD+V+SDV+MPDMDGFKLLEH+GLEMDLPVI DG S VM+G++HGACDYL
Sbjct: 57 RERKDGFDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYL 116
Query: 131 IKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTF 190
+KP+R +ELKNIWQHV RK+ +E K+ E+ + E SDE + +N G G
Sbjct: 117 LKPVRMKELKNIWQHVFRKKIHEGKDVESYECMREIQMIMSRSDEFDDGHQLNGGELGAT 176
Query: 191 KAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILEL 250
+ +RK + + DD EL DPS++KK RVVWS++LHQ+FV AVNQ+G DK PK+IL+L
Sbjct: 177 R-KRKDMENRRHDDQELV--DPSSSKKARVVWSIDLHQKFVDAVNQIGFDKVGPKKILDL 233
Query: 251 MNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ----QGGITNSFCAPIETNVKLGSL 306
MNVP LTRENVASH LQK+RLYL RL ++ +G F P GSL
Sbjct: 234 MNVPWLTRENVASH-----LQKYRLYLSRLQKENELKTSEGMKQQDFTCPA------GSL 282
Query: 307 G 307
G
Sbjct: 283 G 283
>gi|218197710|gb|EEC80137.1| hypothetical protein OsI_21925 [Oryza sativa Indica Group]
Length = 696
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 164/305 (53%), Positives = 210/305 (68%), Gaps = 17/305 (5%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD CL++LE +LRRC Y+VT+ +QA AL +LRE + FD+V+SDV
Sbjct: 20 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDV 79
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI +G VM+GI HGACDYL+KP+R EEL+NIWQ
Sbjct: 80 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQ 139
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRG-SDEIEYASSVNEGTE-GTFKAQRKRISAKEE 202
HVVR+++ N+E N +E + + +D Y + + G +RK + +++
Sbjct: 140 HVVRRKFG-NRERNNLDFSKECNKPQSADTDHGPYQPTCGSSDQNGRSSRKRKELHGEDD 198
Query: 203 DDGEL----ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 258
D+G+ E+D+PS KKPRVVWSVELH++FV+AVNQLGIDKAVPKRILELMNV LTR
Sbjct: 199 DEGDDNDYQENDEPSAAKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTR 258
Query: 259 ENVASHLQEINLQKFRLYLKRLNGV-SQQGGITNSFCAPIETNVKLGSL-GRFDIQALAA 316
ENVASH LQK+RLYLKRL V SQQ I +F + + +G+ G Q A
Sbjct: 259 ENVASH-----LQKYRLYLKRLGAVASQQASIVAAFGGRDPSFLHIGAFEGLQSYQPFAP 313
Query: 317 SGQIP 321
S +P
Sbjct: 314 SAALP 318
>gi|115466774|ref|NP_001056986.1| Os06g0183100 [Oryza sativa Japonica Group]
gi|55771374|dbj|BAD72541.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113595026|dbj|BAF18900.1| Os06g0183100 [Oryza sativa Japonica Group]
gi|118790746|tpd|FAA00255.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215736874|dbj|BAG95803.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635081|gb|EEE65213.1| hypothetical protein OsJ_20357 [Oryza sativa Japonica Group]
Length = 696
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 164/305 (53%), Positives = 210/305 (68%), Gaps = 17/305 (5%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD CL++LE +LRRC Y+VT+ +QA AL +LRE + FD+V+SDV
Sbjct: 20 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLLRENRDMFDLVISDV 79
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI +G VM+GI HGACDYL+KP+R EEL+NIWQ
Sbjct: 80 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRNIWQ 139
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRG-SDEIEYASSVNEGTE-GTFKAQRKRISAKEE 202
HVVR+++ N+E N +E + + +D Y + + G +RK + +++
Sbjct: 140 HVVRRKFG-NRERNNLDFSKECNKPQSADTDHGPYQPTCGSSDQNGRSSRKRKELHGEDD 198
Query: 203 DDGEL----ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 258
D+G+ E+D+PS KKPRVVWSVELH++FV+AVNQLGIDKAVPKRILELMNV LTR
Sbjct: 199 DEGDDNDYQENDEPSAAKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTR 258
Query: 259 ENVASHLQEINLQKFRLYLKRLNGV-SQQGGITNSFCAPIETNVKLGSL-GRFDIQALAA 316
ENVASH LQK+RLYLKRL V SQQ I +F + + +G+ G Q A
Sbjct: 259 ENVASH-----LQKYRLYLKRLGAVASQQASIVAAFGGRDPSFLHIGAFEGLQSYQPFAP 313
Query: 317 SGQIP 321
S +P
Sbjct: 314 SAALP 318
>gi|413939317|gb|AFW73868.1| putative two-component response regulator family protein [Zea mays]
Length = 676
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 159/281 (56%), Positives = 200/281 (71%), Gaps = 18/281 (6%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
AA V DQFP G+RVL VDDD CL++LE +LRRC Y+VTT +QA VAL +LR+ + F
Sbjct: 8 AAVGRVRDQFPVGMRVLAVDDDPVCLKVLENLLRRCQYHVTTTNQAVVALSMLRQNRDLF 67
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREE 137
D+V+SDVHMPDMDGFKLLE +GLEMDLPVI +G VM+GI HGACDYL+KP+R E
Sbjct: 68 DLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRLE 127
Query: 138 ELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKR- 196
EL+NIWQHVVR++++ N + N+ EE + ++ ++ + + + +KR
Sbjct: 128 ELRNIWQHVVRRKFS-NCDRANNDGYEECNRPSNADFDLAHSQITAGPPDQSGRPSKKRK 186
Query: 197 ------ISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILEL 250
EE +G+ ++DDPS KKPRVVWSVELH++FV+AVNQLGIDKAVPKRILEL
Sbjct: 187 EYHSEEEDEGEESNGQ-DNDDPSAPKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILEL 245
Query: 251 MNVPGLTRENVASHLQEINLQKFRLYLKRLNGV-SQQGGIT 290
MNV LTRENVASH LQK+RLYLKRL+ V SQQ I
Sbjct: 246 MNVERLTRENVASH-----LQKYRLYLKRLSAVASQQASIV 281
>gi|218189558|gb|EEC71985.1| hypothetical protein OsI_04831 [Oryza sativa Indica Group]
Length = 582
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 153/254 (60%), Positives = 189/254 (74%), Gaps = 12/254 (4%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVLVVDDD T L+ILE+MLR+C Y VTTC A VALDILRERK FD+V+SDV+M
Sbjct: 6 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVISDVNM 65
Query: 90 PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
PDMDGFKLLEHIGLEMDLPVI DG S VM+G++HGACDYL+KP+R +EL+NIWQHV
Sbjct: 66 PDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 125
Query: 147 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 206
RK+ +E KE E + S ++ + + ++ S T + +RK + ++D +
Sbjct: 126 YRKKMHEVKEIEGNDSCDDLQILRNSFEGLDEKSLFMRSDSDTMR-KRKDV---DKDHAD 181
Query: 207 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
ES D +T KK RVVWSV+LHQ+FV+AVNQ+G DK PK+IL+LMNVPGLTRENVASH
Sbjct: 182 QESSDGNTVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRENVASH-- 239
Query: 267 EINLQKFRLYLKRL 280
LQK+RLYL RL
Sbjct: 240 ---LQKYRLYLSRL 250
>gi|356515054|ref|XP_003526216.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 696
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 181/400 (45%), Positives = 248/400 (62%), Gaps = 37/400 (9%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDDD TCL +LE +LRRC Y+ TT +QA AL +LRE K FD+V+SDV
Sbjct: 12 DEFPVGMRVLAVDDDPTCLLVLETLLRRCQYHATTTNQAIKALALLREHKDKFDLVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI +G VM+GI HGACDYL+KP+R EELKNIWQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSANGDTKLVMKGISHGACDYLLKPVRMEELKNIWQ 131
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HV+R++ ++KE + ++++ + + + + T K + + EE +
Sbjct: 132 HVIRRKKFDSKEKNKTRNIDKPTSNSSNGLGSSGTGNSDHNEKLTKKRKDQDEDEDEEQE 191
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
+ ++DDPS KKPRVVWSVELH++FV+AVNQLGIDKAVPK+IL+LMNV LTRENVASH
Sbjct: 192 NDHDNDDPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASH 251
Query: 265 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSL-GRFDIQALAASGQI-- 320
LQK+RLYLKR++ V+ QQ + + + +++ S+ G IQ+++ SGQ+
Sbjct: 252 -----LQKYRLYLKRISCVANQQTNMVVALGGADPSYLRMNSVSGVGHIQSISGSGQLHN 306
Query: 321 ------PP-------QTLAALHAELLGRPTGNLVTAVDQPALLQATLQGPK----CIPAD 363
PP T A L+ G P+G V + Q L+ T K +PA+
Sbjct: 307 NAFRSFPPSGIINRLNTPAGLNVH--GFPSG--VLQLSQSQNLKNTNDNLKFQSAIVPAN 362
Query: 364 ----HGVAFGQQLVKCQSNVPENLPQSIISVDDASTGFGV 399
HG+ L + Q+N Q++ +V DA T F +
Sbjct: 363 QNGVHGMTVSVGLDQLQNNKGVMSVQNLTTVFDAKTTFPI 402
>gi|118790785|tpd|FAA00259.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|222619710|gb|EEE55842.1| hypothetical protein OsJ_04457 [Oryza sativa Japonica Group]
Length = 582
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 153/254 (60%), Positives = 189/254 (74%), Gaps = 12/254 (4%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVLVVDDD T L+ILE+MLR+C Y VTTC A VALDILRERK FD+V+SDV+M
Sbjct: 6 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVISDVNM 65
Query: 90 PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
PDMDGFKLLEHIGLEMDLPVI DG S VM+G++HGACDYL+KP+R +EL+NIWQHV
Sbjct: 66 PDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 125
Query: 147 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 206
RK+ +E KE E + S ++ + + ++ S T + +RK + ++D +
Sbjct: 126 YRKKMHEVKEIEGNDSCDDLQILRNSFEGLDEKSLFMRSDSDTMR-KRKDV---DKDHAD 181
Query: 207 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
ES D +T KK RVVWSV+LHQ+FV+AVNQ+G DK PK+IL+LMNVPGLTRENVASH
Sbjct: 182 QESSDGNTVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRENVASH-- 239
Query: 267 EINLQKFRLYLKRL 280
LQK+RLYL RL
Sbjct: 240 ---LQKYRLYLSRL 250
>gi|168002194|ref|XP_001753799.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695206|gb|EDQ81551.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 311
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 158/259 (61%), Positives = 190/259 (73%), Gaps = 12/259 (4%)
Query: 22 ADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFD 81
A + PD FPAGLRVLVVDD+ L +LE+ML C Y VTTC +A AL +LRE FD
Sbjct: 38 AKLDTPDAFPAGLRVLVVDDEPVTLMVLEKMLTNCSYRVTTCGRATDALCLLREDIDKFD 97
Query: 82 VVLSDVHMPDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEE 138
+V+SDV+MPDMDGFKLLE +GLEMDLPVI +G SAVM+GI HGACDYL+KP+R++E
Sbjct: 98 LVISDVNMPDMDGFKLLELVGLEMDLPVIMMSGNGETSAVMKGITHGACDYLLKPVRQKE 157
Query: 139 LKNIWQHVVRKRWNENKEHENSGSLEE----TDHHKRGSDEIEYASSVNEGT-EGTFKAQ 193
L+NIWQHVVRKR + K + S+EE + G D+++Y SS T +G ++ +
Sbjct: 158 LRNIWQHVVRKRRQDVKIARETKSVEEGGVCVREKRTGPDDVDYTSSATGDTGDGNWRKK 217
Query: 194 RK----RISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILE 249
RK + E+D E E+DDPST KKPRVVWSVELHQQFVSAVNQLGID+AVPKRILE
Sbjct: 218 RKGENQTFKDETEEDVEQENDDPSTMKKPRVVWSVELHQQFVSAVNQLGIDRAVPKRILE 277
Query: 250 LMNVPGLTRENVASHLQEI 268
LM V GLTRENVASHLQ I
Sbjct: 278 LMGVHGLTRENVASHLQVI 296
>gi|168004846|ref|XP_001755122.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693715|gb|EDQ80066.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 338
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 165/266 (62%), Positives = 198/266 (74%), Gaps = 13/266 (4%)
Query: 14 SGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL 73
+ +G+ + A + PD+FP G+RVLVVDD+ TCL ILEQML RC Y VTTC +A AL +L
Sbjct: 35 TAWGA-KPAKLDTPDEFPVGMRVLVVDDNPTCLMILEQMLVRCAYRVTTCGKATEALSML 93
Query: 74 RERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYL 130
RE G FDVV+SDV MPDMDGFKLLE +GLEMDLPVI +G SAVM+GI HGACDYL
Sbjct: 94 REDIGKFDVVISDVDMPDMDGFKLLELVGLEMDLPVIMVSGNGETSAVMKGITHGACDYL 153
Query: 131 IKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR-----GSDEIEYASSVNEG 185
+KP+R EEL+NIWQHVVRK+ E K + S+EE +R G+D+ +Y SS +
Sbjct: 154 LKPVRIEELRNIWQHVVRKKRREVKA-VATKSVEEAGGCERPKRGGGADDADYTSSATDT 212
Query: 186 TEGTFKAQRKR---ISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKA 242
T+ +K ++R + E+D E E+DDPST K+PRVVWSVELHQQFVSAVNQLGIDKA
Sbjct: 213 TDSNWKLTKRRKGEFKDENEEDNEQENDDPSTLKRPRVVWSVELHQQFVSAVNQLGIDKA 272
Query: 243 VPKRILELMNVPGLTRENVASHLQEI 268
VPKRILELM V GLTRENVASHLQ I
Sbjct: 273 VPKRILELMGVQGLTRENVASHLQVI 298
>gi|359484783|ref|XP_002270833.2| PREDICTED: two-component response regulator ARR12-like [Vitis
vinifera]
Length = 712
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 172/344 (50%), Positives = 227/344 (65%), Gaps = 18/344 (5%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
A + V D FP G+RVL VDDD TCL +L+ +LRRC Y VTT +QA AL +LRE K F
Sbjct: 11 AGEDGVKDPFPVGMRVLAVDDDPTCLMLLDGLLRRCQYQVTTTNQAITALKMLRENKNNF 70
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREE 137
D+V+SDV MPDMDGFKLLE +GLEMDLPVI + VMRGI HGACDYL+KP+R E
Sbjct: 71 DLVISDVSMPDMDGFKLLELVGLEMDLPVIMLSSHSDPKLVMRGITHGACDYLLKPVRIE 130
Query: 138 ELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRK-- 195
ELKNIWQHV+R++ ++K+ +N + ++ H G SS N G +RK
Sbjct: 131 ELKNIWQHVIRRKKIDSKD-QNKSADQDNALHADGEGGEGPPSSSNADQNGKLNRKRKDQ 189
Query: 196 -RISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVP 254
+E ++ E++DPS+ KKPRVVWSVELH++FV+AVNQLGI+KAVPKRIL+LMNV
Sbjct: 190 NEDEEEEGEENGEENEDPSSQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKRILDLMNVE 249
Query: 255 GLTRENVASHLQEINLQKFRLYLKRLNGV-SQQGGITNSFCAPIETNVKLGSLGRF-DIQ 312
GLTRENVASH LQK+RLYLKR++ V +QQ + +F A + +++GSL F D +
Sbjct: 250 GLTRENVASH-----LQKYRLYLKRISCVATQQANMVAAFGAKDSSYMRMGSLDGFGDFR 304
Query: 313 ALAASGQIPPQTLAALHAE-LLGR---PTGNLVTAVDQPALLQA 352
LA G++ +++ +LGR P G + + L+Q
Sbjct: 305 GLAGPGRLNSTAMSSYPPSGMLGRLNSPAGLSLRGLTSSGLIQT 348
>gi|242092234|ref|XP_002436607.1| hypothetical protein SORBIDRAFT_10g005580 [Sorghum bicolor]
gi|241914830|gb|EER87974.1| hypothetical protein SORBIDRAFT_10g005580 [Sorghum bicolor]
Length = 659
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 161/279 (57%), Positives = 201/279 (72%), Gaps = 22/279 (7%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD CL++LE +LRRC Y+VTT +QA AL +LRE + +D+V+SDV
Sbjct: 14 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTTTNQAITALKMLRENRDTYDLVISDV 73
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI +G +VM+GI HGACDYL+KP+R EEL+NIWQ
Sbjct: 74 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKSVMKGITHGACDYLLKPVRIEELRNIWQ 133
Query: 145 HVVRKRWNENKE-----HENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISA 199
HVVR+++++ + +++ L D G ++I +S G +RK + +
Sbjct: 134 HVVRRKFSKRERSNLDIYKDFNKLPSAD-PCHGHNQITAGAS---DQSGRISKKRKEMHS 189
Query: 200 KEEDDGEL----ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 255
EEDDGE E D+PS KKPRVVWSVELH++FV+AVNQLGIDKAVPKRILELMNV
Sbjct: 190 DEEDDGEENDFQEGDEPSAAKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEK 249
Query: 256 LTRENVASHLQEINLQKFRLYLKRLNGV-SQQGGITNSF 293
LTRENVASH LQK+RLYLKRL+ V SQQ I +F
Sbjct: 250 LTRENVASH-----LQKYRLYLKRLSAVASQQASIVAAF 283
>gi|357463135|ref|XP_003601849.1| Response regulator [Medicago truncatula]
gi|355490897|gb|AES72100.1| Response regulator [Medicago truncatula]
Length = 570
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 172/347 (49%), Positives = 219/347 (63%), Gaps = 43/347 (12%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FPAGLRVLVVDDD T L+ILE+ML++C Y VTTC A AL +LRERK +D+V+SDV+M
Sbjct: 13 FPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNM 72
Query: 90 PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
PDMDGFKLLEH+GLEMDLPVI DG S VM+G++HGACDYL+KPIR +EL+NIWQHV
Sbjct: 73 PDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 147 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 206
RKR +E +E EN S E H R E+ ++ + T +RK + ++ +D
Sbjct: 133 FRKRIHEVREFENFESFESM-HLMRNGSEMSEEGNLFALEDMTSTKKRKDVDSRHDDKEF 191
Query: 207 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
L+S S++KK RVVWSV+LHQ+FV AVNQ+G DK PK+IL+LMNVP L+RENVASH
Sbjct: 192 LDS---SSSKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLSRENVASH-- 246
Query: 267 EINLQKFRLYLKRLNGVSQQ----GGITNS---------FCAP------------IETNV 301
LQK+RLYL RL ++Q G+ +S F P + N
Sbjct: 247 ---LQKYRLYLSRLQKDNEQKSSSSGMKHSDLPSKDVGNFGFPNSANKQQNDASIDKYNY 303
Query: 302 KLGSLGRFDIQALAASGQ---IPPQTLAALHAELLGRPTGNLVTAVD 345
GSL +I+ + G I P + AA A L TGN+ A D
Sbjct: 304 SEGSLQHQNIETKSHEGNPKGIVPHSTAAEKARAL---TGNITDATD 347
>gi|357126386|ref|XP_003564868.1| PREDICTED: uncharacterized protein LOC100824670 [Brachypodium
distachyon]
Length = 577
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 158/266 (59%), Positives = 192/266 (72%), Gaps = 21/266 (7%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
AAD V FP GLRVLVVDDD T L+ILE+MLR+C Y VTTC A VAL+ILRERK F
Sbjct: 2 AADATV---FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALEILRERKSKF 58
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREE 137
D+V+SDV+MPDMDGFKLLEHIGLEMDLPVI DG S VM+G++HGACDYL+KP+R +
Sbjct: 59 DIVISDVNMPDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMK 118
Query: 138 ELKNIWQHVVRKRWNENKE---HENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQR 194
EL+NIWQHV RKR +E KE H++ L+ + G DE + + T R
Sbjct: 119 ELRNIWQHVYRKRMHEVKEIEGHDSCDDLQILRYGFEGFDEKGIFITADSDT------TR 172
Query: 195 KRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVP 254
KR ++D + +S D +T KK RVVWSV+LHQ+FV+AVNQ+G DK PK+IL+LMNVP
Sbjct: 173 KRKDL-DKDHADQDSSDGATAKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVP 231
Query: 255 GLTRENVASHLQEINLQKFRLYLKRL 280
G+TRENVASH LQK+RLYL RL
Sbjct: 232 GITRENVASH-----LQKYRLYLGRL 252
>gi|357137423|ref|XP_003570300.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 671
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 154/277 (55%), Positives = 193/277 (69%), Gaps = 18/277 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD CL++LE +LRRC Y+VT +QA +AL +LRE + FD+V+SDV
Sbjct: 15 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAVIALRMLRENRDMFDLVISDV 74
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI +G VM+GI HGACDYL+KP+R EEL+NIWQ
Sbjct: 75 HMPDMDGFKLLELVGLEMDLPVIMLSGNGETKTVMKGITHGACDYLLKPVRIEELRNIWQ 134
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKR-------I 197
HVVR++++ ++ N + EE + Y+ + + +KR
Sbjct: 135 HVVRRKFS-TPDYVNLDTYEECNKPPNADSGYVYSQVTCGSPDQNGRPNKKRKDYHSEEE 193
Query: 198 SAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLT 257
EE +G+ + DDPS K+PRVVWSVELH++FV+AVN LGIDKAVPKRILELMNV LT
Sbjct: 194 GEDEESNGQ-DDDDPSAPKRPRVVWSVELHRKFVAAVNHLGIDKAVPKRILELMNVEKLT 252
Query: 258 RENVASHLQEINLQKFRLYLKRLNGV-SQQGGITNSF 293
RENVASH LQK+RLYL+RL+ V SQQ GI S
Sbjct: 253 RENVASH-----LQKYRLYLRRLSAVASQQAGIVASL 284
>gi|413952914|gb|AFW85563.1| putative two-component response regulator family protein [Zea mays]
Length = 669
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 153/279 (54%), Positives = 195/279 (69%), Gaps = 18/279 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD CL++LE +LRRC Y+V T +QA AL +LRE + FD+V+SDV
Sbjct: 22 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVITTNQAITALKLLRENRDMFDLVISDV 81
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI +G +VM+GI HGACDYL+KP+R EEL+NIWQ
Sbjct: 82 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKSVMKGITHGACDYLLKPVRIEELRNIWQ 141
Query: 145 HVVRKRWNENKE-----HENSGSLEETD---HHKRGSDEIEYASSVNEGTEGTFKAQRKR 196
HVVR+++++ + +++ L D H G + +S G G + +
Sbjct: 142 HVVRRKFSKRERSNLDVYKDFNRLPGADPCHSHGHGHGQTTAGASDQSGRIGRKRKEMHS 201
Query: 197 ISAKEEDDGEL-ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 255
+ ++ + E D+PS KKPRVVWS+ELH++FV+AVNQLGIDKAVPKRILELMNV
Sbjct: 202 DEEDDGEENDFQEGDEPSAAKKPRVVWSIELHRKFVAAVNQLGIDKAVPKRILELMNVEK 261
Query: 256 LTRENVASHLQEINLQKFRLYLKRLNGV-SQQGGITNSF 293
LTRENVASH LQK+RLYLKRL+ V SQQ I +F
Sbjct: 262 LTRENVASH-----LQKYRLYLKRLSAVASQQASIVAAF 295
>gi|357466055|ref|XP_003603312.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355492360|gb|AES73563.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 645
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 154/291 (52%), Positives = 202/291 (69%), Gaps = 9/291 (3%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDDD TCL +LE +LRRC Y+VTT SQA AL +LRE K FD+V+SDV
Sbjct: 6 DRFPIGMRVLAVDDDPTCLLVLETLLRRCQYHVTTTSQAITALTMLRENKDKFDLVISDV 65
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI G VM+GI HGACDYL+KP+R EELKNIWQ
Sbjct: 66 HMPDMDGFKLLELVGLEMDLPVIMLSAYGDTKLVMKGISHGACDYLLKPVRLEELKNIWQ 125
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HV+RK+ ++ KE + ++T A + +E + T K + + E+ +
Sbjct: 126 HVIRKKKSDPKEKNKTSKPDKTTSDSGSGLRSAGAENSDENGKLTKKRKDQDEDEDEDKE 185
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
+++DPS KKPRVVWSVELH++FV+AVNQLGIDKAVPK+IL++MNV +TRENVASH
Sbjct: 186 NGNDNEDPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDMMNVENITRENVASH 245
Query: 265 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRFDIQAL 314
LQK+RLYLKR++ V+ QQ + + + ++ +++G G F A
Sbjct: 246 -----LQKYRLYLKRISCVANQQASMVAALGSADQSYLRMGGSGHFHNNAF 291
>gi|356569201|ref|XP_003552793.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 557
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 152/260 (58%), Positives = 188/260 (72%), Gaps = 15/260 (5%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FPAGLRVLVVDDD T L+ILE+ML++C Y VTTC A AL +LRERK +D+V+SDV+M
Sbjct: 13 FPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNM 72
Query: 90 PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
PDMDGFKLLEH+GLEMDLPVI DG S VM+G++HGACDYL+KPIR +EL+NIWQHV
Sbjct: 73 PDMDGFKLLEHVGLEMDLPVIMMSVDGETSKVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 147 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 206
RK+ +E KE E+ S+ H R E+ ++ + T +RK +K +D
Sbjct: 133 FRKKIHEAKEFESFESI----HLMRNGSELSDDGNLFAVEDVTSSKKRKDADSKHDDK-- 186
Query: 207 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
E DPS+TKK RVVWSV+LHQ+FV AVNQ+G DK PK+IL+LMNVP LTRENVASH
Sbjct: 187 -ECLDPSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASH-- 243
Query: 267 EINLQKFRLYLKRLNGVSQQ 286
LQK+RLYL R+ + Q
Sbjct: 244 ---LQKYRLYLSRIQKENDQ 260
>gi|115444635|ref|NP_001046097.1| Os02g0182100 [Oryza sativa Japonica Group]
gi|49388028|dbj|BAD25144.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113535628|dbj|BAF08011.1| Os02g0182100 [Oryza sativa Japonica Group]
gi|118790764|tpd|FAA00257.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215713506|dbj|BAG94643.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622313|gb|EEE56445.1| hypothetical protein OsJ_05635 [Oryza sativa Japonica Group]
Length = 626
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 156/296 (52%), Positives = 204/296 (68%), Gaps = 29/296 (9%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL+ILE +L RC Y+VTT QAA AL +LRE K FD+V+SDV
Sbjct: 23 DQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLRENKDQFDLVISDV 82
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI +G VM+GI HGACDYL+KP+R E+L+ IWQ
Sbjct: 83 HMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQ 142
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTE-GTFKAQRKRISAKEE- 202
HV+R++ N + +N G+ ++ +G + NEG G + +R+ +++E
Sbjct: 143 HVIRRK---NCDAKNRGNDDDAGQKAQGMN--------NEGESIGANRNKRQSRKSRDEN 191
Query: 203 -DDGE------LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 255
DDG+ E+ D ST KKPRVVWSVELH++FV+AVNQLGI+KAVPK+IL+LMNV
Sbjct: 192 GDDGDDSDENSNENGDSSTQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKKILDLMNVEN 251
Query: 256 LTRENVASHLQEINLQKFRLYLKRLN-GVSQQGGITNSFCAPIETNVKLGSLGRFD 310
+TRENVASH LQK+RLYLKRL+ S+Q + +F + + S G ++
Sbjct: 252 ITRENVASH-----LQKYRLYLKRLSTDASRQANLAAAFGGRNPAYINMNSFGNYN 302
>gi|298103722|emb|CBM42562.1| putative B-type response regulator 19 [Populus x canadensis]
Length = 685
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 170/336 (50%), Positives = 223/336 (66%), Gaps = 24/336 (7%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP G+RVL VDDD CL++LE +LR+C Y VTT +QA AL++LRE + +D+V+SDV+M
Sbjct: 17 FPVGMRVLAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEMLRENRNKYDLVISDVNM 76
Query: 90 PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
PDMDGFKLLE +GLEMDLPVI + G V +GI HGA DYL+KP+R EELKNIWQHV
Sbjct: 77 PDMDGFKLLELVGLEMDLPVIMLSSHGDKEFVYKGITHGAVDYLLKPVRLEELKNIWQHV 136
Query: 147 V-RKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKR----ISAKE 201
+ RK+W + +GS + D G+ E E +S G + K RKR +
Sbjct: 137 IRRKKW---YPQDQNGSPNQ-DKGGDGAGEGEQVTSTGSGDQNG-KVNRKRKDQDEEEEG 191
Query: 202 EDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENV 261
E + ++++ KKPRVVWSVELHQ+FVSAVNQLG+DKAVPK+IL+LMNV GLTRENV
Sbjct: 192 EGEDGNDNEESGNQKKPRVVWSVELHQKFVSAVNQLGLDKAVPKKILDLMNVDGLTRENV 251
Query: 262 ASHLQEINLQKFRLYLKRLN-GVSQQGGITNSFCAPIETNVKLGSLGRF-DIQALAASGQ 319
ASH LQKFRLYLKRL+ G +QQ + +F A + +++GSL F D +++ GQ
Sbjct: 252 ASH-----LQKFRLYLKRLSCGANQQPNMVAAFGAKDSSYLRMGSLDGFGDFRSVHGPGQ 306
Query: 320 IPPQTLAAL-HAELLGR---PTGNLVTAVDQPALLQ 351
+ +L++ LLGR P G + + P LLQ
Sbjct: 307 LSTTSLSSYPPGSLLGRLNSPGGLTLQGIASPGLLQ 342
>gi|125538347|gb|EAY84742.1| hypothetical protein OsI_06112 [Oryza sativa Indica Group]
Length = 626
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 156/296 (52%), Positives = 204/296 (68%), Gaps = 29/296 (9%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL+ILE +L RC Y+VTT QAA AL +LRE K FD+V+SDV
Sbjct: 23 DQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLLRENKDQFDLVISDV 82
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI +G VM+GI HGACDYL+KP+R E+L+ IWQ
Sbjct: 83 HMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQ 142
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTE-GTFKAQRKRISAKEE- 202
HV+R++ N + +N G+ ++ +G + NEG G + +R+ +++E
Sbjct: 143 HVIRRK---NCDAKNRGNDDDAGQKAQGMN--------NEGESIGANRNKRQSRKSRDEN 191
Query: 203 -DDGE------LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 255
DDG+ E+ D ST KKPRVVWSVELH++FV+AVNQLGI+KAVPK+IL+LMNV
Sbjct: 192 GDDGDDSDENSNENGDSSTQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKKILDLMNVEN 251
Query: 256 LTRENVASHLQEINLQKFRLYLKRLN-GVSQQGGITNSFCAPIETNVKLGSLGRFD 310
+TRENVASH LQK+RLYLKRL+ S+Q + +F + + S G ++
Sbjct: 252 ITRENVASH-----LQKYRLYLKRLSTDASRQANLAAAFGGRNPAYINMNSFGNYN 302
>gi|224143990|ref|XP_002325148.1| type-b response regulator [Populus trichocarpa]
gi|222866582|gb|EEF03713.1| type-b response regulator [Populus trichocarpa]
Length = 707
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 169/336 (50%), Positives = 223/336 (66%), Gaps = 24/336 (7%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP G+RVL VDDD CL++LE +LR+C Y VTT +QA AL++LRE + +D+V+SDV+M
Sbjct: 17 FPVGMRVLAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEMLRENRNKYDLVISDVNM 76
Query: 90 PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
PDMDGFKLLE +GLEMDLPVI + G V +GI HGA DYL+KP+R EELKNIWQHV
Sbjct: 77 PDMDGFKLLELVGLEMDLPVIMLSSHGDKEFVFKGITHGAVDYLLKPVRLEELKNIWQHV 136
Query: 147 V-RKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKR----ISAKE 201
+ RK+W + +GS ++ D G+ E E +S + K RKR +
Sbjct: 137 IRRKKW---YPQDQNGSPDQ-DKGGDGAGEGEQVTSTGSADQNG-KVNRKRKDQDEEEEG 191
Query: 202 EDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENV 261
E + ++++ KKPRVVWSVELHQ+FVSAVNQLG+DKAVPK+IL+LMNV GLTRENV
Sbjct: 192 EGEDGNDNEESGNQKKPRVVWSVELHQKFVSAVNQLGLDKAVPKKILDLMNVDGLTRENV 251
Query: 262 ASHLQEINLQKFRLYLKRLN-GVSQQGGITNSFCAPIETNVKLGSLGRF-DIQALAASGQ 319
ASH LQKFRLYLKRL+ G +QQ + +F A + +++GSL F D +++ GQ
Sbjct: 252 ASH-----LQKFRLYLKRLSCGANQQPNMVAAFGAKDSSYLRMGSLDGFGDFRSVHGPGQ 306
Query: 320 IPPQTLAAL-HAELLGR---PTGNLVTAVDQPALLQ 351
+ +L++ LLGR P G + + P LLQ
Sbjct: 307 LSTTSLSSYPPGSLLGRLNSPGGLTLQGIASPGLLQ 342
>gi|388504468|gb|AFK40300.1| unknown [Medicago truncatula]
Length = 570
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 171/347 (49%), Positives = 218/347 (62%), Gaps = 43/347 (12%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FPAGLRVLVVDDD T L+ILE+ML++C Y VTTC A AL +LRERK +D+V+SDV+M
Sbjct: 13 FPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNM 72
Query: 90 PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
PDMDGFKLL H+GLEMDLPVI DG S VM+G++HGACDYL+KPIR +EL+NIWQHV
Sbjct: 73 PDMDGFKLLGHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 147 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 206
RKR +E +E EN S E H R E+ ++ + T +RK + ++ +D
Sbjct: 133 FRKRIHEAREFENFESFESM-HLMRNGSEMSEEGNLFALEDMTSTKKRKDVDSRHDDKEF 191
Query: 207 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
L+S S++KK RVVWSV+LHQ+FV AVNQ+G DK PK+IL+LMNVP L+RENVASH
Sbjct: 192 LDS---SSSKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLSRENVASH-- 246
Query: 267 EINLQKFRLYLKRLNGVSQQ----GGITNS---------FCAP------------IETNV 301
LQK+RLYL RL ++Q G+ +S F P + N
Sbjct: 247 ---LQKYRLYLSRLQKDNEQKSSSSGMKHSDLPSKDVGNFGFPNSANKQQNDASIDKYNY 303
Query: 302 KLGSLGRFDIQALAASGQ---IPPQTLAALHAELLGRPTGNLVTAVD 345
GSL +I+ + G I P + AA A L TGN+ A D
Sbjct: 304 SEGSLQHQNIETKSHEGNPKGIVPHSTAAEKARAL---TGNITDATD 347
>gi|56784051|dbj|BAD82798.1| putative response regulator 11 [Oryza sativa Japonica Group]
Length = 586
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/258 (58%), Positives = 188/258 (72%), Gaps = 16/258 (6%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVLVVDDD T L+ILE+MLR+C Y VTTC A VALDILRERK FD+V+SDV+M
Sbjct: 6 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDILRERKNKFDIVISDVNM 65
Query: 90 PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
PDMDGFKLLEHIGLEMDLPVI DG S VM+G++HGACDYL+KP+R +EL+NIWQHV
Sbjct: 66 PDMDGFKLLEHIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 125
Query: 147 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 206
RK+ +E KE E + S ++ + + ++ S T + +RK + ++D +
Sbjct: 126 YRKKMHEVKEIEGNDSCDDLQILRNSFEGLDEKSLFMRSDSDTMR-KRKDV---DKDHAD 181
Query: 207 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAV----PKRILELMNVPGLTRENVA 262
ES D +T KK RVVWSV+LHQ+FV+AVNQ+G D PK+IL+LMNVPGLTRENVA
Sbjct: 182 QESSDGNTVKKARVVWSVDLHQKFVNAVNQIGFDSECSPKGPKKILDLMNVPGLTRENVA 241
Query: 263 SHLQEINLQKFRLYLKRL 280
SH LQK+RLYL RL
Sbjct: 242 SH-----LQKYRLYLSRL 254
>gi|356507378|ref|XP_003522444.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 656
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 153/298 (51%), Positives = 211/298 (70%), Gaps = 10/298 (3%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDDD TCL +L+ +L+RC Y+VTT +QA AL +LRE K FD+V+SDV
Sbjct: 12 DEFPVGMRVLAVDDDPTCLLVLKTLLQRCQYHVTTTNQAIKALALLREHKDKFDLVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI +G VM+GI HGACDYL+KP+R EELKNIWQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSANGDTKMVMKGISHGACDYLLKPVRMEELKNIWQ 131
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HV+R++ ++KE + +L++ + + ++ + T K + + E+ +
Sbjct: 132 HVIRRKKFDSKEKNKTSNLDKPTSNSGNGLGSSGTGNSDQNEKLTKKRKDQDEDEDEDQE 191
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
+L+++DPS KKPRVVWSV+LH++FV+AVNQLGIDKAVPK+IL+LMNV LTRENVASH
Sbjct: 192 NDLDNEDPSAQKKPRVVWSVDLHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASH 251
Query: 265 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSL-GRFDIQALAASGQI 320
LQK+RLYLKR++ V+ QQ + + + +++ S+ G +Q L+ SGQ+
Sbjct: 252 -----LQKYRLYLKRISCVANQQANMVAALGVADPSYLRMSSVSGVGHVQTLSGSGQL 304
>gi|297735895|emb|CBI18671.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 171/356 (48%), Positives = 215/356 (60%), Gaps = 61/356 (17%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
A + V D FP G+RVL VDDD TCL +L+ +LRRC Y VTT +QA AL +LRE K F
Sbjct: 11 AGEDGVKDPFPVGMRVLAVDDDPTCLMLLDGLLRRCQYQVTTTNQAITALKMLRENKNNF 70
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREE 137
D+V+SDV MPDMDGFKLLE +GLEMDLPVI + VMRGI HGACDYL+KP+R E
Sbjct: 71 DLVISDVSMPDMDGFKLLELVGLEMDLPVIMLSSHSDPKLVMRGITHGACDYLLKPVRIE 130
Query: 138 ELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRI 197
ELKNIWQHV+R++ ++K+ S + H
Sbjct: 131 ELKNIWQHVIRRKKIDSKDQNKSADQDNALHA---------------------------- 162
Query: 198 SAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLT 257
DGE E++DPS+ KKPRVVWSVELH++FV+AVNQLGI+KAVPKRIL+LMNV GLT
Sbjct: 163 ------DGE-ENEDPSSQKKPRVVWSVELHRKFVAAVNQLGIEKAVPKRILDLMNVEGLT 215
Query: 258 RENVASHLQEINLQKFRLYLKRLNGV-SQQGGITNSFCAPIETNVKLGSLGRF-----DI 311
RENVASH LQK+RLYLKR++ V +QQ + +F A + +++GSL F
Sbjct: 216 RENVASH-----LQKYRLYLKRISCVATQQANMVAAFGAKDSSYMRMGSLDGFGHAQNSS 270
Query: 312 QALAASGQIPPQTLAALHAELL--GRPTGNLVTAVDQPALLQATLQGPKCIPADHG 365
++ G++ P L + L G PT +DQ LQ KCI G
Sbjct: 271 NSVNTHGKLQPVVLPTNQSASLFQGIPTS---LELDQ-------LQQRKCISTQRG 316
>gi|224110806|ref|XP_002315642.1| type-b response regulator [Populus trichocarpa]
gi|222864682|gb|EEF01813.1| type-b response regulator [Populus trichocarpa]
Length = 250
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 153/256 (59%), Positives = 188/256 (73%), Gaps = 12/256 (4%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D FPAGLRVLVVDDD T L+ILE+ML+RC Y VTTC A AL++LRERKG +D+V+SDV
Sbjct: 4 DSFPAGLRVLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDALNLLRERKGGYDIVISDV 63
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
+MPDMDGFKLLEH+GLEMDLPVI DG S VM+G++HGACDYL+KPIR +EL+NIWQ
Sbjct: 64 YMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 123
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HV RK+ +E ++ E +E + GSD E + G + T +RK I +K +
Sbjct: 124 HVFRKKIHEVRDIEILEGIESFQMTRNGSDLYEDGHFLC-GEDLTLIKKRKDIESKHD-- 180
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
E + D ++ KK RVVWSVELHQ+FV AVNQ+G DK PK+IL+LMNVP LTRENVASH
Sbjct: 181 -EKDIGDNTSAKKARVVWSVELHQKFVKAVNQIGFDKVGPKKILDLMNVPRLTRENVASH 239
Query: 265 LQEINLQKFRLYLKRL 280
LQK+RLYL RL
Sbjct: 240 -----LQKYRLYLSRL 250
>gi|109631194|gb|ABG35773.1| SRR391 [Striga asiatica]
Length = 541
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 147/285 (51%), Positives = 197/285 (69%), Gaps = 10/285 (3%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
+ FP G+RVL VDDD CL++L+ +LR+C Y+V+T SQA +AL +LRE K FD+V+SDV
Sbjct: 14 ENFPVGMRVLAVDDDPICLKLLDTLLRKCQYHVSTTSQARMALKMLRENKDRFDLVISDV 73
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLL+ +GLEMDLPVI + VM+G+ HGACDYL+KP+R EEL+NIWQ
Sbjct: 74 HMPDMDGFKLLDQVGLEMDLPVIMLSANSDPKLVMKGVTHGACDYLVKPVRIEELRNIWQ 133
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQ-RKRISAKEED 203
HV+R+R + + S + + G + E + K RKR ++E
Sbjct: 134 HVIRRRKSVTRNENKSADQAKPNQIASGEGGQLGGTIPGENADQNGKTNIRKRKDEEDES 193
Query: 204 DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 263
+ E++DP+T KKPRVVWS+ELH++FV+AVNQLGI+KAVPKRIL+LMNV GLTRENVAS
Sbjct: 194 EDGNENEDPATQKKPRVVWSIELHRKFVAAVNQLGIEKAVPKRILDLMNVEGLTRENVAS 253
Query: 264 HLQEINLQKFRLYLKRLNGV-SQQGGITNSFCAPIETNVKLGSLG 307
H LQK+RLYLKR++ V +QQ + +F +++G G
Sbjct: 254 H-----LQKYRLYLKRISTVATQQANMAAAFGVKDSPFMRMGPFG 293
>gi|414879149|tpg|DAA56280.1| TPA: putative two-component response regulator family protein [Zea
mays]
Length = 584
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 148/254 (58%), Positives = 187/254 (73%), Gaps = 12/254 (4%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVLVVDDD T L+ILE+MLR+C Y VTTC A+VA+ ILRER+ FD+V+SDV+M
Sbjct: 9 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVAIQILRERRNKFDIVISDVNM 68
Query: 90 PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
PDMDGFKLLE IGLEMDLPVI DG S VM+G++HGACDYL+KP+R +EL+NIWQHV
Sbjct: 69 PDMDGFKLLELIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 128
Query: 147 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 206
RK+ +E KE E + S ++ + G + + T + +RK ++ +D +
Sbjct: 129 YRKKMHEVKEIEGNDSYDDLQMFRNGVEGFDERDLFMRADSDTMR-KRKDVN---KDHAD 184
Query: 207 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
+S D +T KK RVVWSV+LHQ+FV+AVNQ+G DK PK+IL+LMNVPGLTRENVASH
Sbjct: 185 QDSSDGATVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRENVASH-- 242
Query: 267 EINLQKFRLYLKRL 280
LQK+RLYL RL
Sbjct: 243 ---LQKYRLYLSRL 253
>gi|255547918|ref|XP_002515016.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223546067|gb|EEF47570.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 584
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 164/307 (53%), Positives = 207/307 (67%), Gaps = 25/307 (8%)
Query: 14 SGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL 73
+G+ S R+ D FPAGLRVLVVDDD T L+ILE+ML++C Y VTTC A AL +L
Sbjct: 3 NGFSSPRS------DAFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALYLL 56
Query: 74 RERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYL 130
RERK +D+V+SDV+MPDMDGFKLLEH+GLEMDLPVI DG S VM+G++HGACDYL
Sbjct: 57 RERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYL 116
Query: 131 IKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTF 190
+KPIR +EL+NIWQHV RK+ +E ++ E +E + GSD + + G + T
Sbjct: 117 LKPIRMKELRNIWQHVFRKKIHEVRDIEILEGMESIQMARIGSDHSD-DGYLFCGEDLTS 175
Query: 191 KAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILE 249
+RK I K +D DGE STTKK RVVWSV+LHQ+FV AVNQ+G DK PK+IL+
Sbjct: 176 VKKRKDIENKHDDKDGE-----SSTTKKARVVWSVDLHQKFVKAVNQIGPDKVGPKKILD 230
Query: 250 LMNVPGLTRENVASHLQEINLQKFRLYLKRL----NGVSQQGGITNSFCAPIETNVKLGS 305
LMNVP LTRENVASH LQK+RLYL RL + + GGI S + E+ G+
Sbjct: 231 LMNVPWLTRENVASH-----LQKYRLYLSRLQKENDSKTSIGGIKQSESSLGESAGSFGT 285
Query: 306 LGRFDIQ 312
++Q
Sbjct: 286 QNSINMQ 292
>gi|226503033|ref|NP_001152300.1| two-component response regulator ARR11 [Zea mays]
gi|195654849|gb|ACG46892.1| two-component response regulator ARR11 [Zea mays]
Length = 584
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/254 (58%), Positives = 187/254 (73%), Gaps = 12/254 (4%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVLVVDDD T L+ILE+MLR+C Y VTTC A+VA+ ILRER+ FD+V+SDV+M
Sbjct: 9 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVAIQILRERRNKFDIVISDVNM 68
Query: 90 PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
PDMDGFKLLE IGLEMDLPVI DG S VM+G++HGACDYL+KP+R +EL+NIWQHV
Sbjct: 69 PDMDGFKLLELIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 128
Query: 147 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 206
RK+ +E KE E + S ++ + G + + T + +RK ++ +D +
Sbjct: 129 YRKKMHEVKEIEGNDSYDDLQMFRNGVEGFDERDLFMRADSDTMR-KRKDVN---KDHAD 184
Query: 207 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
+S D +T KK RVVWSV+LHQ+FV+AVNQ+G DK PK+IL+LMNVPGLTRENVASH
Sbjct: 185 QDSSDGATVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMNVPGLTRENVASH-- 242
Query: 267 EINLQKFRLYLKRL 280
LQK+RLYL RL
Sbjct: 243 ---LQKYRLYLSRL 253
>gi|356562101|ref|XP_003549312.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 667
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 160/303 (52%), Positives = 208/303 (68%), Gaps = 20/303 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL +LE +LRRC Y+VTT A AL++LRE K FD+V+SDV
Sbjct: 14 DQFPIGMRVLAVDDDSTCLMVLETLLRRCQYHVTTTKNAITALNLLRENKTMFDLVISDV 73
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI + VM+GI HGACDYL+KP+R EEL+NIWQ
Sbjct: 74 HMPDMDGFKLLELVGLEMDLPVIMLSVNDDPKMVMKGITHGACDYLLKPVRIEELQNIWQ 133
Query: 145 HVVRKRWNENKEHENSGSLEETDH---HKRGSDEIEYASSVNEGTEGTFKAQRK--RISA 199
HV+R++ ++KE + ++T+ + RGS A++ N G +RK
Sbjct: 134 HVIRRKKIDSKEQNKTSDYDKTNSDSGNGRGS-----AATGNSDQNGKPSKKRKDQDEDD 188
Query: 200 KEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 259
EE+D + +++DPST KKPRVVWSVELH++FVSAVN LGIDKAVPK+IL+LMN LTRE
Sbjct: 189 DEENDTDHDNEDPSTQKKPRVVWSVELHRKFVSAVNLLGIDKAVPKKILDLMNDEKLTRE 248
Query: 260 NVASHLQEINLQKFRLYLKRLN-GVSQQGGITNSFCAPIETNVKLGSL-GRFDIQALAAS 317
NVASH LQK+RLYLKR++ G ++Q + + + +++GSL G +Q L
Sbjct: 249 NVASH-----LQKYRLYLKRISCGANRQANMVAALGTADSSYLRMGSLSGVGHLQTLTGP 303
Query: 318 GQI 320
Q
Sbjct: 304 QQF 306
>gi|323388735|gb|ADX60172.1| ARR-B transcription factor [Zea mays]
Length = 631
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/319 (52%), Positives = 214/319 (67%), Gaps = 40/319 (12%)
Query: 8 VQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAA 67
+Q+ G+G+ DQFP G+RVL VDDD TCL+ILE +L RC Y+VTT QAA
Sbjct: 8 LQARASGGHGAK--------DQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAA 59
Query: 68 VALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRH 124
AL +LRE+K FD+V+SDVHMPDMDGFKLLE +GLEMDLPVI +G VM+GI H
Sbjct: 60 TALKLLREKKDQFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITH 119
Query: 125 GACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNE 184
GACDYL+KP+R E+L+ IWQHVVR+R + K NSG+ + D K+ ++ S+ E
Sbjct: 120 GACDYLLKPVRIEQLRTIWQHVVRRRSCDAK---NSGN-DNDDSGKK----LQVVSA--E 169
Query: 185 GTEGTFKAQRKRISAK----------EEDDGELESDDPSTTKKPRVVWSVELHQQFVSAV 234
G G + KRIS K + DD E+ D S+ KKPRVVWSVELH++FV+AV
Sbjct: 170 GDNGGVN-RNKRISRKGRDDNGDDGDDSDDNSNENGDSSSQKKPRVVWSVELHRKFVAAV 228
Query: 235 NQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNG-VSQQGGITNSF 293
NQLGIDKAVPK+IL+LMNV +TRENVASH LQK+RLYLKRL+ S+Q +T +F
Sbjct: 229 NQLGIDKAVPKKILDLMNVENITRENVASH-----LQKYRLYLKRLSADASRQANLTAAF 283
Query: 294 CA--PIETNVKLGSLGRFD 310
P N+ L + +++
Sbjct: 284 GGRNPAYVNMGLDAFRQYN 302
>gi|323388705|gb|ADX60157.1| ARR-B transcription factor [Zea mays]
Length = 631
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/319 (52%), Positives = 214/319 (67%), Gaps = 40/319 (12%)
Query: 8 VQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAA 67
+Q+ G+G+ DQFP G+RVL VDDD TCL+ILE +L RC Y+VTT QAA
Sbjct: 8 LQARASGGHGAK--------DQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAA 59
Query: 68 VALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRH 124
AL +LRE+K FD+V+SDVHMPDMDGFKLLE +GLEMDLPVI +G VM+GI H
Sbjct: 60 TALKLLREKKDQFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITH 119
Query: 125 GACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNE 184
GACDYL+KP+R E+L+ IWQHVVR+R + K NSG+ + D K+ ++ S+ E
Sbjct: 120 GACDYLLKPVRIEQLRTIWQHVVRRRSCDAK---NSGN-DNDDSGKK----LQVVSA--E 169
Query: 185 GTEGTFKAQRKRISAK----------EEDDGELESDDPSTTKKPRVVWSVELHQQFVSAV 234
G G + KRIS K + DD E+ D S+ KKPRVVWSVELH++FV+AV
Sbjct: 170 GDNGGVN-RNKRISRKGRDDNGDDGDDSDDNSNENGDSSSQKKPRVVWSVELHRKFVAAV 228
Query: 235 NQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNG-VSQQGGITNSF 293
NQLGIDKAVPK+IL+LMNV +TRENVASH LQK+RLYLKRL+ S+Q +T +F
Sbjct: 229 NQLGIDKAVPKKILDLMNVENITRENVASH-----LQKYRLYLKRLSADASRQANLTAAF 283
Query: 294 CA--PIETNVKLGSLGRFD 310
P N+ L + +++
Sbjct: 284 GGRNPAYVNMGLDAFRQYN 302
>gi|242059591|ref|XP_002458941.1| hypothetical protein SORBIDRAFT_03g043080 [Sorghum bicolor]
gi|241930916|gb|EES04061.1| hypothetical protein SORBIDRAFT_03g043080 [Sorghum bicolor]
Length = 579
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/254 (58%), Positives = 187/254 (73%), Gaps = 12/254 (4%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVLVVDDD T L+ILE+MLR+C Y VTTC A+VAL ILRER+ FD+V+SDV+M
Sbjct: 9 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVALQILRERRNKFDIVISDVNM 68
Query: 90 PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
PDMDGFKLLE IGLEMDLPVI DG S VM+G++HGACDYL+KP+R +EL+NIWQHV
Sbjct: 69 PDMDGFKLLELIGLEMDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHV 128
Query: 147 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 206
RK+ +E KE E + S ++ + G + + T + +RK + ++D +
Sbjct: 129 YRKKMHEVKEIEGNDSCDDLQIFRNGVEGFDERGLFMRADSDTMR-KRKDM---DKDHAD 184
Query: 207 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
+S D +T KK RVVWSV+LHQ+FV+AVNQ+G DK PK+IL+LM+VPGLTRENVASH
Sbjct: 185 QDSSDGATVKKARVVWSVDLHQKFVNAVNQIGFDKVGPKKILDLMSVPGLTRENVASH-- 242
Query: 267 EINLQKFRLYLKRL 280
LQK+RLYL RL
Sbjct: 243 ---LQKYRLYLSRL 253
>gi|356510875|ref|XP_003524159.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 584
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/264 (56%), Positives = 185/264 (70%), Gaps = 14/264 (5%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D FPAGLRVLVVDDD T LRILE+ML++CLY VTTC A AL LRERK +D+V+SDV
Sbjct: 12 DAFPAGLRVLVVDDDPTWLRILEKMLKKCLYEVTTCCLATEALKKLRERKDAYDIVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
+MPDMDGFKLLE +GLEMDLPVI DG S VM+G++HGACDYL+KPIR +EL+NIWQ
Sbjct: 72 NMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 131
Query: 145 HVVRKRWNENKEHENSGSLEETDHH--KRGSDEIEYASSVNEGTEGTFKAQRKRISAKEE 202
HV RKR +E ++ E+ + H + GSD + + E ++++ + +
Sbjct: 132 HVFRKRMHEARDFESHEGFDFEGIHLMRNGSDHSDDGNLF--AVEEITSIKKRKDADNKH 189
Query: 203 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 262
DD E D S KK RVVWSV+LHQ+FV AVNQ+G DK PK+IL+LMNVP LTRENVA
Sbjct: 190 DDKEF--GDHSPMKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVA 247
Query: 263 SHLQEINLQKFRLYLKRLNGVSQQ 286
SH LQK+RLYL RL + Q
Sbjct: 248 SH-----LQKYRLYLSRLQKENDQ 266
>gi|225425924|ref|XP_002267616.1| PREDICTED: two-component response regulator ARR11 [Vitis vinifera]
gi|297738324|emb|CBI27525.3| unnamed protein product [Vitis vinifera]
Length = 594
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 156/287 (54%), Positives = 200/287 (69%), Gaps = 20/287 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D FPAGLRVLVVDDD T L+ILE+ML++CLY VT C A AL++LRERK +D+V+SDV
Sbjct: 11 DVFPAGLRVLVVDDDPTWLKILEKMLKKCLYEVTICGLARDALNLLRERKDGYDIVISDV 70
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
+MPDMDGFKLLE +GLEMDLPVI DG S VM+G++HGACDYL+KPIR +EL+NIWQ
Sbjct: 71 NMPDMDGFKLLELVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 130
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HV RK+ NE ++ E+ S+++ + G ++ + V+ + T +RK K +D
Sbjct: 131 HVFRKKINEVRDIESHESIDDFQIMRNGPEQSDDGYLVS--GDPTSVKKRKDTENKHDDR 188
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
DPS+ KK RVVWSV+LHQ+FV AVNQ+G DK PK+IL+LMNVP LTRENVASH
Sbjct: 189 DHC---DPSSVKKARVVWSVDLHQKFVRAVNQIGFDKVGPKKILDLMNVPWLTRENVASH 245
Query: 265 LQEINLQKFRLYLKRLNG----VSQQGGITNSFCAPIETNVKLGSLG 307
LQK+RLYL RL + GGI +S +P ++ GS G
Sbjct: 246 -----LQKYRLYLSRLQKEDDLKTSCGGIKHSDLSPKDST---GSFG 284
>gi|356554201|ref|XP_003545437.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Glycine max]
Length = 681
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/303 (53%), Positives = 206/303 (67%), Gaps = 20/303 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL +LE +LRRC Y+VTT A AL +LRE K FD+V+SDV
Sbjct: 14 DQFPIGMRVLAVDDDSTCLMVLETLLRRCQYHVTTTKNAITALKLLRENKTMFDLVISDV 73
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI + VM+GI HGACDYL+KP+R EEL+NIWQ
Sbjct: 74 HMPDMDGFKLLELVGLEMDLPVIMLSVNDDPKMVMKGITHGACDYLLKPVRIEELQNIWQ 133
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEG-TEGTFKAQRKRISAKEED 203
HV+R++ ++KE + +DH K +D S G ++ K +KR E+D
Sbjct: 134 HVIRRKKIDSKERN-----KTSDHDKPNADNGNGRVSAGTGNSDQNGKPSKKRKDQDEDD 188
Query: 204 DGEL----ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 259
+ E +++D ST KKPRVVWSVELH++FVSAVNQLGIDKAVPK+IL+LMNV LTRE
Sbjct: 189 EEENEDGHDNEDSSTLKKPRVVWSVELHRKFVSAVNQLGIDKAVPKKILDLMNVEKLTRE 248
Query: 260 NVASHLQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSL-GRFDIQALAAS 317
NVASH LQK+RLYLKR++ V+ +Q + + + +++GSL G +Q L
Sbjct: 249 NVASH-----LQKYRLYLKRISCVANRQANLVAALGTADSSYLRMGSLSGVGHMQTLTGP 303
Query: 318 GQI 320
Q
Sbjct: 304 QQF 306
>gi|162460462|ref|NP_001104863.1| response regulator 9 [Zea mays]
gi|14189890|dbj|BAB55874.1| response regulator 9 [Zea mays]
Length = 631
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 167/319 (52%), Positives = 213/319 (66%), Gaps = 40/319 (12%)
Query: 8 VQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAA 67
+Q+ G+G+ DQFP G+RVL VDDD TCL+ILE +L RC Y+VTT QAA
Sbjct: 8 LQARASGGHGAK--------DQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQAA 59
Query: 68 VALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRH 124
AL +LRE+K FD+V+SDVHMPDMDGFKLLE +GLEMDLPVI +G VM+GI H
Sbjct: 60 TALKLLREKKDQFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITH 119
Query: 125 GACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNE 184
GACDYL+KP+R E+L+ IWQHVVR+R + K NSG+ + D K+ ++ S E
Sbjct: 120 GACDYLLKPVRIEQLRTIWQHVVRRRSCDAK---NSGN-DNDDSGKK----LQVVSV--E 169
Query: 185 GTEGTFKAQRKRISAK----------EEDDGELESDDPSTTKKPRVVWSVELHQQFVSAV 234
G G + KRIS K + DD E+ D S+ KKPRVVWSVELH++FV+AV
Sbjct: 170 GDNGGVN-RNKRISRKGRDDNGDDGDDSDDNSNENGDSSSQKKPRVVWSVELHRKFVAAV 228
Query: 235 NQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNG-VSQQGGITNSF 293
NQLGIDKAVPK+IL+LMNV +TRENVASH LQK+RLYLKRL+ S+Q +T +F
Sbjct: 229 NQLGIDKAVPKKILDLMNVENITRENVASH-----LQKYRLYLKRLSADASRQANLTAAF 283
Query: 294 CA--PIETNVKLGSLGRFD 310
P N+ L + +++
Sbjct: 284 GGRNPAYVNMGLDAFRQYN 302
>gi|356538109|ref|XP_003537547.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 585
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 154/260 (59%), Positives = 188/260 (72%), Gaps = 12/260 (4%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FPAGLRVLVVDDD T L+ILE+ML++C Y VTTC A AL +LRERK +D+V+SDV+M
Sbjct: 13 FPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNM 72
Query: 90 PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
PDMDGFKLLEH+GLEMDLPVI DG S VM+G++HGACDYL+KPIR +EL+NIWQHV
Sbjct: 73 PDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHV 132
Query: 147 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 206
+RKR +E KE E+ S E H R E+ ++ + T +RK K +D
Sbjct: 133 LRKRIHEAKEFESFESFESI-HLMRNGSELSDDGNLFAVEDVTSTKKRKDADNKHDDK-- 189
Query: 207 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
E DPS+TKK RVVWSV+LHQ+FV AVNQ+G DK PK+IL+LMNVP LTRENVASH
Sbjct: 190 -ECLDPSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASH-- 246
Query: 267 EINLQKFRLYLKRLNGVSQQ 286
LQK+RLYL R+ + Q
Sbjct: 247 ---LQKYRLYLSRIQKENDQ 263
>gi|357138369|ref|XP_003570765.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 615
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/336 (49%), Positives = 211/336 (62%), Gaps = 46/336 (13%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDDD TCL++LE +L RC Y+VTT QAA AL +LRE K FD+V+SDV
Sbjct: 15 DRFPVGMRVLAVDDDPTCLKVLESLLLRCDYHVTTTGQAATALRMLRENKDRFDLVISDV 74
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI +G VM+GI HGACDYL+KP+R E+LK IWQ
Sbjct: 75 HMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQ 134
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQR-KRISAKEE- 202
HVVR+ + RG+D + V G A R KR S ++E
Sbjct: 135 HVVRR-----------------NTKTRGNDNDDAGQKVQNGDGENGGANRNKRQSRRDEN 177
Query: 203 -DDGE------LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 255
DDG+ E+ D S+ KKPRVVWSVELH++FV+AVNQLGIDKAVPK+IL+LMNV
Sbjct: 178 GDDGDDSDENSNENADASSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEN 237
Query: 256 LTRENVASHLQEINLQKFRLYLKRLN-GVSQQGGITNSFCAPIETNVKLGSLGRFDI--Q 312
+TRENVASH LQK+RLYLKR++ S+Q + + N G++ D+
Sbjct: 238 ITRENVASH-----LQKYRLYLKRMSMDASRQANLVAALGG---RNPAYGNMNSLDVFRH 289
Query: 313 ALAASGQIPPQTLAALHAELLGRPTGNLVTAVDQPA 348
A G+ PP H++ + NLV ++ P+
Sbjct: 290 YNNAYGRYPP-VPTTTHSQ-----SNNLVARMNSPS 319
>gi|147787458|emb|CAN60088.1| hypothetical protein VITISV_005486 [Vitis vinifera]
Length = 706
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 173/362 (47%), Positives = 229/362 (63%), Gaps = 38/362 (10%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYN----------------VTTCS 64
A + V D FP G+RVL VDDD TCL +L+ +LRRC Y VTT +
Sbjct: 11 AGEDGVKDPFPVGMRVLAVDDDPTCLMLLDGLLRRCQYQGLVLLCFARLLLYMNFVTTTN 70
Query: 65 QAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI-----TDGRVSAVM 119
QA AL +LRE K FD+V+SDV MPDMDGFKLLE +GLEMDLPVI +D ++ VM
Sbjct: 71 QAITALKMLRENKNNFDLVISDVSMPDMDGFKLLELVGLEMDLPVIMLSSHSDQKL--VM 128
Query: 120 RGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYA 179
RGI HGACDYL+KP+R EELKNIWQHV+R++ ++K+ +N + ++ H G
Sbjct: 129 RGITHGACDYLLKPVRIEELKNIWQHVIRRKKIDSKD-QNKSADQDNALHADGEGGEGPP 187
Query: 180 SSVNEGTEGTFKAQRK---RISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQ 236
SS N G +RK +E ++ E++DPS+ KKPRVVWSVELH++FV+AVNQ
Sbjct: 188 SSSNADQNGKLNRKRKDQNEDEEEEGEENGEENEDPSSQKKPRVVWSVELHRKFVAAVNQ 247
Query: 237 LGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGV-SQQGGITNSFCA 295
LGI+KAVPKRIL+LMNV GLTRENVASH LQK+RLYLKR++ V +QQ +F A
Sbjct: 248 LGIEKAVPKRILDLMNVEGLTRENVASH-----LQKYRLYLKRISCVATQQANXVAAFGA 302
Query: 296 PIETNVKLGSLGRF-DIQALAASGQIPPQTLAALHAE-LLGR---PTGNLVTAVDQPALL 350
+ +++GSL F D + LA G++ +++ +LGR P G + + L+
Sbjct: 303 KDSSYMRMGSLDGFGDFRGLAGPGRLNSTAMSSYPPSGMLGRLNSPAGLSLRGLTSSGLI 362
Query: 351 QA 352
Q
Sbjct: 363 QT 364
>gi|357125033|ref|XP_003564200.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 654
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 150/266 (56%), Positives = 192/266 (72%), Gaps = 17/266 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD CL++LE +LRRC Y+VT +QA AL +LRE K FD+V+SDV
Sbjct: 20 DQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTATNQAITALKLLRENKDMFDLVISDV 79
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI +G V++GI HGACDYL+KP+R EEL+N+WQ
Sbjct: 80 HMPDMDGFKLLELVGLEMDLPVIMLSVNGETKTVLKGITHGACDYLLKPVRIEELRNVWQ 139
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEG-TEGTFKAQRKRISAKEED 203
HVVR++++ N+E N +E +D + V G ++ + +A +KR E+
Sbjct: 140 HVVRRKFS-NREPSNLDFCKEFS-KPPSADSYHGLNQVTCGSSDQSSRACKKRKELHSEE 197
Query: 204 DGEL------ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLT 257
+ E E+D+PS +K+PRVVWSVELH++FV+AVN LGIDKAVPKRILELMNV LT
Sbjct: 198 EDEGEDNDAQENDEPSASKRPRVVWSVELHRKFVAAVNHLGIDKAVPKRILELMNVEKLT 257
Query: 258 RENVASHLQEINLQKFRLYLKRLNGV 283
RENVASH LQK+RLYL+RL+ V
Sbjct: 258 RENVASH-----LQKYRLYLRRLSAV 278
>gi|224088246|ref|XP_002308388.1| predicted protein [Populus trichocarpa]
gi|222854364|gb|EEE91911.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/365 (43%), Positives = 229/365 (62%), Gaps = 28/365 (7%)
Query: 20 RAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGC 79
R + +FP G+R+L VDDD CL++LE +LR+C Y VTT +QA AL++LRE +
Sbjct: 7 RGGNSVNEKKFPVGMRILAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEMLRENRNK 66
Query: 80 FDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIRE 136
+D+V+SDV+MPDMDGFKLLE +GLEMDLPVI + G V +G+ HGA DYL+KP+R
Sbjct: 67 YDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSSHGDKEFVYKGVTHGAVDYLLKPVRM 126
Query: 137 EELKNIWQHVV-RKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRK 195
EELKNIWQHV+ RK+W ++ + + D G + S ++ + K + +
Sbjct: 127 EELKNIWQHVIRRKKWYPEDQNRSPNQDKGDDGAGEGEQGVTSTGSADQNGKLNRKRKDQ 186
Query: 196 RISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 255
+EE + +++ KKPRVVWSV+LHQ+FV+AVNQ+G+DKAVPK+IL+LMNV G
Sbjct: 187 DDEDEEEGEDGDDNEVSGNQKKPRVVWSVDLHQKFVAAVNQMGLDKAVPKKILDLMNVDG 246
Query: 256 LTRENVASHLQEINLQKFRLYLKRL-NGVSQQGGITNSFCAPIETNVKLGSLGRF-DIQA 313
LTRENVASH LQKFRLYLKRL +G +QQG + ++F A + +++ S+ F D ++
Sbjct: 247 LTRENVASH-----LQKFRLYLKRLSSGGNQQGNMVSAFGAKDSSYLQMSSVDGFGDFRS 301
Query: 314 LAASGQIPPQTLAALHAELLGRPTGNLVTAVDQPALLQATLQG--------PKCIPADHG 365
+ G++ +L++ P+G + ++ P L TLQG P +P + G
Sbjct: 302 MHGPGRLSTTSLSSY-------PSGTFLGRLNSPGGL--TLQGIASSGLHQPGLLPTNQG 352
Query: 366 VAFGQ 370
Q
Sbjct: 353 TNLFQ 357
>gi|298103724|emb|CBM42563.1| putative B-type response regulator 21 [Populus x canadensis]
Length = 563
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/315 (50%), Positives = 204/315 (64%), Gaps = 34/315 (10%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D FPAGLRVLVVDDD T L+ILE+ML+RC Y VTTC A AL++LRERKG +D+V+SDV
Sbjct: 11 DSFPAGLRVLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDALNLLRERKGGYDIVISDV 70
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
MPDMDGFKLLEH+GLEMDLPVI DG S VM+G++HGACDYL+KPIR +EL+NIWQ
Sbjct: 71 FMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 130
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HV RK+ +E ++ E +E + GSD+ E + G + T +RK I +K +
Sbjct: 131 HVFRKKIHEVRDIEILEGIESFQMTRNGSDQYEDGHFLC-GEDLTLIKKRKDIESKHD-- 187
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAV------------------PKR 246
E ++ D ++ KK RVVWSVELHQ+FV AVNQ+G D PK+
Sbjct: 188 -EKDNGDNTSAKKARVVWSVELHQKFVKAVNQIGFDTTSLSCFYRAMTSNVCLAEVGPKK 246
Query: 247 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRL---NGVSQQGGITNSFCAPIETNV-K 302
IL+LMNVP LTRENVASH LQK+RLYL RL N + G+ +P+ +V
Sbjct: 247 ILDLMNVPRLTRENVASH-----LQKYRLYLSRLQKGNDFNNPVGMIKQSDSPLSDSVGS 301
Query: 303 LGSLGRFDIQALAAS 317
GS ++Q + S
Sbjct: 302 FGSQNSINLQPIDVS 316
>gi|242064244|ref|XP_002453411.1| hypothetical protein SORBIDRAFT_04g005580 [Sorghum bicolor]
gi|241933242|gb|EES06387.1| hypothetical protein SORBIDRAFT_04g005580 [Sorghum bicolor]
Length = 631
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 161/314 (51%), Positives = 209/314 (66%), Gaps = 40/314 (12%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G+G+ DQFP G+RVL VDDD TCL++LE++L+ C Y+VTT QAA AL +
Sbjct: 15 GGGHGAK--------DQFPVGMRVLAVDDDPTCLKLLEKLLQHCQYHVTTTGQAATALKL 66
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDY 129
LRE+K FD+V+SDVHMPDMDGFKLLE +GLEMDLPVI +G VM+GI HGACDY
Sbjct: 67 LREKKDQFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDY 126
Query: 130 LIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGT 189
L+KP+R E+L+ IWQHVVR+R + K + N + D K+ ++ S+ EG G
Sbjct: 127 LLKPVRIEQLRTIWQHVVRRRSCDAKNNGN----DNDDSGKK----LQVVSA--EGDNGG 176
Query: 190 FKAQRKRIS----------AKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGI 239
+ KR S + D+ E+ D ST KKPRVVWSVELH++FV+AVNQLGI
Sbjct: 177 GN-RNKRTSRRGRDDNGDDGDDSDENSNENGDSSTQKKPRVVWSVELHRKFVAAVNQLGI 235
Query: 240 DKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNG-VSQQGGITNSFCA--P 296
DKAVPK+IL+LMNV +TRENVASH LQK+RLYLKRL+ S+Q +T +F P
Sbjct: 236 DKAVPKKILDLMNVENITRENVASH-----LQKYRLYLKRLSADASRQANLTAAFGGRNP 290
Query: 297 IETNVKLGSLGRFD 310
N+ L + +++
Sbjct: 291 AYVNMGLDAFRQYN 304
>gi|326500594|dbj|BAJ94963.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 150/261 (57%), Positives = 182/261 (69%), Gaps = 28/261 (10%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP G+RVL VDDD TCL++LE +LRRC Y+VTT QAA AL +LRE K FD+V+SDVHM
Sbjct: 18 FPVGMRVLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRMLRENKDQFDLVISDVHM 77
Query: 90 PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
PDMDGFKLLE +GLEMDLPVI +G VM+GI HGACDYL+KP+R E+LK IWQHV
Sbjct: 78 PDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLKTIWQHV 137
Query: 147 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 206
+R + +N GS + K + E E G K Q +R + DDG+
Sbjct: 138 IR------RNTKNRGSDNDDASQKGPNAEGE------NGGANRNKRQSRRDRDENGDDGD 185
Query: 207 LESD-------DPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 259
+SD D S+ KKPRVVWSVELH++FV+AVNQLGIDKAVPK+IL+LMNV +TRE
Sbjct: 186 -DSDENSNDNGDSSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRE 244
Query: 260 NVASHLQEINLQKFRLYLKRL 280
NVASH LQK+RLYLKR+
Sbjct: 245 NVASH-----LQKYRLYLKRM 260
>gi|297733626|emb|CBI14873.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 149/270 (55%), Positives = 183/270 (67%), Gaps = 47/270 (17%)
Query: 14 SGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL 73
SG+ S R + FPAGLRVLVVDDD T L+ILE+ML++C Y VTTC A AL++L
Sbjct: 3 SGFCSPRT------EAFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALNML 56
Query: 74 RERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYL 130
RERK FD+V+SDV+MPDMDGFKLLEH+GLEMDLPVI DG S VM+G++HGACDYL
Sbjct: 57 RERKDGFDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYL 116
Query: 131 IKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTF 190
+KP+R +ELKNIWQHV RK+ ++EG +
Sbjct: 117 LKPVRMKELKNIWQHVFRKK-------------------------------IHEGKDLGA 145
Query: 191 KAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILEL 250
+RK + + DD EL DPS++KK RVVWS++LHQ+FV AVNQ+G DK PK+IL+L
Sbjct: 146 TRKRKDMENRRHDDQELV--DPSSSKKARVVWSIDLHQKFVDAVNQIGFDKVGPKKILDL 203
Query: 251 MNVPGLTRENVASHLQEINLQKFRLYLKRL 280
MNVP LTRENVASH LQK+RLYL RL
Sbjct: 204 MNVPWLTRENVASH-----LQKYRLYLSRL 228
>gi|449450407|ref|XP_004142954.1| PREDICTED: two-component response regulator ARR11-like [Cucumis
sativus]
gi|449494494|ref|XP_004159561.1| PREDICTED: two-component response regulator ARR11-like [Cucumis
sativus]
Length = 583
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 153/270 (56%), Positives = 188/270 (69%), Gaps = 19/270 (7%)
Query: 14 SGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL 73
+G+ S R+ D FP GLRVLVVDDD T L+ILE+ML++C Y VTTC A AL +L
Sbjct: 3 NGFSSPRS------DVFPIGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCCLAREALSLL 56
Query: 74 RERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYL 130
RERK +D+V+SDV+MPDMDGFKLLEH+GLEMDLPVI DG S VM+G++HGACDYL
Sbjct: 57 RERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYL 116
Query: 131 IKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTF 190
+KPIR +EL+NIWQHV+RK+ E ++ E +E + +D + S G E
Sbjct: 117 LKPIRMKELRNIWQHVLRKKIQEGRDIEGHDVIEGIHILRNVADRYD-DSQFLRGEEPFS 175
Query: 191 KAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILEL 250
+RK I E+ D D S+TKK RVVWSVELHQ+FV AVNQ+G DK PK+IL+L
Sbjct: 176 VRKRKDIDKHEDKD----FCDTSSTKKARVVWSVELHQKFVKAVNQIGFDKVGPKKILDL 231
Query: 251 MNVPGLTRENVASHLQEINLQKFRLYLKRL 280
MNVP LTRENVASH LQK+RLYL RL
Sbjct: 232 MNVPWLTRENVASH-----LQKYRLYLSRL 256
>gi|2244969|emb|CAB10390.1| hypothetical protein [Arabidopsis thaliana]
gi|3549643|emb|CAA06433.1| receiver-like protein 5 [Arabidopsis thaliana]
gi|7268360|emb|CAB78653.1| hypothetical protein [Arabidopsis thaliana]
Length = 644
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 174/354 (49%), Positives = 220/354 (62%), Gaps = 43/354 (12%)
Query: 7 IVQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQA 66
+V G G S AA + D FPA LRVLVVDDD TCL ILE+ML CLY Q
Sbjct: 1 MVNPGHGRGPDSGTAAGGSNSDPFPANLRVLVVDDDPTCLMILERMLMTCLYR----EQR 56
Query: 67 AVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI-------------TDG 113
A L R + G FD+V+SDVHMPDMDGFKLLEH+GLEMDLPVI D
Sbjct: 57 AHCLCFGRTKNG-FDIVISDVHMPDMDGFKLLEHVGLEMDLPVINLNVLKPLVIVMSADD 115
Query: 114 RVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNE-NKEHENSGSLEET------ 166
S V++G+ HGA DYLIKP+R E LKNIWQHVVRK+ NE N + GS+E+T
Sbjct: 116 SKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDR 175
Query: 167 -DHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVE 225
H+ +D +SSVNEG ++ RKR + +D G+ + +D S+ KKPRVVWSVE
Sbjct: 176 QQQHREDAD--NNSSSVNEGNG---RSSRKRKEEEVDDQGD-DKEDSSSLKKPRVVWSVE 229
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LHQQFV+AVNQLG+D + +L + V + N+ + QK+R+YL+RL GVSQ
Sbjct: 230 LHQQFVAAVNQLGVDSELKTCLLMHLCV---SIGNI------VEFQKYRIYLRRLGGVSQ 280
Query: 286 -QGGITNSFCAPIETNV-KLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPT 337
QG + +SF + + L SL FD+Q+LA +GQ+PPQ+LA L A LGRPT
Sbjct: 281 HQGNMNHSFMTGQDQSFGPLSSLNGFDLQSLAVTGQLPPQSLAQLQAAGLGRPT 334
>gi|255565035|ref|XP_002523510.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223537217|gb|EEF38849.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 676
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 193/487 (39%), Positives = 275/487 (56%), Gaps = 72/487 (14%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDDD CL++L+ +L++C Y VTT +QA AL +LRE + +D+V+SDV
Sbjct: 12 DKFPVGMRVLAVDDDPICLKVLDTLLKKCQYQVTTTNQAIQALKMLRENRNKYDLVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVITDGRVS---AVMRGIRHGACDYLIKPIREEELKNIWQ 144
+MPDMDGFKLLE +GLEMDLPVI S V +G+ HGA DYL+KP+R EELKNIWQ
Sbjct: 72 NMPDMDGFKLLELVGLEMDLPVIMLSAHSDKELVYKGVTHGAVDYLLKPVRIEELKNIWQ 131
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HV+R++ + K+ S + D G+ E S + + K RKR E+++
Sbjct: 132 HVIRRKKLQPKDQSRS---QNQDKPLDGAGEGGQGMSSSGSEDQNGKVNRKRKDQDEDEE 188
Query: 205 GEL-----ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 259
E ++D+P KKPRVVWSVELH++FV+AVNQLG+DKAVPK+IL+LMNV GLTRE
Sbjct: 189 EEGEDNLNDTDEPGAQKKPRVVWSVELHRKFVAAVNQLGLDKAVPKKILDLMNVEGLTRE 248
Query: 260 NVASHLQEINLQKFRLYLKRLNGV-SQQGGITNSFCAPIETNVKLGSLGRF-DIQALAAS 317
NVASH LQK+RLYLKR++ SQQ + +F + +++ SL F + + L+
Sbjct: 249 NVASH-----LQKYRLYLKRISSTASQQANMVAAFGIKDSSYLRMASLDGFGEFRTLSGP 303
Query: 318 GQIPPQTLAALHAE-LLGR---PTGNLVTAVDQPALLQ--------------ATLQGPKC 359
G++ ++++ H +LGR P+G + + LLQ LQ P
Sbjct: 304 GRLSSTSISSYHPSGMLGRLNSPSGLTLRGIASSGLLQPGQSQSLSSSVNTLGKLQ-PTL 362
Query: 360 IPADHGVAFGQQLVKCQSNVPENLPQSIISV-------DDASTGFGVWASNS-----LGA 407
+ + GV Q + S++ N QS S +D S+GF + S S +G+
Sbjct: 363 LHSSQGVNLFQGI---PSSLEPNQLQSKSSAHFGEFNRNDDSSGFSLTNSFSDARVTIGS 419
Query: 408 VASTSNLGGLNPQNGNMLMDILHQQQQKQQNQQSQQQSTLSETSRSISVQPSCLVVPSRS 467
+++T+ NP M++ Q QQNQ + + S L VPS +
Sbjct: 420 LSNTATGPSSNP----MML-----QAHPQQNQNT-----------GVFATQSSLSVPSLN 459
Query: 468 SASFQAG 474
SF G
Sbjct: 460 QESFDVG 466
>gi|298103728|emb|CBM42565.1| putative B-type response regulator 14 [Populus x canadensis]
Length = 594
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 172/384 (44%), Positives = 226/384 (58%), Gaps = 42/384 (10%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D FPAGLRVLVVDDD T L+ILE+ML++C Y VTTC A AL++LRERKG +D+V+SDV
Sbjct: 12 DSFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALNLLRERKGGYDIVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
+MPDMDGFKLLE +GLEMDLPVI DG S VM+G++HGACDYL+KPIR +EL+NIWQ
Sbjct: 72 YMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQ 131
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HV RK+ +E ++ E +E + GSD+ E V G + T +RK +K +
Sbjct: 132 HVFRKKIHEVRDIETLERVESFQMTRNGSDQYE-DGHVLCGEDLTSIKKRKHFESKHD-- 188
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAV------------------PKR 246
E ++ D +TKK RVVWSV+LHQ+FV AVNQ+G D PK+
Sbjct: 189 -EKDTGDSISTKKARVVWSVDLHQKFVKAVNQIGFDTTSLPSFDGAMTGSVCLAEVGPKK 247
Query: 247 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRL---NGVSQQGGITNSFCAPIETNVK- 302
IL++MNVP LTRENVASH LQK+RLYL RL N G T +P+ + +
Sbjct: 248 ILDMMNVPWLTRENVASH-----LQKYRLYLSRLQKENDFKNPAGGTKQSDSPLRDSARS 302
Query: 303 LGSLGRFDIQALAASG---QIPPQTLAALHAELLGRPTGN---LVTAVDQPA-LLQATLQ 355
GS ++Q S + +L + + + + T V++P L +
Sbjct: 303 FGSQNSINLQPNDVSNGSYRFSGSSLVVHNGDPRSHDSDRKRLVSTPVEEPKRTLTVNVP 362
Query: 356 GPKCIPADHGVAFGQQLVKCQSNV 379
P CIP + FG L QS V
Sbjct: 363 NP-CIPRSSQMEFGHPLAPPQSEV 385
>gi|168015656|ref|XP_001760366.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688380|gb|EDQ74757.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 154/277 (55%), Positives = 192/277 (69%), Gaps = 26/277 (9%)
Query: 24 VAVPDQF-PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDV 82
+A P+ F PAGL+VLVVDDD L+ILE+MLR C Y VTTC+ A AL +LRE + FD+
Sbjct: 4 LAHPEGFSPAGLKVLVVDDDNVILKILERMLRECKYAVTTCNSATKALAMLRENRSYFDL 63
Query: 83 VLSDVHMPDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEEL 139
V+SDV+MPDMDGFKLLE IGLE+DLPVI DG + +VMRGI+HGACDYL+KP+R EEL
Sbjct: 64 VISDVYMPDMDGFKLLEAIGLELDLPVIMMSRDGEIDSVMRGIKHGACDYLLKPVRLEEL 123
Query: 140 KNIWQHVVRKRWNEN-KEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRIS 198
+NIWQHVVRK + E SG L+E H+ +D F A ++
Sbjct: 124 RNIWQHVVRKLVSPILVSKEESGELDEYPKHQDNAD---------------FDATSRKRK 168
Query: 199 AKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 258
+ ED+ +L +D + KK R+VWS ELHQQFV+AVN LG+DKAVP++IL++MNV GLTR
Sbjct: 169 ERLEDETQL-VEDVNNLKKARIVWSPELHQQFVNAVNYLGVDKAVPRKILDIMNVQGLTR 227
Query: 259 ENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCA 295
ENVASH LQK+R YLKRL GV+ Q SF A
Sbjct: 228 ENVASH-----LQKYRSYLKRLIGVTPQPHPVASFQA 259
>gi|356556600|ref|XP_003546612.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 697
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/310 (50%), Positives = 205/310 (66%), Gaps = 38/310 (12%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDDD CL++LE +LR+C Y+VTT +QA AL +LRE + FD+V+SDV
Sbjct: 13 DRFPVGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALKMLRENRNKFDLVISDV 72
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
+MPD+DGFKLLE +GLEMDLPVI G VM+G+ HGACDYL+KP+R EELKNIWQ
Sbjct: 73 NMPDIDGFKLLELVGLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEELKNIWQ 132
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKA----QRKRISAK 200
HVVR++ N + +N S EE + G EG++G Q KR+ K
Sbjct: 133 HVVRRK-NFDSRDQNKASNEEKAPNIAG-----------EGSQGLRSENSADQNKRLGKK 180
Query: 201 EEDDG---------ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELM 251
+D + +DPS KKPRVVWSVELH++FV+AVNQLG+DKAVPK+IL+LM
Sbjct: 181 RKDQSEEEEEDGEENGDDEDPSAQKKPRVVWSVELHRKFVAAVNQLGLDKAVPKKILDLM 240
Query: 252 NVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSL-GRFD 310
NV GLTRENVASH LQK+RLYLK+ +QQ + + ++ +++GS+ G D
Sbjct: 241 NVEGLTRENVASH-----LQKYRLYLKK---AAQQANMVAALGGS-DSYLRMGSIDGYGD 291
Query: 311 IQALAASGQI 320
+ SG+I
Sbjct: 292 FCTSSGSGRI 301
>gi|297825553|ref|XP_002880659.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
gi|297326498|gb|EFH56918.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
Length = 611
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/331 (49%), Positives = 220/331 (66%), Gaps = 25/331 (7%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL+ILE +LR C Y+VTT ++A AL++LRE K FD+V+SDV
Sbjct: 11 DQFPVGMRVLAVDDDQTCLKILETLLRHCQYHVTTTNEAQKALELLRENKNKFDLVISDV 70
Query: 88 HMPDMDGFKLLEHIGLEMDLPVITDGRVS---AVMRGIRHGACDYLIKPIREEELKNIWQ 144
MPDMDGFKLLE +GLEMDLPVI S VM+G+ HGACDYL+KP+R EELKNIWQ
Sbjct: 71 DMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKFVMKGVTHGACDYLLKPVRIEELKNIWQ 130
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HVVR R+++N+ N + + G++ + Y+ N G +RK +++D+
Sbjct: 131 HVVRSRFDKNRGSNNGDKRDGS-----GNEGVGYSDQNN----GRANRKRKDQYNEDDDE 181
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
+ ++DD S KK RVVW+VELH++FV+AVNQLG +KA+PK+IL+LMNV LTRENVASH
Sbjct: 182 EKDDNDDSSAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASH 241
Query: 265 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRFDIQAL-AASGQI-- 320
LQKFRLYLKR++GV+ QQ + NS ++ + L L F+ + + SGQ
Sbjct: 242 -----LQKFRLYLKRISGVANQQAIMANSDLHFLQMSSSLNGLDGFNHRPIPVGSGQFHG 296
Query: 321 -PPQTLAALHAELLGR---PTGNLVTAVDQP 347
P + E+LGR P+G V + P
Sbjct: 297 GAPAMRSFTPNEILGRLNTPSGIGVRNLSSP 327
>gi|225437477|ref|XP_002269371.1| PREDICTED: two-component response regulator ARR2-like [Vitis
vinifera]
Length = 519
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 150/306 (49%), Positives = 197/306 (64%), Gaps = 32/306 (10%)
Query: 19 SRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKG 78
S + AVP QFP G+RVL VDDD TCL+I+ +ML RC+Y VT C A AL +LRE
Sbjct: 9 SMSVTAAVPLQFPEGIRVLAVDDDQTCLQIMGRMLERCMYKVTKCRNAEEALSLLREDSS 68
Query: 79 CFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIR 135
FD+VLSD+HMPD+ G KLLE IGLEMD+PV+ +D + +M+GI HGACDY +KP+R
Sbjct: 69 RFDIVLSDLHMPDISGLKLLEIIGLEMDMPVVMMSSDEKRETIMKGIIHGACDYWVKPVR 128
Query: 136 EEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRK 195
+ ++ +WQHV+RKR N KE E++ D++E + EG+ +RK
Sbjct: 129 MDAIQLVWQHVIRKRRNGLKEMEHA-----------MEDDVEGGNE-----EGSRSMKRK 172
Query: 196 RISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 255
+ ED+GE + P+T KKPR+VW+ LHQQFV+AVNQLG KAVPK+ILE MN+PG
Sbjct: 173 K---DREDEGESRNAMPTTVKKPRMVWTPALHQQFVAAVNQLGYSKAVPKKILEQMNLPG 229
Query: 256 LTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIE---TNVKLGSLGRFDIQ 312
LTRENVASH LQKFRLYL R++ +SQ G ++ P N +L +G +Q
Sbjct: 230 LTRENVASH-----LQKFRLYLSRVSEISQ--GPEKTYMNPASLNGCNPQLNVVGEVPLQ 282
Query: 313 ALAASG 318
L G
Sbjct: 283 GLTREG 288
>gi|356530639|ref|XP_003533888.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 676
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/312 (50%), Positives = 206/312 (66%), Gaps = 32/312 (10%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDDD CL++LE +LR+C Y+VTT +QA AL +LRE + FD+V+SDV
Sbjct: 13 DRFPVGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALTMLRENRNKFDLVISDV 72
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
+MPD+DGFKLLE +GLEMDLPVI G VM+G+ HGACDYL+KP+R EELKNIWQ
Sbjct: 73 NMPDIDGFKLLELVGLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEELKNIWQ 132
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKA-QRKRISAKEED 203
HVVR++ N + +N S EE + +A ++G A Q KR+ K +D
Sbjct: 133 HVVRRK-NFDSRDQNKASNEEKAPN--------FAGGGSQGLRSENSADQNKRLGKKRKD 183
Query: 204 DG---------ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVP 254
+ +DPS KK RVVWSVELH++FV+AVNQLG+DKAVPK+IL+LMNV
Sbjct: 184 QSDEEEEGGEENEDDEDPSAQKKARVVWSVELHRKFVAAVNQLGLDKAVPKKILDLMNVE 243
Query: 255 GLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSL-GRFDIQA 313
GLTRENVASH LQK+RLYLK+ +QQ + + ++ +++GS+ G D
Sbjct: 244 GLTRENVASH-----LQKYRLYLKK---AAQQANMVAALGGS-DSYLRIGSIDGYGDFCT 294
Query: 314 LAASGQIPPQTL 325
+ SG+I TL
Sbjct: 295 SSGSGRITNATL 306
>gi|255084361|ref|XP_002508755.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas sp. RCC299]
gi|226524032|gb|ACO70013.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas sp. RCC299]
Length = 488
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 167/343 (48%), Positives = 204/343 (59%), Gaps = 45/343 (13%)
Query: 25 AVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVL 84
AV FP GLRVLVVDDD CL+I+E+ML+RC Y VTT S+ A AL LRERK FD+VL
Sbjct: 5 AVSKGFPIGLRVLVVDDDPLCLKIVEKMLKRCQYEVTTFSRGAEALKTLRERKDDFDIVL 64
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKN 141
SDVHMPDMDGFKLLEHI LE+D+PV+ + V+RGI HGA DYL+KP+R EEL+N
Sbjct: 65 SDVHMPDMDGFKLLEHIALELDIPVMMMSANCATDVVLRGIIHGAVDYLLKPVRIEELRN 124
Query: 142 IWQHVVRKRWNENKEHENSG---------------------SLEETDHHKRGSDEIEYAS 180
IWQHVVR++ ++ + SG S ++ H D+ A
Sbjct: 125 IWQHVVRRKRESSQGNLRSGEGGSNGRTVSGGSTGEGGGKDSKGSSEQHGDAKDKTGSAG 184
Query: 181 SVNEGTEGTFKAQRKRISAKEE---DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL 237
++ + +K +E G E++D S KKPRVVWS ELHQQFV+AVNQL
Sbjct: 185 GSGGSSKRKKGSGKKGDEGTDEVKDGSGGDENEDSSALKKPRVVWSAELHQQFVTAVNQL 244
Query: 238 GIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVS--QQGGITNSFCA 295
GIDKAVPKRIL+LM V GLTRENVASH LQK+RLYLKRL GV+ G F +
Sbjct: 245 GIDKAVPKRILDLMGVQGLTRENVASH-----LQKYRLYLKRLQGVNSGGAPGGGPGFMS 299
Query: 296 PIETN---VKLGSLGRFDIQALAAS--------GQIPPQTLAA 327
PI + V+ G GR A+ G I P LA
Sbjct: 300 PIALDGSMVQGGPGGRVGSPAIGGPNGPIMVGHGHIDPAMLAG 342
>gi|25365080|pir||C84645 hypothetical protein At2g25180 [imported] - Arabidopsis thaliana
Length = 573
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 153/267 (57%), Positives = 187/267 (70%), Gaps = 20/267 (7%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL+ILE +LR C Y+VTT +QA AL++LRE K FD+V+SDV
Sbjct: 11 DQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDV 70
Query: 88 HMPDMDGFKLLEHIGLEMDLPVITDGRVS---AVMRGIRHGACDYLIKPIREEELKNIWQ 144
MPDMDGFKLLE +GLEMDLPVI S VM+G+ HGACDYL+KP+R EELKNIWQ
Sbjct: 71 DMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQ 130
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HVVR R+++N+ N+G D +E S N G K RKR ED+
Sbjct: 131 HVVRSRFDKNRGSNNNG-----DKRDGSGNEGVGNSDPNNG-----KGNRKRKDQYNEDE 180
Query: 205 GELESDDPSTT--KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 262
E D+ + KK RVVW+VELH++FV+AVNQLG +KA+PK+IL+LMNV LTRENVA
Sbjct: 181 DEDRDDNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVA 240
Query: 263 SHLQEINLQKFRLYLKRLNGVSQQGGI 289
SH LQKFRLYLKR++GV+ Q I
Sbjct: 241 SH-----LQKFRLYLKRISGVANQQAI 262
>gi|240254528|ref|NP_180090.6| response regulator 12 [Arabidopsis thaliana]
gi|378405150|sp|P62598.2|ARR12_ARATH RecName: Full=Two-component response regulator ARR12
gi|330252573|gb|AEC07667.1| response regulator 12 [Arabidopsis thaliana]
Length = 596
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 150/265 (56%), Positives = 188/265 (70%), Gaps = 16/265 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL+ILE +LR C Y+VTT +QA AL++LRE K FD+V+SDV
Sbjct: 11 DQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDV 70
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
MPDMDGFKLLE +GLEMDLPVI VM+G+ HGACDYL+KP+R EELKNIWQ
Sbjct: 71 DMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQ 130
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HVVR R+++N+ N+G + GS +S +G K RK ++ED+
Sbjct: 131 HVVRSRFDKNRGSNNNGDKRD------GSGNEGVGNSDQNNGKGNRK--RKDQYNEDEDE 182
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
++DD KK RVVW+VELH++FV+AVNQLG +KA+PK+IL+LMNV LTRENVASH
Sbjct: 183 DRDDNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASH 242
Query: 265 LQEINLQKFRLYLKRLNGVSQQGGI 289
LQKFRLYLKR++GV+ Q I
Sbjct: 243 -----LQKFRLYLKRISGVANQQAI 262
>gi|145340805|ref|XP_001415508.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575731|gb|ABO93800.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 270
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 153/274 (55%), Positives = 189/274 (68%), Gaps = 25/274 (9%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FPAGL VLVVDDD+ CL+++E+ML+ C Y VT CS A AL+ILR RK FD+VLSDVHM
Sbjct: 1 FPAGLGVLVVDDDLLCLKVVEKMLKACKYKVTACSTAKTALEILRTRKEEFDIVLSDVHM 60
Query: 90 PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
PDMDGFKLLE I E+ LPV+ + S V+RGI HGA DYL+KP+R EEL+NIWQHV
Sbjct: 61 PDMDGFKLLEIIQFELALPVLMMSANSDSSVVLRGIIHGAVDYLLKPVRIEELRNIWQHV 120
Query: 147 VRKRWNENKEHENSGS--LEETDHHKRG--------SDEIEY-ASSVNEG-TEGTFKAQR 194
VR+ ++ K +SGS +E + KR S+E++ AS ++ G ++
Sbjct: 121 VRRDYSSAK---SSGSEDVEASSPSKRAKTSGSNSKSEEVDRTASEMSSGKARKKPTGKK 177
Query: 195 KRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVP 254
S KE + ++ D S +KKPRVVWS ELH QFV+AVNQLGIDKAVPKRIL+LM V
Sbjct: 178 GGKSVKEAEKKDVV--DNSNSKKPRVVWSAELHAQFVTAVNQLGIDKAVPKRILDLMGVQ 235
Query: 255 GLTRENVASHLQEINLQKFRLYLKRLNGVSQQGG 288
GLTRENVASH LQK+RLYLKRL G +GG
Sbjct: 236 GLTRENVASH-----LQKYRLYLKRLQGNDARGG 264
>gi|297743941|emb|CBI36911.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 151/328 (46%), Positives = 200/328 (60%), Gaps = 49/328 (14%)
Query: 19 SRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKG 78
S + AVP QFP G+RVL VDDD TCL+I+ +ML RC+Y VT C A AL +LRE
Sbjct: 9 SMSVTAAVPLQFPEGIRVLAVDDDQTCLQIMGRMLERCMYKVTKCRNAEEALSLLREDSS 68
Query: 79 CFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIR 135
FD+VLSD+HMPD+ G KLLE IGLEMD+PV+ +D + +M+GI HGACDY +KP+R
Sbjct: 69 RFDIVLSDLHMPDISGLKLLEIIGLEMDMPVVMMSSDEKRETIMKGIIHGACDYWVKPVR 128
Query: 136 EEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRK 195
+ ++ +WQHV+RKR N KE E++ D++E + EG+ +RK
Sbjct: 129 MDAIQLVWQHVIRKRRNGLKEMEHA-----------MEDDVEGGNE-----EGSRSMKRK 172
Query: 196 RISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPG 255
+ ED+GE + P+T KKPR+VW+ LHQQFV+AVNQLG KAVPK+ILE MN+PG
Sbjct: 173 K---DREDEGESRNAMPTTVKKPRMVWTPALHQQFVAAVNQLGYSKAVPKKILEQMNLPG 229
Query: 256 LTRENVASHLQEIN----------------------LQKFRLYLKRLNGVSQQGGITNSF 293
LTRENVASHLQ + +QKFRLYL R++ +SQ G ++
Sbjct: 230 LTRENVASHLQVMEKIFSRKIYCYCLVKDTDNYSYMVQKFRLYLSRVSEISQ--GPEKTY 287
Query: 294 CAPIE---TNVKLGSLGRFDIQALAASG 318
P N +L +G +Q L G
Sbjct: 288 MNPASLNGCNPQLNVVGEVPLQGLTREG 315
>gi|302799824|ref|XP_002981670.1| hypothetical protein SELMODRAFT_115021 [Selaginella moellendorffii]
gi|300150502|gb|EFJ17152.1| hypothetical protein SELMODRAFT_115021 [Selaginella moellendorffii]
Length = 413
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/273 (55%), Positives = 186/273 (68%), Gaps = 15/273 (5%)
Query: 28 DQF-PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSD 86
D F P GL+VLVVDDD CL +LE+MLR C Y VTTCS+A AL ILRERK FDVV+SD
Sbjct: 2 DHFSPTGLKVLVVDDDPCCLTLLERMLRECKYAVTTCSRATAALTILRERKESFDVVISD 61
Query: 87 VHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIW 143
VHMPDMDGFKLLE IGLEM +PVI G AVM+G+ +GACDYL+KP+R EEL+NIW
Sbjct: 62 VHMPDMDGFKLLELIGLEMGIPVIMMSASGETDAVMKGVVYGACDYLVKPVRIEELRNIW 121
Query: 144 QHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEED 203
QHVVR+R ++ + + EE + R + SS + ++KR S
Sbjct: 122 QHVVRRRTKDSAVRDEAP--EEWEDFMRSTPT---DSSEEADVDLRLLRKKKRPSCDFGG 176
Query: 204 DGELES-DDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 262
G ES ++ KK RVVWS +LHQQFV A+N +GI+KAVPKRILE+MN+ GLTRENVA
Sbjct: 177 GGGDESMRSIASNKKARVVWSFDLHQQFVKAINHIGIEKAVPKRILEVMNIQGLTRENVA 236
Query: 263 SHLQEINLQKFRLYLKRLNGVSQQGGITNSFCA 295
SH LQK+RLYLKRL+GV+ + SF A
Sbjct: 237 SH-----LQKYRLYLKRLSGVTPEPFPIASFQA 264
>gi|302768857|ref|XP_002967848.1| type B response regulator [Selaginella moellendorffii]
gi|300164586|gb|EFJ31195.1| type B response regulator [Selaginella moellendorffii]
Length = 414
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/273 (55%), Positives = 186/273 (68%), Gaps = 15/273 (5%)
Query: 28 DQF-PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSD 86
D F P GL+VLVVDDD CL +LE+MLR C Y VTTCS+A AL ILRERK FDVV+SD
Sbjct: 2 DHFSPTGLKVLVVDDDPCCLTLLERMLRECKYAVTTCSRATAALTILRERKESFDVVISD 61
Query: 87 VHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIW 143
VHMPDMDGFKLLE IGLEM +PVI G AVM+G+ +GACDYL+KP+R EEL+NIW
Sbjct: 62 VHMPDMDGFKLLELIGLEMGIPVIMMSASGETDAVMKGVVYGACDYLVKPVRIEELRNIW 121
Query: 144 QHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEED 203
QHVVR+R ++ + + EE + R + SS + ++KR S
Sbjct: 122 QHVVRRRTKDSAVRDEAP--EEWEDFMRSTPT---DSSEEADVDLRLLRKKKRPSCDFGG 176
Query: 204 DGELES-DDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 262
G ES ++ KK RVVWS +LHQQFV A+N +GI+KAVPKRILE+MN+ GLTRENVA
Sbjct: 177 GGGDESVRSIASNKKARVVWSFDLHQQFVKAINHIGIEKAVPKRILEVMNIQGLTRENVA 236
Query: 263 SHLQEINLQKFRLYLKRLNGVSQQGGITNSFCA 295
SH LQK+RLYLKRL+GV+ + SF A
Sbjct: 237 SH-----LQKYRLYLKRLSGVTPEPFPIASFQA 264
>gi|225430376|ref|XP_002282928.1| PREDICTED: two-component response regulator ARR12-like [Vitis
vinifera]
Length = 693
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/320 (51%), Positives = 215/320 (67%), Gaps = 16/320 (5%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCLR+L+ +LRRC Y+VTT SQA AL +LRE K FD+V+SDV
Sbjct: 12 DQFPIGMRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI + VM+GI HGACDYL+KP+R E+LKNIWQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNIWQ 131
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HV+R+R + ++ NS S ++ G + + G + + +E D+
Sbjct: 132 HVIRRRRFDPRDQNNSDSRDKRQGPGEGGQGSSEPGNPDHGKLNKKRKDQNEDDDEENDE 191
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
+++DPS+ KKPRVVWSVELH++FV+AVNQLGID+AVPK+IL+LMNV LTRENVASH
Sbjct: 192 NGHDNEDPSSQKKPRVVWSVELHRKFVAAVNQLGIDRAVPKKILDLMNVEKLTRENVASH 251
Query: 265 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVK-LGSLGRFDIQALAASGQIPP 322
LQK+RLYLKR++ V+ QQ + + + T + L LG F L+ SGQ+P
Sbjct: 252 -----LQKYRLYLKRISCVANQQANMVAALGSTDSTYLHSLNGLGNF--YNLSGSGQLPN 304
Query: 323 QTLAALHAE-LLGR---PTG 338
T + +LGR P+G
Sbjct: 305 STFRSFPPSGMLGRLNTPSG 324
>gi|296082079|emb|CBI21084.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/320 (51%), Positives = 215/320 (67%), Gaps = 16/320 (5%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCLR+L+ +LRRC Y+VTT SQA AL +LRE K FD+V+SDV
Sbjct: 12 DQFPIGMRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI + VM+GI HGACDYL+KP+R E+LKNIWQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNIWQ 131
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HV+R+R + ++ NS S ++ G + + G + + +E D+
Sbjct: 132 HVIRRRRFDPRDQNNSDSRDKRQGPGEGGQGSSEPGNPDHGKLNKKRKDQNEDDDEENDE 191
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
+++DPS+ KKPRVVWSVELH++FV+AVNQLGID+AVPK+IL+LMNV LTRENVASH
Sbjct: 192 NGHDNEDPSSQKKPRVVWSVELHRKFVAAVNQLGIDRAVPKKILDLMNVEKLTRENVASH 251
Query: 265 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVK-LGSLGRFDIQALAASGQIPP 322
LQK+RLYLKR++ V+ QQ + + + T + L LG F L+ SGQ+P
Sbjct: 252 -----LQKYRLYLKRISCVANQQANMVAALGSTDSTYLHSLNGLGNF--YNLSGSGQLPN 304
Query: 323 QTLAALHAE-LLGR---PTG 338
T + +LGR P+G
Sbjct: 305 STFRSFPPSGMLGRLNTPSG 324
>gi|147863919|emb|CAN81109.1| hypothetical protein VITISV_010435 [Vitis vinifera]
Length = 693
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 165/320 (51%), Positives = 215/320 (67%), Gaps = 16/320 (5%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCLR+L+ +LRRC Y+VTT SQA AL +LRE K FD+V+SDV
Sbjct: 12 DQFPIGMRVLAVDDDPTCLRLLDTLLRRCQYHVTTTSQAITALKMLRENKNQFDLVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI + VM+GI HGACDYL+KP+R E+LKNIWQ
Sbjct: 72 HMPDMDGFKLLELVGLEMDLPVIMLSANDDPKLVMKGITHGACDYLLKPVRIEQLKNIWQ 131
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HV+R+R + ++ NS S ++ G + + G + + +E D+
Sbjct: 132 HVIRRRRFDPRDQNNSDSRDKRQGPGEGGQGSSEPGNPDHGKLNKKRKDQNEDDDEENDE 191
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
+++DPS+ KKPRVVWSVELH++FV+AVNQLGID+AVPK+IL+LMNV LTRENVASH
Sbjct: 192 NGHDNEDPSSQKKPRVVWSVELHRKFVAAVNQLGIDRAVPKKILDLMNVEKLTRENVASH 251
Query: 265 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVK-LGSLGRFDIQALAASGQIPP 322
LQK+RLYLKR++ V+ QQ + + + T + L LG F L+ SGQ+P
Sbjct: 252 -----LQKYRLYLKRISCVANQQANMVAALGSTDSTYLHSLNGLGNF--YNLSGSGQLPN 304
Query: 323 QTLAALHAE-LLGR---PTG 338
T + +LGR P+G
Sbjct: 305 STFRSFPPSGMLGRLNTPSG 324
>gi|384254096|gb|EIE27570.1| CheY-like protein [Coccomyxa subellipsoidea C-169]
Length = 302
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 150/276 (54%), Positives = 185/276 (67%), Gaps = 28/276 (10%)
Query: 10 SSGGSGY---GSSRAADVAVPD---QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTC 63
SSG G+ G D+A D FPAGL+VLVVDDD CL+++E MLRRC Y VTTC
Sbjct: 24 SSGRRGFPHSGEMSGEDLARSDSWEMFPAGLKVLVVDDDPLCLKVVEHMLRRCNYQVTTC 83
Query: 64 SQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMR 120
AL+ LR+R FD+VLSDV+MPDMDGFKLLEHIGLE+DLPVI ++G + V+R
Sbjct: 84 PNGKAALEKLRDRSVHFDLVLSDVYMPDMDGFKLLEHIGLELDLPVIMMSSNGETNVVLR 143
Query: 121 GIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYAS 180
G+ HGA D+LIKP+R EEL+N+WQHVVR++ ++ ++ + + SDE
Sbjct: 144 GVTHGAVDFLIKPVRVEELRNVWQHVVRRKRDQ--------AVSQARDSRDISDE----- 190
Query: 181 SVNEGTEGTFKAQRKR---ISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL 237
EGT+ +KR I D +SDD + KK RVVWSVE+HQQFV AVNQL
Sbjct: 191 ---EGTDDGKPRDKKRKEVILVLWWDMQRRDSDDGVSAKKARVVWSVEMHQQFVQAVNQL 247
Query: 238 GIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 273
GIDKAVPKRIL+LMNV GLTRENVASHLQ +L F
Sbjct: 248 GIDKAVPKRILDLMNVDGLTRENVASHLQVPHLSIF 283
>gi|413951616|gb|AFW84265.1| putative two-component response regulator family protein [Zea mays]
Length = 598
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 150/282 (53%), Positives = 181/282 (64%), Gaps = 55/282 (19%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYN------------------VTTCSQAAVALD 71
FP GLRVLVVDDD T L+ILE+MLR+C Y VTTC A+VAL
Sbjct: 9 FPYGLRVLVVDDDPTWLKILEKMLRKCSYEDAMSDRTVIARTGGISSCVTTCGLASVALQ 68
Query: 72 ILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIT-------------DGRVSAV 118
ILRER+ FD+V+SDV+MPDMDGFKLLE IGLEMDLPVI+ DG S V
Sbjct: 69 ILRERRNKFDIVISDVNMPDMDGFKLLELIGLEMDLPVISTKLLQSVSTVMSIDGETSRV 128
Query: 119 MRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEY 178
M+G+ HGACDYL+KP+R +EL+NIWQHV RK+ +E KE E+ G DE
Sbjct: 129 MKGVHHGACDYLLKPVRMKELRNIWQHVYRKKMHEVKEIED------------GLDERGL 176
Query: 179 ASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLG 238
+ T RKR ++D + +S D +T KK RVVWSV+LHQ+FV+AVNQ+G
Sbjct: 177 FMRADTDT------MRKRKEV-DKDHADQDSSDGATAKKARVVWSVDLHQKFVNAVNQIG 229
Query: 239 IDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRL 280
DK PK+IL+LMNV GLTRENVASH LQK+RLYL RL
Sbjct: 230 FDKVGPKKILDLMNVHGLTRENVASH-----LQKYRLYLSRL 266
>gi|168010903|ref|XP_001758143.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690599|gb|EDQ76965.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 239
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/260 (55%), Positives = 180/260 (69%), Gaps = 25/260 (9%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
PAGL+VLVVDD+ L I+E+ML+ C Y VTTC+ A AL +LRE + FD+V+SDV+MP
Sbjct: 1 PAGLKVLVVDDEPLALMIVERMLQICQYTVTTCNSATKALAMLRENRNYFDLVISDVYMP 60
Query: 91 DMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
DMDGFKLLE IGLE+DLPVI DG +VM+GIRHGACDYL+KP+R +EL NIWQHVV
Sbjct: 61 DMDGFKLLEAIGLELDLPVIMMSGDGETDSVMKGIRHGACDYLLKPVRLKELINIWQHVV 120
Query: 148 RKRWN-ENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 206
RK + E SG +E H+ +D F + ++ + ED +
Sbjct: 121 RKLVTPRDIPKEESGEWDEFPKHQDNAD---------------FDSTARKRKERSEDVAQ 165
Query: 207 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
L +D + KK RVVWS ELHQQFV+AVN LG+DKAVP++IL++MNV GLTRENVASH
Sbjct: 166 L-VEDVNNLKKARVVWSAELHQQFVNAVNYLGVDKAVPRKILDIMNVQGLTRENVASH-- 222
Query: 267 EINLQKFRLYLKRLNGVSQQ 286
LQK+RLYLKRL GV+ Q
Sbjct: 223 ---LQKYRLYLKRLIGVTPQ 239
>gi|15220515|ref|NP_176938.1| two-component response regulator ARR11 [Arabidopsis thaliana]
gi|50400646|sp|Q9FXD6.1|ARR11_ARATH RecName: Full=Two-component response regulator ARR11; AltName:
Full=Receiver-like protein 3
gi|11072012|gb|AAG28891.1|AC008113_7 F12A21.15 [Arabidopsis thaliana]
gi|31711702|gb|AAP68207.1| At1g67710 [Arabidopsis thaliana]
gi|110736401|dbj|BAF00169.1| response regulator 11 [Arabidopsis thaliana]
gi|332196565|gb|AEE34686.1| two-component response regulator ARR11 [Arabidopsis thaliana]
Length = 521
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 152/291 (52%), Positives = 197/291 (67%), Gaps = 25/291 (8%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P GLRVLVVDDD T L+ILE+ML++C Y VTTC A AL +LRERK +D+V+SDV+MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 91 DMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
DMDGFKLLEH+GLE+DLPVI DG S VM+G++HGACDYL+KPIR +ELK IWQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 148 RKRWNENKEHENSGSLEETDHHKRGSDEI---EYASSVNEGTEGTFKAQRKRISAKEEDD 204
RK+ E ++ E G ++ G+D I + A + G + +F +RK +++
Sbjct: 128 RKKLQEVRDIEGCG-------YEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLL 180
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGID-KAVPKRILELMNVPGLTRENVAS 263
+ S++KK RVVWS ELH +FV+AVNQ+G D KA PK+IL+LMNVP LTRENVAS
Sbjct: 181 QDESDPSSSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVAS 240
Query: 264 HLQEINLQKFRLYLKRLNGVSQ----QGGITNSFCAP--IETNVKLGSLGR 308
H LQK+RLYL RL + GG+ N+ +P +E N S GR
Sbjct: 241 H-----LQKYRLYLSRLEKGKELKCYSGGVKNADSSPKDVEVNSGYQSPGR 286
>gi|7576358|dbj|BAA94549.1| response regulator 11 [Arabidopsis thaliana]
Length = 457
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 152/291 (52%), Positives = 197/291 (67%), Gaps = 25/291 (8%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P GLRVLVVDDD T L+ILE+ML++C Y VTTC A AL +LRERK +D+V+SDV+MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 91 DMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
DMDGFKLLEH+GLE+DLPVI DG S VM+G++HGACDYL+KPIR +ELK IWQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 148 RKRWNENKEHENSGSLEETDHHKRGSDEI---EYASSVNEGTEGTFKAQRKRISAKEEDD 204
RK+ E ++ E G ++ G+D I + A + G + +F +RK +++
Sbjct: 128 RKKLQEVRDIEGCG-------YEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLL 180
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGID-KAVPKRILELMNVPGLTRENVAS 263
+ S++KK RVVWS ELH +FV+AVNQ+G D KA PK+IL+LMNVP LTRENVAS
Sbjct: 181 QDESDPSSSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVAS 240
Query: 264 HLQEINLQKFRLYLKRLNGVSQ----QGGITNSFCAP--IETNVKLGSLGR 308
H LQK+RLYL RL + GG+ N+ +P +E N S GR
Sbjct: 241 H-----LQKYRLYLSRLEKGKELKCYSGGVKNADSSPKDVEVNSGYQSPGR 286
>gi|297841471|ref|XP_002888617.1| hypothetical protein ARALYDRAFT_894522 [Arabidopsis lyrata subsp.
lyrata]
gi|297334458|gb|EFH64876.1| hypothetical protein ARALYDRAFT_894522 [Arabidopsis lyrata subsp.
lyrata]
Length = 529
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/285 (52%), Positives = 193/285 (67%), Gaps = 23/285 (8%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P GLRVLVVDDD T L+ILE+ML++C Y VTTC A AL +LRERK +D+V+SDV+MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 91 DMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
DMDGFKLLEH+GLE+DLPVI DG S VM+G++HGACDYL+KPIR +ELK IWQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 148 RKRWNENKEHENSGSLEETDHHKRGSDEI---EYASSVNEGTEGTFKAQRKRISAKEEDD 204
RK+ E ++ E G ++ G D I + A + G + +F +RK +++
Sbjct: 128 RKKLQEVRDIEGCG-------YEGGGDWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLL 180
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGID-KAVPKRILELMNVPGLTRENVAS 263
+ S++KK RVVWS ELHQ+FV+AVNQ+G D KA PK+IL+LMNVP LTRENVAS
Sbjct: 181 QDESDPSSSSSKKARVVWSFELHQKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVAS 240
Query: 264 HLQEINLQKFRLYLKRLNGVSQ----QGGITNSFCAPIETNVKLG 304
H LQK+RLYL RL + GG+ N +P + V G
Sbjct: 241 H-----LQKYRLYLSRLEKGKELKCYSGGVKNMDSSPKDVEVNSG 280
>gi|298103726|emb|CBM42564.1| putative B-type response regulator 22 [Populus x canadensis]
Length = 668
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 190/458 (41%), Positives = 268/458 (58%), Gaps = 52/458 (11%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL +LE +LRRC YNVTT SQA AL +LRE K FD+V+SDV
Sbjct: 13 DQFPIGMRVLAVDDDPTCLLLLETLLRRCQYNVTTTSQAITALRMLRENKNKFDLVISDV 72
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI +G VM+GI HGAC YL+KP+R EELK IWQ
Sbjct: 73 HMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACYYLLKPVRIEELKTIWQ 132
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HV+R++ ++NK+ +S + D +GS E +N+ + ++ED+
Sbjct: 133 HVIRRKKSDNKDRNSS---DNRDKPNQGSSEAVPDQKLNKKRKDQ-NGDDDEDHDEDEDE 188
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
E E++DP+T KKPRVVWS+ELH++FV+AVNQLG+DKAVPK+IL+LMNV LTRENVASH
Sbjct: 189 DEHENEDPTTQKKPRVVWSMELHRKFVAAVNQLGVDKAVPKKILDLMNVEKLTRENVASH 248
Query: 265 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQ 323
LQK+R YLKR++ V+ QQ + + + + +++ S+ + +LA S Q
Sbjct: 249 -----LQKYRHYLKRISTVANQQANMVAALGSSDASYLQMNSMSGLGLHSLAGSVQFHST 303
Query: 324 TLAALHAELLGRPTGNLVTAVDQPALLQAT-LQGPKCI-------------------PAD 363
+L P+ ++ ++ PA+L L P I P
Sbjct: 304 PFRSL-------PSSGMLDRLNSPAVLGIHGLPSPGVIQLGHVQTAPHMANGLSHFQPVG 356
Query: 364 H---------GVAFGQQLVKCQSNVPEN-LPQSIISVDDASTGFGVWASNSLGAVASTSN 413
H G+ +L + QSN N +P+ +DD ++ S ++ +A +SN
Sbjct: 357 HPGNNGNILQGMPMPLELDQIQSNKGVNYIPELPTHLDDTASFPVSSGSTNMKIIAGSSN 416
Query: 414 LGGLNPQNGNMLMDILHQQQQKQQNQQSQQQSTLSETS 451
+ N +++++ Q Q Q+S +QS+LS S
Sbjct: 417 SPFVGVSNKHLMLE--GHDQGLQDGQKSGKQSSLSAGS 452
>gi|224102357|ref|XP_002312648.1| type-b response regulator [Populus trichocarpa]
gi|222852468|gb|EEE90015.1| type-b response regulator [Populus trichocarpa]
Length = 642
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 173/432 (40%), Positives = 228/432 (52%), Gaps = 90/432 (20%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D FPAGLRVLVVDDD T L+ILE+ML++C Y VTTC A AL++LRERKG +D+V+SDV
Sbjct: 12 DSFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALNLLRERKGGYDIVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIT------------------------------------ 111
+MPDMDGFKLLE +GLEMDLPVI+
Sbjct: 72 YMPDMDGFKLLEQVGLEMDLPVISRFFSLTLEFYFNANIFYLRIHIPMSCLHYIYIGILI 131
Query: 112 ---------------DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKE 156
DG S VM+G++HGACDYL+KPIR +EL+NIWQHV RK+ +E ++
Sbjct: 132 QLLTSCACQLTVMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRD 191
Query: 157 HENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTK 216
E +E + GSD+ E V G + T +RK I +K + E ++ D +TK
Sbjct: 192 IETLERVESFQMTRNGSDQYE-DGHVLCGEDLTSIKKRKHIESKHD---EKDTGDSISTK 247
Query: 217 KPRVVWSVELHQQFVSAVNQLGIDKAV------------------PKRILELMNVPGLTR 258
K RVVWSV+LHQ+FV AVNQ+G D PK+IL++MNVP LTR
Sbjct: 248 KARVVWSVDLHQKFVKAVNQIGFDTTSLPSFDGAMTGSVCLAEVGPKKILDMMNVPWLTR 307
Query: 259 ENVASHLQEINLQKFRLYLKRL----NGVSQQGGITNSFCAPIETNVKLGSLGRFDIQ-- 312
ENVASH LQK+RLYL RL + + GGI S ++ GS ++Q
Sbjct: 308 ENVASH-----LQKYRLYLSRLQKENDFKNPAGGIKQSDSPLRDSAGSFGSQNSINLQHN 362
Query: 313 -ALAASGQIPPQTLAALHAELLGRPTGN---LVTAVDQPA-LLQATLQGPKCIPADHGVA 367
S + +L + + + + T V++P L + P CIP +
Sbjct: 363 DVSNGSYRFSGSSLVVHNGDPRSHDSDRKRLVSTPVEEPKRTLTVNVPNP-CIPRSSQME 421
Query: 368 FGQQLVKCQSNV 379
FG L QS V
Sbjct: 422 FGHPLAPPQSEV 433
>gi|3549639|emb|CAA06431.1| receiver-like protein 3 [Arabidopsis thaliana]
Length = 444
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 151/291 (51%), Positives = 195/291 (67%), Gaps = 25/291 (8%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P GLRVLVVDDD T L+ILE+ML++C Y VTTC A AL +LRERK +D+V+SDV+MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 91 DMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
DMDGFKLLEH+GLE+DLPVI DG S VM+G+ GACDYL+KPIR +ELK IWQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVHTGACDYLLKPIRMKELKIIWQHVL 127
Query: 148 RKRWNENKEHENSGSLEETDHHKRGSDEI---EYASSVNEGTEGTFKAQRKRISAKEEDD 204
RK+ E ++ E G ++ G+D I + A + G + +F +RK +++
Sbjct: 128 RKKLQEVRDIEGCG-------YEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLL 180
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGID-KAVPKRILELMNVPGLTRENVAS 263
+ S++KK RVVWS ELH +FV+AVNQ+G D KA PK+IL+LMNVP LTRENVAS
Sbjct: 181 QDESDPSSSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVAS 240
Query: 264 HLQEINLQKFRLYLKRLNGVSQ----QGGITNSFCAP--IETNVKLGSLGR 308
H LQK+RLYL RL + GG+ N+ +P +E N S GR
Sbjct: 241 H-----LQKYRLYLSRLEKGKELKCYSGGVKNADSSPKDVEVNSGYQSPGR 286
>gi|297798770|ref|XP_002867269.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313105|gb|EFH43528.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 146/270 (54%), Positives = 185/270 (68%), Gaps = 34/270 (12%)
Query: 23 DVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDV 82
++ V DQFP G+RVL VDDD TCLRIL+ +L RC Y+VTT +QA AL++LRE K FD+
Sbjct: 6 EIEVLDQFPVGMRVLAVDDDQTCLRILQTLLHRCQYHVTTTNQAQTALELLRENKNKFDL 65
Query: 83 VLSDVHMPDMDGFKLLEHIGLEMDLPVITDGRVS---AVMRGIRHGACDYLIKPIREEEL 139
V+SDV MPDMDGFKLLE +GLEMDLPVI S VM+G++HGACDYL+KP+R EEL
Sbjct: 66 VISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEEL 125
Query: 140 KNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISA 199
KNIWQHVVRK S + SSV+ G + KA RKR
Sbjct: 126 KNIWQHVVRK-----------------------SKLKKNKSSVSNGAANSDKANRKRKEQ 162
Query: 200 KEEDDGEL---ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGL 256
EE++ E E+DDP+ KKPRV+W+ ELH +F++AV+ LG++KAVPK+IL+LMNV L
Sbjct: 163 YEEEEEEERGNENDDPTAQKKPRVLWTHELHNKFLAAVDHLGVEKAVPKKILDLMNVDKL 222
Query: 257 TRENVASHLQEINLQKFRLYLKRLNGVSQQ 286
TRENVASH LQKFR+ LK+++ + Q
Sbjct: 223 TRENVASH-----LQKFRVALKKMSDKANQ 247
>gi|312283507|dbj|BAJ34619.1| unnamed protein product [Thellungiella halophila]
Length = 539
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 141/267 (52%), Positives = 183/267 (68%), Gaps = 24/267 (8%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCLRILE +L RC Y+VTT QA AL +LRE K FD+V+SDV
Sbjct: 8 DQFPVGMRVLAVDDDQTCLRILETLLHRCQYHVTTTDQAQTALKLLRENKNKFDLVISDV 67
Query: 88 HMPDMDGFKLLEHIGLEMDLPVITDGRVS---AVMRGIRHGACDYLIKPIREEELKNIWQ 144
MPDMDGFKLLE +GLEMDLPVI S VM+G++HGACDYL+KP+R EELKNIWQ
Sbjct: 68 DMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQ 127
Query: 145 HVVRK-RWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEED 203
HVVRK ++ + K ++G E +S G + K + + +E++
Sbjct: 128 HVVRKGKFKKMKSSLSNGESE--------------GNSDQNGVKANRKRKDQFEEEEEDE 173
Query: 204 DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 263
+ +E+DDP+ KKPRV+W+ ELH + ++AV+ LG++KAVPK+IL+LMNV LTRENVAS
Sbjct: 174 ERGIENDDPTAQKKPRVLWTRELHNKSLAAVDHLGVEKAVPKKILDLMNVEKLTRENVAS 233
Query: 264 HLQEINLQKFRLYLKRL-NGVSQQGGI 289
H LQKFR LK++ N +QQ +
Sbjct: 234 H-----LQKFRSALKKITNETNQQANM 255
>gi|356528234|ref|XP_003532710.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR11-like [Glycine max]
Length = 581
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/265 (53%), Positives = 177/265 (66%), Gaps = 18/265 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLY-NVTTCSQAAVALDILRERKGCFDVVLSD 86
D FPAGLRVLVVDD + + L LY +VTTC A AL LRERK +D+V+SD
Sbjct: 13 DAFPAGLRVLVVDDXANIISLSNSFL---LYASVTTCCLATEALKKLRERKEAYDIVISD 69
Query: 87 VHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIW 143
V+MPDMDGFKLLE +GLEMDLPVI DG S VM+G++HGACDYL+KPIR +EL+NIW
Sbjct: 70 VNMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIW 129
Query: 144 QHVVRKRWNENKEHENSGSLEETDHH--KRGSDEIEYASSVNEGTEGTFKAQRKRISAKE 201
QHV RKR +E ++ E+ + H + GSD + + E T ++++ + +
Sbjct: 130 QHVFRKRMHEARDFESHEGFDFEGIHLMRNGSDHSDDGNLF--AVEETTSIKKRKDADNK 187
Query: 202 EDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENV 261
DD E P TKK RVVWSV+LHQ+FV AVNQ+G DK PK+IL+LMNVP LTRENV
Sbjct: 188 HDDKEFGDHFP--TKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENV 245
Query: 262 ASHLQEINLQKFRLYLKRLNGVSQQ 286
ASH LQK+RLYL RL + Q
Sbjct: 246 ASH-----LQKYRLYLSRLQKENDQ 265
>gi|15236580|ref|NP_194920.1| two-component response regulator ARR10 [Arabidopsis thaliana]
gi|38257358|sp|O49397.1|ARR10_ARATH RecName: Full=Two-component response regulator ARR10; AltName:
Full=Receiver-like protein 4
gi|2827643|emb|CAA16597.1| predicted protein [Arabidopsis thaliana]
gi|3549641|emb|CAA06432.1| receiver-like protein 4 [Arabidopsis thaliana]
gi|7270096|emb|CAB79910.1| predicted protein [Arabidopsis thaliana]
gi|27808620|gb|AAO24590.1| At4g31920 [Arabidopsis thaliana]
gi|110736270|dbj|BAF00105.1| predicted protein [Arabidopsis thaliana]
gi|332660579|gb|AEE85979.1| two-component response regulator ARR10 [Arabidopsis thaliana]
Length = 552
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 142/264 (53%), Positives = 183/264 (69%), Gaps = 34/264 (12%)
Query: 23 DVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDV 82
++ V DQFP G+RVL VDDD TCLRIL+ +L+RC Y+VTT +QA AL++LRE K FD+
Sbjct: 6 EIEVLDQFPVGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDL 65
Query: 83 VLSDVHMPDMDGFKLLEHIGLEMDLPVITDGRVS---AVMRGIRHGACDYLIKPIREEEL 139
V+SDV MPDMDGFKLLE +GLEMDLPVI S VM+G++HGACDYL+KP+R EEL
Sbjct: 66 VISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEEL 125
Query: 140 KNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISA 199
KNIWQHVVRK S + S+V+ G+ KA RKR
Sbjct: 126 KNIWQHVVRK-----------------------SKLKKNKSNVSNGSGNCDKANRKRKEQ 162
Query: 200 KEEDDGEL---ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGL 256
EE++ E ++DDP+ KKPRV+W+ ELH +F++AV+ LG+++AVPK+IL+LMNV L
Sbjct: 163 YEEEEEEERGNDNDDPTAQKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKL 222
Query: 257 TRENVASHLQEINLQKFRLYLKRL 280
TRENVASH LQKFR+ LK++
Sbjct: 223 TRENVASH-----LQKFRVALKKV 241
>gi|307107757|gb|EFN55999.1| hypothetical protein CHLNCDRAFT_30989, partial [Chlorella
variabilis]
Length = 334
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 139/264 (52%), Positives = 175/264 (66%), Gaps = 33/264 (12%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGC---FDVVLSDV 87
P+GL+VLVVDDD CL+++ ML+RC Y V T + AL +LR+R+ FD+VLSDV
Sbjct: 31 PSGLKVLVVDDDPMCLKVVSAMLQRCNYEVDTRTSGQDALLLLRDRQEHNHQFDLVLSDV 90
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
+MPDMDGFKLLEHIGLE+DLPVI ++G V+RG+ HGA D+LIKP+R EEL+N+WQ
Sbjct: 91 YMPDMDGFKLLEHIGLELDLPVIMMSSNGDTDVVLRGVTHGAVDFLIKPVRVEELRNVWQ 150
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HVVR+R + H R SDE + G + + KE +
Sbjct: 151 HVVRRR---------------SLHVGRASDE-------HSGLDLEQHQHHHGVKRKEVEA 188
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
+++ + KKPRVVWSVE+HQQFV AVNQLG+DKAVPKRIL+LMNV GLTRENVASH
Sbjct: 189 LQVQHETQGANKKPRVVWSVEMHQQFVDAVNQLGVDKAVPKRILDLMNVEGLTRENVASH 248
Query: 265 LQEINLQKFRLYLKRLNGVSQQGG 288
LQK+RLYLKR G+ G
Sbjct: 249 -----LQKYRLYLKRAQGLQSGKG 267
>gi|356546098|ref|XP_003541468.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 680
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/271 (51%), Positives = 183/271 (67%), Gaps = 20/271 (7%)
Query: 24 VAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVV 83
+ V D+FP G+RVL VDDD TCL +LE +LR+C YNVTT +QA AL++LR+ + FD+V
Sbjct: 1 MVVGDRFPVGMRVLAVDDDKTCLTVLENLLRKCQYNVTTTNQAIKALEMLRKNRNKFDLV 60
Query: 84 LSDVHMPDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELK 140
+SDV+MPDMDGFKLLE +GLEMDLPVI G VMRG+ GACDYL KP+R EEL+
Sbjct: 61 ISDVNMPDMDGFKLLELVGLEMDLPVIMLSGYGDKERVMRGVIQGACDYLTKPVRIEELQ 120
Query: 141 NIWQHVVRKRWN---------ENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFK 191
NIWQHV+R+R + E K +G + + + E A + T+ K
Sbjct: 121 NIWQHVLRRRIDSKDKNKTASEGKGCSMAGKFANEEKARYMAGECSQAMAPKNNTDQNIK 180
Query: 192 AQRKR---ISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRIL 248
+KR +EE++ + E+++ S KKPR+VW ELH++F++AVN LGIDKA PKRIL
Sbjct: 181 LGQKRKELSEDEEEEEYDKENEEHSNQKKPRLVWDAELHRKFLAAVNHLGIDKAFPKRIL 240
Query: 249 ELMNVPGLTRENVASHLQEINLQKFRLYLKR 279
+LMNV GLTRENVASH LQK+RL L++
Sbjct: 241 DLMNVEGLTRENVASH-----LQKYRLGLRK 266
>gi|242085174|ref|XP_002443012.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
gi|241943705|gb|EES16850.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
Length = 551
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/258 (51%), Positives = 175/258 (67%), Gaps = 16/258 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERK--GCFDVVLS 85
D FPAGLRVL VDDD CL+ILE+ L+ C YN T S A ALD+LRERK FD+V+S
Sbjct: 4 DTFPAGLRVLAVDDDRVCLKILERQLKYCNYNATVVSDARTALDMLRERKEGNQFDLVIS 63
Query: 86 DVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNI 142
DV MP+MDGFKLLE IGLEMDLPVI + +M+GI+HGACDY++KP+R E+L+ I
Sbjct: 64 DVIMPNMDGFKLLELIGLEMDLPVIMLSANSETQTIMKGIKHGACDYMVKPVRLEQLRGI 123
Query: 143 WQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEE 202
W HVV+ N+ + + NSGS ++ + G+ + N + + K +K + +E
Sbjct: 124 WTHVVKNSMNDPQNNINSGSDDDVQKLRYGNGDKGMKDGANHRNKYS-KKNKKVVDVADE 182
Query: 203 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 262
D S++ S KK RV W +LHQ+FV AV+Q+GID+A PK+IL +MNV GLTRENVA
Sbjct: 183 D-----SENTSAQKKQRVQWCGQLHQKFVEAVSQIGIDRAAPKKILAIMNVEGLTRENVA 237
Query: 263 SHLQEINLQKFRLYLKRL 280
SH LQK+R+YL++L
Sbjct: 238 SH-----LQKYRIYLRKL 250
>gi|302815333|ref|XP_002989348.1| hypothetical protein SELMODRAFT_447635 [Selaginella moellendorffii]
gi|300142926|gb|EFJ09622.1| hypothetical protein SELMODRAFT_447635 [Selaginella moellendorffii]
Length = 470
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 151/270 (55%), Positives = 186/270 (68%), Gaps = 26/270 (9%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP G+RVLVVDDD CL +L++ML +C Y+VT CS+A AL +LRE+K FD+V+SDV+M
Sbjct: 11 FPIGMRVLVVDDDPLCLLLLKKMLLQCKYHVTACSRAVEALQLLREKKFQFDLVISDVYM 70
Query: 90 PDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
PDMDGFKLLE IGLEMDLPVI +G S VM GI HGACDYL+KP+R EEL+NIWQHV
Sbjct: 71 PDMDGFKLLELIGLEMDLPVIMMSGNGETSVVMEGITHGACDYLLKPVRIEELRNIWQHV 130
Query: 147 VRKRW-NENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDG 205
VRKR E + E+SG E+ S + E T K ++++ + D
Sbjct: 131 VRKRGAREAAKEESSG---------------EWDDSSEKFPEYTSKKRKEKDADSSGGDE 175
Query: 206 ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHL 265
++E D S KK RVVWS +LH+ FV AVNQLG++KAVPKRILE+MNV GLTRENVASH
Sbjct: 176 QIE--DISGLKKARVVWSGDLHRLFVKAVNQLGVEKAVPKRILEIMNVQGLTRENVASH- 232
Query: 266 QEINLQKFRLYLKRLNGVSQQGGITNSFCA 295
LQK+RL LKRL+GV + SF A
Sbjct: 233 ----LQKYRLGLKRLSGVDMEPHPIASFQA 258
>gi|449443269|ref|XP_004139402.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
gi|449494037|ref|XP_004159429.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 699
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/305 (46%), Positives = 187/305 (61%), Gaps = 13/305 (4%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
+QFP G+RVL VDDD CL++LE +LR+C Y+VTT +QA AL +LRE K FD+V+SDV
Sbjct: 18 EQFPIGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVQALKMLRENKNRFDLVISDV 77
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
+MPDMDGFKLLE +GLEMDLPVI V +G+ HGACDYL+KP+R EELKNIWQ
Sbjct: 78 NMPDMDGFKLLELVGLEMDLPVIMLSAHSNTELVKKGVLHGACDYLLKPVRIEELKNIWQ 137
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HV+R++ K S T + A S + G + + E+D
Sbjct: 138 HVLRRKKPSVKNQNKSIIGNNTSQSVEVAKGCPPAVSTDNEKSGKRQKDQDDDEEGGEED 197
Query: 205 GELESDDPSTTKKPRVVW---SVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENV 261
E+DD ST KKPRV W LH++FV+AVN LG +KAVPK+IL+LMNV GLTRENV
Sbjct: 198 STYENDDSSTQKKPRVNWYDGDENLHRKFVAAVNILGYEKAVPKKILDLMNVEGLTRENV 257
Query: 262 ASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIP 321
ASH LQK+R YLK+L S++ N A T+ + D ++ +G++
Sbjct: 258 ASH-----LQKYRQYLKKL--CSEESEQCNKMGAFGGTHTSFRPMASLDGFSMTGTGRLS 310
Query: 322 PQTLA 326
T +
Sbjct: 311 NATFS 315
>gi|302798186|ref|XP_002980853.1| type B response regulator [Selaginella moellendorffii]
gi|300151392|gb|EFJ18038.1| type B response regulator [Selaginella moellendorffii]
Length = 470
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 150/270 (55%), Positives = 184/270 (68%), Gaps = 26/270 (9%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP G+RVLVVDDD CL +L++ML +C Y+VT CS+A AL +LRE+K FD+V+SDV+M
Sbjct: 11 FPIGMRVLVVDDDPLCLLLLKKMLLQCKYHVTACSRAVEALQLLREKKFQFDLVISDVYM 70
Query: 90 PDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
PDMDGFKLLE IGLEMDLPVI +G S VM GI HGACDYL+KP+R EEL+NIWQHV
Sbjct: 71 PDMDGFKLLELIGLEMDLPVIMMSGNGETSVVMEGITHGACDYLLKPVRIEELRNIWQHV 130
Query: 147 VRKRW-NENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDG 205
VRKR E + E+SG E+ S + E T K ++ + + D
Sbjct: 131 VRKRGAKEAAKEESSG---------------EWDDSSEKFPEYTSKKRKDKDADSSGGDD 175
Query: 206 ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHL 265
+E D S KK RVVWS +LH+ FV AVNQLG++KAVPKRILE+M+V GLTRENVASH
Sbjct: 176 PIE--DMSGLKKARVVWSGDLHRLFVKAVNQLGVEKAVPKRILEIMSVQGLTRENVASH- 232
Query: 266 QEINLQKFRLYLKRLNGVSQQGGITNSFCA 295
LQK+RL LKRL+GV + SF A
Sbjct: 233 ----LQKYRLGLKRLSGVDMEPHPIASFQA 258
>gi|224141943|ref|XP_002324320.1| type-b response regulator [Populus trichocarpa]
gi|222865754|gb|EEF02885.1| type-b response regulator [Populus trichocarpa]
Length = 661
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 184/451 (40%), Positives = 259/451 (57%), Gaps = 46/451 (10%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL +LE +LRRC YNVTT SQA AL +LRE K FD+V+SDV
Sbjct: 13 DQFPIGMRVLAVDDDPTCLLLLETLLRRCQYNVTTTSQAITALRMLRENKNKFDLVISDV 72
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI +G VM+GI HGAC YL+KP+R EELK IWQ
Sbjct: 73 HMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACYYLLKPVRIEELKTIWQ 132
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HV+R++ ++NK+ +S + D +GS E +N+ + +ED+
Sbjct: 133 HVIRRKKSDNKDRNSS---DNRDKPNQGSSEAVPDQKLNKKRK---DQNGDEDEDHDEDE 186
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
E E++DP+T KKPRVVWSVELH++FV+AVNQLG+DKAVPK+IL+LMNV LTREN
Sbjct: 187 DEHENEDPTTQKKPRVVWSVELHRKFVAAVNQLGVDKAVPKKILDLMNVEKLTREN---- 242
Query: 265 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQ 323
K+R YLKR++ V+ QQ + + + + +++ S+ + +LA S Q
Sbjct: 243 -------KYRHYLKRISTVANQQANMVAALGSSDASYLQMNSMSVLGLHSLAGSVQFHST 295
Query: 324 TLAALHA----ELLGRPTGNLVTAVDQPALLQ--------ATLQGPKCI-PADH------ 364
+L + + L P + + P ++Q T G P H
Sbjct: 296 PFRSLQSSGMLDRLNSPAVLGIHGLPSPGVIQLGHVQTAPHTANGLSHFQPVGHRGNNGN 355
Query: 365 ---GVAFGQQLVKCQSNVPEN-LPQSIISVDDASTGFGVWASNSLGAVASTSNLGGLNPQ 420
G+ +L + QSN N +P+ +DD ++ S + +A +SN +
Sbjct: 356 ILQGMPMPLELDQIQSNKGVNYIPELPTHLDDTASFPVSSGSTDMKIIAGSSNSPFVGVS 415
Query: 421 NGNMLMDILHQQQQKQQNQQSQQQSTLSETS 451
N +++++ Q Q Q+S +QS+LS S
Sbjct: 416 NKHLMLE--GHGQGLQDGQKSGKQSSLSAGS 444
>gi|242070155|ref|XP_002450354.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
gi|241936197|gb|EES09342.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
Length = 694
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/280 (49%), Positives = 180/280 (64%), Gaps = 20/280 (7%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGC--FDVVLS 85
D FPAGLRVL VDDD CL+ILE+ L+ C YN T + A ALD+LRERK FD+V+S
Sbjct: 4 DTFPAGLRVLAVDDDRVCLKILERQLKYCNYNATVVTDARTALDMLRERKDGNQFDLVIS 63
Query: 86 DVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNI 142
DV MP+MDGFKLLE IGLEMDLPVI + +M+GI+HGACDY++KP+R E+L+ I
Sbjct: 64 DVVMPNMDGFKLLELIGLEMDLPVIMLSANNETQTIMKGIKHGACDYIVKPVRLEQLRGI 123
Query: 143 WQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEE 202
W HVV+ + + +SG+ ++ G E S + E +RK+ S K +
Sbjct: 124 WTHVVKNGKTDPRNTISSGNDDDVQKLPSGD---ELPSGDADKDENIAANRRKKYSKKNK 180
Query: 203 DDGELESDDPSTT---KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 259
E+ +D T KK RV W +LH++FV AV+Q+GID AVPK+IL++MNV GLTRE
Sbjct: 181 RIVEVADEDNENTSAQKKQRVRWCGQLHRKFVEAVSQIGIDSAVPKKILKIMNVEGLTRE 240
Query: 260 NVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIET 299
NVASH LQK+R+YLK+L G +TNS ET
Sbjct: 241 NVASH-----LQKYRIYLKKLG----DGTLTNSNSFADET 271
>gi|224089346|ref|XP_002308698.1| type-b response regulator [Populus trichocarpa]
gi|222854674|gb|EEE92221.1| type-b response regulator [Populus trichocarpa]
Length = 588
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 155/327 (47%), Positives = 208/327 (63%), Gaps = 35/327 (10%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL +LE +LRRC Y VTT SQA AL +LRE K FD+V+SDV
Sbjct: 13 DQFPIGMRVLAVDDDPTCLLLLETLLRRCQYTVTTTSQAITALSMLRENKNKFDLVISDV 72
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDGFKLLE +GLEMDLPVI +G VM+GI HGACDYL+KP+R EELKNIWQ
Sbjct: 73 HMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQ 132
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HV+R+R +NK+ +S + D +GS E +N+ + + + + E
Sbjct: 133 HVIRRRKYDNKDRNSS---DNRDKPNQGSSEAIPDQKLNKKRKDQNEDEDEDRDENEH-- 187
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
E++DP+T KKPRV LH++FV+AVNQLGIDKAVPK+IL+LMNV LTREN
Sbjct: 188 ---ENEDPATQKKPRV-----LHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTREN---- 235
Query: 265 LQEINLQKFRLYLKRLNGVS-QQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQ 323
K+RLYLKR++ V+ QQ + + + + +++ S+ + LA SGQ
Sbjct: 236 -------KYRLYLKRISTVANQQANMVAALGSSDASYLQMNSMNGMGLHNLAGSGQFHNT 288
Query: 324 TLAALHAELLGRPTGNLVTAVDQPALL 350
+L P+ +++ ++ PA+L
Sbjct: 289 PFRSL-------PSSGMLSRLNSPAVL 308
>gi|159485404|ref|XP_001700734.1| hypothetical protein CHLREDRAFT_113139 [Chlamydomonas reinhardtii]
gi|158281233|gb|EDP06988.1| predicted protein, partial [Chlamydomonas reinhardtii]
Length = 235
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 133/241 (55%), Positives = 168/241 (69%), Gaps = 9/241 (3%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FPAGLR+LVVDDD CL+++EQMLR+C Y VT CS A AL+ILR++ +D+VLSDV+M
Sbjct: 1 FPAGLRLLVVDDDPLCLKVVEQMLRKCSYEVTVCSNATTALNILRDKNTEYDLVLSDVYM 60
Query: 90 PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
PDMDGF+LLE +GLEMDLPVI ++G S V+RG+ HGACDYLIKP+R EEL+N+WQHV
Sbjct: 61 PDMDGFRLLELVGLEMDLPVIMMSSNGDTSNVLRGVTHGACDYLIKPVRLEELRNLWQHV 120
Query: 147 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 206
VR+ ++ + +G E G + + QR+R +
Sbjct: 121 VRR--RRQRKADAAGQRERRVGPLGGGACVRRVNRAQPSKLNQGHVQRERGRGRVGKAPL 178
Query: 207 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
L + KK RVVWSVE+HQQFV+AVNQLGIDKAVPK+ILE+M V GLTRENVASHLQ
Sbjct: 179 LN----GSNKKARVVWSVEMHQQFVNAVNQLGIDKAVPKKILEIMGVDGLTRENVASHLQ 234
Query: 267 E 267
+
Sbjct: 235 K 235
>gi|302852985|ref|XP_002958010.1| ARR-B family transcription factor [Volvox carteri f. nagariensis]
gi|300256682|gb|EFJ40943.1| ARR-B family transcription factor [Volvox carteri f. nagariensis]
Length = 254
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/243 (56%), Positives = 172/243 (70%), Gaps = 18/243 (7%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSD--- 86
FPAGLR+LVVDDD CL+++EQMLR+C Y+VTTC+ A +AL++LR++ +D+VLSD
Sbjct: 24 FPAGLRLLVVDDDPLCLKVVEQMLRKCSYDVTTCTNATMALNLLRDKSTEYDLVLSDSFL 83
Query: 87 VHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIW 143
V DMDGFKLLE +GLEMDLPVI ++G S V+RG+ HGACDYLIKP+R EEL+N+W
Sbjct: 84 VSSSDMDGFKLLEVVGLEMDLPVIMMSSNGDTSNVLRGVTHGACDYLIKPVRLEELRNLW 143
Query: 144 QHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEED 203
QHVVR+R +G G++ + S+ N G T A D
Sbjct: 144 QHVVRRR--RQLRMMGAGC-------SGGANGL--GSTGNLGAVATGSAGLGLGLGTAAD 192
Query: 204 DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 263
+ L D+ S +KK RVVWSVE+HQQFV+AVNQLGIDKAVPK+ILE+MNV GLTRENVAS
Sbjct: 193 ELGLGLDNGS-SKKARVVWSVEMHQQFVNAVNQLGIDKAVPKKILEIMNVDGLTRENVAS 251
Query: 264 HLQ 266
HLQ
Sbjct: 252 HLQ 254
>gi|118790775|tpd|FAA00258.1| TPA: response regulator [Oryza sativa Japonica Group]
Length = 690
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/269 (49%), Positives = 171/269 (63%), Gaps = 37/269 (13%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+FP GLRVL VDD CL +LE +LRRC Y T AA AL +LRER G FD+V+SDVH
Sbjct: 11 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 70
Query: 89 MPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
M DMDGFKLLE IGLEMDLPVI +G + +M+G+ HGACDYL+KP+ ++++NIWQH
Sbjct: 71 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 130
Query: 146 VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTE--GTFKAQRKRISAKEED 203
V RKR + + H N G N+G E G + +RK D
Sbjct: 131 VWRKRKLDIRNH-NGG--------------------YNDGGELVGATRTKRKYTRKMRND 169
Query: 204 D---GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTREN 260
GE + + ST K+ RVVW+ ELH+ FV AV++LG+D+AVP++IL +M V +TREN
Sbjct: 170 GDNYGENKENMDSTLKRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTREN 229
Query: 261 VASHLQEINLQKFRLYLKRLNGVSQQGGI 289
+ASH LQK+RLYLKR +S Q G+
Sbjct: 230 IASH-----LQKYRLYLKR---ISTQTGM 250
>gi|297606271|ref|NP_001058204.2| Os06g0647200 [Oryza sativa Japonica Group]
gi|255677276|dbj|BAF20118.2| Os06g0647200 [Oryza sativa Japonica Group]
Length = 663
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/289 (47%), Positives = 180/289 (62%), Gaps = 38/289 (13%)
Query: 10 SSGGSGYGSSRAADVAVP-DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAV 68
S+ G G++ AA A +FP GLRVL VDD CL +LE +LRRC Y T AA
Sbjct: 6 STHGGIQGTNMAATQATAARKFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAAT 65
Query: 69 ALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHG 125
AL +LRER G FD+V+SDVHM DMDGFKLLE IGLEMDLPVI +G + +M+G+ HG
Sbjct: 66 ALRMLRERPGDFDLVISDVHMLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHG 125
Query: 126 ACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEG 185
ACDYL+KP+ ++++NIWQHV RKR + + H N G N+G
Sbjct: 126 ACDYLVKPVSLKDIQNIWQHVWRKRKLDIRNH-NGG--------------------YNDG 164
Query: 186 TE--GTFKAQRKRISAKEEDD---GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGID 240
E G + +RK D GE + + ST K+ RVVW+ ELH+ FV AV++LG+D
Sbjct: 165 GELVGATRTKRKYTRKMRNDGDNYGENKENMDSTLKRQRVVWTPELHRDFVIAVHELGVD 224
Query: 241 KAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGI 289
+AVP++IL +M V +TREN+ASH LQK+RLYLKR +S Q G+
Sbjct: 225 RAVPRKILRMMKVDYMTRENIASH-----LQKYRLYLKR---ISTQTGM 265
>gi|125556273|gb|EAZ01879.1| hypothetical protein OsI_23901 [Oryza sativa Indica Group]
Length = 684
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/269 (49%), Positives = 171/269 (63%), Gaps = 37/269 (13%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+FP GLRVL VDD CL +LE +LRRC Y T AA AL +LRER G FD+V+SDVH
Sbjct: 11 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 70
Query: 89 MPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
M DMDGFKLLE IGLEMDLPVI +G + +M+G+ HGACDYL+KP+ ++++NIWQH
Sbjct: 71 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 130
Query: 146 VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTE--GTFKAQRKRISAKEED 203
V RKR + + H N G N+G E G + +RK D
Sbjct: 131 VWRKRKLDIRNH-NGG--------------------YNDGGELVGATRTKRKYTRKMRND 169
Query: 204 D---GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTREN 260
GE + + ST K+ RVVW+ ELH+ FV AV++LG+D+AVP++IL +M V +TREN
Sbjct: 170 GDNYGENKENMDSTLKRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTREN 229
Query: 261 VASHLQEINLQKFRLYLKRLNGVSQQGGI 289
+ASH LQK+RLYLKR +S Q G+
Sbjct: 230 IASH-----LQKYRLYLKR---ISTQTGM 250
>gi|125598040|gb|EAZ37820.1| hypothetical protein OsJ_22159 [Oryza sativa Japonica Group]
Length = 713
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/269 (49%), Positives = 171/269 (63%), Gaps = 37/269 (13%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+FP GLRVL VDD CL +LE +LRRC Y T AA AL +LRER G FD+V+SDVH
Sbjct: 11 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 70
Query: 89 MPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
M DMDGFKLLE IGLEMDLPVI +G + +M+G+ HGACDYL+KP+ ++++NIWQH
Sbjct: 71 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 130
Query: 146 VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTE--GTFKAQRKRISAKEED 203
V RKR + + H N G N+G E G + +RK D
Sbjct: 131 VWRKRKLDIRNH-NGG--------------------YNDGGELVGATRTKRKYTRKMRND 169
Query: 204 D---GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTREN 260
GE + + ST K+ RVVW+ ELH+ FV AV++LG+D+AVP++IL +M V +TREN
Sbjct: 170 GDNYGENKENMDSTLKRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTREN 229
Query: 261 VASHLQEINLQKFRLYLKRLNGVSQQGGI 289
+ASH LQK+RLYLKR +S Q G+
Sbjct: 230 IASH-----LQKYRLYLKR---ISTQTGM 250
>gi|51535423|dbj|BAD37322.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|51535645|dbj|BAD37619.1| putative response regulator 9 [Oryza sativa Japonica Group]
Length = 694
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 132/269 (49%), Positives = 171/269 (63%), Gaps = 37/269 (13%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+FP GLRVL VDD CL +LE +LRRC Y T AA AL +LRER G FD+V+SDVH
Sbjct: 11 KFPEGLRVLAVDDSPVCLMLLEALLRRCKYQPTMTRDAATALRMLRERPGDFDLVISDVH 70
Query: 89 MPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
M DMDGFKLLE IGLEMDLPVI +G + +M+G+ HGACDYL+KP+ ++++NIWQH
Sbjct: 71 MLDMDGFKLLELIGLEMDLPVIMQSANGELETMMKGVTHGACDYLVKPVSLKDIQNIWQH 130
Query: 146 VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTE--GTFKAQRKRISAKEED 203
V RKR + + H N G N+G E G + +RK D
Sbjct: 131 VWRKRKLDIRNH-NGG--------------------YNDGGELVGATRTKRKYTRKMRND 169
Query: 204 D---GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTREN 260
GE + + ST K+ RVVW+ ELH+ FV AV++LG+D+AVP++IL +M V +TREN
Sbjct: 170 GDNYGENKENMDSTLKRQRVVWTPELHRDFVIAVHELGVDRAVPRKILRMMKVDYMTREN 229
Query: 261 VASHLQEINLQKFRLYLKRLNGVSQQGGI 289
+ASH LQK+RLYLKR +S Q G+
Sbjct: 230 IASH-----LQKYRLYLKR---ISTQTGM 250
>gi|297733625|emb|CBI14872.3| unnamed protein product [Vitis vinifera]
Length = 468
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/252 (51%), Positives = 173/252 (68%), Gaps = 23/252 (9%)
Query: 52 MLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI- 110
ML++C Y +TTC A AL +L+ERK FD+++SDV+MPDMDGF+LLEH+ +EMDLPVI
Sbjct: 1 MLKKCSYEMTTCCVARDALSMLQERKNSFDIIISDVNMPDMDGFQLLEHLEVEMDLPVIL 60
Query: 111 --TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 168
DG ++ VM+G++ GACDYL+KP+R EELKNIWQHV+RK+ +E K + S
Sbjct: 61 ISVDGEMNRVMKGVQSGACDYLLKPVRMEELKNIWQHVLRKKIHEGKNSQVMIS------ 114
Query: 169 HKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQ 228
R S+E++ +N G E + +RK + + DD + S +PST+KK RVVWS++LHQ
Sbjct: 115 --RSSNELDDGQQLN-GGEVSATRKRKDMENRRHDDQK--SVEPSTSKKARVVWSIDLHQ 169
Query: 229 QFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRL---NGV-S 284
+FV V Q+G DKA PK+IL+LMNVP LTRENVASH LQK+R YL +L N V S
Sbjct: 170 KFVDVVTQIGYDKARPKKILDLMNVPWLTRENVASH-----LQKYRFYLSKLRKENKVKS 224
Query: 285 QQGGITNSFCAP 296
QG + F P
Sbjct: 225 SQGMMQQDFTRP 236
>gi|147805870|emb|CAN64871.1| hypothetical protein VITISV_039966 [Vitis vinifera]
Length = 570
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 145/305 (47%), Positives = 188/305 (61%), Gaps = 53/305 (17%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRR--------C-------LYNVTTCSQAAVALDI 72
D FPAGLRVL VDDD L+IL + R+ C L VTTC A AL +
Sbjct: 8 DAFPAGLRVLAVDDDPAWLKILLIIFRKKLNFAGVICRMFPKLYLARVTTCCVARDALSM 67
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDY 129
L+ERK FD+++SDV+MPDMDGF+LLEH+ +EMDLPVI DG ++ VM+GI+ GACDY
Sbjct: 68 LQERKNSFDIIISDVNMPDMDGFQLLEHLEVEMDLPVILISVDGEMNRVMKGIQSGACDY 127
Query: 130 LIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGT 189
L+KP+R EELKNIWQHV+RK+ +E K + S R S+E++ +N G E +
Sbjct: 128 LLKPVRMEELKNIWQHVLRKKIHEGKNSQVMIS--------RSSNELDDGQQLN-GGEVS 178
Query: 190 FKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDK-------- 241
+RK + + DD +S +PST+KK RVVWS++LHQ+FV V Q+G D+
Sbjct: 179 ATRKRKDMENRRHDDQ--KSVEPSTSKKARVVWSIDLHQKFVDVVTQIGYDRFCIDGVLM 236
Query: 242 ------AVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRL---NGV-SQQGGITN 291
A PK+IL+LMNVP LTRENVASHLQ +R YL +L N V S QG +
Sbjct: 237 VIHLTEARPKKILDLMNVPWLTRENVASHLQ------YRFYLSKLRKENEVKSSQGMMQQ 290
Query: 292 SFCAP 296
F P
Sbjct: 291 DFTRP 295
>gi|357480193|ref|XP_003610382.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355511437|gb|AES92579.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 633
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/254 (51%), Positives = 177/254 (69%), Gaps = 17/254 (6%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP G+RVL VDDD T L++LE+ L C YNVTT +++ AL++LRE++ FD+++SDV+M
Sbjct: 17 FPVGMRVLAVDDDQTSLKVLEKHLLTCKYNVTTTTKSVEALELLREKRSMFDLIISDVNM 76
Query: 90 PDMDGFKLLEHIGLEMDLPVIT----DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
P+MDGFKLLE +GLEMDLP I D R VM+G+ GACDYL+KPIR EELKNIWQH
Sbjct: 77 PEMDGFKLLEQVGLEMDLPFIMLSGHDDR-ERVMKGVMKGACDYLVKPIRLEELKNIWQH 135
Query: 146 VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDG 205
VVRK+ E+K+ +N G + + + S E ++ + + + ++++ +E D
Sbjct: 136 VVRKKI-ESKD-QNQGIISDGVSGQDTSSE-----NIPKKNKTHGRKRKEQSEEEEADTD 188
Query: 206 ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHL 265
E ++ ST KKPR VW ELH++FVS VN LG+DKA PK+I +LMNV GLTRENVASH
Sbjct: 189 EENDEEHSTRKKPRFVWDNELHKKFVSIVNLLGLDKAYPKKIRDLMNVEGLTRENVASH- 247
Query: 266 QEINLQKFRLYLKR 279
LQK+RL LKR
Sbjct: 248 ----LQKYRLSLKR 257
>gi|9759533|dbj|BAB10999.1| unnamed protein product [Arabidopsis thaliana]
Length = 632
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 143/294 (48%), Positives = 188/294 (63%), Gaps = 17/294 (5%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDD+ TCLR LE++L RC Y+VT ++ AL++LRE FD+V+SDV
Sbjct: 12 DKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVITDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
MPD DGFKLLE IGLEMDLPVIT +VM+GI HGACDYL+KP+ +EL+NIW HVV
Sbjct: 72 EMPDTDGFKLLE-IGLEMDLPVITHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVV 130
Query: 148 RKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGEL 207
+K K + E+D S + + VN+ + + + E DG
Sbjct: 131 KKNI---KSYAKLLPPSESDSVPSASRKRK--DKVNDSGDEDDSDREEDDGEGSEQDG-- 183
Query: 208 ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQE 267
D T KKPRVVWS ELHQ+FVSAV QLG+DKAVPK+IL+LM++ GLTRENVASH
Sbjct: 184 --DGSGTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASH--- 238
Query: 268 INLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIP 321
LQK+RLYLK+++ QQ ++F + ++ L ++ A+ QIP
Sbjct: 239 --LQKYRLYLKKIDEGQQQNMTPDAFGTRDSSYFQMAQLD--GLRDFTAARQIP 288
>gi|90658417|gb|ABD97105.1| SRR392 [Striga asiatica]
Length = 453
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 149/270 (55%), Positives = 185/270 (68%), Gaps = 27/270 (10%)
Query: 89 MPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
MPDMDGFKLLEH+GLEMDLPVI D + VM+G+ HGACDYLIKP+R E LKNIWQH
Sbjct: 1 MPDMDGFKLLEHVGLEMDLPVIMMSADDSKNVVMKGVTHGACDYLIKPVRMEALKNIWQH 60
Query: 146 VVRKRWNENKEHE--NSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEED 203
VVRK+ E KE E SGS+E+ + + D ++Y+SS NEG +K+ ++R +E +
Sbjct: 61 VVRKKKYEWKEKEQEQSGSVEDGERQPKQED-VDYSSSANEGN--NWKSSKRRKEDEEGE 117
Query: 204 DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 263
D E S T KKPRVVWSVELHQQFV+AVNQLGIDKAVPK+ILELM+VPGL+RENVAS
Sbjct: 118 DKEDTS----TLKKPRVVWSVELHQQFVTAVNQLGIDKAVPKKILELMSVPGLSRENVAS 173
Query: 264 HLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQAL----AASGQ 319
H LQK+RLYLKRL+G Q G+ NS+ P T+ G L ++ L AS
Sbjct: 174 H-----LQKYRLYLKRLSG-QHQNGLGNSYMGP--TDPSFGPLNPLNVNGLDFHTLASSP 225
Query: 320 IPPQTLAALHAELLGR-PTGN--LVTAVDQ 346
+P Q+LA++ A L R PT L + +DQ
Sbjct: 226 LPVQSLASIQAASLNRNPTNRFPLSSHIDQ 255
>gi|357480195|ref|XP_003610383.1| Two-component response regulator EHD1 [Medicago truncatula]
gi|355511438|gb|AES92580.1| Two-component response regulator EHD1 [Medicago truncatula]
Length = 597
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/261 (49%), Positives = 178/261 (68%), Gaps = 24/261 (9%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FPAG+RVL VDDD T L++LE+ L C YNVTT ++ AL++LRE+K FD+V+SDV M
Sbjct: 20 FPAGMRVLAVDDDPTYLKVLEKQLLTCNYNVTTTTKPVEALELLREKKDMFDLVISDVSM 79
Query: 90 PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
PDMDGFKLLE +GLEMDLP I + + VM+ + HGAC+YL+KPIR EELK+IWQHV
Sbjct: 80 PDMDGFKLLEQVGLEMDLPFIMLSVNDDIEKVMKSVIHGACNYLVKPIRMEELKSIWQHV 139
Query: 147 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 206
VRK+ E+K+ +N G + + + G D SS N + ++++ +EE+ +
Sbjct: 140 VRKKI-ESKD-QNQGIISDGVY---GQD----TSSENIANKNKMHGRKRKEQTEEEEAEQ 190
Query: 207 LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGID-------KAVPKRILELMNVPGLTRE 259
+ ST KKPR+VW ELH++FVSAVN +G+D +A PK+IL+LMNV GLTRE
Sbjct: 191 DNDEKCSTRKKPRLVWDHELHRKFVSAVNHVGLDISSTVIAEASPKKILDLMNVEGLTRE 250
Query: 260 NVASHLQEINLQKFRLYLKRL 280
NV+SH LQ++R+ +K L
Sbjct: 251 NVSSH-----LQRYRIDIKWL 266
>gi|413954817|gb|AFW87466.1| putative two-component response regulator family protein [Zea mays]
Length = 671
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/258 (50%), Positives = 169/258 (65%), Gaps = 16/258 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGC--FDVVLS 85
D FP GLRVL VDDD CL+ILE+ L+ C YN T + A ALD+LRERK FD+V+S
Sbjct: 4 DTFPVGLRVLAVDDDRVCLKILERQLKCCNYNTTVVTDAQTALDMLRERKDGNQFDLVIS 63
Query: 86 DVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNI 142
DV M MDGFKLLE IGLEMDLPVI + +M+GI+HGACDY++KP+R E+L+ I
Sbjct: 64 DVVMTKMDGFKLLELIGLEMDLPVIMLSANSETQTIMKGIKHGACDYMVKPVRLEQLRGI 123
Query: 143 WQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEE 202
W HVV+ ++ N GS + K S + + V E T + + + + K
Sbjct: 124 WTHVVKN--SKIDPRNNIGSDSDDVVQKLPSGDGDKGEKVGE----TRQKKYPKKNKKTV 177
Query: 203 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 262
D + +++ S KK RV W ELHQ+FV AV Q+GID+AVPK+ILE+M+V GLTRENVA
Sbjct: 178 DVADEDNEKTSAQKKQRVQWCGELHQKFVQAVRQIGIDRAVPKKILEIMDVEGLTRENVA 237
Query: 263 SHLQEINLQKFRLYLKRL 280
SH LQK+R+YL++L
Sbjct: 238 SH-----LQKYRIYLRKL 250
>gi|297796727|ref|XP_002866248.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312083|gb|EFH42507.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 642
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/301 (47%), Positives = 189/301 (62%), Gaps = 21/301 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDD+ TCLR LE++L RC Y+VT ++ AL++LRE FD+V+SDV
Sbjct: 12 DKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALELLRENSNMFDLVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
MPD DGFKLLE IGLEMDLPVI +VM+GI HGACDYL+KP+ +EL+NIW
Sbjct: 72 EMPDTDGFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWH 130
Query: 145 HVVRKRWNENKEHENSGS----LEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAK 200
HVV+K N +N G L ++ + S + N+ + + +
Sbjct: 131 HVVKK--NIKSYAKNIGPSRQLLPPSESNLVPSASKKRKEKANDSGDEDDSDREEDDGEG 188
Query: 201 EEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTREN 260
E DG D+ T KKPRVVWS ELHQ+FVSAV QLG+DKAVPK+IL+LM++ GLTREN
Sbjct: 189 SEQDG----DEAGTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTREN 244
Query: 261 VASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQI 320
VASH LQK+RLYLK+++ QQ ++F + ++ L ++ A+ QI
Sbjct: 245 VASH-----LQKYRLYLKKIDEGQQQNMTPDAFGTRDSSYFQMAQLD--GLRDFTATRQI 297
Query: 321 P 321
P
Sbjct: 298 P 298
>gi|50400641|sp|Q9FGT7.2|ARR18_ARATH RecName: Full=Two-component response regulator ARR18
Length = 635
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 142/297 (47%), Positives = 187/297 (62%), Gaps = 20/297 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDD+ TCLR LE++L RC Y+VT ++ AL++LRE FD+V+SDV
Sbjct: 12 DKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
MPD DGFKLLE IGLEMDLPVI +VM+GI HGACDYL+KP+ +EL+NIW
Sbjct: 72 EMPDTDGFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWH 130
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HVV+K K + E+D S + + VN+ + + + E D
Sbjct: 131 HVVKKNI---KSYAKLLPPSESDSVPSASRKRK--DKVNDSGDEDDSDREEDDGEGSEQD 185
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
G D T KKPRVVWS ELHQ+FVSAV QLG+DKAVPK+IL+LM++ GLTRENVASH
Sbjct: 186 G----DGSGTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASH 241
Query: 265 LQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIP 321
LQK+RLYLK+++ QQ ++F + ++ L ++ A+ QIP
Sbjct: 242 -----LQKYRLYLKKIDEGQQQNMTPDAFGTRDSSYFQMAQLD--GLRDFTAARQIP 291
>gi|255564288|ref|XP_002523141.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223537703|gb|EEF39326.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 473
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 176/280 (62%), Gaps = 23/280 (8%)
Query: 15 GYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILR 74
G S V ++FPAGLRVLVVDDD TCL ILE+MLR CLY VT C +A AL +LR
Sbjct: 16 GSSSLEKTSDCVSNEFPAGLRVLVVDDDRTCLLILEKMLRNCLYKVTKCRKAKDALSMLR 75
Query: 75 ERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLI 131
E K FD+V+ D+HMPDMDGF+LLE EM LPV+ +D + +G+ HGACDYLI
Sbjct: 76 EDKNKFDIVVIDLHMPDMDGFELLEIAEFEMGLPVVMMSSDDDHEVIKKGVLHGACDYLI 135
Query: 132 KPIREEELKNIWQHVVRKRWNENK-EHENSGSLEETD--HHKRGSDEIEYASSVNEGTEG 188
KP+R E LK IWQHV+RK+ N K E E LE+ K SD+ ++N
Sbjct: 136 KPVRMEALKMIWQHVIRKKKNTAKDELEQLIGLEDDILLLTKPDSDDDMIHGNLN----N 191
Query: 189 TFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRIL 248
T ++R+R E DD E DP+ T K R++W+ ELH++FV A N LG + AVP +IL
Sbjct: 192 TRNSKRRR--NNEYDD---EPSDPAATGKKRMIWTEELHEKFVRAFNHLGHENAVPLKIL 246
Query: 249 EL---MNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
E MNV +TRE++ASH LQK+R+YL++ + + Q
Sbjct: 247 ECLQRMNVHSITREHIASH-----LQKYRMYLRKQDDIPQ 281
>gi|357480191|ref|XP_003610381.1| Two-component response regulator EHD1 [Medicago truncatula]
gi|355511436|gb|AES92578.1| Two-component response regulator EHD1 [Medicago truncatula]
Length = 593
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 133/256 (51%), Positives = 173/256 (67%), Gaps = 17/256 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
+ FP G+RVL VDDD TCL++LE+ L C YNVTT ++ AL++LRE++ FD+V+SDV
Sbjct: 15 EDFPVGMRVLAVDDDQTCLKLLEKFLLMCKYNVTTTTKPVEALELLREKRDMFDLVISDV 74
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI----TDGRVSAVMRGIRHGACDYLIKPIREEELKNIW 143
MP+MDGFKLLE +GLE+DLP I D R VM+G+ GACDYL+KPIR EELKNIW
Sbjct: 75 SMPEMDGFKLLEQVGLEIDLPFIMLSGNDDR-ERVMKGVMKGACDYLVKPIRLEELKNIW 133
Query: 144 QHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEED 203
QHVVRK+ E+K+ N G + TD E ++ N+ K Q + +EE+
Sbjct: 134 QHVVRKKI-ESKDR-NKGII--TDGICSQDTSSENIANRNKTRGQKIKEQSEDEEEEEEE 189
Query: 204 DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 263
E ++ ST KKPR+VW ELH++FVS V+QL +A PK+I +LMNV GLTRENVAS
Sbjct: 190 AEEDNDEERSTRKKPRLVWDDELHKKFVSIVSQL---EAYPKKICDLMNVEGLTRENVAS 246
Query: 264 HLQEINLQKFRLYLKR 279
H LQK++L LKR
Sbjct: 247 H-----LQKYKLSLKR 257
>gi|255547922|ref|XP_002515018.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223546069|gb|EEF47572.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 419
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 131/255 (51%), Positives = 164/255 (64%), Gaps = 32/255 (12%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FPAGLRVLVVD+D T RILE+ML++C Y V TC + AL++LR RK +D+V+ DV
Sbjct: 14 FPAGLRVLVVDNDPTWSRILEKMLKKCSYQVATCG-SRDALNMLRGRKDEYDIVICDVTT 72
Query: 90 PDMDGFKLLEHIGLEMDLPVITDGRVSAVM---RGIRHGACDYLIKPIREEELKNIWQHV 146
DMDGF+LLEHIGL+MD PVI + +G+RHGACDYL+KPIR +EL+NIWQHV
Sbjct: 73 SDMDGFRLLEHIGLKMDCPVINASALXXASALQKGVRHGACDYLLKPIRMKELRNIWQHV 132
Query: 147 VRKRWNENKEHENSGSLEETDHHK-RGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDG 205
RKR +E +E E GS + D RG D +SV + KA
Sbjct: 133 FRKRIHEVRECEILGSDQACDGPLLRGED----LASVKKRKYADQKA------------- 175
Query: 206 ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHL 265
D S+ K R+VW+V+LHQ+FV AV+Q+G DK PK+IL+ MNVP LTRENVA H
Sbjct: 176 -----DISSAKMARLVWTVDLHQKFVKAVHQIGFDKIGPKKILDRMNVPWLTRENVAGH- 229
Query: 266 QEINLQKFRLYLKRL 280
LQK+RLYL RL
Sbjct: 230 ----LQKYRLYLSRL 240
>gi|145359387|ref|NP_200616.3| response regulator 18 [Arabidopsis thaliana]
gi|332009612|gb|AED96995.1| response regulator 18 [Arabidopsis thaliana]
Length = 618
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 138/291 (47%), Positives = 182/291 (62%), Gaps = 20/291 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL VDD+ TCLR LE++L RC Y+VT ++ AL++LRE FD+V+SDV MPD D
Sbjct: 1 MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTD 60
Query: 94 GFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 150
GFKLLE IGLEMDLPVI +VM+GI HGACDYL+KP+ +EL+NIW HVV+K
Sbjct: 61 GFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVVKKN 119
Query: 151 WNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESD 210
K + E+D S + + VN+ + + + E DG D
Sbjct: 120 I---KSYAKLLPPSESDSVPSASRKRK--DKVNDSGDEDDSDREEDDGEGSEQDG----D 170
Query: 211 DPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINL 270
T KKPRVVWS ELHQ+FVSAV QLG+DKAVPK+IL+LM++ GLTRENVASH L
Sbjct: 171 GSGTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASH-----L 225
Query: 271 QKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIP 321
QK+RLYLK+++ QQ ++F + ++ L ++ A+ QIP
Sbjct: 226 QKYRLYLKKIDEGQQQNMTPDAFGTRDSSYFQMAQLD--GLRDFTAARQIP 274
>gi|242093586|ref|XP_002437283.1| hypothetical protein SORBIDRAFT_10g024180 [Sorghum bicolor]
gi|241915506|gb|EER88650.1| hypothetical protein SORBIDRAFT_10g024180 [Sorghum bicolor]
Length = 685
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 122/279 (43%), Positives = 166/279 (59%), Gaps = 55/279 (19%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGC---FDVVL 84
D FPAGLRVL V+ D C ++LE+ L+ C YN T + A ALD+LRERK FD+V+
Sbjct: 4 DTFPAGLRVLAVEHDRVCRKVLERQLQYCNYNATMVTNAQTALDMLRERKEYGNQFDLVI 63
Query: 85 SDVHMP--DMDGFKLLEHIGLEMDLPVI---------------------TDGRVSAVMRG 121
S+V MP +MDGFKLLE IGLEMDLPVI + +M+G
Sbjct: 64 SNVVMPKPNMDGFKLLELIGLEMDLPVICNKALAQTYFLHFYGTLYVLSANSETQTIMKG 123
Query: 122 IRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASS 181
I+HGAC+Y++KP+R E+L+ IW HVV+ +TDH R
Sbjct: 124 IKHGACEYMVKPVRLEQLRGIWTHVVKN--------------SKTDHAIR-------KLP 162
Query: 182 VNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDK 241
+G + +++ ++ DD + + ST KK RV W ELHQ+FV A+NQ+G+D+
Sbjct: 163 CGDGDKVKNYSRKNKMVVDVADDDKDNT---STQKKQRVQWCGELHQKFVQAINQIGMDR 219
Query: 242 AVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRL 280
AVPK+ILE+MNV GLT+ENVASH LQK+R+YL++L
Sbjct: 220 AVPKKILEVMNVEGLTKENVASH-----LQKYRIYLRKL 253
>gi|147835104|emb|CAN70187.1| hypothetical protein VITISV_039080 [Vitis vinifera]
Length = 650
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/281 (46%), Positives = 171/281 (60%), Gaps = 35/281 (12%)
Query: 16 YGSSRAADVAVPD----QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALD 71
+G + D P QFP GLRVL VDD+I CL+IL +L +C Y VT ++A AL+
Sbjct: 134 FGLDMSDDYETPSPDGTQFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALE 193
Query: 72 ILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI----TDGRVSAVMRGIRHGAC 127
+LRE + FD+V++DV MPDMDGF LL+ IGLEMD+PVI D R S V++GIRHGA
Sbjct: 194 MLRENRXNFDIVITDVKMPDMDGFTLLKIIGLEMDIPVIMTSVNDDR-STVLKGIRHGAR 252
Query: 128 DYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTE 187
DYL+KP+R E+KNIWQHVVRK D K G E E A + + E
Sbjct: 253 DYLLKPVRVLEIKNIWQHVVRKNL--------------FDSGKPGVKE-EKAMEMEKSKE 297
Query: 188 GTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGI-DKAVPKR 246
+ + +E E D S KK R+ W+ ELH +F++A++QL DKAVPK+
Sbjct: 298 KEGGGEEEEEDHPKEHSFE----DGSVRKKQRLNWTSELHIKFLNAIHQLETADKAVPKK 353
Query: 247 ILELMNVPGLTRENVASHLQEINLQKFRLYLKR-LNGVSQQ 286
ILE+MN PGL+RENVASH LQK+R L++ VSQQ
Sbjct: 354 ILEIMNEPGLSRENVASH-----LQKYRKMLRKNCAKVSQQ 389
>gi|225446094|ref|XP_002270118.1| PREDICTED: uncharacterized protein LOC100266808 [Vitis vinifera]
Length = 643
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 170/281 (60%), Gaps = 34/281 (12%)
Query: 16 YGSSRAADVAVPD----QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALD 71
+G + D P QFP GLRVL VDD+I CL+IL +L +C Y VT ++A AL+
Sbjct: 126 FGLDMSDDYETPSPDGTQFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALE 185
Query: 72 ILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI----TDGRVSAVMRGIRHGAC 127
+LRE + FD+V++DV MPDMDGF LL+ IGLEMD+PVI D R S V++GIRHGA
Sbjct: 186 MLRENRENFDIVITDVKMPDMDGFTLLKIIGLEMDIPVIMTSVNDDR-STVLKGIRHGAR 244
Query: 128 DYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTE 187
DYL+KP+R E+KNIWQHVVRK D K G E E +
Sbjct: 245 DYLLKPVRVLEIKNIWQHVVRKNL--------------FDSGKPGVKE----EKAMEMEK 286
Query: 188 GTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGI-DKAVPKR 246
K + +E+ E +D S KK R+ W+ ELH +F++A++QL DKAVPK+
Sbjct: 287 SKEKGGGEEEEEEEDHPKEHSFEDGSVRKKQRLNWTSELHIKFLNAIHQLETADKAVPKK 346
Query: 247 ILELMNVPGLTRENVASHLQEINLQKFRLYLKR-LNGVSQQ 286
ILE+MN PGL+RENVASH LQK+R L++ VSQQ
Sbjct: 347 ILEIMNEPGLSRENVASH-----LQKYRKMLRKNCAKVSQQ 382
>gi|356554487|ref|XP_003545577.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Glycine max]
Length = 379
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/247 (47%), Positives = 161/247 (65%), Gaps = 11/247 (4%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP GL V+ +DDD CL +LE ++ +C YNVTT +QA L +LR+ FD+++SDV
Sbjct: 74 DRFPVGLCVVAIDDDQMCLTVLENLIHKCHYNVTTTNQAIKVLXMLRKNINKFDLLISDV 133
Query: 88 HMPDMDGFKLLEHIGLEMDLPVITDGR-----VSAVMRGIRHGACDYLIKPIREEELKNI 142
++PDMDGFKLLE +GL+MDLP IT + + + + GAC+YL KPIR EEL+NI
Sbjct: 134 NIPDMDGFKLLELVGLQMDLPFITKIKHLYSVFTFIQLDVIQGACEYLTKPIRIEELQNI 193
Query: 143 WQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEE 202
W+HV+R R ++K+ + + EE + G E A + T+ K +KR E+
Sbjct: 194 WKHVLRMRI-DSKDKNKTFANEEKASYMAG--ECSQAMAPKNNTDQNIKLGQKRKEQSED 250
Query: 203 DDGELESDDPST---TKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 259
++ E + KPR+VW VELH++F+ AV+ LGIDKA PKRIL+LMNV GLTRE
Sbjct: 251 EEEEEYHKENEEHLNQNKPRLVWDVELHRKFLVAVDDLGIDKAFPKRILDLMNVEGLTRE 310
Query: 260 NVASHLQ 266
NVASHLQ
Sbjct: 311 NVASHLQ 317
>gi|356573692|ref|XP_003554991.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 315
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 117/257 (45%), Positives = 155/257 (60%), Gaps = 28/257 (10%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
GL V+ VDDD T L I++QM +C Y V T S A AL+ + E K DV+L DVH+P+M
Sbjct: 13 GLWVVAVDDDTTILEIIKQMGFKCHYRVATFSDAPDALNYVLENKDRIDVILVDVHLPNM 72
Query: 93 DGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
DG++ L+HI E+D+PVI DG SAV + I HGACDY KP E + K +W+HV K
Sbjct: 73 DGYEFLKHINKEIDIPVIIMSVDGSTSAVRKAITHGACDYWTKPFSENQFKIMWKHVAMK 132
Query: 150 RWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELES 209
WNE K + S E+ASSV + K Q++ S +E D +
Sbjct: 133 AWNEKKLQKKDFS--------------EFASSV---LDANLKDQKEISSNSKESDVD--- 172
Query: 210 DDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEIN 269
D + KKPR+ W ELH QFV AV +G+DKA PK+ILE+MN+PGLT+++VASH
Sbjct: 173 DCDAQPKKPRIAWKGELHCQFVKAVMHIGLDKAQPKKILEVMNIPGLTKDHVASH----- 227
Query: 270 LQKFRLYLKRLNGVSQQ 286
LQK+R LK+ N V+ Q
Sbjct: 228 LQKYRFDLKKSNEVAVQ 244
>gi|109631200|gb|ABG35776.1| SRR380 [Striga asiatica]
Length = 432
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/202 (54%), Positives = 141/202 (69%), Gaps = 19/202 (9%)
Query: 89 MPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
MPDMDGFKLLE +GLEMDLPVI + VM+G+ HGACDYL+KP+R EEL+NIWQH
Sbjct: 1 MPDMDGFKLLEQVGLEMDLPVIMLSANSDPKLVMKGVTHGACDYLVKPVRIEELRNIWQH 60
Query: 146 VVRKRW----NENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKE 201
V+R++ NENK + S + + + G A N G ++++
Sbjct: 61 VIRRKKFVSKNENKSADQSKPNQASGEGQGG------AIPDNGDQNGKTNVRKRKDDENV 114
Query: 202 EDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENV 261
+DG E++DP+T KKPRVVWS+ELH++FV+AVNQLGI+KAVPKRIL+LMNV GLTRENV
Sbjct: 115 SEDGN-ENEDPATQKKPRVVWSIELHRKFVAAVNQLGIEKAVPKRILDLMNVNGLTRENV 173
Query: 262 ASHLQEINLQKFRLYLKRLNGV 283
ASH LQK+RLYLKR++ V
Sbjct: 174 ASH-----LQKYRLYLKRISSV 190
>gi|147775384|emb|CAN78184.1| hypothetical protein VITISV_031283 [Vitis vinifera]
Length = 609
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/265 (40%), Positives = 161/265 (60%), Gaps = 17/265 (6%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
GL ++VVDDD+ CL I+ +L+ Y V T + A AL LR R F ++++DVHMP+M
Sbjct: 20 GLHIMVVDDDVICLSIVAGILKTWKYEVVTVNSAQDALTTLRTRSNFFHLIVTDVHMPEM 79
Query: 93 DGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
DGF+ + E LPV+ D + S+++RG+ GA Y++KP+ ++LKN+WQ+ V
Sbjct: 80 DGFEFQRLVHEEFHLPVVMMSADDKESSMLRGLEAGAAFYIVKPVNYDDLKNLWQYAVGX 139
Query: 150 RWNENKEHENSGSLEETDH----HKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDG 205
+ + K H +E T K ++E+E S +NE ++RK + E +G
Sbjct: 140 K--KGKSHIVMQEIERTQGASXLEKTSNNEVE--SLMNEEKHNKRDSKRKTLKKTNEGNG 195
Query: 206 ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHL 265
+ E + KK +V+W+ LH +F+ A ++G+++AVPKRILE+MNVPGLTRENVASH
Sbjct: 196 K-EKSETVAPKKAKVIWTSALHNRFLEAARKIGLERAVPKRILEIMNVPGLTRENVASH- 253
Query: 266 QEINLQKFRLYLKRLNGVSQQGGIT 290
LQK+R++LKR+ S G IT
Sbjct: 254 ----LQKYRIFLKRVMETSSSGTIT 274
>gi|255636387|gb|ACU18532.1| unknown [Glycine max]
Length = 220
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 142/217 (65%), Gaps = 22/217 (10%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDDD CL++LE +LR+C Y+VTT +QA AL +LRE + FD+V+SDV
Sbjct: 13 DRFPVGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALTMLRENRNKFDLVISDV 72
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
+MPD+DGFKLLE +GLEMDLPVI G VM+G+ HGACDYL+KP+R EELKNIWQ
Sbjct: 73 NMPDIDGFKLLELVGLEMDLPVIMLSAHGDTKLVMKGVTHGACDYLLKPVRIEELKNIWQ 132
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKA-QRKRISAKEED 203
HVVR++ N + +N S EE + +A ++G A Q KR+ K +D
Sbjct: 133 HVVRRK-NFDSRDQNKASNEEKAPN--------FAGGGSQGLRSENSADQNKRLGKKRKD 183
Query: 204 DG---------ELESDDPSTTKKPRVVWSVELHQQFV 231
+ +DPS KK RVVWSVELH++FV
Sbjct: 184 QSDEEEEGGEENEDDEDPSAQKKARVVWSVELHRKFV 220
>gi|224143763|ref|XP_002325066.1| type-b response regulator [Populus trichocarpa]
gi|222866500|gb|EEF03631.1| type-b response regulator [Populus trichocarpa]
Length = 517
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/258 (45%), Positives = 161/258 (62%), Gaps = 25/258 (9%)
Query: 28 DQF-PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSD 86
D F PA LRVL +D ++ CL+ L +L++C Y VT+ + AA AL +LRE K + VV++D
Sbjct: 20 DMFNPADLRVLAIDANVVCLKYLVAILQKCQYRVTSTTLAAEALKMLRENKNDYHVVITD 79
Query: 87 VHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIW 143
V DMDGFKLLE IGLEMDLPVI + S++M+GIRHGA DYL+KP+R +E++NIW
Sbjct: 80 VKRLDMDGFKLLEIIGLEMDLPVILVSAEDSQSSIMKGIRHGARDYLLKPVRIQEMQNIW 139
Query: 144 QHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEED 203
QHVVRKR +++ + +S + E + S E A+ + KE++
Sbjct: 140 QHVVRKRLSDSSDKSSSFTKEIIEQESVPSTEP--------------MAEAEVTGVKEKE 185
Query: 204 DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGI--DKAVPKRILELMNVPGLTRENV 261
+ D + KKPRV WS ELH +FV V +L ++ PKRI E+MNV GL+REN+
Sbjct: 186 IIGNPNGDACSGKKPRVTWSSELHVKFVDCVEKLEARGERVQPKRIREMMNVEGLSRENI 245
Query: 262 ASHLQEINLQKFRLYLKR 279
ASH LQK+R LK+
Sbjct: 246 ASH-----LQKYRNLLKK 258
>gi|255539557|ref|XP_002510843.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223549958|gb|EEF51445.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 754
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 107/259 (41%), Positives = 155/259 (59%), Gaps = 26/259 (10%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+++L+VDDD L I+ ML+ C V T AL L+ G FD+V++D+HMP M+
Sbjct: 21 VQILIVDDDAPTLGIVSSMLKTCSLQVVTVKNPLDALSSLQSSDGAFDLVITDLHMPGMN 80
Query: 94 GFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH----- 145
G +L + I E +PV+ +DG+ SA++ + GA Y++KP+ +LKN+WQ+
Sbjct: 81 GIQLQKQIDEEFKIPVVIMSSDGKRSAILESLESGAVYYMVKPVNLRDLKNVWQYAMASK 140
Query: 146 ----VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKE 201
VV EN + E S S E + S E ++SV+ E K ++ + A++
Sbjct: 141 KGKEVVVAEEPENNDGEASASTE------KDSCEDNNSASVSANEESNNKKKKGKKRARD 194
Query: 202 EDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENV 261
D GE D PS KK +VVW+ LH +F+ A+N +G+DKAVPKRILE MNVPGLTRENV
Sbjct: 195 HDQGE---DAPSAPKKAKVVWTNSLHNRFLQAINHIGLDKAVPKRILEFMNVPGLTRENV 251
Query: 262 ASHLQEINLQKFRLYLKRL 280
ASH LQK+RL+LK++
Sbjct: 252 ASH-----LQKYRLFLKKV 265
>gi|224136878|ref|XP_002322438.1| type-b response regulator [Populus trichocarpa]
gi|222869434|gb|EEF06565.1| type-b response regulator [Populus trichocarpa]
Length = 716
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/267 (39%), Positives = 153/267 (57%), Gaps = 31/267 (11%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYN--------VTTCSQAAVALDILRERKGCFDVVLS 85
+++LVVDDD T L I+ ML+ C Y V T AL LR +KG FD+V++
Sbjct: 18 IKILVVDDDSTSLSIVSAMLKTCSYKENRKLELFVVTVKNPFDALSTLRLKKGLFDLVVT 77
Query: 86 DVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNI 142
D+HMP+M+G +L + + E LPVI +D ++R + GA Y++KPI +++LKN+
Sbjct: 78 DLHMPEMNGMELQQQVDEEFKLPVIIMSSDDSEKVILRTLEGGAAFYIVKPINKDDLKNV 137
Query: 143 WQHVVRKRWNENKE--HENSGSLEETDH----HKRGSDEIEYASSVNE---GTEGTFKAQ 193
WQ+ V + + E GS E + K DE+ A S N +
Sbjct: 138 WQYAVATKTGKYSLSIKEIGGSQESSSSTVFDQKISVDEVSSAKSTNIKICNEKDRINKN 197
Query: 194 RKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNV 253
RKR +E D +L KKP+VVW+ LH +F+ A+N +G+DKAVPKRILE M+V
Sbjct: 198 RKRTKEDQEVDSQL------APKKPKVVWTNSLHSRFLQAINHIGLDKAVPKRILEFMSV 251
Query: 254 PGLTRENVASHLQEINLQKFRLYLKRL 280
PGL+RENVASH LQK+R++LK++
Sbjct: 252 PGLSRENVASH-----LQKYRIFLKKV 273
>gi|109631198|gb|ABG35775.1| SRR383 [Striga asiatica]
Length = 456
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/220 (52%), Positives = 145/220 (65%), Gaps = 22/220 (10%)
Query: 118 VMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHE--NSGSLEETDHHKRGSDE 175
VM+G+ HGACDYLIKP+R E LKNIWQHV+RK+ E KE E SGS+EE++ + D
Sbjct: 3 VMKGVTHGACDYLIKPVRMEALKNIWQHVIRKKKYEWKEKEQEQSGSVEESERQPKPED- 61
Query: 176 IEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVN 235
++Y+SS NEG +RK + ++ + ST KKPRVVWSVELHQQFV+AVN
Sbjct: 62 LDYSSSANEGNNWKSSKKRKDDDDEGDERDDT-----STLKKPRVVWSVELHQQFVTAVN 116
Query: 236 QLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCA 295
QLGIDKAVPK+ILELM++PGLTRENVASH LQK+RLYLKRL+G G+ N F
Sbjct: 117 QLGIDKAVPKKILELMSIPGLTRENVASH-----LQKYRLYLKRLSG-QHHNGLGNPFMG 170
Query: 296 PIETNVKLGSLGRFDIQALAASGQIPPQTLAALHAELLGR 335
P T+ G + +S + PPQ+LA + A R
Sbjct: 171 P--TDPSFGPITPL------SSFEFPPQSLATIQAASTNR 202
>gi|308812550|ref|XP_003083582.1| OJ1695_H09.29 gene product (ISS) [Ostreococcus tauri]
gi|116055463|emb|CAL58131.1| OJ1695_H09.29 gene product (ISS) [Ostreococcus tauri]
Length = 297
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/232 (50%), Positives = 147/232 (63%), Gaps = 41/232 (17%)
Query: 89 MPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
MPD+DGFKLLE I E++LPV+ + S V+RGI HGA DYL+KP+R EEL+NIWQH
Sbjct: 1 MPDVDGFKLLEIIQFELNLPVLMMSANSDSSVVLRGIIHGAVDYLLKPVRIEELRNIWQH 60
Query: 146 VVRKRWNENKEHENSGSLE-----------ETDHHKRGSDEIEYASSVNEGTEGTFKAQR 194
VVR+ ++ NSGS + +T S+E+E A+ NE G+ KA++
Sbjct: 61 VVRRDYSA----RNSGSEDGVNPSSPSKRLKTSGSDSKSEEVERAA--NEA--GSSKARK 112
Query: 195 KRISAK-----EEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILE 249
K K +E + E + D ++KKPRVVWS ELH QFV+AVNQLGIDKAVPKRIL+
Sbjct: 113 KPAGKKGAKGSKEKEAERKGDAIDSSKKPRVVWSAELHTQFVTAVNQLGIDKAVPKRILD 172
Query: 250 LMNVPGLTRENVASHLQEINLQKFRLYLKRLNG---------VSQQGGITNS 292
LM + GLTRENVASH LQK+RLYLKRL G S GG++ S
Sbjct: 173 LMGIQGLTRENVASH-----LQKYRLYLKRLQGNDLMRNGSNASSSGGVSQS 219
>gi|358345518|ref|XP_003636824.1| Response regulator [Medicago truncatula]
gi|358348887|ref|XP_003638473.1| Response regulator [Medicago truncatula]
gi|355502759|gb|AES83962.1| Response regulator [Medicago truncatula]
gi|355504408|gb|AES85611.1| Response regulator [Medicago truncatula]
Length = 240
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/267 (44%), Positives = 156/267 (58%), Gaps = 67/267 (25%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VD D T L LE LR C Y+VTT SQA AL +LRE K FD+V++DV
Sbjct: 6 DRFPIGMRVLAVDGDSTHLSDLETRLRSCQYHVTTTSQAKTALTMLRENKDKFDLVIADV 65
Query: 88 HMPDMDGFKLLEHIGLEMDLPVITDGRVSA----VMRGIRHGACDYLIKPIREEELKNIW 143
H+PDMDG KLLE + LE DLPV+ S+ VM+ + HGA D+L+KP+R +ELK IW
Sbjct: 66 HLPDMDGLKLLELVELETDLPVVVMLSESSDNELVMKAVFHGASDFLVKPVRLQELKTIW 125
Query: 144 QHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEED 203
QHV+RK+ K++E+ AQ+K S
Sbjct: 126 QHVIRKK----KDNED------------------------------LSAQKKSQS----- 146
Query: 204 DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 263
VWSVELH +FV+AVNQLGIDKAVP++IL LMNV +TRE+VAS
Sbjct: 147 -----------------VWSVELHHKFVAAVNQLGIDKAVPEKILGLMNVENITREDVAS 189
Query: 264 HLQEINLQKFRL--YLKRLNGVSQQGG 288
H L+K+RL Y+K+++ V+ Q
Sbjct: 190 H-----LRKYRLIDYVKKVSSVANQHA 211
>gi|297741112|emb|CBI31843.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 152/251 (60%), Gaps = 13/251 (5%)
Query: 45 CLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLE 104
CL I+ +LR Y V T AL LR F +V++DVHMP++DGF+ + + E
Sbjct: 33 CLSIVAGILRTRRYQVVTVKNPLDALATLRSGSDFFHLVVTDVHMPELDGFEFQKKVQEE 92
Query: 105 MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSG 161
LPV+ D + S++++G+ GA Y++KP+ ++LKNIWQ+ V R + + + ++ G
Sbjct: 93 FQLPVVMMSADDKESSMLKGLEAGAAFYIVKPVNYDDLKNIWQYAVGPRKDNSVDMQDVG 152
Query: 162 SL--EETDHHKRGSD--EIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKK 217
EE+ K D +IE SSVNE + ++K ED G+ E+ D + K+
Sbjct: 153 PAPEEESPVEKTPDDPVDIESVSSVNEVNQSKRDPKKKASKRVIEDSGK-ENSDAVSPKR 211
Query: 218 PRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYL 277
+VVW+ LH +F+ AV ++G+++AVPKRILELMN+PGLTRENVASH LQK+R++L
Sbjct: 212 TKVVWTSALHTRFLEAVRKIGLERAVPKRILELMNMPGLTRENVASH-----LQKYRIFL 266
Query: 278 KRLNGVSQQGG 288
+R+ S G
Sbjct: 267 RRVAEASNSTG 277
>gi|147765741|emb|CAN73375.1| hypothetical protein VITISV_019100 [Vitis vinifera]
Length = 659
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 152/251 (60%), Gaps = 13/251 (5%)
Query: 45 CLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLE 104
CL I+ +LR Y V T AL LR F +V++DVHMP++DGF+ + + E
Sbjct: 33 CLSIVAGILRTRRYQVVTVKNPLDALATLRSGSDFFHLVVTDVHMPELDGFEFQKKVQEE 92
Query: 105 MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSG 161
LPV+ D + S++++G+ GA Y++KP+ ++LKNIWQ+ V R + + + ++ G
Sbjct: 93 FQLPVVMMSADDKESSMLKGLEAGAAFYIVKPVNYDDLKNIWQYAVGPRKDNSVDMQDVG 152
Query: 162 SL--EETDHHKRGSD--EIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKK 217
EE+ K D +IE SSVNE + ++K ED G+ E+ D + K+
Sbjct: 153 PAPEEESPVEKTPDDPVDIESVSSVNEVNQSKRDPKKKASKRVIEDSGK-ENSDAVSPKR 211
Query: 218 PRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYL 277
+VVW+ LH +F+ AV ++G+++AVPKRILELMN+PGLTRENVASH LQK+R++L
Sbjct: 212 TKVVWTSALHTRFLEAVRKIGLERAVPKRILELMNMPGLTRENVASH-----LQKYRIFL 266
Query: 278 KRLNGVSQQGG 288
+R+ S G
Sbjct: 267 RRVAEASNSTG 277
>gi|224120138|ref|XP_002318254.1| type-b response regulator [Populus trichocarpa]
gi|222858927|gb|EEE96474.1| type-b response regulator [Populus trichocarpa]
Length = 658
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/296 (37%), Positives = 168/296 (56%), Gaps = 50/296 (16%)
Query: 18 SSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYN--------VTTCSQAAVA 69
SS A ++P + +L+VDDD T L ++ L+ Y V T + A
Sbjct: 6 SSNALSSSLPK-----IHILIVDDDSTSLSVVSATLKTVSYKDNRNLELIVVTVKKPFDA 60
Query: 70 LDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGA 126
L ILR +KG FD+V+SD+HMP+M+G +L + + E LPVI +D + + R + GA
Sbjct: 61 LSILRLKKGLFDLVVSDLHMPEMNGMELQKQVEEEFKLPVIIMSSDESKNVISRSLEGGA 120
Query: 127 CDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASS----- 181
Y++KP + +LKN+W + V + NS S++E + GS E Y+S+
Sbjct: 121 AFYIVKPANKVDLKNVWHYAVAIKTG------NSLSIKEIE----GSREPSYSSTLVERL 170
Query: 182 ----VNEGTEGTFKAQRKRISAKEE-----DDGELESDDPSTTKKPRVVWSVELHQQFVS 232
VN T + + ++ KEE DD E++S S KKP+VVW+ LH +F+
Sbjct: 171 SLEDVNSATSINDEKRYRKNGRKEERKSTKDDQEVDSQPAS--KKPKVVWTNSLHNRFLL 228
Query: 233 AVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGG 288
A+N +G+DKAVPKRILE M+V GL+REN+ASH LQK+R++LK+ V+++GG
Sbjct: 229 ALNHIGLDKAVPKRILECMSVRGLSRENIASH-----LQKYRIFLKK---VAERGG 276
>gi|297792183|ref|XP_002863976.1| hypothetical protein ARALYDRAFT_357174 [Arabidopsis lyrata subsp.
lyrata]
gi|297309811|gb|EFH40235.1| hypothetical protein ARALYDRAFT_357174 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/248 (42%), Positives = 150/248 (60%), Gaps = 17/248 (6%)
Query: 27 PDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSD 86
P FP GLR+LV D+D + L++LE L++ Y VT C++ A+ LR + FD+ +
Sbjct: 32 PSNFPEGLRMLVFDEDSSHLQMLETNLQKFQYQVTICNEENKAMYALRNHRNRFDIAIIQ 91
Query: 87 VHMPDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIW 143
+ D D F+ L IG EMDLP+I D V +VM+ + +GA DYLIKPI+ EEL+ I+
Sbjct: 92 GNNSDGDMFRFLSEIGSEMDLPIIIISEDKSVQSVMKWMINGATDYLIKPIKPEELRIIF 151
Query: 144 QHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEED 203
+H+V+K + +G EE K G E +SSV + T +++ + E
Sbjct: 152 KHLVKKV--RERRSVVTGEAEE----KAGG---EKSSSVGDSTIRNPNKRKRSMCLDAEV 202
Query: 204 DGELESDD-----PSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 258
+ E D +++KK RVVW+ ELH++FV AV LG+DKAVPK+ILELMNV L+R
Sbjct: 203 NEEDRHDHNDRACAASSKKRRVVWTKELHKKFVDAVEYLGLDKAVPKKILELMNVENLSR 262
Query: 259 ENVASHLQ 266
ENVASHLQ
Sbjct: 263 ENVASHLQ 270
>gi|224130168|ref|XP_002320769.1| pseudo response regulator [Populus trichocarpa]
gi|222861542|gb|EEE99084.1| pseudo response regulator [Populus trichocarpa]
Length = 504
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 160/273 (58%), Gaps = 23/273 (8%)
Query: 18 SSRAADVAVPDQ----FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL 73
S R V V + FP G+R+LVV+ D TCLRI+ +ML+ Y VTT ++A AL IL
Sbjct: 3 SERVLSVEVTENNAGSFPIGVRILVVESDPTCLRIVSKMLQAFGYEVTTATRATDALRIL 62
Query: 74 RERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYL 130
RE++ +++L + +PDM+ +++LE +G LP++ D SA++ + GA YL
Sbjct: 63 REKEDEINLILIETRLPDMNQYEILETLGELSSLPIVVFSADNNESAMLGCLYKGAALYL 122
Query: 131 IKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEG----T 186
+KPI + ++KN+WQ R + + S S G E ASSV G T
Sbjct: 123 MKPIIKNDVKNLWQLTYRTKIKTAVSGKGSNSF-------HGGSSEEKASSVTAGNPSST 175
Query: 187 EGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKR 246
G + KR +E ++ + ++++ + KK ++VW+ ELH +F+ A+ LGID A PK+
Sbjct: 176 MGMTDQKGKRKELEETNNDDEDNNNLTVPKKRKLVWTNELHNRFLQAIRILGIDGAHPKK 235
Query: 247 ILELMNVPGLTRENVASHLQEINLQKFRLYLKR 279
IL+ MNVPGL +ENV+SH LQK+RLYLKR
Sbjct: 236 ILQHMNVPGLKKENVSSH-----LQKYRLYLKR 263
>gi|31338862|dbj|BAC77081.1| B-type response regulator [Oryza glaberrima]
Length = 341
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 153/276 (55%), Gaps = 21/276 (7%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
+P GLRVLV+DDD + L ++E +L +C Y VTT A+ + + D+V+SD
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 90 PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
P DG +L+ + + +P + + G + VM+ + +GA D+L+KP+R EEL NIWQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGASDFLLKPVRIEELSNIWQHI 126
Query: 147 VRKRWNENKEHENSGSLEETDHHKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
RK+ ++K + G+LE+ H A++ + TE + DD
Sbjct: 127 FRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTKSTATEALLAPLENEV----RDD 182
Query: 205 -----GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 259
GE+ D +K R+ W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE
Sbjct: 183 MVNYNGEIT--DIRDLRKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTRE 240
Query: 260 NVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCA 295
VASH LQK+R+ LK+ + + G T S A
Sbjct: 241 QVASH-----LQKYRMQLKKSIPTTSKHGATLSSTA 271
>gi|147782854|emb|CAN61302.1| hypothetical protein VITISV_003290 [Vitis vinifera]
Length = 594
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 148/291 (50%), Gaps = 67/291 (23%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLY----NVTTCS------------------------- 64
+RV+VVDDDI CL I+ ML+ Y NV C+
Sbjct: 21 IRVMVVDDDIICLSIVAGMLKTWKYQDMLNVVFCNFIKIIRQGCIRGEEASTRNGISSSV 80
Query: 65 ----QAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSA 117
A AL LR R F +V++DVHMP MDGF+ + + E +LPV+ D + S+
Sbjct: 81 VSVKNAEDALITLRTRSNFFHLVVTDVHMPKMDGFEFQKQVREEFNLPVVMMSADDKESS 140
Query: 118 VMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIE 177
++RG+ GA Y++KP+ ++LK++WQ+ + R +GS +
Sbjct: 141 ILRGLEAGAAFYIVKPVNYDDLKDLWQYALSPR--------------------KGSVSVX 180
Query: 178 YASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL 237
+ N+ + +K+ K + E E + +K +VVW+ LH F+ A+ ++
Sbjct: 181 HEEMQNK------RDSKKKAGKKVNEGNEQEKSEAIVPRKSKVVWTTALHNDFLEAIRKI 234
Query: 238 GIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGG 288
G+++AVPKRILE MN PGLTRENVASH LQK+R++LKR+ S G
Sbjct: 235 GLERAVPKRILEHMNEPGLTRENVASH-----LQKYRIFLKRVTEASSSDG 280
>gi|75327665|sp|Q7Y0W3.1|EHD1_ORYSI RecName: Full=Two-component response regulator EHD1; AltName:
Full=Protein EARLY HEADING DATE 1
gi|31338860|dbj|BAC77080.1| B-type response regulator [Oryza sativa Indica Group]
Length = 341
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 153/272 (56%), Gaps = 13/272 (4%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
+P GLRVLV+DDD + L ++E +L +C Y VTT A+ + + D+V+SD
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 90 PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
P DG +L+ + + +P + + G + VM+ + +GA D+L+KP+R EEL NIWQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 147 VRKRWNENKEHENSGSLEETDHHKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED- 203
RK+ ++K + G+LE+ H A++ + TE + + +
Sbjct: 127 FRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNY 186
Query: 204 DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 263
+GE+ D K R+ W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VAS
Sbjct: 187 NGEIT--DIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVAS 244
Query: 264 HLQEINLQKFRLYLKRLNGVSQQGGITNSFCA 295
H LQK+R+ LK+ + + G T S A
Sbjct: 245 H-----LQKYRMQLKKSIPTTSKHGATLSSTA 271
>gi|75327667|sp|Q7Y0W5.1|EHD1_ORYSJ RecName: Full=Two-component response regulator EHD1; AltName:
Full=Protein EARLY HEADING DATE 1
gi|31338856|dbj|BAC77078.1| B-type response regulator [Oryza sativa Japonica Group]
Length = 341
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 153/272 (56%), Gaps = 13/272 (4%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
+P GLRVLV+DDD + L ++E +L +C Y VTT A+ + + D+V+SD
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 90 PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
P DG +L+ + + +P + + G + VM+ + +GA D+L+KP+R EEL NIWQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 147 VRKRWNENKEHENSGSLEETDHHKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED- 203
RK+ ++K + G+LE+ H A++ + TE + + +
Sbjct: 127 FRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNY 186
Query: 204 DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 263
+GE+ D K R+ W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VAS
Sbjct: 187 NGEIT--DIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVAS 244
Query: 264 HLQEINLQKFRLYLKRLNGVSQQGGITNSFCA 295
H LQK+R+ LK+ + + G T S A
Sbjct: 245 H-----LQKYRMQLKKSIPTTSKHGATLSSTA 271
>gi|297735376|emb|CBI17816.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 170 bits (431), Expect = 2e-39, Method: Composition-based stats.
Identities = 100/217 (46%), Positives = 131/217 (60%), Gaps = 25/217 (11%)
Query: 27 PD--QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVL 84
PD QFP GLRVL VDD+I CL+IL +L +C Y VT ++A AL++LRE + FD+V+
Sbjct: 10 PDGTQFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLRENRENFDIVI 69
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVI----TDGRVSAVMRGIRHGACDYLIKPIREEELK 140
+DV MPDMDGF LL+ IGLEMD+PVI D R S V++GIRHGA DYL+KP+R E+K
Sbjct: 70 TDVKMPDMDGFTLLKIIGLEMDIPVIMTSVNDDR-STVLKGIRHGARDYLLKPVRVLEIK 128
Query: 141 NIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAK 200
NIWQHVVRK D K G E E + K + +
Sbjct: 129 NIWQHVVRKNL--------------FDSGKPGVKE----EKAMEMEKSKEKGGGEEEEEE 170
Query: 201 EEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL 237
E+ E +D S KK R+ W+ ELH +F++A++QL
Sbjct: 171 EDHPKEHSFEDGSVRKKQRLNWTSELHIKFLNAIHQL 207
>gi|224063953|ref|XP_002301318.1| predicted protein [Populus trichocarpa]
gi|222843044|gb|EEE80591.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 160/270 (59%), Gaps = 22/270 (8%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
F G+R+LVV+ D TCLRI+ +ML+ Y VTT ++A AL ILRE++ +++L + H+
Sbjct: 19 FAEGVRILVVESDPTCLRIVSKMLQAFGYEVTTATRATDALHILREKEDEINLILIETHL 78
Query: 90 PDMDGFKLLEHI-GLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
PDMD ++++E + + LP++ D VSA++ + GA YL+KPI + ++KN+WQ
Sbjct: 79 PDMDQYEIIETVRAMSSSLPIVVFSADNNVSAMLGWLYKGAALYLMKPIVKNDVKNLWQL 138
Query: 146 VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEG------TEGTFKAQRKRISA 199
RK K+ S+ H ++E ASSV G T G KR
Sbjct: 139 TYRK-----KKKTAVSSVGSNSFHAGLAEE--NASSVTAGIPSLLSTTGQSDQMGKRKEL 191
Query: 200 KEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 259
+E D+ + ++D+ + KKP +VW+ ELH +F+ A+ LG+D A PK+IL+ MNV GL +E
Sbjct: 192 EETDNDDEDNDNLTVLKKPELVWTNELHNRFLQAIRILGVDGAHPKKILQHMNVSGLKKE 251
Query: 260 NVASHLQEINLQKFRLYLKRLNGVSQQGGI 289
NV+SH LQK+RL LKR +Q+ I
Sbjct: 252 NVSSH-----LQKYRLSLKREQDTTQKTMI 276
>gi|31338858|dbj|BAC77079.1| B-type response regulator [Oryza sativa Japonica Group]
Length = 341
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 152/272 (55%), Gaps = 13/272 (4%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
+P GLRVLV+DDD + L ++E +L +C Y VTT A+ + + D+V+SD
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 90 PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
P DG +L+ + + +P + + G + VM+ + +GA D+L+KP+R EEL NIWQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 147 VRKRWNENKEHENSGSLEETDHHKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED- 203
RK+ ++K + G+LE+ H A++ + TE + + +
Sbjct: 127 FRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNY 186
Query: 204 DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 263
+GE+ D K R+ W+ +LH+QF++AVN L DKAVPK+IL +M V LTRE VAS
Sbjct: 187 NGEIT--DIRDLGKSRLTWTTQLHRQFIAAVNHLREDKAVPKKILGIMKVKHLTREQVAS 244
Query: 264 HLQEINLQKFRLYLKRLNGVSQQGGITNSFCA 295
H LQK+R+ LK+ + + G T S A
Sbjct: 245 H-----LQKYRMQLKKSIPTTSKHGATLSSTA 271
>gi|449528748|ref|XP_004171365.1| PREDICTED: uncharacterized protein LOC101224737 [Cucumis sativus]
Length = 631
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 144/256 (56%), Gaps = 28/256 (10%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ +L+VDDD T L I+ MLR C Y V T ALD LR RKG FD+V++D+HMP M+
Sbjct: 9 IHILLVDDDATSLAIVSAMLRLCKYQVVTLKDPMEALDTLRARKGYFDLVVTDLHMPQMN 68
Query: 94 GFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 150
G +L + + E LPVI D + S +++ + G Y++KPI +++K++WQ+ + +
Sbjct: 69 GLQLQKKVMQEFKLPVIMMSADEKPSVILKSLEEGVAFYMVKPISLDDVKHVWQYAITPK 128
Query: 151 WNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESD 210
++ + I+ S+++ + + K I + + +++
Sbjct: 129 --------------NVIPNQTTTTVIQRQLSIDKSSSSSTPCSEKEIIKSKSRSSKFKNN 174
Query: 211 DPSTT------KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
+K +V+W+ LH +F+ A+ +G+ KAVPK+ILE MNVPGLTRENVASH
Sbjct: 175 KAKQNSINIPIRKSKVIWTNSLHNRFLQAIKLIGLHKAVPKKILEFMNVPGLTRENVASH 234
Query: 265 LQEINLQKFRLYLKRL 280
LQK+R++LKR+
Sbjct: 235 -----LQKYRIFLKRV 245
>gi|294461183|gb|ADE76155.1| unknown [Picea sitchensis]
Length = 465
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 120/185 (64%), Gaps = 23/185 (12%)
Query: 111 TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHK 170
T+G S VM+GI HGACDY IKPIR EEL+NIWQHVVR+R E+ + ++ G E+ +
Sbjct: 17 TNGDTSVVMKGITHGACDYFIKPIRIEELRNIWQHVVRRRGRESLK-DDLGECED----R 71
Query: 171 RGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQF 230
SD E S +RK S+ + D + DD S+ K+ RV W+V+LHQQF
Sbjct: 72 EASDSPETTSK-----------KRKDTSSGDFSDEVI--DDISSLKRARVHWTVQLHQQF 118
Query: 231 VSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGIT 290
V AVNQLGIDKAVPK+I+E+M V GL+RENVASH LQK+RLYLKRL+G +
Sbjct: 119 VVAVNQLGIDKAVPKKIVEIMKVQGLSRENVASH-----LQKYRLYLKRLSGAISEPYPV 173
Query: 291 NSFCA 295
SF A
Sbjct: 174 ASFQA 178
>gi|449446191|ref|XP_004140855.1| PREDICTED: uncharacterized protein LOC101217116 [Cucumis sativus]
Length = 634
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 144/256 (56%), Gaps = 28/256 (10%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ +L+VDDD T L I+ MLR C Y V T ALD LR RKG FD+V++D+HMP M+
Sbjct: 9 IHILLVDDDATSLAIVSAMLRLCKYQVVTLKDPMEALDTLRARKGYFDLVVTDLHMPQMN 68
Query: 94 GFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 150
G +L + + E LPVI D + S +++ + G Y++KPI +++K++WQ+ + +
Sbjct: 69 GLQLQKKVMQEFKLPVIMMSADEKPSVILKSLEEGVAFYMVKPISLDDVKHVWQYAITPK 128
Query: 151 WNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESD 210
++ + I+ S+++ + + K I + + +++
Sbjct: 129 --------------NVIPNQTTTTVIQRQLSIDKSSSSSTPCSEKEIIKSKSRSSKFKNN 174
Query: 211 DPST------TKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
+K +V+W+ LH +F+ A+ +G+ KAVPK+ILE MNVPGLTRENVASH
Sbjct: 175 KAKQNSINIPIRKSKVIWTNSLHNRFLQAIKLIGLHKAVPKKILEFMNVPGLTRENVASH 234
Query: 265 LQEINLQKFRLYLKRL 280
LQK+R++LKR+
Sbjct: 235 -----LQKYRIFLKRV 245
>gi|412992344|emb|CCO20057.1| type-b response regulator [Bathycoccus prasinos]
Length = 580
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 114/169 (67%), Gaps = 6/169 (3%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVLVVDDD+ CL+I+ +ML++C Y VT+ + + AL+ LR +K FD+VLSDVHMPDMD
Sbjct: 12 LRVLVVDDDVLCLKIVTKMLQKCGYTVTSTTSSVTALEYLRTKKEEFDIVLSDVHMPDMD 71
Query: 94 GFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 150
GFKLLE I L++D+PV+ + S V+RGI HGA DYL+KP+R ELKNIWQHVVRK
Sbjct: 72 GFKLLEQIALDIDIPVLMMSVNADQSVVLRGIIHGAVDYLLKPVRIHELKNIWQHVVRKN 131
Query: 151 WNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISA 199
++ + S S+ RGS E + S +N + GT ++ R A
Sbjct: 132 GPDSLQRSGSMSMSPA-RSGRGSPEKD--SGMNATSNGTHMNKKLRTIA 177
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 59/67 (88%), Gaps = 5/67 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KKPRVVWS ELHQQFV+AVNQLGIDKAVPKRIL+LMNV GLTRENVASH LQK+RL
Sbjct: 340 KKPRVVWSAELHQQFVNAVNQLGIDKAVPKRILDLMNVQGLTRENVASH-----LQKYRL 394
Query: 276 YLKRLNG 282
YLKRL G
Sbjct: 395 YLKRLQG 401
>gi|255541448|ref|XP_002511788.1| sensor histidine kinase, putative [Ricinus communis]
gi|223548968|gb|EEF50457.1| sensor histidine kinase, putative [Ricinus communis]
Length = 437
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/297 (35%), Positives = 160/297 (53%), Gaps = 23/297 (7%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
AG+ +LVVD D CL I+ +ML Y V T +A AL ILRER+ D++L++VH+PD
Sbjct: 17 AGVSILVVDCDSACLAIVSKMLYISGYKVITAKRATDALHILRERQYELDLILTEVHLPD 76
Query: 92 MDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 148
MD ++LLE + LP++ D +A++ + GA YL+KPI ++K++WQ
Sbjct: 77 MDKYELLETMAEVSCLPIVILSADDDENAMLGCLFKGAVFYLLKPITMNDVKSLWQFSCV 136
Query: 149 KRWNENKEHENSGSLEETDHHKRGSDEI------EYASSVNEGTEGTFKAQRKRISAKEE 202
K N E S S +H + EI E S ++ + K++ K + +E
Sbjct: 137 KNRKNNVATEGSHS-----YHGHSTPEIASNEASECLSVLDTSQQNAQKSEGKEL--QEM 189
Query: 203 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 262
D E + + KKP+++W+ ELH +F+ A+ LGID A PK+IL+ MNVPGL +EN++
Sbjct: 190 DKDEEATVTSTFPKKPKLIWTNELHDRFLQAIRILGIDSAHPKKILKHMNVPGLRKENIS 249
Query: 263 SHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQ 319
SH LQK+RL LKR Q+ + P N++ G+ Q L Q
Sbjct: 250 SH-----LQKYRLSLKREQEAIQKTMYRDDHYPP--WNLETGTCEFLKAQFLMTRSQ 299
>gi|224120142|ref|XP_002318255.1| predicted protein [Populus trichocarpa]
gi|222858928|gb|EEE96475.1| predicted protein [Populus trichocarpa]
Length = 623
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 147/246 (59%), Gaps = 37/246 (15%)
Query: 60 VTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVS 116
V T + AL ILR +KG FD+V+SD+HMP+M+G +L + + E LPVI +D +
Sbjct: 16 VVTVKKPFDALSILRLKKGLFDLVVSDLHMPEMNGMELQKQVEEEFKLPVIIMSSDESKN 75
Query: 117 AVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEI 176
+ R + GA Y++KP + +LKN+W + V + NS S++E + GS E
Sbjct: 76 VISRSLEGGAAFYIVKPANKVDLKNVWHYAVAIKTG------NSLSIKEIE----GSREP 125
Query: 177 EYASS---------VNEGTEGTFKAQRKRISAKEE-----DDGELESDDPSTTKKPRVVW 222
Y+S+ VN T + + ++ KEE DD E++S S KKP+VVW
Sbjct: 126 SYSSTLVERLSLEDVNSATSINDEKRYRKNGRKEERKSTKDDQEVDSQPAS--KKPKVVW 183
Query: 223 SVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNG 282
+ LH +F+ A+N +G+DKAVPKRILE M+V GL+REN+ASH LQK+R++LK+
Sbjct: 184 TNSLHNRFLLALNHIGLDKAVPKRILECMSVRGLSRENIASH-----LQKYRIFLKK--- 235
Query: 283 VSQQGG 288
V+++GG
Sbjct: 236 VAERGG 241
>gi|15239829|ref|NP_199735.1| putative two-component response regulator-like APRR4 [Arabidopsis
thaliana]
gi|52783215|sp|Q9FJ16.1|APRR4_ARATH RecName: Full=Putative two-component response regulator-like APRR4;
AltName: Full=Pseudo-response regulator 4
gi|10177153|dbj|BAB10342.1| unnamed protein product [Arabidopsis thaliana]
gi|332008405|gb|AED95788.1| putative two-component response regulator-like APRR4 [Arabidopsis
thaliana]
Length = 292
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 146/246 (59%), Gaps = 20/246 (8%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVLV D+D + L ILE+ L++ Y VT C++ A+ LR + FD+ + V+
Sbjct: 38 FPEGLRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNN 97
Query: 90 PDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
+ D F+ L IG EMDLP+I D V +V + + +GA DYLIKPIR E+L+ +++H+
Sbjct: 98 AEGDIFRFLSEIGSEMDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHL 157
Query: 147 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 206
V+K + +G E+ K +SSV + T + KR S E + E
Sbjct: 158 VKKM--RERRSVVTGEAEKAAGEK--------SSSVGDSTIRN-PNKSKRSSCLEAEVNE 206
Query: 207 LESDD------PSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTREN 260
+ D S+ KK RVVW ELHQ F++AV+ LG+++AVPK+IL++M V ++REN
Sbjct: 207 EDRHDHNDRACASSAKKRRVVWDEELHQNFLNAVDFLGLERAVPKKILDVMKVDYISREN 266
Query: 261 VASHLQ 266
VASHLQ
Sbjct: 267 VASHLQ 272
>gi|358345516|ref|XP_003636823.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|358348885|ref|XP_003638472.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355502758|gb|AES83961.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355504407|gb|AES85610.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|403502189|gb|AFR46617.1| response regulator 1 [Medicago truncatula]
Length = 228
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/257 (40%), Positives = 140/257 (54%), Gaps = 74/257 (28%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDDD T L +LE +LR C Y+VTT S+A AL +L+E FD+V+++V
Sbjct: 6 DRFPIGMRVLAVDDDPTSLLLLETLLRSCQYHVTTTSEAITALTMLQENIDMFDLVIAEV 65
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
HMPDMDG KLLE +GLEMDLPVI G VM+ I HGA D+L+KP+R EEL+NIWQ
Sbjct: 66 HMPDMDGLKLLELVGLEMDLPVIMLSAHGETELVMKAISHGARDFLLKPVRLEELRNIWQ 125
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HV+R NKE + S+E H++ + +VN+ G KA K+I
Sbjct: 126 HVIR-----NKESQFVWSVEL---HRK------FLETVNQ--LGVDKAVPKKI------- 162
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
+LMNV +TRE+VA+H
Sbjct: 163 -------------------------------------------FDLMNVENITREDVATH 179
Query: 265 LQEINLQKFRLYLKRLN 281
LQK+RL+LKR++
Sbjct: 180 -----LQKYRLFLKRMD 191
>gi|357521359|ref|XP_003630968.1| Two-component response regulator ARR11 [Medicago truncatula]
gi|355524990|gb|AET05444.1| Two-component response regulator ARR11 [Medicago truncatula]
Length = 674
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/277 (36%), Positives = 147/277 (53%), Gaps = 62/277 (22%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FPA ++VLV+D DI L +E+ L + Y VTTC + A++++ + K FD+VL + M
Sbjct: 9 FPANVKVLVIDHDIHLLNAIEKKLSQFNYQVTTCWTVSSAMNLIAQ-KVHFDLVLLETQM 67
Query: 90 PDMDGFKLLEHIGLEMDLPVI----TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
PDMD F L+ + ++D+PVI ++G + ++ I +GACD +KP E ++K +W H
Sbjct: 68 PDMDSFDFLQQLTQQIDIPVIMTMCSEGSTTGILNAIENGACDCWVKPFSENQVKYMWHH 127
Query: 146 VVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNE--GTEGTFKAQRKRISAKEED 203
VRK NK+ + +NE G EG+ +I A+++
Sbjct: 128 AVRKMMKGNKKQK-----------------------INEQLGVEGS------QIRARDDS 158
Query: 204 DGELESDD---------------PSTTKKPRVVWSVELHQQFVSAVNQL------GIDKA 242
+ L +D TKK RVVWS+ELH+QF+ AV +L KA
Sbjct: 159 NLCLNDEDIPEPPPTKKTKKRKKTKKTKKERVVWSLELHEQFMKAVKELDASSSSSSSKA 218
Query: 243 VPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKR 279
VPK ILE M VPGLTRE V SH LQK+RLYL +
Sbjct: 219 VPKTILEHMKVPGLTREQVGSH-----LQKYRLYLNK 250
>gi|357488511|ref|XP_003614543.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355515878|gb|AES97501.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 304
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/250 (37%), Positives = 135/250 (54%), Gaps = 61/250 (24%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GL V+ +D D T L +E+M RC Y VT C+ A+ AL++L ERK CFDV+L D HM
Sbjct: 10 FPDGLNVIAIDHDTTFLNTIEEMCNRCHYQVTKCNTASEALNLL-ERKDCFDVMLIDAHM 68
Query: 90 PDMDGFKLLEHIGLEMDLPVITDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
P+MD + ++H ++++PVI+ ++V + I +GAC+Y KP+ EE+ K +WQHV RK
Sbjct: 69 PNMDAYDFVQHATGQLNIPVIS----NSVTKSITYGACEYWTKPLYEEQFKIMWQHVARK 124
Query: 150 RWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELES 209
ENK+H++ GSL+ H KR D+
Sbjct: 125 GLRENKKHKSVGSLDVQGHRKRERDD---------------------------------- 150
Query: 210 DDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEIN 269
D+ KKPR++ QF KA PK IL+ +++ GL+ +VASH
Sbjct: 151 DNVPNVKKPRLM-------QF----------KAKPKVILKRIDIHGLSAGHVASH----- 188
Query: 270 LQKFRLYLKR 279
LQK+R YLKR
Sbjct: 189 LQKYRNYLKR 198
>gi|297821174|ref|XP_002878470.1| hypothetical protein ARALYDRAFT_486765 [Arabidopsis lyrata subsp.
lyrata]
gi|297324308|gb|EFH54729.1| hypothetical protein ARALYDRAFT_486765 [Arabidopsis lyrata subsp.
lyrata]
Length = 431
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 143/252 (56%), Gaps = 29/252 (11%)
Query: 28 DQFPA-GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSD 86
++FP +RVL+VD D L ++ ++ + Y VT A+ L + K D+V+ D
Sbjct: 34 EEFPTTSIRVLLVDADSNSLLPMKNLMIQYSYQVTKYEDGEEAMAFLMKNKQEIDLVIWD 93
Query: 87 VHMPDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIW 143
HMPD++G L IG EMDLPV+ D + VM I++GACD+L+KP+ +E + +W
Sbjct: 94 FHMPDINGLDALNTIGKEMDLPVVIMSHDHKKETVMESIKYGACDFLVKPVSKEVIAVLW 153
Query: 144 QHVVRKRWNE---NKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAK 200
+HV RKR ++ +K E SG++E SD EY + G + +++ +
Sbjct: 154 RHVYRKRMSKSGLDKPGE-SGTVE--------SDPDEYD---DLGQDNLYQSNEEGSKNS 201
Query: 201 EEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRIL----ELMNVPG 255
+ GE + TKKPR+ W+ ELH +F AV +LG ++KA PK IL E MNV G
Sbjct: 202 SDQKGEKPA-----TKKPRMQWTTELHHKFEVAVEKLGSLEKAFPKTILKYMQEEMNVQG 256
Query: 256 LTRENVASHLQE 267
LTR NVASHLQ+
Sbjct: 257 LTRNNVASHLQK 268
>gi|50400670|sp|Q9M9B9.2|ARR19_ARATH RecName: Full=Putative two-component response regulator ARR19
Length = 407
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 145/268 (54%), Gaps = 44/268 (16%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
QFP VLVVD + T L ++Q++++ Y V+ + A AL L K ++V+ D H
Sbjct: 29 QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFH 88
Query: 89 MPDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
MP +DG + L+ I ++DLPV+ D + +VM+ +GACDY++KP++EE + NIWQH
Sbjct: 89 MPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQH 148
Query: 146 VVRKR---------------WNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTF 190
+VRKR W+E + S L TD G D + S G G
Sbjct: 149 IVRKRLIFKPDVAPPKPRMTWSEVFQPVQS-HLVPTD----GLDRDHFDSITINGGNGIQ 203
Query: 191 KAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILE 249
++K + P +KPR+ W+ ELHQ+F+ A+ + GI+KA PK ++E
Sbjct: 204 NMEKK------------QGKKP---RKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVE 248
Query: 250 L---MNVPGLTRENVASHLQE--INLQK 272
M + G+TR NVASHLQ+ INL++
Sbjct: 249 CLQEMRIEGITRSNVASHLQKHRINLEE 276
>gi|297741111|emb|CBI31842.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 126/209 (60%), Gaps = 17/209 (8%)
Query: 89 MPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
MP+MDGF+ + E LPV+ D + S+++RG+ GA Y++KP+ ++LKN+WQ+
Sbjct: 1 MPEMDGFEFQRLVHEEFHLPVVMMSADDKESSMLRGLEAGAAFYIVKPVNYDDLKNLWQY 60
Query: 146 VVRKRWNENKEHENSGSLEETDH----HKRGSDEIEYASSVNEGTEGTFKAQRKRISAKE 201
V + + K H +E T K ++E+E S +NE ++RK +
Sbjct: 61 AVGPK--KGKSHIVMQEIERTQGASQLEKTSNNEVE--SLMNEEKHNKRDSKRKTLKKAN 116
Query: 202 EDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENV 261
E +G+ E + KK +V+W+ LH +F+ A ++G+++AVPKRILE+MNVPGLTRENV
Sbjct: 117 EGNGK-EKSETVAPKKAKVIWTSALHNRFLEAARKIGLERAVPKRILEIMNVPGLTRENV 175
Query: 262 ASHLQEINLQKFRLYLKRLNGVSQQGGIT 290
ASH LQK+R++LKR+ S G IT
Sbjct: 176 ASH-----LQKYRIFLKRVMETSSSGTIT 199
>gi|147798455|emb|CAN72192.1| hypothetical protein VITISV_005693 [Vitis vinifera]
Length = 790
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 140/262 (53%), Gaps = 25/262 (9%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
VLVVD D T L + MLR Y V T + AL ++ ERK D+V++++HMPDMDG
Sbjct: 23 VLVVDCDPTSLMTISGMLRALTYQVVTVERVTDALAMILERKDEVDLVMTELHMPDMDGL 82
Query: 96 KLLEHIGLEMDLPVI---------------TDGRVSAVMRGIRHGACDYLIKPIREEELK 140
+LL+ I LPV+ D A++R + GA Y+ KP+ +K
Sbjct: 83 QLLDEIQKTSKLPVVNFFFFLDGNGNPVMSADAEEDAMLRSLNKGATYYMXKPVEMGSIK 142
Query: 141 NIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEY---ASSVNEGTEGTFKAQRKRI 197
N+WQ+V R +K+ + +G G +E + ++ ++ G G + +
Sbjct: 143 NLWQYVFLNR--RDKQLQKTGQKGGVQVESLGENESDVDAGSALISNGKHGYQEPTTDTV 200
Query: 198 SAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLT 257
++DD E ++ KK ++ W+ ELH +F+ A+ +LG+D A PK+IL LM V GLT
Sbjct: 201 ETDKDDDDEEDTLTSPIRKKAKLTWTTELHDKFLLAIGELGLDNAHPKKILHLMGVEGLT 260
Query: 258 RENVASHLQEINLQKFRLYLKR 279
+E+++SH LQK+RL +KR
Sbjct: 261 KEHISSH-----LQKYRLSVKR 277
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 85/154 (55%), Gaps = 8/154 (5%)
Query: 17 GSSRAADVAV-PDQFPAGLR---VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
GS +A+ +V P + G R VLVVD D TCL I+ MLR Y V T +A AL +
Sbjct: 500 GSEKASSSSVTPTEEFKGHRDICVLVVDCDPTCLMIVSGMLRALTYEVLTVDRAVDALAM 559
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDY 129
E D+V++++HMPDM G LL+ I LPV+ D +++ +R GA Y
Sbjct: 560 TLEGGCGVDLVMTELHMPDMYGLDLLDEIRRTSKLPVVIMSADSNEDVMLKSLRRGAEYY 619
Query: 130 LIKPIREEELKNIWQHVV-RKRWNENKEHENSGS 162
L+KP+ E++ N WQ+V R+R + E E GS
Sbjct: 620 LVKPVLMEDVTNFWQYVFKRRRQKLSLETEKKGS 653
>gi|357519887|ref|XP_003630232.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355524254|gb|AET04708.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 234
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 95/153 (62%), Gaps = 5/153 (3%)
Query: 25 AVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVL 84
++P QFP L VLVVD D L +M C Y VTTCS+A+ A +L E KGC DVVL
Sbjct: 9 SLPSQFPEDLNVLVVDHDTDVLNAAVEMSIPCNYQVTTCSKASFAFKLLTETKGCVDVVL 68
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKN 141
+ MPDMD + + H+ ++++ VI DG +AVM+ + +GAC++ IKP E ++KN
Sbjct: 69 IEAQMPDMDSYDFVRHVTQQINISVIMMCDDGSTNAVMKAVTNGACEFWIKPFIENQIKN 128
Query: 142 IWQHVVRKRWNENKEHENSGSLEETDHHKRGSD 174
+WQ V RK WNENK + G L+ KRGSD
Sbjct: 129 MWQCVARKVWNENK--HDLGILKVKSQSKRGSD 159
>gi|357519851|ref|XP_003630214.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355524236|gb|AET04690.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 265
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 95/153 (62%), Gaps = 5/153 (3%)
Query: 25 AVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVL 84
++P QFP L VLVVD D L +M C Y VTTCS+A+ A +L E KGC DVVL
Sbjct: 9 SLPSQFPEDLNVLVVDHDTDVLNAAVEMSIPCNYQVTTCSKASFAFKLLTETKGCVDVVL 68
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKN 141
+ MPDMD + + H+ ++++ VI DG +AVM+ + +GAC++ IKP E ++KN
Sbjct: 69 IEAQMPDMDSYDFVRHVTQQINISVIMMCDDGSTNAVMKAVTNGACEFWIKPFIENQIKN 128
Query: 142 IWQHVVRKRWNENKEHENSGSLEETDHHKRGSD 174
+WQ V RK WNENK + G L+ KRGSD
Sbjct: 129 MWQCVARKVWNENK--HDLGILKVKSQSKRGSD 159
>gi|51038103|gb|AAT93906.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222631502|gb|EEE63634.1| hypothetical protein OsJ_18451 [Oryza sativa Japonica Group]
Length = 368
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 138/290 (47%), Gaps = 79/290 (27%)
Query: 11 SGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYN----------- 59
+G SS + +A + P G+RVL++D+ T L+I+ ++L C Y
Sbjct: 2 AGSCSVASSNKSKLADEEFSPVGMRVLLIDESTTYLKIITKLLLNCGYKGLTVTNFEITY 61
Query: 60 ------VTTCSQAAVALDILRERKGCFDVVLSDVHMP-DMDGFKLLEHIGLEMDLPVIT- 111
VT + A A++ L E +D+VL++VH P +DGF LL++ G +MDLPV+
Sbjct: 62 VWRVDEVTPKTAARDAVEELHENPWSYDMVLTEVHAPAGIDGFNLLQYAGTDMDLPVVVF 121
Query: 112 --DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHH 169
D V++ + GACDYL+KP+R EELKNIWQHV R++ SG
Sbjct: 122 SADDDKRTVLKCVNSGACDYLVKPLRHEELKNIWQHVYRRKL-------RSGG------- 167
Query: 170 KRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQ 229
R+ +A GE+ K R W ELH++
Sbjct: 168 ------------------------RRAAAAGNSSKGEI---------KKRFRWPKELHER 194
Query: 230 FVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKR 279
FVS V QLG+DKA P +IL L+N LTR+ Q+FR+ L +
Sbjct: 195 FVSVVLQLGVDKATPNQILPLLNREDLTRD-----------QRFRIALTK 233
>gi|357458949|ref|XP_003599755.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|357469643|ref|XP_003605106.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355488803|gb|AES70006.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355506161|gb|AES87303.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 247
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 122/235 (51%), Gaps = 45/235 (19%)
Query: 72 ILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACD 128
I +K CFDV+L D MP+MD ++H+ L++ +P I D +++M+ I GAC+
Sbjct: 31 ICWTKKCCFDVMLIDARMPNMDACDFVQHVSLQLQIPAIMMAVDSTKNSIMKSIECGACE 90
Query: 129 YLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEG 188
Y KP+ E++ K +WQHV RK ENKE+ GS
Sbjct: 91 YWTKPLIEKKFKTMWQHVARKGMPENKEYAIVGS-------------------------S 125
Query: 189 TFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRIL 248
+A RKR +E+ D E+ K R WS ELHQ+F+ AVNQLG+DKA PK+I
Sbjct: 126 MVQANRKR--GREDADASKETH----AKTARFSWSPELHQRFLWAVNQLGLDKATPKKIQ 179
Query: 249 ELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKL 303
++M+VP +T+E+V K+R Y+K + +G + S +P ET L
Sbjct: 180 KIMDVPNMTKEHV----------KYRNYIKS-STKETKGRMKKSKMSPFETQFSL 223
>gi|255547920|ref|XP_002515017.1| Two-component response regulator ARR14, putative [Ricinus communis]
gi|223546068|gb|EEF47571.1| Two-component response regulator ARR14, putative [Ricinus communis]
Length = 338
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 128/226 (56%), Gaps = 27/226 (11%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D FPAGLRV+VVDDD T L ILE+ML+RC VTTC A L +LRE + +D+V+SDV
Sbjct: 11 DAFPAGLRVVVVDDDPTWLSILERMLKRCSCEVTTCCSARDVLALLRENRYGYDIVISDV 70
Query: 88 HMPDMDGFKLLEHIG-------LEMDLPVITDGRVSAVMRGIRHGACDYLIKPIREEELK 140
MP MD F L IG L + DG S VMRGI+ GAC+YL+KPIR +EL+
Sbjct: 71 IMPGMDVFLHLLFIGSMLLTEHLYRFTVISVDGERSRVMRGIQLGACEYLLKPIRMKELR 130
Query: 141 NIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYA-SSVNEGTEGTFKAQRKRISA 199
NI QHV R++ + + E S+E G+ +++ A + +++ G S
Sbjct: 131 NICQHVFRRKIQKEIDIE---SIE-------GTIQVQMAINGLDKSNGGHLLCGENLTSV 180
Query: 200 KEEDDGELESDDPS-----TTKKPRVVWSVELHQQFVSAVNQLGID 240
K + + + DD +TKK V++ HQ+F AVNQ+G D
Sbjct: 181 KIGKEVQNKHDDKGPGGNFSTKKSAVIF----HQKFDKAVNQIGPD 222
>gi|242034251|ref|XP_002464520.1| hypothetical protein SORBIDRAFT_01g019980 [Sorghum bicolor]
gi|241918374|gb|EER91518.1| hypothetical protein SORBIDRAFT_01g019980 [Sorghum bicolor]
Length = 302
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 127/235 (54%), Gaps = 32/235 (13%)
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREE 137
D+++SDV P D +L+ + + D+P + ++G S VM+ I GA D+LIKP+R E
Sbjct: 12 DLIISDVCFPTEDSLLILQEVTTKFDIPTVIMSSNGDASIVMKYITSGASDFLIKPVRIE 71
Query: 138 ELKNIWQHVVRKRW-NENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKR 196
LKNIWQHV RK+ EN+ NS + D++ Y ++ + A R
Sbjct: 72 VLKNIWQHVFRKQLIGENRSCSNSA---------QHLDQVSYPPTIAPASTC---ATRTT 119
Query: 197 ISAKEEDDGELESDDPSTT----------KKPRVVWSVELHQQFVSAVNQLGIDKAVPKR 246
E LES TT +K R+ W+ +LH+QF++AVN LG +KAVPK+
Sbjct: 120 GIITEAATATLESATRETTNGTVTDIQDLRKSRLSWTTQLHRQFIAAVNSLG-EKAVPKK 178
Query: 247 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNV 301
ILE M V LTRE VASH LQK+RL+L++LN + + P E+N+
Sbjct: 179 ILETMKVKHLTREQVASH-----LQKYRLHLRKLNQTLHKDDTPSPSSHPNESNI 228
>gi|50400667|sp|Q9LZJ8.1|ARR20_ARATH RecName: Full=Putative two-component response regulator ARR20
gi|7362747|emb|CAB83117.1| putative protein [Arabidopsis thaliana]
Length = 426
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 137/245 (55%), Gaps = 32/245 (13%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
RVL+V D L+ ++ + Y VT A+ L + K D+V+ D HMPD++G
Sbjct: 42 RVLLVGADSNS--SLKNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIWDFHMPDING 99
Query: 95 FKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRW 151
L IG +MDLPV+ + + VM I++GACD+L+KP+ +E + +W+HV RKR
Sbjct: 100 LDALNIIGKQMDLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVIAVLWRHVYRKRM 159
Query: 152 NE---NKEHENSGSLE-ETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGEL 207
++ +K E SG++E + D + D++E + EG+ + KEE
Sbjct: 160 SKSGLDKPGE-SGTVESDPDEY----DDLEQDNLYESNEEGS----KNTCDHKEEK---- 206
Query: 208 ESDDPSTTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELM----NVPGLTRENVA 262
S TKKPR+ W+ ELH +F AV ++G ++KA PK IL+ M NV GLTR NVA
Sbjct: 207 -----SPTKKPRMQWTPELHHKFEVAVEKMGSLEKAFPKTILKYMQEELNVQGLTRNNVA 261
Query: 263 SHLQE 267
SHLQ+
Sbjct: 262 SHLQK 266
>gi|413943651|gb|AFW76300.1| putative two-component response regulator family protein [Zea mays]
Length = 378
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 110/187 (58%), Gaps = 23/187 (12%)
Query: 118 VMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIE 177
+M+GI+HGACDY++KP+R E+L+ IW HVV+ NS + T GSD+
Sbjct: 25 IMKGIKHGACDYIVKPVRLEQLRGIWTHVVK----------NSRTDPRTSIIDSGSDDDV 74
Query: 178 YASSVNEGTEG------TFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFV 231
+G EG K + + + D S++ S KKPRV W +LH++FV
Sbjct: 75 QKLPSGDGGEGDKVGANRRKKKCSKKNKPAVDVAGGHSENTSAQKKPRVQWCGQLHRKFV 134
Query: 232 SAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITN 291
AV+Q+GIDKAVPK+ILE MNV G+TRENVASH LQK+R+YL++L + G +N
Sbjct: 135 EAVHQIGIDKAVPKKILEAMNVEGITRENVASH-----LQKYRIYLRKL--IEGTLGNSN 187
Query: 292 SFCAPIE 298
SF E
Sbjct: 188 SFADETE 194
>gi|147866630|emb|CAN81576.1| hypothetical protein VITISV_027774 [Vitis vinifera]
Length = 137
Score = 136 bits (343), Expect = 3e-29, Method: Composition-based stats.
Identities = 69/108 (63%), Positives = 81/108 (75%), Gaps = 7/108 (6%)
Query: 23 DVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDV 82
+V V DQF GL+VLVVDDD+T LRILEQMLR Y+VTTCSQA +AL+ILRE+K CFD+
Sbjct: 29 NVVVSDQFSTGLKVLVVDDDVTRLRILEQMLR---YHVTTCSQATIALNILREKKDCFDI 85
Query: 83 VLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGAC 127
VLSD +P M +KLLEH+GLE DLP+I DGR AVMR H C
Sbjct: 86 VLSDARVPGMIDYKLLEHVGLETDLPIIMMSADGRTGAVMRD-SHSWC 132
>gi|357503493|ref|XP_003622035.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355497050|gb|AES78253.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 602
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 28/222 (12%)
Query: 60 VTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIT---DGRVS 116
V T A AL L+E +G FD+V+++ H+ M+G + +HI + +P+I D R S
Sbjct: 17 VVTAKDARHALITLQENEGLFDLVITEFHLVGMNGLEFQKHIKDQFQIPIIMMSEDNRPS 76
Query: 117 AVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEI 176
+ + + +GA Y++KP E+ K+IW++V+ + KE SL + + S E
Sbjct: 77 LISKTLENGAAQYIVKPFCAEDFKDIWKYVMEGK----KEKLFIESLFVRNEEEETSSEP 132
Query: 177 EYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQ 236
+ +E GE D KK ++VW+ LH+ F+ AVNQ
Sbjct: 133 KNKKK-------------HCKRKSKESQGE---KDIQVVKKQKLVWTPYLHKMFLLAVNQ 176
Query: 237 LGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLK 278
+G++KAVPK+ILE+MN+P LTRENVASH LQK+R++L+
Sbjct: 177 IGLEKAVPKKILEIMNIPNLTRENVASH-----LQKYRIFLR 213
>gi|374095508|sp|Q9LYP5.3|ARR21_ARATH RecName: Full=Putative two-component response regulator ARR21
Length = 613
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 143/280 (51%), Gaps = 37/280 (13%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ V+VVDDD L I+ +ML+ Y V AL L+ ++ D++++D +MP M+
Sbjct: 16 INVMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKIQRDNIDLIITDYYMPGMN 75
Query: 94 GFKLLEHIGLEM-DLPV-ITDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRW 151
G +L + I E +LPV + + + GA ++ KPI +L I+Q + +
Sbjct: 76 GLQLKKQITQEFGNLPVLVMSSDTNKEEESLSCGAMGFIPKPIHPTDLTKIYQFALSNKR 135
Query: 152 N------ENKEHENSG---------SLEETDHHKRGSDEIEYAS---SVNE------GTE 187
N + H+++ E+ D K + S +VN T+
Sbjct: 136 NGKSTLSTEQNHKDADVSVPQQITLVPEQADVLKTKRKNCSFKSDSRTVNSTNGSCVSTD 195
Query: 188 GTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRI 247
G+ K ++++ + DDGE S KK ++ W+ LH F+ A+ +G+DKAVPK+I
Sbjct: 196 GSRKNRKRKPNGGPSDDGESMS---QPAKKKKIQWTDSLHDLFLQAIRHIGLDKAVPKKI 252
Query: 248 LELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 287
L M+VP LTRENVASH LQK+R++L+R V++QG
Sbjct: 253 LAFMSVPYLTRENVASH-----LQKYRIFLRR---VAEQG 284
>gi|255573419|ref|XP_002527635.1| transcription factor, putative [Ricinus communis]
gi|223532940|gb|EEF34706.1| transcription factor, putative [Ricinus communis]
Length = 478
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 146/294 (49%), Gaps = 39/294 (13%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
A +++ FP GLRVL++++D ++ L Y V+ AL + ++ F
Sbjct: 5 ANELSAWKDFPKGLRVLLLEEDSISAEEIKSKLEAMDYIVSLFCNENEALSAISDKPESF 64
Query: 81 DVVLSDVHMPDMDG-FKLLEHIGLEMDLPVITDGRV---SAVMRGIRHGACDYLIKPIRE 136
V + +V + +G FK LE DLP I + S +M+ I GA ++L KP+ E
Sbjct: 65 HVAIVEVSTSNSNGNFKFLE---TAKDLPTIMTSNIHCLSTMMKCIALGAVEFLRKPLSE 121
Query: 137 EELKNIWQHVVRKRWNEN--------KEHENSGS---LEETDHHKRGSDEIEYASSVNEG 185
E+L+NIWQHVV K +N K +SG+ + + +R + +E +V+
Sbjct: 122 EKLRNIWQHVVHKAFNAGGNVVSDSLKPVNDSGASIPQLKVETEERKNKNLERTENVSPA 181
Query: 186 TEGTFK----------AQRKRISAKEEDDGELESDDPSTT-----------KKPRVVWSV 224
E ++ ++ DG E+ + ++ KK +V W+
Sbjct: 182 HENEYEQSPLSDKYPAPSTPQLKQGASSDGSAENPNKASRHHKSYGTKVNRKKMKVDWTP 241
Query: 225 ELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLK 278
ELH++FV AV QLG+D+A+P RILE+M V GLTR NVASHLQ+ + K + K
Sbjct: 242 ELHKKFVQAVEQLGVDQAIPSRILEMMKVEGLTRHNVASHLQKFRMHKRHILPK 295
>gi|334186214|ref|NP_191826.2| putative two-component response regulator ARR20 [Arabidopsis
thaliana]
gi|332646857|gb|AEE80378.1| putative two-component response regulator ARR20 [Arabidopsis
thaliana]
Length = 352
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 122/210 (58%), Gaps = 30/210 (14%)
Query: 70 LDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGA 126
+ L + K D+V+ D HMPD++G L IG +MDLPV+ + + VM I++GA
Sbjct: 1 MAFLMKNKHEIDLVIWDFHMPDINGLDALNIIGKQMDLPVVIMSHEYKKETVMESIKYGA 60
Query: 127 CDYLIKPIREEELKNIWQHVVRKRWNE---NKEHENSGSLE-ETDHHKRGSDEIEYASSV 182
CD+L+KP+ +E + +W+HV RKR ++ +K E SG++E + D + D++E +
Sbjct: 61 CDFLVKPVSKEVIAVLWRHVYRKRMSKSGLDKPGE-SGTVESDPDEY----DDLEQDNLY 115
Query: 183 NEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLG-IDK 241
EG+ + KEE S TKKPR+ W+ ELH +F AV ++G ++K
Sbjct: 116 ESNEEGS----KNTCDHKEEK---------SPTKKPRMQWTPELHHKFEVAVEKMGSLEK 162
Query: 242 AVPKRILELM----NVPGLTRENVASHLQE 267
A PK IL+ M NV GLTR NVASHLQ+
Sbjct: 163 AFPKTILKYMQEELNVQGLTRNNVASHLQK 192
>gi|242093736|ref|XP_002437358.1| hypothetical protein SORBIDRAFT_10g025500 [Sorghum bicolor]
gi|241915581|gb|EER88725.1| hypothetical protein SORBIDRAFT_10g025500 [Sorghum bicolor]
Length = 581
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 100/166 (60%), Gaps = 17/166 (10%)
Query: 115 VSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSD 174
+ + + I+HGAC Y++KP+R E +KNIW HVVRK + + N+ R +
Sbjct: 1 METMAKAIQHGACHYMVKPVRPEMVKNIWLHVVRKSKSNIRNKVNN----------RNDN 50
Query: 175 EIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVELHQQFVSA 233
+ V++ + K RK +D DG + + ST KK RV W+ +LH +F+ A
Sbjct: 51 PSQIGQPVDDEKDDA-KHTRKHCKKNRKDGDGSEKDEVISTQKKQRVEWTRQLHSKFLEA 109
Query: 234 VNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKR 279
+N +G+D AVPK+ILE+MNV G+T+ENVASH LQKFR+YLK+
Sbjct: 110 INHIGMDNAVPKKILEVMNVDGITKENVASH-----LQKFRMYLKK 150
>gi|15240724|ref|NP_196338.1| putative two-component response regulator ARR21 [Arabidopsis
thaliana]
gi|7546699|emb|CAB87277.1| putative protein [Arabidopsis thaliana]
gi|332003739|gb|AED91122.1| putative two-component response regulator ARR21 [Arabidopsis
thaliana]
Length = 621
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 146/288 (50%), Gaps = 45/288 (15%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAV--------ALDILRERKGCFDVVLS 85
+ V+VVDDD L I+ +ML+ Y + + AV AL L+ ++ D++++
Sbjct: 16 INVMVVDDDHVFLDIMSRMLQHSKYRDPSVMEIAVIAVDDPKKALSTLKIQRDNIDLIIT 75
Query: 86 DVHMPDMDGFKLLEHIGLEM-DLPV-ITDGRVSAVMRGIRHGACDYLIKPIREEELKNIW 143
D +MP M+G +L + I E +LPV + + + GA ++ KPI +L I+
Sbjct: 76 DYYMPGMNGLQLKKQITQEFGNLPVLVMSSDTNKEEESLSCGAMGFIPKPIHPTDLTKIY 135
Query: 144 QHVVRKRWN------ENKEHENSG---------SLEETDHHKRGSDEIEYAS---SVNE- 184
Q + + N + H+++ E+ D K + S +VN
Sbjct: 136 QFALSNKRNGKSTLSTEQNHKDADVSVPQQITLVPEQADVLKTKRKNCSFKSDSRTVNST 195
Query: 185 -----GTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGI 239
T+G+ K ++++ + DDGE S KK ++ W+ LH F+ A+ +G+
Sbjct: 196 NGSCVSTDGSRKNRKRKPNGGPSDDGESMS---QPAKKKKIQWTDSLHDLFLQAIRHIGL 252
Query: 240 DKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 287
DKAVPK+IL M+VP LTRENVASH LQK+R++L+R V++QG
Sbjct: 253 DKAVPKKILAFMSVPYLTRENVASH-----LQKYRIFLRR---VAEQG 292
>gi|212275528|ref|NP_001130318.1| uncharacterized protein LOC100191412 [Zea mays]
gi|194688832|gb|ACF78500.1| unknown [Zea mays]
Length = 471
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 71/87 (81%), Gaps = 6/87 (6%)
Query: 208 ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQE 267
E D+PS KKPRVVWS+ELH++FV+AVNQLGIDKAVPKRILELMNV LTRENVASH
Sbjct: 16 EGDEPSAAKKPRVVWSIELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENVASH--- 72
Query: 268 INLQKFRLYLKRLNGV-SQQGGITNSF 293
LQK+RLYLKRL+ V SQQ I +F
Sbjct: 73 --LQKYRLYLKRLSAVASQQASIVAAF 97
>gi|356511480|ref|XP_003524454.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 480
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 144/301 (47%), Gaps = 46/301 (15%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
A D+ FP GL+VL+++ D + L YNV+T + AL + F
Sbjct: 5 ANDLQEWKDFPKGLKVLLLERDNISAAEIRAKLEAMDYNVSTFCEENEALSAISSGLESF 64
Query: 81 DVVLSDVHMPD-MDGFKLLEHIGLEMDLPVITDGR---VSAVMRGIRHGACDYLIKPIRE 136
+ + +V GFK LE+ DLP I ++ +M+ I GA ++L KP+ E
Sbjct: 65 HIAIVEVSSSSGQGGFKFLENAK---DLPTIMTSNNHCLNTMMKCIALGAVEFLRKPLSE 121
Query: 137 EELKNIWQHVVRKRWNEN-----------KEHENSGSLEETD---HHKRGSDEIEYASSV 182
++L+NIWQHVV K +N KE S +TD H R S +IE S
Sbjct: 122 DKLRNIWQHVVHKAFNARASILSESLKPVKESVVSMLQLQTDDEQHESRVSRDIEKVSRF 181
Query: 183 ----NEGTEGTFK-----AQRKRISAKEEDDGELESDDPSTT----------------KK 217
+E + G K + R + DDG+ + +T KK
Sbjct: 182 VDNDHELSSGNDKYPAPSTPQLRQGTRLLDDGDCQEQTNCSTGKESVHSDSCEIRGNQKK 241
Query: 218 PRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYL 277
+V W+ ELH+ FV AV QLGID+A+P RILELM V GLTR NVASHLQ+ + K ++
Sbjct: 242 IKVDWTPELHKTFVKAVEQLGIDQAIPSRILELMKVEGLTRHNVASHLQKYRMHKRQILP 301
Query: 278 K 278
K
Sbjct: 302 K 302
>gi|414865597|tpg|DAA44154.1| TPA: putative two-component response regulator family protein [Zea
mays]
Length = 114
Score = 124 bits (312), Expect = 1e-25, Method: Composition-based stats.
Identities = 58/95 (61%), Positives = 72/95 (75%), Gaps = 6/95 (6%)
Query: 17 GSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRER 76
+R AD FP G++VLVVDDD TCL +L++ML C Y+VTTC QA AL +LRE
Sbjct: 4 AEARGAD------FPVGMKVLVVDDDPTCLVVLKRMLLECRYDVTTCPQATRALTMLREN 57
Query: 77 KGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIT 111
+ FDV++SDVHMPDMDGF+LLE +GLEMDLPVI+
Sbjct: 58 RRGFDVIISDVHMPDMDGFRLLELVGLEMDLPVIS 92
>gi|297806747|ref|XP_002871257.1| hypothetical protein ARALYDRAFT_325337 [Arabidopsis lyrata subsp.
lyrata]
gi|297317094|gb|EFH47516.1| hypothetical protein ARALYDRAFT_325337 [Arabidopsis lyrata subsp.
lyrata]
Length = 625
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 139/295 (47%), Gaps = 59/295 (20%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLY--------NVTTCSQAAVALDILRERKGCFDVVLS 85
+ V+VVDDD L IL +ML R Y V AL L+ ++ D++++
Sbjct: 16 INVMVVDDDRVFLNILSRMLERSKYIDPSVMKITVVAVDDPKKALSTLKIQRDHIDLIIT 75
Query: 86 DVHMPDMDGFKLLEHIGLEM-DLPV-ITDGRVSAVMRGIRHGACDYLIKPIREEELKNIW 143
D +MP M+G +L + I E +LPV + + + GA ++ KPI +L I+
Sbjct: 76 DYYMPSMNGLQLKKQITQEFGNLPVLVMSSDPNKEQESLSCGAMGFIPKPIEPADLTKIY 135
Query: 144 QHVVRKRWNENKEHENSGSLEETDH-----------------------HKRGSDEIEYAS 180
Q + + N S L E +H K+ +
Sbjct: 136 QFALTYKMN-----GKSTLLTEQNHKDANVSVPQQITLIPEQANVLKTKKKNCSSKSDSR 190
Query: 181 SVNE------GTEGTFKAQRKRISAKEEDDGE--LESDDPSTTKKPRVVWSVELHQQFVS 232
+VN T+G+ K ++++ + DDGE L+ KK ++ W+ LH F+
Sbjct: 191 TVNSTNGSCVSTDGSRKNRKRKPNGGPSDDGESLLQP-----AKKKKITWTDSLHDLFLQ 245
Query: 233 AVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 287
A+ +G+DKAVPK+IL MNV LTRENVASH LQK+R++L+R V+ QG
Sbjct: 246 AIRHIGLDKAVPKKILAFMNVSYLTRENVASH-----LQKYRIFLRR---VADQG 292
>gi|125552240|gb|EAY97949.1| hypothetical protein OsI_19867 [Oryza sativa Indica Group]
Length = 315
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 91/143 (63%), Gaps = 4/143 (2%)
Query: 11 SGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVAL 70
+G SS + +A + P G+RVL++D+ T L+I+ ++L C Y VT + A A+
Sbjct: 2 AGSCSVASSNKSKLADEEFSPVGMRVLLIDESTTYLKIITKLLLNCGYKVTPKTAARDAV 61
Query: 71 DILRERKGCFDVVLSDVHMP-DMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGA 126
+ L E +D+VL++VH P +DGF LL++ G +MDLPV+ D V++ + GA
Sbjct: 62 EELHENPWSYDMVLTEVHAPAGIDGFNLLQYAGTDMDLPVVVFSADDDKRTVLKCVNSGA 121
Query: 127 CDYLIKPIREEELKNIWQHVVRK 149
CDYL+KP+R EELKNIWQHV R+
Sbjct: 122 CDYLVKPLRHEELKNIWQHVYRR 144
>gi|388458730|gb|AFK31231.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 108/190 (56%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D +K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLRKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G+T S A
Sbjct: 174 KHGVTLSSTA 183
>gi|303287506|ref|XP_003063042.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas pusilla CCMP1545]
gi|226455678|gb|EEH52981.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas pusilla CCMP1545]
Length = 544
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/100 (64%), Positives = 74/100 (74%), Gaps = 6/100 (6%)
Query: 208 ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQE 267
++DD S KKPRVVWS ELHQQFV+AVNQLGIDKAVPKRIL+LM V GLTRENVASH
Sbjct: 233 DNDDTSGLKKPRVVWSPELHQQFVTAVNQLGIDKAVPKRILDLMGVQGLTRENVASH--- 289
Query: 268 INLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLG 307
LQK+RLYLKRL GV+ G + S A T + + +G
Sbjct: 290 --LQKYRLYLKRLQGVNNNGTVP-SGAAGFMTGLAIDGVG 326
>gi|388458674|gb|AFK31203.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458712|gb|AFK31222.1| Ehd1, partial [Oryza nivara]
gi|388458718|gb|AFK31225.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 107/190 (56%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++++ TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTISTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 174 KHGATLSSTA 183
>gi|388458722|gb|AFK31227.1| Ehd1, partial [Oryza officinalis]
gi|388458744|gb|AFK31238.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 107/190 (56%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++++ TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTISTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 174 KHGATLSSTA 183
>gi|388458740|gb|AFK31236.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 107/190 (56%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPSHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D +K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLRKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 174 KHGATLSSTA 183
>gi|388458692|gb|AFK31212.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 108/189 (57%), Gaps = 16/189 (8%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRG 172
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH---P 61
Query: 173 SDEIEYASSVNEGTEGT-FKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVEL 226
+ A + T T +A + + DD GE+ D K R+ W+ +L
Sbjct: 62 PSILAMARATPATTRSTAIEASLAPLENEVRDDMVNYNGEIT--DIRNLGKSRLTWTTQL 119
Query: 227 HQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQ 286
H+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ + +
Sbjct: 120 HRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTSK 174
Query: 287 GGITNSFCA 295
G+T S A
Sbjct: 175 HGVTLSSTA 183
>gi|388458626|gb|AFK31179.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458628|gb|AFK31180.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458634|gb|AFK31183.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458636|gb|AFK31184.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458640|gb|AFK31186.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458662|gb|AFK31197.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458666|gb|AFK31199.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458684|gb|AFK31208.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458696|gb|AFK31214.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458700|gb|AFK31216.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458702|gb|AFK31217.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458704|gb|AFK31218.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458706|gb|AFK31219.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458756|gb|AFK31244.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458758|gb|AFK31245.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458760|gb|AFK31246.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 107/190 (56%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G+T S A
Sbjct: 174 KHGVTLSSTA 183
>gi|388458720|gb|AFK31226.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 107/190 (56%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++++ TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTISTATEASLAPLENEV----RDDMVNYNGEIM--DIRDLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 174 KHGATLSSTA 183
>gi|449458817|ref|XP_004147143.1| PREDICTED: uncharacterized protein LOC101203501 [Cucumis sativus]
Length = 607
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 141/313 (45%), Gaps = 79/313 (25%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYN-----VTTCSQAAVALDILRERKGCFDVVL 84
F L VL+VD D L+ L +L + YN +TT A++AL +++E+ FD+V+
Sbjct: 15 FAKNLHVLLVDHDPFSLKHLASLLEQQSYNGTVDHITTTQLASIALSMIQEKGDRFDLVM 74
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKN 141
++V MPDMD F L H+ L+M++ VI + +S + + GAC +L KPI +LK
Sbjct: 75 ANVSMPDMDSFSFL-HVLLKMNIAVIFMSSGMNLSVATKALAEGACYFLQKPISRGDLKY 133
Query: 142 IWQHVVRKRWN------------------------------------------------- 152
+WQHV R WN
Sbjct: 134 MWQHVYR--WNRNITKQTYKANCIETAKPRKESVGIQITDAVVLSRSAAAVSYNNNCCIN 191
Query: 153 ----ENKEHENSGSLEETDH-------HKRGSDEIEYASS---VNEGTEGTFKAQRKRIS 198
ENKE + S + D KR SD+IE S V +E T K RI
Sbjct: 192 YKPMENKEKDKSVQIGSHDSLVGSFFGGKRLSDDIEGISREKRVKYYSEPT-KFGFSRID 250
Query: 199 AKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 258
E E S T RVVW+ E ++F A+N+LG DK+ PK IL++MN P LT
Sbjct: 251 EDHERRKEYYIASDSRT---RVVWNAERRRKFTDALNKLG-DKSRPKLILKMMNEPCLTL 306
Query: 259 ENVASHLQEINLQ 271
VA+HLQ+ Q
Sbjct: 307 RQVANHLQKYKAQ 319
>gi|388458622|gb|AFK31177.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 107/190 (56%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G+T S A
Sbjct: 174 KHGVTLSSTA 183
>gi|449503419|ref|XP_004161993.1| PREDICTED: uncharacterized protein LOC101230585 [Cucumis sativus]
Length = 557
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 141/313 (45%), Gaps = 79/313 (25%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYN-----VTTCSQAAVALDILRERKGCFDVVL 84
F L VL+VD D L+ L +L + YN +TT A++AL +++E+ FD+V+
Sbjct: 15 FAKNLHVLLVDHDPFSLKHLASLLEQQSYNGTVDHITTTQLASIALSMIQEKGDRFDLVM 74
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKN 141
++V MPDMD F L H+ L+M++ VI + +S + + GAC +L KPI +LK
Sbjct: 75 ANVSMPDMDSFSFL-HVLLKMNIAVIFMSSGMNLSVATKALAEGACYFLQKPISRGDLKY 133
Query: 142 IWQHVVRKRWN------------------------------------------------- 152
+WQHV R WN
Sbjct: 134 MWQHVYR--WNRNITKQTYKANCIETAKPRKESVGIQITDAVVLSRSAAAVSYNNNCCIN 191
Query: 153 ----ENKEHENSGSLEETDH-------HKRGSDEIEYASS---VNEGTEGTFKAQRKRIS 198
ENKE + S + D KR SD+IE S V +E T K RI
Sbjct: 192 YKPMENKEKDKSVQIGSHDSLVGSFFGGKRLSDDIEGISREKRVKYYSEPT-KFGFSRID 250
Query: 199 AKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 258
E E S T RVVW+ E ++F A+N+LG DK+ PK IL++MN P LT
Sbjct: 251 EDHERRKEYYIASDSRT---RVVWNAERRRKFTDALNKLG-DKSRPKLILKMMNEPCLTL 306
Query: 259 ENVASHLQEINLQ 271
VA+HLQ+ Q
Sbjct: 307 RQVANHLQKYKAQ 319
>gi|388458710|gb|AFK31221.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 107/190 (56%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGGDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G+T S A
Sbjct: 174 KHGVTLSSTA 183
>gi|388458742|gb|AFK31237.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 107/190 (56%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++++ TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTISTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRVQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 174 KHGATLSSTA 183
>gi|388458698|gb|AFK31215.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 107/190 (56%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH--HK 170
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSM 64
Query: 171 RGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKA+PK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAIPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G+T S A
Sbjct: 174 KHGVTLSSTA 183
>gi|388458688|gb|AFK31210.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 107/190 (56%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSILTTS 173
Query: 286 QGGITNSFCA 295
+ G+T S A
Sbjct: 174 KHGVTLSSTA 183
>gi|218184693|gb|EEC67120.1| hypothetical protein OsI_33927 [Oryza sativa Indica Group]
gi|388458618|gb|AFK31175.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 107/188 (56%), Gaps = 19/188 (10%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH--HK 170
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPST 64
Query: 171 RGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKR-LNGVS 284
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ + S
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 285 QQGGITNS 292
+QG +S
Sbjct: 174 KQGATLSS 181
>gi|388458716|gb|AFK31224.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 108/190 (56%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++++ TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTISTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN+LG DKAVPK++L +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNRLGEDKAVPKKMLGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 174 KHGATLSSTA 183
>gi|388458752|gb|AFK31242.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 106/190 (55%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
G+T S A
Sbjct: 174 NHGVTLSSTA 183
>gi|388458714|gb|AFK31223.1| Ehd1, partial [Oryza nivara]
Length = 253
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 108/194 (55%), Gaps = 18/194 (9%)
Query: 109 VITDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 168
+ + G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 169 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 221
A++++ TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTISTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 222 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 281
W+ +LH+QF++AVN LG DKAVPK+IL +M LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKAKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 282 GVSQQGGITNSFCA 295
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|388458694|gb|AFK31213.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 107/190 (56%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD G++ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGQIT--DIRNLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G+T S A
Sbjct: 174 KHGVTLSSTA 183
>gi|388458732|gb|AFK31232.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 106/190 (55%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 174 KHGATLSSTA 183
>gi|388458680|gb|AFK31206.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 106/190 (55%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 174 KHGATLSSAA 183
>gi|388458608|gb|AFK31170.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 106/190 (55%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNSMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 174 KHGATLSSTA 183
>gi|388458612|gb|AFK31172.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458614|gb|AFK31173.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458654|gb|AFK31193.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458660|gb|AFK31196.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458668|gb|AFK31200.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458670|gb|AFK31201.1| Ehd1, partial [Oryza sativa Indica Group]
gi|388458676|gb|AFK31204.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458678|gb|AFK31205.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458682|gb|AFK31207.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458690|gb|AFK31211.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458726|gb|AFK31229.1| Ehd1, partial [Oryza rufipogon]
gi|388458746|gb|AFK31239.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 106/190 (55%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 174 KHGATLSSTA 183
>gi|388458630|gb|AFK31181.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 106/190 (55%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN L DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLAEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G+T S A
Sbjct: 174 KHGVTLSSTA 183
>gi|388458754|gb|AFK31243.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 106/190 (55%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 174 KHGATLSSTA 183
>gi|388458632|gb|AFK31182.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 108/194 (55%), Gaps = 18/194 (9%)
Query: 109 VITDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 168
+ + G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 169 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 221
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLT 114
Query: 222 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 281
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 282 GVSQQGGITNSFCA 295
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|326530738|dbj|BAK01167.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 473
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 64/74 (86%), Gaps = 5/74 (6%)
Query: 210 DDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEIN 269
DD S +KKPRVVWSVELH++FV+AVNQLGIDKAVPKRILELMNV LTRENVASH
Sbjct: 24 DDASASKKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENVASH----- 78
Query: 270 LQKFRLYLKRLNGV 283
LQK+RLYL+RL+ V
Sbjct: 79 LQKYRLYLRRLSAV 92
>gi|22758332|gb|AAN05536.1| putative response regulator protein [Oryza sativa Japonica Group]
gi|222612965|gb|EEE51097.1| hypothetical protein OsJ_31808 [Oryza sativa Japonica Group]
gi|388458638|gb|AFK31185.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458708|gb|AFK31220.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458724|gb|AFK31228.1| Ehd1, partial [Oryza rufipogon]
gi|388458728|gb|AFK31230.1| Ehd1, partial [Oryza rufipogon]
gi|388458736|gb|AFK31234.1| Ehd1, partial [Oryza rufipogon]
gi|388458750|gb|AFK31241.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 106/190 (55%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 174 KHGATLSSTA 183
>gi|388458748|gb|AFK31240.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 108/194 (55%), Gaps = 26/194 (13%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH---- 168
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 169 --HKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 221
R + A++ + TE + + DD GE+ D K R+
Sbjct: 65 LSMARATP----ATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 222 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 281
W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 282 GVSQQGGITNSFCA 295
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|7770351|gb|AAF69721.1|AC016041_26 F27J15.4 [Arabidopsis thaliana]
Length = 612
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 80/125 (64%), Gaps = 3/125 (2%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
QFP VLVVD + T L ++Q++++ Y V+ + A AL L K ++V+ D H
Sbjct: 29 QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFH 88
Query: 89 MPDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
MP +DG + L+ I ++DLPV+ D + +VM+ +GACDY++KP++EE + NIWQH
Sbjct: 89 MPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQH 148
Query: 146 VVRKR 150
+VRKR
Sbjct: 149 IVRKR 153
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 46/63 (73%), Gaps = 6/63 (9%)
Query: 216 KKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILEL---MNVPGLTRENVASHLQE--IN 269
+KPR+ W+ ELHQ+F+ A+ + GI+KA PK ++E M + G+TR NVASHLQ+ IN
Sbjct: 419 RKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQKHRIN 478
Query: 270 LQK 272
L++
Sbjct: 479 LEE 481
>gi|15222067|ref|NP_175345.1| protein response regulator 19 [Arabidopsis thaliana]
gi|332194281|gb|AEE32402.1| protein response regulator 19 [Arabidopsis thaliana]
Length = 608
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 80/125 (64%), Gaps = 3/125 (2%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
QFP VLVVD + T L ++Q++++ Y V+ + A AL L K ++V+ D H
Sbjct: 29 QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFH 88
Query: 89 MPDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
MP +DG + L+ I ++DLPV+ D + +VM+ +GACDY++KP++EE + NIWQH
Sbjct: 89 MPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQH 148
Query: 146 VVRKR 150
+VRKR
Sbjct: 149 IVRKR 153
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQE--INLQK 272
+KPR+ W+ ELHQ+F+ A+ +G + V L+ M + G+TR NVASHLQ+ INL++
Sbjct: 419 RKPRMTWTEELHQKFLEAIEIIGANPKVLVECLQEMRIEGITRSNVASHLQKHRINLEE 477
>gi|334183176|ref|NP_001185179.1| protein response regulator 19 [Arabidopsis thaliana]
gi|332194282|gb|AEE32403.1| protein response regulator 19 [Arabidopsis thaliana]
Length = 622
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 80/125 (64%), Gaps = 3/125 (2%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
QFP VLVVD + T L ++Q++++ Y V+ + A AL L K ++V+ D H
Sbjct: 29 QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFH 88
Query: 89 MPDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
MP +DG + L+ I ++DLPV+ D + +VM+ +GACDY++KP++EE + NIWQH
Sbjct: 89 MPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQH 148
Query: 146 VVRKR 150
+VRKR
Sbjct: 149 IVRKR 153
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 4/55 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILEL---MNVPGLTRENVASHLQ 266
+KPR+ W+ ELHQ+F+ A+ + GI+KA PK ++E M + G+TR NVASHLQ
Sbjct: 419 RKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQ 473
>gi|388458686|gb|AFK31209.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 106/190 (55%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EE NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEEPSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G+T S A
Sbjct: 174 KHGVTLSSTA 183
>gi|110289209|gb|AAP54164.2| myb-like DNA-binding domain, SHAQKYF class family protein [Oryza
sativa Japonica Group]
Length = 256
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 109/190 (57%), Gaps = 15/190 (7%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASHLQ +++ K+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ-VHI-KYRMQLKKSIPTTS 176
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 177 KHGATLSSTA 186
>gi|297847198|ref|XP_002891480.1| hypothetical protein ARALYDRAFT_474061 [Arabidopsis lyrata subsp.
lyrata]
gi|297337322|gb|EFH67739.1| hypothetical protein ARALYDRAFT_474061 [Arabidopsis lyrata subsp.
lyrata]
Length = 530
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 80/124 (64%), Gaps = 3/124 (2%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
QFP VLVVD + T L ++Q++++ Y VT + A AL L K ++V+ D H
Sbjct: 29 QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVTIETDAEKALAYLTSCKHEINIVIWDFH 88
Query: 89 MPDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
MP +DG + L+ IG +MDLPV+ D + +VM+ +GACDY++KP++EE + NIWQH
Sbjct: 89 MPGIDGLQALKSIGSKMDLPVVIMSDDNQTESVMKATINGACDYVVKPVKEEVIANIWQH 148
Query: 146 VVRK 149
+VRK
Sbjct: 149 IVRK 152
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 11/95 (11%)
Query: 208 ESDDPSTTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILEL---MNVPGLTRENVAS 263
E + +KPR+ W+ +LHQ+F+ A+ + GI+KA PK +L+ M V G+TR NVAS
Sbjct: 325 EKKEAKKPRKPRMTWTEDLHQKFLEAIEIVGGIEKANPKVLLDCLLEMKVEGITRSNVAS 384
Query: 264 HLQE--INLQKFRLYLKRLNGVSQQGGITNSFCAP 296
HLQ+ INL++ ++ +Q+ G + ++ P
Sbjct: 385 HLQKHRINLEE-----NQIPEETQEDGWSTAYNRP 414
>gi|388458738|gb|AFK31235.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 106/190 (55%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ +++ + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHENNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 174 KHGATLSSTA 183
>gi|413935897|gb|AFW70448.1| putative two-component response regulator family protein [Zea mays]
Length = 545
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 79/106 (74%), Gaps = 8/106 (7%)
Query: 208 ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQE 267
E+ D S+ KKPRVVWSVELH++FV+AVNQLGIDKAVPK+IL+LMNV +TRENVASH
Sbjct: 116 ENGDSSSQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVENITRENVASH--- 172
Query: 268 INLQKFRLYLKRLNG-VSQQGGITNSFCA--PIETNVKLGSLGRFD 310
LQK+RLYLKRL+ S+Q +T +F P N+ L + +++
Sbjct: 173 --LQKYRLYLKRLSADASRQANLTAAFGGRNPAYVNMGLDAFRQYN 216
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYN 59
DQFP G+RVL VDDD TCL+ILE +L RC Y+
Sbjct: 20 DQFPVGMRVLAVDDDPTCLKILENLLLRCQYH 51
>gi|388458658|gb|AFK31195.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 106/190 (55%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ R++ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFREQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 174 KHGATLSSTA 183
>gi|48210044|gb|AAT40543.1| Putative two-component response regulator protein, identical
[Solanum demissum]
Length = 352
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 53/254 (20%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ +LVV+DD T L ++ +L++C Y V T AL LR + FD+V++DVH D++
Sbjct: 15 ISILVVNDDATYLPVVAGLLKKCNYQVVTVKYPIDALSKLRIKGDSFDLVVTDVHKSDIN 74
Query: 94 GFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 150
GF+L + I ++PV+ D + +++G++ + D
Sbjct: 75 GFELQQVITQAFEIPVLLMSADDKEGTILKGLKGVSVD---------------------- 112
Query: 151 WNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESD 210
+ ++ +L+ KRG + S++ G +G D +
Sbjct: 113 --DQRDQGPCTALQV----KRGKKPVPGKSAMKLGKQGK--------------DNSVNFV 152
Query: 211 DPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINL 270
P+ K +++W+ LH F+ A++ +G DKAVPK+I E M VPGL+RENVASH
Sbjct: 153 LPT---KSQIIWTDSLHNTFLEAISNIGFDKAVPKKIHEHMKVPGLSRENVASH-----W 204
Query: 271 QKFRLYLKRLNGVS 284
QK+R+YL+R+ S
Sbjct: 205 QKYRIYLRRVTDAS 218
>gi|388458656|gb|AFK31194.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 106/190 (55%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ +K+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFQKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 174 KHGATLSSTA 183
>gi|50400707|sp|Q9ZVD3.2|ARR13_ARATH RecName: Full=Putative two-component response regulator ARR13
Length = 572
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 132/276 (47%), Gaps = 37/276 (13%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLY---NVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
+ V+VVDD+ L I +ML + Y V AL L+ ++ D++++D +MP
Sbjct: 16 INVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRDNIDLIITDYYMP 75
Query: 91 DMDGFKLLEHIGLEM-DLPV-ITDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 148
M+G +L + I E +L V + + + GA ++ KPI +L I+Q +
Sbjct: 76 GMNGLQLKKQITQEFGNLSVLVMSSDPNKEEESLSCGAMGFIPKPIAPTDLPKIYQFALT 135
Query: 149 KRWN--------ENKEHENSGSLEET----------DHHKRGSDEIEYASSVNE------ 184
+ N +N++ N ++ K+ +VN
Sbjct: 136 YKRNGKSTLSTEQNQKDANVSVPQQIMLVPEQAYVLKTKKKNCSSKSDTRTVNSTNVSHV 195
Query: 185 GTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVP 244
T G+ K ++++ DDGE S P KK ++ W+ L F+ A+ +G DK VP
Sbjct: 196 STNGSRKNRKRKPKGGPSDDGESLSQPP---KKKKIWWTNPLQDLFLQAIQHIGYDKVVP 252
Query: 245 KRILELMNVPGLTRENVASHLQEINLQKFRLYLKRL 280
K+IL +MNVP LTRENVASH LQK+RL++KR+
Sbjct: 253 KKILAIMNVPYLTRENVASH-----LQKYRLFVKRV 283
>gi|15225844|ref|NP_180275.1| putative two-component response regulator ARR13 [Arabidopsis
thaliana]
gi|3885337|gb|AAC77865.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|330252838|gb|AEC07932.1| putative two-component response regulator ARR13 [Arabidopsis
thaliana]
Length = 575
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 132/276 (47%), Gaps = 37/276 (13%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLY---NVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
+ V+VVDD+ L I +ML + Y V AL L+ ++ D++++D +MP
Sbjct: 16 INVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRDNIDLIITDYYMP 75
Query: 91 DMDGFKLLEHIGLEM-DLPV-ITDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 148
M+G +L + I E +L V + + + GA ++ KPI +L I+Q +
Sbjct: 76 GMNGLQLKKQITQEFGNLSVLVMSSDPNKEEESLSCGAMGFIPKPIAPTDLPKIYQFALT 135
Query: 149 KRWN--------ENKEHENSGSLEET----------DHHKRGSDEIEYASSVNE------ 184
+ N +N++ N ++ K+ +VN
Sbjct: 136 YKRNGKSTLSTEQNQKDANVSVPQQIMLVPEQAYVLKTKKKNCSSKSDTRTVNSTNVSHV 195
Query: 185 GTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVP 244
T G+ K ++++ DDGE S P KK ++ W+ L F+ A+ +G DK VP
Sbjct: 196 STNGSRKNRKRKPKGGPSDDGESLSQPP---KKKKIWWTNPLQDLFLQAIQHIGYDKVVP 252
Query: 245 KRILELMNVPGLTRENVASHLQEINLQKFRLYLKRL 280
K+IL +MNVP LTRENVASH LQK+RL++KR+
Sbjct: 253 KKILAIMNVPYLTRENVASH-----LQKYRLFVKRV 283
>gi|388458672|gb|AFK31202.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 105/190 (55%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ R + ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRTQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 174 KHGATLSSTA 183
>gi|388458734|gb|AFK31233.1| Ehd1, partial [Oryza rufipogon]
Length = 253
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 106/190 (55%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL ++ V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIIKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 174 KHGATLSSTA 183
>gi|388458610|gb|AFK31171.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 107/190 (56%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
+ A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LATARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLTWTAQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 174 KHGATLSSTA 183
>gi|345286269|gb|AEN79457.1| B-type response regulator, partial [Oryza sativa]
Length = 159
Score = 114 bits (286), Expect = 1e-22, Method: Composition-based stats.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 111 TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHK 170
+ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 3 SSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPP 62
Query: 171 R--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVELH 227
A++++ TE + + + +GE+ D K R+ W+ +LH
Sbjct: 63 SILAMARATPATTISTATEASLAPLENEVRDDMVNYNGEIT--DIRDLGKSRLTWTTQLH 120
Query: 228 QQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
+QF++AVN LG DKAVPK+IL +M V LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|388458664|gb|AFK31198.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 105/190 (55%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R E L NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEGLSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 174 KHGATLSSTA 183
>gi|388458620|gb|AFK31176.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 107/194 (55%), Gaps = 18/194 (9%)
Query: 109 VITDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH 168
+ + G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 1 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 60
Query: 169 HKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVV 221
A++ + TE + + DD GE+ D K R+
Sbjct: 61 PPSILAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLT 114
Query: 222 WSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 281
W+ +LH+QF++AVN LG DKA PK++L +M V LTRE VASH LQK+R+ LK+
Sbjct: 115 WTTQLHRQFIAAVNHLGEDKAAPKKMLGVMKVKHLTREQVASH-----LQKYRMQLKKSI 169
Query: 282 GVSQQGGITNSFCA 295
+ + G T S A
Sbjct: 170 PTTSKHGATLSSTA 183
>gi|388458616|gb|AFK31174.1| Ehd1, partial [Oryza sativa Indica Group]
Length = 253
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 105/190 (55%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+ EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVGIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 174 KHGATLSSTA 183
>gi|345286297|gb|AEN79471.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 114 bits (285), Expect = 2e-22, Method: Composition-based stats.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 111 TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHK 170
+ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 3 SSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPP 62
Query: 171 R--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVELH 227
A++ + TE + + + +GE+ D +K R+ W+ +LH
Sbjct: 63 SILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEIT--DIRNLRKSRLTWTTQLH 120
Query: 228 QQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
+QF++AVN LG DKAVPK+IL +M V LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|326522516|dbj|BAK07720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 117/255 (45%), Gaps = 40/255 (15%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSD--VHMP 90
GL+VL VDDD LR L Q LRRC Y VT A AL L + FD V++
Sbjct: 20 GLKVLAVDDDPVYLRTLTQTLRRCGYEVTAKPSPAEALKELEKNPDGFDFVMTAALTRGR 79
Query: 91 DMDGFKLLEHIGLEMDLPVITDGRVS--AVMRGIRHGACDYLIKPIREEELKNIWQHVVR 148
MDGF LL IG + ++ G S RG + GAC KP+R+ ++ IWQHV+R
Sbjct: 80 GMDGFDLLNRIGERYPVVILFSGEESMETRRRGTQGGACYLAEKPMRDTQIYMIWQHVLR 139
Query: 149 KRWNEN----------KEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRIS 198
R + G LE+T KRG VN+ +G
Sbjct: 140 WRRENAAGVVAANANPRPSSEGGHLEDTP-RKRG-------RGVNDSGKG---------- 181
Query: 199 AKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL---GIDKAVPKRILELMNVPG 255
K DG +TTKK + W+ E+H+ FVSAV QL G D P I E + V G
Sbjct: 182 -KGASDGGGVQPVTNTTKKKKFEWTSEMHELFVSAVTQLKETGGD--TPNNIREFLEVDG 238
Query: 256 --LTRENVASHLQEI 268
LT V+SHLQ+
Sbjct: 239 IYLTTTQVSSHLQKY 253
>gi|388458642|gb|AFK31187.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458646|gb|AFK31189.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458648|gb|AFK31190.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458650|gb|AFK31191.1| Ehd1, partial [Oryza sativa Japonica Group]
gi|388458652|gb|AFK31192.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 105/190 (55%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN L DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLREDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 174 KHGATLSSTA 183
>gi|388458624|gb|AFK31178.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 106/190 (55%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NI QH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIRQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRNLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G+T S A
Sbjct: 174 KHGVTLSSTA 183
>gi|388458644|gb|AFK31188.1| Ehd1, partial [Oryza sativa Japonica Group]
Length = 253
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 105/190 (55%), Gaps = 18/190 (9%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
A++ + TE + + DD GE+ D K R+ W+ +
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEV----RDDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ 285
LH+QF++AVN L DKAVPK+IL +M V LTRE VASH LQK+R+ LK+ +
Sbjct: 119 LHRQFIAAVNHLREDKAVPKKILGIMKVKHLTREQVASH-----LQKYRMQLKKSIPTTS 173
Query: 286 QGGITNSFCA 295
+ G T S A
Sbjct: 174 KHGATLSSTA 183
>gi|345286299|gb|AEN79472.1| B-type response regulator, partial [Oryza barthii]
Length = 159
Score = 113 bits (283), Expect = 3e-22, Method: Composition-based stats.
Identities = 63/159 (39%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 111 TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHK 170
+ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 3 SSGDTNTVMKYVANGASDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPP 62
Query: 171 R--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVELH 227
A++ + TE + + +GE+ D +K R+ W+ +LH
Sbjct: 63 SILAMARATPATTKSTATEALLAPLENEVRDDMVNYNGEIT--DIRDLRKSRLTWTTQLH 120
Query: 228 QQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
+QF++AVN LG DKAVPK+IL +M V LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286275|gb|AEN79460.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286279|gb|AEN79462.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286287|gb|AEN79466.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286289|gb|AEN79467.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286291|gb|AEN79468.1| B-type response regulator, partial [Oryza rufipogon]
gi|345286293|gb|AEN79469.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 113 bits (282), Expect = 4e-22, Method: Composition-based stats.
Identities = 63/159 (39%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 111 TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHK 170
+ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 3 SSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPP 62
Query: 171 R--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVELH 227
A++ + TE + + + +GE+ D K R+ W+ +LH
Sbjct: 63 SILAMARATPATTRSTATEASLAPLENEVRYDMVNYNGEIT--DIRDLGKSRLTWTTQLH 120
Query: 228 QQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
+QF++AVN LG DKAVPK+IL +M V LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286281|gb|AEN79463.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 111 TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHK 170
+ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 3 SSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPP 62
Query: 171 R--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVELH 227
A++ + TE + + + +GE+ D K R+ W+ +LH
Sbjct: 63 SILAMARATPATTRSTATEASLSPLENEVRYDMVNYNGEI--TDIRDLGKSRLTWTTQLH 120
Query: 228 QQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
+QF++AVN LG DKAVPK+IL +M V LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286261|gb|AEN79453.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
gi|345286295|gb|AEN79470.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 112 bits (281), Expect = 5e-22, Method: Composition-based stats.
Identities = 63/159 (39%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 111 TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHK 170
+ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 3 SSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPP 62
Query: 171 R--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVELH 227
A++ + TE + + + +GE+ D K R+ W+ +LH
Sbjct: 63 SILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEIT--DIRNLGKSRLTWTTQLH 120
Query: 228 QQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
+QF++AVN LG DKAVPK+IL +M V LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286277|gb|AEN79461.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 112 bits (280), Expect = 6e-22, Method: Composition-based stats.
Identities = 62/159 (38%), Positives = 95/159 (59%), Gaps = 5/159 (3%)
Query: 111 TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHK 170
+ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 3 SSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPP 62
Query: 171 R--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVELH 227
A++ + TE + + + +G++ D +K R+ W+ +LH
Sbjct: 63 SILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGKIT--DIRDLRKSRLTWTTQLH 120
Query: 228 QQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
+QF++AVN LG DKAVPK+IL +M V LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286259|gb|AEN79452.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
gi|345286265|gb|AEN79455.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
gi|345286273|gb|AEN79459.1| B-type response regulator, partial [Oryza sativa]
gi|345286285|gb|AEN79465.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 112 bits (280), Expect = 6e-22, Method: Composition-based stats.
Identities = 63/159 (39%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 111 TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHK 170
+ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 3 SSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPP 62
Query: 171 R--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVELH 227
A++ + TE + + + +GE+ D K R+ W+ +LH
Sbjct: 63 SILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEIT--DIRDLGKSRLTWTTQLH 120
Query: 228 QQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
+QF++AVN LG DKAVPK+IL +M V LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286263|gb|AEN79454.1| B-type response regulator, partial [Oryza rufipogon x Oryza sativa]
Length = 159
Score = 112 bits (280), Expect = 6e-22, Method: Composition-based stats.
Identities = 63/159 (39%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 111 TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDH-- 168
+ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 3 SSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPP 62
Query: 169 HKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVELH 227
A++ + TE + + + +GE+ D K R+ W+ +LH
Sbjct: 63 STLAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEIT--DIRDLGKSRLTWTTQLH 120
Query: 228 QQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
+QF++AVN LG DKAVPK+IL +M V LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|413943652|gb|AFW76301.1| hypothetical protein ZEAMMB73_695347 [Zea mays]
Length = 106
Score = 111 bits (277), Expect = 1e-21, Method: Composition-based stats.
Identities = 57/97 (58%), Positives = 71/97 (73%), Gaps = 4/97 (4%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERK---GCFDVVLSD 86
FPAGLRVLVVDDD CL++LE+ L+ C YNV + A AL++LRERK FD+V+SD
Sbjct: 6 FPAGLRVLVVDDDRVCLKVLERQLKCCNYNVMVVTDARTALEMLRERKDDGDQFDLVISD 65
Query: 87 VHMPDMDGFKLLEHIGLEMDLPVITDGRVSAV-MRGI 122
V MP+MDGF+LLE IG+EMDLPVI+ + M GI
Sbjct: 66 VVMPNMDGFELLELIGVEMDLPVISKALALPIFMHGI 102
>gi|345286267|gb|AEN79456.1| B-type response regulator, partial [Oryza sativa]
Length = 159
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 91/157 (57%), Gaps = 5/157 (3%)
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR- 171
G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 5 GDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSI 64
Query: 172 -GSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVELHQQ 229
A++ + TE + + + +GE+ D K R+ W+ +LH+Q
Sbjct: 65 LAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEIT--DIRDLGKSRLTWTTQLHRQ 122
Query: 230 FVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
F++AVN LG DKAVPK IL +M V LTRE VA HLQ
Sbjct: 123 FIAAVNHLGEDKAVPKNILGIMKVKHLTREQVACHLQ 159
>gi|345286271|gb|AEN79458.1| B-type response regulator, partial [Oryza sativa]
Length = 159
Score = 109 bits (272), Expect = 5e-21, Method: Composition-based stats.
Identities = 62/159 (38%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Query: 111 TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHK 170
+ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 3 SSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPP 62
Query: 171 R--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVELH 227
A++ + TE + + + +GE+ D K R+ W+ +LH
Sbjct: 63 SILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEIT--DIRDLGKSRLTWTTQLH 120
Query: 228 QQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
+QF++AVN L DKAVPK+IL +M V LTRE VASHLQ
Sbjct: 121 RQFIAAVNHLREDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|345286283|gb|AEN79464.1| B-type response regulator, partial [Oryza rufipogon]
Length = 159
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 94/161 (58%), Gaps = 9/161 (5%)
Query: 111 TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHK 170
+ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H
Sbjct: 3 SSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH-- 60
Query: 171 RGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD-----GELESDDPSTTKKPRVVWSVE 225
S ++ T +A + + DD GE+ D K R+ W+ +
Sbjct: 61 PPSILAMARATPATTRSTTTEASLAPLENEVRDDMVNYNGEIT--DIRDLGKSRLTWTTQ 118
Query: 226 LHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
LH+QF++AVN LG DKAVPK+IL +M V LTRE VASHLQ
Sbjct: 119 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQ 159
>gi|226875201|gb|ACO88948.1| cytokinin B-type response regulator 5 [Vitis vinifera]
Length = 81
Score = 107 bits (267), Expect = 2e-20, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 63/81 (77%), Gaps = 3/81 (3%)
Query: 42 DITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHI 101
D T L+ILE+ML++CLY VT C A AL++LRERK +D+V+SDV+MPDMDGFKLLE +
Sbjct: 1 DPTWLKILEKMLKKCLYEVTICGLARDALNLLRERKDGYDIVISDVNMPDMDGFKLLELV 60
Query: 102 GLEMDLPVI---TDGRVSAVM 119
GLEMDLPVI DG S VM
Sbjct: 61 GLEMDLPVIMMSVDGETSRVM 81
>gi|303284239|ref|XP_003061410.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
gi|226456740|gb|EEH54040.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
Length = 344
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 61/84 (72%), Gaps = 5/84 (5%)
Query: 200 KEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRE 259
K DGE E+ TKK R+VW+ ELH +F+SAVN LGI AVPK IL+LMNV G+TRE
Sbjct: 43 KRVSDGEKEATSGRATKKRRLVWTPELHVRFMSAVNHLGITNAVPKTILQLMNVEGMTRE 102
Query: 260 NVASHLQEINLQKFRLYLKRLNGV 283
NVASH LQK+RLYLKRL GV
Sbjct: 103 NVASH-----LQKYRLYLKRLAGV 121
>gi|414589528|tpg|DAA40099.1| TPA: hypothetical protein ZEAMMB73_417245 [Zea mays]
Length = 899
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 3/86 (3%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQ---AAVALDILRERKGCFDVVL 84
DQFP G+RVL VDDD TCL++LE +L RC Y+ T+ + ++LRE+K FD V+
Sbjct: 89 DQFPVGMRVLAVDDDPTCLKVLENLLFRCQYHGTSPDNNGPGSHCPELLREKKDQFDPVI 148
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVI 110
S+VHMPDMDGFKLLE +GLEMDLP I
Sbjct: 149 SNVHMPDMDGFKLLELVGLEMDLPGI 174
>gi|414589529|tpg|DAA40100.1| TPA: hypothetical protein ZEAMMB73_417245 [Zea mays]
Length = 443
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 3/86 (3%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQ---AAVALDILRERKGCFDVVL 84
DQFP G+RVL VDDD TCL++LE +L RC Y+ T+ + ++LRE+K FD V+
Sbjct: 89 DQFPVGMRVLAVDDDPTCLKVLENLLFRCQYHGTSPDNNGPGSHCPELLREKKDQFDPVI 148
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVI 110
S+VHMPDMDGFKLLE +GLEMDLP I
Sbjct: 149 SNVHMPDMDGFKLLELVGLEMDLPGI 174
>gi|255570679|ref|XP_002526294.1| hypothetical protein RCOM_0577360 [Ricinus communis]
gi|223534375|gb|EEF36083.1| hypothetical protein RCOM_0577360 [Ricinus communis]
Length = 549
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 125/265 (47%), Gaps = 62/265 (23%)
Query: 72 ILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACD 128
+++E+KG F + +++ +MPDMD +LL H L+ D+PVI ++ V A + I GA
Sbjct: 1 MVQEQKGRFKLAMANANMPDMDSLELL-HALLDKDIPVILISSETSVFAARKAIAEGASF 59
Query: 129 YLIKPIREEELKNIWQHVVRKRWN-----------------------------EN--KEH 157
L +PI ++L+ +WQH R R N EN KE
Sbjct: 60 ILHEPISIDDLRYVWQHAYRNRRNAADQTQNETCQEKENGSNISQYPVIQETTENACKED 119
Query: 158 ENSGSLEET-----------------DHHKRGSDEIEYASSVNEGTEGTFKAQR-KRISA 199
E G+ +ET +H S+E + + E + QR KR+
Sbjct: 120 EVEGNAKETYALIEKDCSKTLENTITEHSMTDSNEKQGVEKIKRRNEVRHEEQREKRVKI 179
Query: 200 KEEDDGE---------LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILEL 250
E++ + S+ ++ RV+W+ ELH +F +A++ LG KA PK ILE+
Sbjct: 180 IFEEENHKWKKTIIEEEIEEKSSSDRRSRVLWTPELHLKFTAAISALGDKKARPKPILEM 239
Query: 251 MNVPGLTRENVASHLQEINLQKFRL 275
MNVP LT+ VASHLQ+ Q R+
Sbjct: 240 MNVPHLTQRQVASHLQKYKSQVRRI 264
>gi|449455086|ref|XP_004145284.1| PREDICTED: uncharacterized protein LOC101216423 [Cucumis sativus]
gi|449470904|ref|XP_004153145.1| PREDICTED: uncharacterized protein LOC101205712 [Cucumis sativus]
gi|449525506|ref|XP_004169758.1| PREDICTED: uncharacterized LOC101205712 [Cucumis sativus]
Length = 336
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 75/114 (65%), Gaps = 14/114 (12%)
Query: 183 NEGTE---GTFKAQRKRISAKEEDDGELESD----DPS--TTKKPRVVWSVELHQQFVSA 233
+E TE G+ + +++ EE D L +D DPS T K+PR+VW+ +LH++FV
Sbjct: 114 DEATERDAGSDSRKLRKVDCAEEADSALRTDNSMDDPSARTLKRPRLVWTPQLHKRFVDV 173
Query: 234 VNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 287
V LGI AVPK I++LMNV GLTRENVASH LQK+RLYLKR+ G S +G
Sbjct: 174 VAHLGIKNAVPKTIMQLMNVEGLTRENVASH-----LQKYRLYLKRMQGSSNEG 222
>gi|297746038|emb|CBI16094.3| unnamed protein product [Vitis vinifera]
Length = 395
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 71/103 (68%), Gaps = 9/103 (8%)
Query: 189 TFKAQRKRISAKEEDDGELES--DDPS--TTKKPRVVWSVELHQQFVSAVNQLGIDKAVP 244
+F +R R A+ + E+ DDPS T K+PR+VW+ +LH++FV V LGI AVP
Sbjct: 199 SFNEERNREPAEADSAMRTENSNDDPSARTLKRPRLVWTPQLHKRFVDVVGHLGIKNAVP 258
Query: 245 KRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 287
K I++LMNV GLTRENVASH LQK+RLYLKR+ G+S +G
Sbjct: 259 KTIMQLMNVEGLTRENVASH-----LQKYRLYLKRMQGLSNEG 296
>gi|225434873|ref|XP_002283159.1| PREDICTED: uncharacterized protein LOC100253567 [Vitis vinifera]
Length = 311
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 72/106 (67%), Gaps = 11/106 (10%)
Query: 188 GTFKAQRKRISAKEEDDGELES----DDPS--TTKKPRVVWSVELHQQFVSAVNQLGIDK 241
G+ + +++ EE D + + DDPS T K+PR+VW+ +LH++FV V LGI
Sbjct: 112 GSESRKVRKVDCAEEADSAMRTENSNDDPSARTLKRPRLVWTPQLHKRFVDVVGHLGIKN 171
Query: 242 AVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 287
AVPK I++LMNV GLTRENVASH LQK+RLYLKR+ G+S +G
Sbjct: 172 AVPKTIMQLMNVEGLTRENVASH-----LQKYRLYLKRMQGLSNEG 212
>gi|147860003|emb|CAN81044.1| hypothetical protein VITISV_006762 [Vitis vinifera]
Length = 362
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 72/106 (67%), Gaps = 11/106 (10%)
Query: 188 GTFKAQRKRISAKEEDDGELES----DDPS--TTKKPRVVWSVELHQQFVSAVNQLGIDK 241
G+ + +++ EE D + + DDPS T K+PR+VW+ +LH++FV V LGI
Sbjct: 163 GSESRKVRKVDCAEEADSAMRTENSNDDPSARTLKRPRLVWTPQLHKRFVDVVGHLGIKN 222
Query: 242 AVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 287
AVPK I++LMNV GLTRENVASH LQK+RLYLKR+ G+S +G
Sbjct: 223 AVPKTIMQLMNVEGLTRENVASH-----LQKYRLYLKRMQGLSNEG 263
>gi|255559022|ref|XP_002520534.1| DNA binding protein, putative [Ricinus communis]
gi|223540376|gb|EEF41947.1| DNA binding protein, putative [Ricinus communis]
Length = 316
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 70/101 (69%), Gaps = 13/101 (12%)
Query: 195 KRISAKEEDDGELESD-----DPSTT---KKPRVVWSVELHQQFVSAVNQLGIDKAVPKR 246
+RI + EE D L ++ DP+T K+PR+VW+ +LH++FV V LGI AVPK
Sbjct: 125 RRIDSGEEADSALRTENLTGEDPATARTLKRPRLVWTPQLHKRFVDVVAYLGIKNAVPKT 184
Query: 247 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 287
I++LMNV GLTRENVASH LQK+RLYLKR+ G+S +G
Sbjct: 185 IMQLMNVEGLTRENVASH-----LQKYRLYLKRMQGLSSEG 220
>gi|242093584|ref|XP_002437282.1| hypothetical protein SORBIDRAFT_10g024170 [Sorghum bicolor]
gi|241915505|gb|EER88649.1| hypothetical protein SORBIDRAFT_10g024170 [Sorghum bicolor]
Length = 158
Score = 102 bits (255), Expect = 5e-19, Method: Composition-based stats.
Identities = 58/118 (49%), Positives = 73/118 (61%), Gaps = 11/118 (9%)
Query: 18 SSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERK 77
+++ + D FPAGLRVL V+ D C +ILE+ L+ C YN T + A ALD+LRERK
Sbjct: 17 AAKTGEEMAADTFPAGLRVLAVEHDRVCSKILERQLKYCNYNATMVTNAQTALDMLRERK 76
Query: 78 ---GCFDVVLSDVHM--PDMDGFKLLEHIGLEMDLPVITD------GRVSAVMRGIRH 124
FD+V+S+V M P+MDGFKLLE IGLEMDLPVI G + RG H
Sbjct: 77 EYGNQFDLVISNVAMPKPNMDGFKLLELIGLEMDLPVINSEVATRGGNCMSAARGGNH 134
>gi|412992495|emb|CCO18475.1| predicted protein [Bathycoccus prasinos]
Length = 1199
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 79/124 (63%), Gaps = 7/124 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ VLVVDD+ C + Q+LR+C Y VTTC A A+++LR R F+++L+DV MPD+D
Sbjct: 51 IHVLVVDDERICRAVTSQVLRKCGYRVTTCESGAEAIELLR-RGTEFNLLLTDVMMPDID 109
Query: 94 GFKLLEHIGLE---MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G KLL+H+ LPVI + V +R GA DYL+KP+ +++K +WQHV
Sbjct: 110 GPKLLQHVRHHSQFSQLPVIMMSANQHSEIVFECVRSGADDYLLKPVTVKQVKLLWQHVW 169
Query: 148 RKRW 151
RK++
Sbjct: 170 RKQY 173
>gi|168032210|ref|XP_001768612.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680111|gb|EDQ66550.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 185
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 70/107 (65%), Gaps = 10/107 (9%)
Query: 190 FKAQRKRISAKEEDDG-----ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVP 244
FK ++ +AK+ D G E + T K+PR+VW+ +LH++FV AV LGI AVP
Sbjct: 74 FKERKDAGNAKDTDSGGGPVNSNEETNARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVP 133
Query: 245 KRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITN 291
K I++LMNV GLTRENVASH LQK+RLYLKR+ G+S G N
Sbjct: 134 KTIMQLMNVEGLTRENVASH-----LQKYRLYLKRMQGLSSDGPPAN 175
>gi|15232597|ref|NP_190248.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|79314533|ref|NP_001030823.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|6523067|emb|CAB62334.1| putative protein [Arabidopsis thaliana]
gi|30102630|gb|AAP21233.1| At3g46640 [Arabidopsis thaliana]
gi|71067050|dbj|BAE16277.1| PHYTOCLOCK 1 [Arabidopsis thaliana]
gi|110743672|dbj|BAE99673.1| hypothetical protein [Arabidopsis thaliana]
gi|332644665|gb|AEE78186.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|332644666|gb|AEE78187.1| protein phytoclock 1 [Arabidopsis thaliana]
Length = 323
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Query: 199 AKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 258
A EE D E T K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLTR
Sbjct: 126 AAEEGDSGTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTR 185
Query: 259 ENVASHLQEINLQKFRLYLKRLNGVSQQG 287
ENVASH LQK+RLYLKR+ G++ +G
Sbjct: 186 ENVASH-----LQKYRLYLKRMQGLTNEG 209
>gi|334185766|ref|NP_001190022.1| protein phytoclock 1 [Arabidopsis thaliana]
gi|332644667|gb|AEE78188.1| protein phytoclock 1 [Arabidopsis thaliana]
Length = 324
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Query: 199 AKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 258
A EE D E T K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLTR
Sbjct: 126 AAEEGDSGTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTR 185
Query: 259 ENVASHLQEINLQKFRLYLKRLNGVSQQG 287
ENVASH LQK+RLYLKR+ G++ +G
Sbjct: 186 ENVASH-----LQKYRLYLKRMQGLTNEG 209
>gi|116787129|gb|ABK24384.1| unknown [Picea sitchensis]
Length = 274
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 70/99 (70%), Gaps = 11/99 (11%)
Query: 195 KRISAKEEDDG-----ELESDDPS-TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRIL 248
KRI +EE+ E ++P+ T K+PR+VW+ +LH++FV AV LGI AVPK I+
Sbjct: 71 KRIELEEEESSVGGVTENVGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIM 130
Query: 249 ELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 287
+LMNV GLTRENVASH LQK+RLYLKR+ G+S +G
Sbjct: 131 QLMNVEGLTRENVASH-----LQKYRLYLKRMQGLSSEG 164
>gi|297815826|ref|XP_002875796.1| hypothetical protein ARALYDRAFT_485038 [Arabidopsis lyrata subsp.
lyrata]
gi|297321634|gb|EFH52055.1| hypothetical protein ARALYDRAFT_485038 [Arabidopsis lyrata subsp.
lyrata]
Length = 325
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 63/90 (70%), Gaps = 5/90 (5%)
Query: 198 SAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLT 257
+A EE D E T K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLT
Sbjct: 126 AAAEEGDSGTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLT 185
Query: 258 RENVASHLQEINLQKFRLYLKRLNGVSQQG 287
RENVASH LQK+RLYLKR+ G++ +G
Sbjct: 186 RENVASH-----LQKYRLYLKRMQGLTNEG 210
>gi|303283678|ref|XP_003061130.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
gi|226457481|gb|EEH54780.1| g2-like myb-family transcription factor [Micromonas pusilla
CCMP1545]
Length = 532
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 67/103 (65%), Gaps = 8/103 (7%)
Query: 190 FKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILE 249
FK R+ + D E DD K+PR+VW+ LH++FV AV+ LGI AVPK I++
Sbjct: 229 FKRSREEAMSHHLDGSE---DDAQALKRPRLVWTPPLHKRFVDAVSHLGIRNAVPKTIMQ 285
Query: 250 LMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNS 292
LMNV GLTRENVASH LQK+RLYLKRL+G + + NS
Sbjct: 286 LMNVDGLTRENVASH-----LQKYRLYLKRLHGGCSESTMENS 323
>gi|255086767|ref|XP_002509350.1| g2-like myb-family transcription factor [Micromonas sp. RCC299]
gi|226524628|gb|ACO70608.1| g2-like myb-family transcription factor [Micromonas sp. RCC299]
Length = 306
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 55/68 (80%), Gaps = 5/68 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KKPR+VW+ ELH +F++AVN LGI AVPK IL+LMNV G+TRENVASH LQK+RL
Sbjct: 58 KKPRLVWTPELHMRFMNAVNHLGIKNAVPKTILQLMNVEGMTRENVASH-----LQKYRL 112
Query: 276 YLKRLNGV 283
YLKRL GV
Sbjct: 113 YLKRLAGV 120
>gi|302757555|ref|XP_002962201.1| hypothetical protein SELMODRAFT_36646 [Selaginella moellendorffii]
gi|300170860|gb|EFJ37461.1| hypothetical protein SELMODRAFT_36646 [Selaginella moellendorffii]
Length = 187
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 58/74 (78%), Gaps = 5/74 (6%)
Query: 214 TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 273
T K+PR+VW+ +LH++FV AV LGI AVPK I++LMNV GLTRENVASH LQK+
Sbjct: 105 TLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVEGLTRENVASH-----LQKY 159
Query: 274 RLYLKRLNGVSQQG 287
RLYLKR+ G+S +G
Sbjct: 160 RLYLKRMQGLSSEG 173
>gi|449456441|ref|XP_004145958.1| PREDICTED: two-component response regulator-like PRR95-like
[Cucumis sativus]
Length = 696
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 86/147 (58%), Gaps = 9/147 (6%)
Query: 14 SGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL 73
SG+G + +P LRVL+V+ D + +I+ +LR+C Y V A +IL
Sbjct: 44 SGFGIGIKWERFLPKMM---LRVLLVEADDSTRQIITALLRKCCYRVAAVPDGLKAWEIL 100
Query: 74 RERKGCFDVVLSDVHMPDMDGFKLLEHI-GLEM--DLPVI---TDGRVSAVMRGIRHGAC 127
+ER D++L++V +P + GF LL I G E ++PVI ++ +S V + + GA
Sbjct: 101 KERPRNVDLILAEVELPSISGFALLTLIMGHETCKNIPVIMMSSEDSISTVYKCMMKGAA 160
Query: 128 DYLIKPIREEELKNIWQHVVRKRWNEN 154
DYL+KP+R EL+N+WQHV R++ + N
Sbjct: 161 DYLVKPLRRNELRNLWQHVWRRQASSN 187
>gi|449497396|ref|XP_004160390.1| PREDICTED: two-component response regulator-like PRR95-like
[Cucumis sativus]
Length = 696
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 86/147 (58%), Gaps = 9/147 (6%)
Query: 14 SGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL 73
SG+G + +P LRVL+V+ D + +I+ +LR+C Y V A +IL
Sbjct: 44 SGFGIGIKWERFLPKMM---LRVLLVEADDSTRQIITALLRKCCYRVAAVPDGLKAWEIL 100
Query: 74 RERKGCFDVVLSDVHMPDMDGFKLLEHI-GLEM--DLPVI---TDGRVSAVMRGIRHGAC 127
+ER D++L++V +P + GF LL I G E ++PVI ++ +S V + + GA
Sbjct: 101 KERPRNVDLILAEVELPSISGFALLTLIMGHETCKNIPVIMMSSEDSISTVYKCMMKGAA 160
Query: 128 DYLIKPIREEELKNIWQHVVRKRWNEN 154
DYL+KP+R EL+N+WQHV R++ + N
Sbjct: 161 DYLVKPLRRNELRNLWQHVWRRQASSN 187
>gi|84570633|dbj|BAE72701.1| pseudo-response regulator 59 homologue [Lemna gibba]
Length = 496
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 78/122 (63%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + I+ +LR+C Y+V + + A DI++E+ FD++LS+V +P
Sbjct: 57 LRVLLVEPDDSTRHIVTALLRKCSYHVASVADGIKAWDIVKEKNFNFDIILSEVEVPSFS 116
Query: 94 GFKLLEHI-GLEM--DLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I G E+ +PVI + VS V + ++ GA D+L+KP+R+ EL+N+WQHV
Sbjct: 117 GISLLTKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDFLVKPVRKNELRNLWQHVW 176
Query: 148 RK 149
R+
Sbjct: 177 RR 178
>gi|222424975|dbj|BAH20438.1| AT3G46640 [Arabidopsis thaliana]
Length = 323
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Query: 199 AKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 258
A EE D E T K+PR+VW+ +LH++FV V LGI AVPK I+++MNV GLTR
Sbjct: 126 AAEEGDSGTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQVMNVEGLTR 185
Query: 259 ENVASHLQEINLQKFRLYLKRLNGVSQQG 287
ENVASH LQK+RLYLKR+ G++ +G
Sbjct: 186 ENVASH-----LQKYRLYLKRMQGLTNEG 209
>gi|168009969|ref|XP_001757677.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690953|gb|EDQ77317.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 197
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 58/78 (74%), Gaps = 5/78 (6%)
Query: 214 TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 273
T K+PR+VW+ +LH++FV AV LGI AVPK I++LMNV GLTRENVASH LQK+
Sbjct: 112 TLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMNVEGLTRENVASH-----LQKY 166
Query: 274 RLYLKRLNGVSQQGGITN 291
RLYLKR+ G+ G + N
Sbjct: 167 RLYLKRMQGLPSDGPMAN 184
>gi|18407171|ref|NP_566085.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
gi|52783231|sp|Q8L500.2|APRR9_ARATH RecName: Full=Two-component response regulator-like APRR9; AltName:
Full=Pseudo-response regulator 9
gi|9247022|gb|AAF86253.1|AF272040_1 timing of CAB expression 1-like protein [Arabidopsis thaliana]
gi|10281000|dbj|BAB13741.1| pseudo-response regulator 9 [Arabidopsis thaliana]
gi|20197322|gb|AAC33497.2| expressed protein [Arabidopsis thaliana]
gi|62320652|dbj|BAD95319.1| hypothetical protein [Arabidopsis thaliana]
gi|330255660|gb|AEC10754.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
Length = 468
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 88/149 (59%), Gaps = 8/149 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V S A ++L+E+ D++L+++ +P +
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSIS 96
Query: 94 GFKLL----EHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
GF LL EH + ++PVI + + V++ + GA DYLIKP+R+ ELKN+WQHV
Sbjct: 97 GFALLALVMEHEACK-NIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHV 155
Query: 147 VRKRWNENKEHENSGSLEETDHHKRGSDE 175
R+ + ++ SL + H+ +DE
Sbjct: 156 WRRLTLRDDPTAHAQSLPASQHNLEDTDE 184
>gi|255080498|ref|XP_002503829.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
gi|226519096|gb|ACO65087.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
Length = 1414
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 87/146 (59%), Gaps = 9/146 (6%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
PA + VL+VDDD C ++ ML++C Y VTT S A+ +L ER F+++L+DV MP
Sbjct: 6 PADVHVLLVDDDRVCRTLVAGMLKKCNYQVTTASSGEEAMALL-ERGTQFNLLLTDVMMP 64
Query: 91 DMDGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
D+DG LL ++ ++PV+ ++ VM IR GA DYL+KP+ ++ +K++W
Sbjct: 65 DVDGPTLLHYVRNNPFYQEMPVVMMSSNEHADTVMNCIRLGAEDYLLKPVTKKAVKHMWA 124
Query: 145 HVVRK--RWNENKEHENSGSLEETDH 168
HV R+ R+ + EN + E D+
Sbjct: 125 HVWRRKQRYQMVPQFENGHEVVEDDY 150
>gi|168009967|ref|XP_001757676.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690952|gb|EDQ77316.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 193
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 58/78 (74%), Gaps = 5/78 (6%)
Query: 214 TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 273
T K+PR+VW+ +LH++FV AV LGI AVPK I++LMNV GLTRENVASH LQK+
Sbjct: 108 TLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMNVEGLTRENVASH-----LQKY 162
Query: 274 RLYLKRLNGVSQQGGITN 291
RLYLKR+ G+ G + N
Sbjct: 163 RLYLKRMQGLPSDGPMAN 180
>gi|356538978|ref|XP_003537977.1| PREDICTED: putative two-component response regulator ARR21-like
[Glycine max]
Length = 323
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 70/101 (69%), Gaps = 9/101 (8%)
Query: 191 KAQRK-RISAKEEDDGELESD---DPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKR 246
+ QRK A EE D ++++ + + K+PR+VW+ +LH++FV V LGI AVPK
Sbjct: 114 RKQRKIDCGAAEEADSAVQTETSAERTAVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKT 173
Query: 247 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 287
I++LMNV GLTRENVASH LQK+RLYLKR+ G+S +G
Sbjct: 174 IMQLMNVEGLTRENVASH-----LQKYRLYLKRMQGLSNEG 209
>gi|297793511|ref|XP_002864640.1| hypothetical protein ARALYDRAFT_496092 [Arabidopsis lyrata subsp.
lyrata]
gi|297310475|gb|EFH40899.1| hypothetical protein ARALYDRAFT_496092 [Arabidopsis lyrata subsp.
lyrata]
Length = 280
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 72/115 (62%), Gaps = 10/115 (8%)
Query: 177 EYASSVNEGTEGTFKAQRKR-----ISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFV 231
E+ V + G+ ++K+ + EE D E T+K+PR+VW+ +LH++FV
Sbjct: 86 EFVDRVGSSSPGSDPKKQKKSGGGEAAVAEEGDSGTEDASGRTSKRPRLVWTPQLHKRFV 145
Query: 232 SAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQ 286
V LGI AVPK I++LMNV GLTRENVASH LQK+RLYLKR+ G++ +
Sbjct: 146 DVVAHLGIKNAVPKTIMQLMNVEGLTRENVASH-----LQKYRLYLKRIQGLTTE 195
>gi|15238463|ref|NP_200765.1| myb family transcription factor [Arabidopsis thaliana]
gi|8885561|dbj|BAA97491.1| unnamed protein product [Arabidopsis thaliana]
gi|26449790|dbj|BAC42018.1| ARR1 like protein [Arabidopsis thaliana]
gi|71067052|dbj|BAE16278.1| putative transcription factor [Arabidopsis thaliana]
gi|109946485|gb|ABG48421.1| At5g59570 [Arabidopsis thaliana]
gi|332009824|gb|AED97207.1| myb family transcription factor [Arabidopsis thaliana]
Length = 298
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Query: 198 SAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLT 257
S EE D E T+K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLT
Sbjct: 122 STAEEGDSGPEDASGKTSKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLT 181
Query: 258 RENVASHLQEINLQKFRLYLKRLNGVSQQ 286
RENVASH LQK+RLYLKR+ G++ +
Sbjct: 182 RENVASH-----LQKYRLYLKRIQGLTTE 205
>gi|21593668|gb|AAM65635.1| ARR1 protein-like [Arabidopsis thaliana]
Length = 298
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Query: 198 SAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLT 257
S EE D E T+K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLT
Sbjct: 122 STAEEGDSGPEDASGKTSKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLT 181
Query: 258 RENVASHLQEINLQKFRLYLKRLNGVSQQ 286
RENVASH LQK+RLYLKR+ G++ +
Sbjct: 182 RENVASH-----LQKYRLYLKRIQGLTTE 205
>gi|77548762|gb|ABA91559.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 699
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 76/122 (62%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +++ +LR+C Y V + A ++RER FD+VL++V MP +
Sbjct: 44 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWGVMRERAYAFDLVLTEVTMPTLS 103
Query: 94 GFKLLEHIGLE---MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G +LL I ++PVI + + V+R ++ GA D+L+KP+R+ EL+N+WQHV
Sbjct: 104 GIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCMQKGAVDFLVKPVRKNELRNLWQHVW 163
Query: 148 RK 149
R+
Sbjct: 164 RR 165
>gi|255079068|ref|XP_002503114.1| predicted protein [Micromonas sp. RCC299]
gi|226518380|gb|ACO64372.1| predicted protein [Micromonas sp. RCC299]
Length = 585
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 57/78 (73%), Gaps = 5/78 (6%)
Query: 208 ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQE 267
E D K+PR+VW+ LH++FV AV+ LGI AVPK I++LMNV GLTRENVASH
Sbjct: 234 EDDHAHALKRPRLVWTPPLHKRFVDAVSHLGIKNAVPKTIMQLMNVEGLTRENVASH--- 290
Query: 268 INLQKFRLYLKRLNGVSQ 285
LQK+RLYLKRL G S+
Sbjct: 291 --LQKYRLYLKRLQGCSE 306
>gi|71067056|dbj|BAE16280.1| NbPCL1 [Nicotiana benthamiana]
Length = 312
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 61/85 (71%), Gaps = 5/85 (5%)
Query: 203 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 262
DD +S + K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLTRENVA
Sbjct: 123 DDSNNKSASKTLNKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVA 182
Query: 263 SHLQEINLQKFRLYLKRLNGVSQQG 287
SH LQK+RLYLKR+ G+S +G
Sbjct: 183 SH-----LQKYRLYLKRMQGLSNEG 202
>gi|384252785|gb|EIE26260.1| hypothetical protein COCSUDRAFT_64410 [Coccomyxa subellipsoidea
C-169]
Length = 428
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 95/179 (53%), Gaps = 13/179 (7%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRER-KGCFDVVLSDVHMPDMDG 94
VL+ +DD LRI+EQ+L++C Y VT ALDIL+ K CFD++L+D+ MP +DG
Sbjct: 15 VLLAEDDDLTLRIVEQLLKQCNYRVTVARNGQEALDILQHNDKHCFDLILTDIMMPKVDG 74
Query: 95 FKLLEHIG---LEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 148
L+ + + LPVI ++ A+ + GA DYLIKPIR+ E+ +W H+ R
Sbjct: 75 MDLVCEVNQRKVWSHLPVIVMSSEQSQEAICKAFTVGAADYLIKPIRKNEVATLWHHIWR 134
Query: 149 KRW---NENKEHENSGSLEETDHHK-RGSDEIEYASSVNEGTEGTFK--AQRKRISAKE 201
K EN E +G + H + ++ AS + GT + AQR + K+
Sbjct: 135 KVMAAGTENLEGHAAGWISAKYRHDVLSAASLDAASIPQQCATGTAECDAQRAALPPKK 193
>gi|356502956|ref|XP_003520280.1| PREDICTED: two-component response regulator ARR14-like [Glycine
max]
Length = 260
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 69/112 (61%), Gaps = 17/112 (15%)
Query: 214 TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 273
T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH LQK+
Sbjct: 80 TLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH-----LQKY 134
Query: 274 RLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQTL 325
RLYLKR+ G+S GG+ A T+ L AS +PP L
Sbjct: 135 RLYLKRMQGLSAGGGVGRVASADPTTD------------RLFASSPVPPHFL 174
>gi|297824763|ref|XP_002880264.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
gi|297326103|gb|EFH56523.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
Length = 476
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 88/149 (59%), Gaps = 8/149 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V S A ++L+E+ D++L+++ +P +
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSIS 96
Query: 94 GFKLL----EHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
GF LL EH + ++PVI + + V++ + GA DYLIKP+R+ ELKN+WQHV
Sbjct: 97 GFALLALVMEHEACK-NIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHV 155
Query: 147 VRKRWNENKEHENSGSLEETDHHKRGSDE 175
R+ + ++ SL + H+ +DE
Sbjct: 156 WRRLTLRDDPTAHAQSLPGSQHNLEDTDE 184
>gi|357472859|ref|XP_003606714.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|357472893|ref|XP_003606731.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355507769|gb|AES88911.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355507786|gb|AES88928.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 312
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 7/103 (6%)
Query: 184 EGTEGTFKAQRKRISAKEEDDGELES--DDPSTTKKPRVVWSVELHQQFVSAVNQLGIDK 241
+G+ + RK S EE + E +S T K+PR+VW+ +LH++FV V LGI
Sbjct: 96 DGSGSDSRKHRKIDSVIEEVEAEADSAVRTTETIKRPRLVWTPQLHKRFVDVVAHLGIKN 155
Query: 242 AVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVS 284
AVPK I++LMNV GLTRENVASH LQK+RLYLKR+ G+S
Sbjct: 156 AVPKTIMQLMNVEGLTRENVASH-----LQKYRLYLKRMQGLS 193
>gi|308913674|gb|ADO51647.1| PRR59 [Zea mays]
Length = 695
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 76/122 (62%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V + A +++RER FD+VL++V MP +
Sbjct: 53 LRVLLVEHDDSTRQIVTALLRKCGYRVAAVADGMKAWEVMRERAYDFDLVLTEVAMPSLS 112
Query: 94 GFKLLEHIGLEMD---LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G +LL I + +PVI + + V++ ++ GA D+L+KP+R+ EL N+WQHV
Sbjct: 113 GIQLLSRIAAAAECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVRKNELGNLWQHVW 172
Query: 148 RK 149
R+
Sbjct: 173 RR 174
>gi|224106431|ref|XP_002314163.1| predicted protein [Populus trichocarpa]
gi|222850571|gb|EEE88118.1| predicted protein [Populus trichocarpa]
Length = 210
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 57/74 (77%), Gaps = 5/74 (6%)
Query: 214 TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 273
T K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLTRENVASH LQK+
Sbjct: 128 TLKRPRLVWTPQLHKRFVDVVGHLGIKNAVPKTIMQLMNVEGLTRENVASH-----LQKY 182
Query: 274 RLYLKRLNGVSQQG 287
RLYLKR+ G+S +G
Sbjct: 183 RLYLKRMQGLSSEG 196
>gi|159487595|ref|XP_001701808.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
gi|158281027|gb|EDP06783.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
Length = 610
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 35/154 (22%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL---RERKGCFDVVLSDVHM 89
G V++V+DD CL+++EQ+LR+ Y V+T S A AL +L ++R D++L+D+ M
Sbjct: 5 GFHVVLVEDDNICLKVVEQLLRKLSYRVSTASDGAAALKVLADCKQRGDKVDLILTDILM 64
Query: 90 PDMDGFKLLE---HIGLEMDLPVITDGRV-------------------------SAVMRG 121
P++ GF L+ H D+PV+ G +V++
Sbjct: 65 PEVTGFDLINEVVHGETFADIPVVASGTFLGFGRRTVRTVAWSRCQVMSSQDSQESVLQA 124
Query: 122 IRHGACDYLIKPIREEELKNIWQHVVRKRWNENK 155
+ GA DYLIKPIR+ EL +WQHV W N+
Sbjct: 125 FQAGAADYLIKPIRKNELATLWQHV----WRANR 154
>gi|356542300|ref|XP_003539607.1| PREDICTED: putative two-component response regulator ARR21-like
isoform 1 [Glycine max]
gi|356542302|ref|XP_003539608.1| PREDICTED: putative two-component response regulator ARR21-like
isoform 2 [Glycine max]
Length = 306
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 71/108 (65%), Gaps = 9/108 (8%)
Query: 184 EGTEGTFKAQRK-RISAKEEDDGELESD---DPSTTKKPRVVWSVELHQQFVSAVNQLGI 239
+G+ + QRK EE D + ++ + + K+PR+VW+ +LH++FV V LGI
Sbjct: 106 DGSGSDSRKQRKIDCGVAEEADSAVRTETSAERTAVKRPRLVWTPQLHKRFVDVVAHLGI 165
Query: 240 DKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 287
AVPK I++LMNV GLTRENVASH LQK+RLYLKR+ G+S +G
Sbjct: 166 KNAVPKTIMQLMNVEGLTRENVASH-----LQKYRLYLKRMQGLSNEG 208
>gi|356504655|ref|XP_003521111.1| PREDICTED: uncharacterized protein LOC100815363 [Glycine max]
Length = 312
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 67/91 (73%), Gaps = 10/91 (10%)
Query: 198 SAKEEDDGELES----DDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMN 252
SA+ D GEL S ++P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+
Sbjct: 87 SAEFADSGELGSGTAGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMS 146
Query: 253 VPGLTRENVASHLQEINLQKFRLYLKRLNGV 283
V GLTRENVASH LQK+RLYLKR+ G+
Sbjct: 147 VDGLTRENVASH-----LQKYRLYLKRMQGI 172
>gi|84570627|dbj|BAE72698.1| pseudo-response regulator 59 homologue [Lemna paucicostata]
Length = 501
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 75/122 (61%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D I+ +LR+C Y+V + A DI+ E+ FD++LS+V +P
Sbjct: 73 LRVLLVEPDDCTRHIVTALLRKCSYHVAAVADGIKAWDIVEEKNFNFDIILSEVEVPSFS 132
Query: 94 GFKLLEHI-GLEM--DLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I G E+ +PVI + VS V + ++ GA D+L+KP+R+ EL+N+WQHV
Sbjct: 133 GINLLSKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKGAVDFLVKPVRKNELRNLWQHVW 192
Query: 148 RK 149
R+
Sbjct: 193 RR 194
>gi|357126972|ref|XP_003565161.1| PREDICTED: uncharacterized protein LOC100834697 [Brachypodium
distachyon]
Length = 256
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 61/85 (71%), Gaps = 5/85 (5%)
Query: 203 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 262
D S+ T+K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLTRENVA
Sbjct: 100 DSAAAASELEKTSKRPRMVWNPQLHKRFVDVVAHLGIKSAVPKTIMQLMNVEGLTRENVA 159
Query: 263 SHLQEINLQKFRLYLKRLNGVSQQG 287
SH LQK+RLY+KR+ G+S +G
Sbjct: 160 SH-----LQKYRLYVKRMQGLSNEG 179
>gi|357157434|ref|XP_003577797.1| PREDICTED: two-component response regulator-like PRR95-like,
partial [Brachypodium distachyon]
Length = 681
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 76/122 (62%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +++ +LR+C Y V + A +++R R FD+VL++V MP +
Sbjct: 18 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLTEVDMPTLS 77
Query: 94 GFKLLEHIGLEMD---LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + +PVI + + V+R +++GA D+L+KP+R+ EL+N+WQHV
Sbjct: 78 GIDLLARIVAAHECKNIPVIMMSSQDSIGTVLRCMQNGAVDFLVKPVRKNELRNLWQHVW 137
Query: 148 RK 149
R+
Sbjct: 138 RR 139
>gi|224089929|ref|XP_002308869.1| predicted protein [Populus trichocarpa]
gi|222854845|gb|EEE92392.1| predicted protein [Populus trichocarpa]
Length = 318
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 60/82 (73%), Gaps = 9/82 (10%)
Query: 203 DDGELES----DDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTR 258
D EL S D+P T K+PR+VW+ +LH++FV AV LGI AVPK I++LMNV GLTR
Sbjct: 96 DSSELGSGAAGDEPRTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTR 155
Query: 259 ENVASHLQEINLQKFRLYLKRL 280
ENVASH LQK+RLYLKR+
Sbjct: 156 ENVASH-----LQKYRLYLKRM 172
>gi|444434895|dbj|BAM77022.1| PHYTOCLOCK 1 [Triticum monococcum subsp. aegilopoides]
Length = 285
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 69/107 (64%), Gaps = 12/107 (11%)
Query: 188 GTFKAQRKRISAKEEDDG-------ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGID 240
G+F + + +A ED G E + + TK+ R+VW+ +LH++FV V LGI
Sbjct: 100 GSFPSFPGKGAAAGEDSGNRDNNSAESAGEKAAATKRARLVWTPQLHKRFVEVVAHLGIK 159
Query: 241 KAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 287
AVPK I++LMNV GLTRENVASH LQK+RLY+KR+ G+S +G
Sbjct: 160 SAVPKTIMQLMNVEGLTRENVASH-----LQKYRLYVKRMQGLSNEG 201
>gi|326491043|dbj|BAK05621.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 250
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 100/219 (45%), Gaps = 33/219 (15%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSD--VHMP 90
GL+VL VDDD LR L Q LRRC Y VT A AL L + FD V++
Sbjct: 20 GLKVLAVDDDPVYLRTLTQTLRRCGYEVTAKPSPAEALKELEKNPDGFDFVMTAALTRGR 79
Query: 91 DMDGFKLLEHIGLEMDLPVITDGRVS--AVMRGIRHGACDYLIKPIREEELKNIWQHVVR 148
MDGF LL IG + ++ G S RG + GAC KP+R+ ++ IWQHV+R
Sbjct: 80 GMDGFDLLNRIGERYPVVILFSGEESMETRRRGTQGGACYLAEKPMRDTQIYMIWQHVLR 139
Query: 149 KRWNEN----------KEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRIS 198
R + G LE+T KRG VN+ +G
Sbjct: 140 WRRENAAGVVAANANPRPSSEGGHLEDTP-RKRG-------RGVNDSGKG---------- 181
Query: 199 AKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL 237
K DG +TTKK + W+ E+H+ FVSAV QL
Sbjct: 182 -KGASDGGGVQPVTNTTKKKKFEWTSEMHELFVSAVTQL 219
>gi|168027173|ref|XP_001766105.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
gi|162682748|gb|EDQ69164.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
Length = 1056
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V+DD ++ +LR C Y VT + ++A +L E FD+VL+DV MP +
Sbjct: 306 LKVLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAWGLLEEANSNFDLVLTDVVMPYLS 365
Query: 94 GFKLLEHIGLE---MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL + +P++ + + V R + GACDYL+KP+R+ ELKN+WQHV
Sbjct: 366 GVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKNELKNLWQHVW 425
Query: 148 RK 149
RK
Sbjct: 426 RK 427
>gi|115480333|ref|NP_001063760.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|68565887|sp|Q689G6.1|PRR95_ORYSJ RecName: Full=Two-component response regulator-like PRR95; AltName:
Full=Pseudo-response regulator 95; Short=OsPRR95
gi|51571881|dbj|BAD38857.1| pseudo-response regulator 95 [Oryza sativa Japonica Group]
gi|52075943|dbj|BAD46023.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|52077226|dbj|BAD46270.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|113631993|dbj|BAF25674.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|215695172|dbj|BAG90363.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695375|dbj|BAG90566.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641971|gb|EEE70103.1| hypothetical protein OsJ_30112 [Oryza sativa Japonica Group]
Length = 623
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+ + D + I+ +LR+C Y V S A DIL+E+ D+VL++V +P M
Sbjct: 43 VRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMS 102
Query: 94 GFKLLEHIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
GF LL I +E D +PVI ++ VS V + + GA D+L+KPIR+ EL+N+WQHV
Sbjct: 103 GFLLLSTI-MEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 161
Query: 147 VRKR 150
RK+
Sbjct: 162 WRKQ 165
>gi|218196749|gb|EEC79176.1| hypothetical protein OsI_19863 [Oryza sativa Indica Group]
Length = 385
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 59 NVTTCSQAAVALDILRERKGCFDVVLSDVHMP-DMDGFKLLEHIGLEMDLPVIT---DGR 114
NVT + A A++ L E +D+VL++VH P +DGF LL++ G +MDLPV+ D
Sbjct: 5 NVTPKTAARDAVEELHENPWSYDMVLTEVHAPAGIDGFNLLQYAGTDMDLPVVVFSADDD 64
Query: 115 VSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 150
V++ + GACDYL+KP+R EELKNIWQHV R++
Sbjct: 65 KRTVLKCVNSGACDYLVKPLRHEELKNIWQHVYRRK 100
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 107 LPVITDGR-VSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEE 165
L V ++G V VMR + +GACDY++KP+ E +K IW+HV+R R + + +S SL+
Sbjct: 143 LLVFSEGEDVVMVMRTVMNGACDYMVKPMTSEAIKFIWKHVLRWRLSALPANASS-SLQP 201
Query: 166 TDH 168
+DH
Sbjct: 202 SDH 204
>gi|218202508|gb|EEC84935.1| hypothetical protein OsI_32150 [Oryza sativa Indica Group]
Length = 623
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+ + D + I+ +LR+C Y V S A DIL+E+ D+VL++V +P M
Sbjct: 43 VRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMS 102
Query: 94 GFKLLEHIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
GF LL I +E D +PVI ++ VS V + + GA D+L+KPIR+ EL+N+WQHV
Sbjct: 103 GFLLLSTI-MEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 161
Query: 147 VRKR 150
RK+
Sbjct: 162 WRKQ 165
>gi|226497556|ref|NP_001141486.1| uncharacterized protein LOC100273598 [Zea mays]
gi|194704770|gb|ACF86469.1| unknown [Zea mays]
gi|414886440|tpg|DAA62454.1| TPA: hypothetical protein ZEAMMB73_402220 [Zea mays]
Length = 629
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 76/124 (61%), Gaps = 8/124 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+ + D + ++ +LR+C Y V S A D+L+E+ D+VL++V +P M
Sbjct: 43 VRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDLLKEKSFNVDLVLTEVELPLMS 102
Query: 94 GFKLLEHIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
GF LL I +E D +PVI + VS V + + GA D+L+KPIR+ EL+N+WQHV
Sbjct: 103 GFLLLSTI-MEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 161
Query: 147 VRKR 150
RK+
Sbjct: 162 WRKQ 165
>gi|147820325|emb|CAN73573.1| hypothetical protein VITISV_007446 [Vitis vinifera]
Length = 306
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 65/88 (73%), Gaps = 10/88 (11%)
Query: 198 SAKEEDDGELES----DDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMN 252
SA E D G+L S D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+
Sbjct: 68 SAPEFDSGDLGSGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMS 127
Query: 253 VPGLTRENVASHLQEINLQKFRLYLKRL 280
V GLTRENVASH LQK+RLYLKR+
Sbjct: 128 VDGLTRENVASH-----LQKYRLYLKRM 150
>gi|325910798|dbj|BAJ83829.1| circadian response regulator 2b [Physcomitrella patens subsp.
patens]
Length = 917
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V+DD ++ +LR C Y VT + ++A +L E FD+VL+DV MP +
Sbjct: 186 LKVLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAWGLLEEANSNFDLVLTDVVMPYLS 245
Query: 94 GFKLLEHIGLE---MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL + +P++ + + V R + GACDYL+KP+R+ ELKN+WQHV
Sbjct: 246 GVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYLVKPVRKNELKNLWQHVW 305
Query: 148 RK 149
RK
Sbjct: 306 RK 307
>gi|225440143|ref|XP_002283226.1| PREDICTED: uncharacterized protein LOC100256764 isoform 1 [Vitis
vinifera]
gi|359481436|ref|XP_003632618.1| PREDICTED: uncharacterized protein LOC100256764 isoform 2 [Vitis
vinifera]
Length = 306
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 65/88 (73%), Gaps = 10/88 (11%)
Query: 198 SAKEEDDGELES----DDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMN 252
SA E D G+L S D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+
Sbjct: 68 SAPEFDSGDLGSGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMS 127
Query: 253 VPGLTRENVASHLQEINLQKFRLYLKRL 280
V GLTRENVASH LQK+RLYLKR+
Sbjct: 128 VDGLTRENVASH-----LQKYRLYLKRM 150
>gi|326518812|dbj|BAJ92567.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 687
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 77/122 (63%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +++ +LR+C Y V + A +++R R FD+VL++V+MP +
Sbjct: 38 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLTEVNMPTLS 97
Query: 94 GFKLLEHIGLE---MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I ++PVI + + V++ +++GA D+L+KP+R+ EL+N+WQHV
Sbjct: 98 GIDLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQNGAVDFLVKPVRKNELRNLWQHVW 157
Query: 148 RK 149
R+
Sbjct: 158 RR 159
>gi|224059460|ref|XP_002299857.1| predicted protein [Populus trichocarpa]
gi|222847115|gb|EEE84662.1| predicted protein [Populus trichocarpa]
Length = 186
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 68/111 (61%), Gaps = 10/111 (9%)
Query: 182 VNEGTEGTFKAQRKRISAKEEDDGELESDDPS-----TTKKPRVVWSVELHQQFVSAVNQ 236
+N + FK+ + A E DDPS T K+PR+VW+ +LH++FV V
Sbjct: 62 LNALSSNNFKSFNETTEADSALRTENWVDDPSSAAARTLKRPRLVWTPQLHKRFVDVVGH 121
Query: 237 LGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 287
LG+ AVPK I++ MNV GLTRENVASH LQK+RLYLKR G+S +G
Sbjct: 122 LGMKNAVPKTIMQWMNVEGLTRENVASH-----LQKYRLYLKRKQGLSSEG 167
>gi|357159597|ref|XP_003578497.1| PREDICTED: two-component response regulator-like PRR95-like
[Brachypodium distachyon]
Length = 626
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 78/124 (62%), Gaps = 8/124 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+ + D + ++ +LR+C Y+V S A +IL+E+ D+VL++V +P M
Sbjct: 39 VRVLLAEGDDSTRHVISALLRKCGYHVAAASDGVKAWEILKEKSFNIDLVLTEVELPAMS 98
Query: 94 GFKLL----EHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
GF LL EH + ++PVI ++ VS V + + GA D+L+KPIR+ EL+N+WQHV
Sbjct: 99 GFLLLSTIMEHEACK-NIPVIMMSSNDAVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 157
Query: 147 VRKR 150
RK+
Sbjct: 158 WRKQ 161
>gi|302143985|emb|CBI23090.3| unnamed protein product [Vitis vinifera]
Length = 747
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 76/124 (61%), Gaps = 8/124 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V A ++L+ R D++L++V +P +
Sbjct: 40 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEVLKARPHNIDLILTEVELPSIS 99
Query: 94 GFKLL----EHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
GF LL EH + ++PVI + G ++ V + + GA D+L+KP+R ELKN+WQHV
Sbjct: 100 GFALLTLVMEH-EICKNIPVIMMSSHGSINTVYKCMLRGAADFLVKPVRRNELKNLWQHV 158
Query: 147 VRKR 150
R++
Sbjct: 159 WRRQ 162
>gi|224144059|ref|XP_002336105.1| predicted protein [Populus trichocarpa]
gi|222872755|gb|EEF09886.1| predicted protein [Populus trichocarpa]
Length = 323
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 62/83 (74%), Gaps = 10/83 (12%)
Query: 203 DDGELES----DDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLT 257
D GEL S D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LMNV GLT
Sbjct: 93 DSGELGSGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLT 152
Query: 258 RENVASHLQEINLQKFRLYLKRL 280
RENVASH LQK+RLYLKR+
Sbjct: 153 RENVASH-----LQKYRLYLKRM 170
>gi|226499102|ref|NP_001151536.1| two-component response regulator-like PRR95 [Zea mays]
gi|195647486|gb|ACG43211.1| two-component response regulator-like PRR95 [Zea mays]
Length = 630
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 76/124 (61%), Gaps = 8/124 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+ + D + ++ +LR+C Y V S A DIL+E+ D+VL++V +P M
Sbjct: 44 VRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMS 103
Query: 94 GFKLLEHIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
GF LL I +E D +PVI + VS V + + GA D+L+KP+R+ EL+N+WQHV
Sbjct: 104 GFLLLSTI-MEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPLRKNELRNLWQHV 162
Query: 147 VRKR 150
RK+
Sbjct: 163 WRKQ 166
>gi|359490833|ref|XP_003634174.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 688
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 76/124 (61%), Gaps = 8/124 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V A ++L+ R D++L++V +P +
Sbjct: 40 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEVLKARPHNIDLILTEVELPSIS 99
Query: 94 GFKLL----EHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
GF LL EH + ++PVI + G ++ V + + GA D+L+KP+R ELKN+WQHV
Sbjct: 100 GFALLTLVMEH-EICKNIPVIMMSSHGSINTVYKCMLRGAADFLVKPVRRNELKNLWQHV 158
Query: 147 VRKR 150
R++
Sbjct: 159 WRRQ 162
>gi|224132554|ref|XP_002321349.1| pseudo response regulator [Populus trichocarpa]
gi|222868345|gb|EEF05476.1| pseudo response regulator [Populus trichocarpa]
Length = 687
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 78/125 (62%), Gaps = 9/125 (7%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYN-VTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
LRVL+V+ D + +I+ +LR+C Y V T S A +IL+ER D++L++V +P +
Sbjct: 65 LRVLLVEADDSTRQIIAALLRKCSYKAVATVSDGLKAWEILKERPHNIDLILTEVDLPSV 124
Query: 93 DGFKLL----EHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
G+ LL EH + ++PVI + + V + + GA DYL+KPIR+ EL+N+WQH
Sbjct: 125 SGYALLTLIMEH-EICKNIPVIMMSSQDSIKTVYKCMLRGAADYLVKPIRKNELRNLWQH 183
Query: 146 VVRKR 150
V RK+
Sbjct: 184 VWRKQ 188
>gi|297812633|ref|XP_002874200.1| hypothetical protein ARALYDRAFT_910487 [Arabidopsis lyrata subsp.
lyrata]
gi|297320037|gb|EFH50459.1| hypothetical protein ARALYDRAFT_910487 [Arabidopsis lyrata subsp.
lyrata]
Length = 556
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 74/121 (61%), Gaps = 5/121 (4%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
LRVL+V+ D + +I+ +LR+C Y V A ++L+ + D++L++V +P +
Sbjct: 51 ALRVLLVEADDSTRQIISALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPSI 110
Query: 93 DGFKLLEHIGLEMDL----PVITDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 148
G+ LL I +E D+ PVI+ V+ V + + GA DYL+KP+R EL+N+WQHV R
Sbjct: 111 SGYALLTLI-MEHDICKNIPVISTDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQHVWR 169
Query: 149 K 149
+
Sbjct: 170 R 170
>gi|242060063|ref|XP_002459177.1| hypothetical protein SORBIDRAFT_03g047330 [Sorghum bicolor]
gi|241931152|gb|EES04297.1| hypothetical protein SORBIDRAFT_03g047330 [Sorghum bicolor]
Length = 284
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 57/73 (78%), Gaps = 5/73 (6%)
Query: 215 TKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFR 274
+K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLTRENVASH LQK+R
Sbjct: 141 SKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASH-----LQKYR 195
Query: 275 LYLKRLNGVSQQG 287
LY+KR+ G+S +G
Sbjct: 196 LYVKRMQGLSNEG 208
>gi|242067499|ref|XP_002449026.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
gi|241934869|gb|EES08014.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
Length = 697
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 76/122 (62%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +++ +LR+C Y V + A +++R R FD+VL++V MP +
Sbjct: 55 LRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLTEVAMPSLS 114
Query: 94 GFKLLEHIGLE---MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G +LL I ++PVI + + V++ ++ GA D+L+KP+R+ EL+N+WQHV
Sbjct: 115 GIQLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVRKNELRNLWQHVW 174
Query: 148 RK 149
R+
Sbjct: 175 RR 176
>gi|326523357|dbj|BAJ88719.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 274
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 69/109 (63%), Gaps = 12/109 (11%)
Query: 186 TEGTFKAQRKRISAKEED-------DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLG 238
T G+F + + SA +D + E + TK+ R+VW+ +LH++FV V LG
Sbjct: 90 TGGSFPSFPGKSSAAGDDNNNNSSAESAGEKSAAAATKRARLVWTPQLHKRFVEVVAHLG 149
Query: 239 IDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 287
I AVPK I++LMNV GLTRENVASH LQK+RLY+KR+ G+S +G
Sbjct: 150 IKSAVPKTIMQLMNVEGLTRENVASH-----LQKYRLYVKRMQGLSNEG 193
>gi|312283015|dbj|BAJ34373.1| unnamed protein product [Thellungiella halophila]
Length = 486
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 77/123 (62%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V S A + L+E+ D++L+++ +P +
Sbjct: 41 LRVLLVESDDSTRQIITALLRKCYYKVVAVSDGLAAWETLKEKSHSIDLILTELDLPSIS 100
Query: 94 GFKLLEHIGLE----MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
GF LL + +E ++PVI + ++ V++ + GA DYLIKP+R+ ELKN+WQHV
Sbjct: 101 GFALLALV-MENEACKNIPVIMMSSQDSITLVLKCMLRGAADYLIKPMRKNELKNLWQHV 159
Query: 147 VRK 149
R+
Sbjct: 160 WRR 162
>gi|255552463|ref|XP_002517275.1| DNA binding protein, putative [Ricinus communis]
gi|223543538|gb|EEF45068.1| DNA binding protein, putative [Ricinus communis]
Length = 315
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 60/76 (78%), Gaps = 6/76 (7%)
Query: 210 DDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 268
D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH
Sbjct: 96 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH---- 151
Query: 269 NLQKFRLYLKRLNGVS 284
LQK+RLYLKR+ G+S
Sbjct: 152 -LQKYRLYLKRMQGLS 166
>gi|414590048|tpg|DAA40619.1| TPA: hypothetical protein ZEAMMB73_710468 [Zea mays]
Length = 596
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 76/124 (61%), Gaps = 8/124 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+ + D + ++ +LR+C Y V S A DIL+E+ D+VL++V +P M
Sbjct: 44 VRVLLAEGDDSTRHVISALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMS 103
Query: 94 GFKLLEHIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
GF LL I +E D +PVI + VS V + + GA D+L+KP+R+ EL+N+WQHV
Sbjct: 104 GFLLLSTI-MEHDASKNIPVIMMSSHDSVSMVFKCMLKGASDFLVKPLRKNELRNLWQHV 162
Query: 147 VRKR 150
RK+
Sbjct: 163 WRKQ 166
>gi|157399682|gb|ABV53465.1| pseudo-response regulator 9 [Castanea sativa]
Length = 700
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 78/125 (62%), Gaps = 8/125 (6%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
LR+L+V+ D + +I+ +LR+C Y V S A + L+ R D+VL++V +P +
Sbjct: 38 ALRILLVEADDSTRQIIAALLRKCSYKVAAVSDGLKAWETLKGRPHNIDLVLTEVELPSI 97
Query: 93 DGFKLLEHIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
GF LL I +E D +PVI ++ ++ V++ + GA D+LIKP+R+ EL+N+WQH
Sbjct: 98 SGFALLTLI-MEHDVCKNIPVIMMSSNDAITTVLKCMLKGAADFLIKPVRKNELRNLWQH 156
Query: 146 VVRKR 150
V R++
Sbjct: 157 VWRRQ 161
>gi|168009287|ref|XP_001757337.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691460|gb|EDQ77822.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 212
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 79/136 (58%), Gaps = 15/136 (11%)
Query: 155 KEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD---GELESDD 211
+EH+++G + E+ + DE G+ RK + ED G L + +
Sbjct: 74 QEHDDAGKVPESSYGGPREDESSRGG-------GSTDFGRKMADFELEDANSAGGLMNSN 126
Query: 212 PSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
K+ R+VW+ +LH++FV AV LGI AVPK I++LMNV GLTRENVASH LQ
Sbjct: 127 DEPLKRARLVWTPQLHKRFVEAVGHLGIKNAVPKTIMQLMNVEGLTRENVASH-----LQ 181
Query: 272 KFRLYLKRLNGVSQQG 287
K+RLYLKR+ G+S G
Sbjct: 182 KYRLYLKRMQGLSNDG 197
>gi|449437694|ref|XP_004136626.1| PREDICTED: uncharacterized protein LOC101216059 [Cucumis sativus]
gi|449533272|ref|XP_004173600.1| PREDICTED: uncharacterized LOC101216059 [Cucumis sativus]
Length = 286
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 64/87 (73%), Gaps = 9/87 (10%)
Query: 198 SAKEEDDGELES---DDPS-TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNV 253
SA D G+L S D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V
Sbjct: 66 SADFADSGDLGSGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSV 125
Query: 254 PGLTRENVASHLQEINLQKFRLYLKRL 280
GLTRENVASH LQK+RLYLKR+
Sbjct: 126 DGLTRENVASH-----LQKYRLYLKRM 147
>gi|295913732|gb|ADG58105.1| transcription factor [Lycoris longituba]
Length = 230
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 57/72 (79%), Gaps = 5/72 (6%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLTR+NVASH LQK+RL
Sbjct: 124 KRPRLVWTPQLHKRFVEVVAHLGIKNAVPKTIVQLMNVEGLTRDNVASH-----LQKYRL 178
Query: 276 YLKRLNGVSQQG 287
YLKR++G+S +G
Sbjct: 179 YLKRMSGLSNEG 190
>gi|413949280|gb|AFW81929.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 299
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 58/72 (80%), Gaps = 6/72 (8%)
Query: 210 DDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 268
D+P+ T K+PR+VW+ +LH++FV AV QLGI AVPK I++LM+V GLTRENVASH
Sbjct: 79 DEPARTLKRPRLVWTPQLHKRFVDAVAQLGIKNAVPKTIMQLMSVDGLTRENVASH---- 134
Query: 269 NLQKFRLYLKRL 280
LQK+RLYLKR+
Sbjct: 135 -LQKYRLYLKRM 145
>gi|226875203|gb|ACO88949.1| cytokinin B-type response regulator 6 [Vitis vinifera]
Length = 58
Score = 93.6 bits (231), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/58 (70%), Positives = 47/58 (81%)
Query: 45 CLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIG 102
CL ILE+MLR CLY VT C++A AL +LR K FD+V+SDVHMPDMDGFKLLEHIG
Sbjct: 1 CLMILEKMLRTCLYEVTKCNRAETALSLLRGNKSGFDIVISDVHMPDMDGFKLLEHIG 58
>gi|46981318|gb|AAT07636.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51038102|gb|AAT93905.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215769096|dbj|BAH01325.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 620
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 90/153 (58%), Gaps = 10/153 (6%)
Query: 25 AVPD--QFPAG-----LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVAL-DILRER 76
AVP + PAG L VLVVDDD L L+ ML Y VT + A AL ++ +
Sbjct: 7 AVPPGCKLPAGGFFGRLHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNP 66
Query: 77 KGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVITDGR-VSAVMRGIRHGACDYLIKPIR 135
+ F +V++DVHM MDGF LL I + + + ++G V VMR + +GACDY++KP+
Sbjct: 67 EDYFHIVMTDVHMSGMDGFDLLHRINGRVPVIMFSEGEDVVMVMRTVMNGACDYMVKPMT 126
Query: 136 EEELKNIWQHVVRKRWNENKEHENSGSLEETDH 168
E +K IW+HV+R R + + +S SL+ +DH
Sbjct: 127 SEAIKFIWKHVLRWRLSALPANASS-SLQPSDH 158
>gi|224131058|ref|XP_002320991.1| response regulator [Populus trichocarpa]
gi|222861764|gb|EEE99306.1| response regulator [Populus trichocarpa]
Length = 144
Score = 92.8 bits (229), Expect = 5e-16, Method: Composition-based stats.
Identities = 64/150 (42%), Positives = 84/150 (56%), Gaps = 10/150 (6%)
Query: 72 ILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACD 128
+LRE K FDV+ +D+ M +MDG +LL+ I EMDLPV+ +D V++G+ GACD
Sbjct: 1 MLREDKNRFDVLGNDLQMHEMDGIQLLKIIRSEMDLPVVIISSDDEQELVLKGVLQGACD 60
Query: 129 YLIKPIREEELKNIWQHVVRKRWNENKEH-ENSGSLEETDHHKRGSDEIEYASSVNEGTE 187
LIKP++ E LK WQHVVRK+ N E E EE H S + S N G
Sbjct: 61 CLIKPVKMEALKVFWQHVVRKKINNTLERLEQPIRKEEDKLHLENSCIVSCTVSGNAGHP 120
Query: 188 GTFKAQRKRISAKEEDDGELESDDPSTTKK 217
T K ++I ED+G+ SD ST KK
Sbjct: 121 MTLK---RKIDG--EDEGK-ASDGLSTGKK 144
>gi|222631501|gb|EEE63633.1| hypothetical protein OsJ_18450 [Oryza sativa Japonica Group]
Length = 633
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 90/153 (58%), Gaps = 10/153 (6%)
Query: 25 AVPD--QFPAG-----LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVAL-DILRER 76
AVP + PAG L VLVVDDD L L+ ML Y VT + A AL ++ +
Sbjct: 7 AVPPGCKLPAGGFFGRLHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNP 66
Query: 77 KGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVITDGR-VSAVMRGIRHGACDYLIKPIR 135
+ F +V++DVHM MDGF LL I + + + ++G V VMR + +GACDY++KP+
Sbjct: 67 EDYFHIVMTDVHMSGMDGFDLLHRINGRVPVIMFSEGEDVVMVMRTVMNGACDYMVKPMT 126
Query: 136 EEELKNIWQHVVRKRWNENKEHENSGSLEETDH 168
E +K IW+HV+R R + + +S SL+ +DH
Sbjct: 127 SEAIKFIWKHVLRWRLSALPANASS-SLQPSDH 158
>gi|242093588|ref|XP_002437284.1| hypothetical protein SORBIDRAFT_10g024183 [Sorghum bicolor]
gi|241915507|gb|EER88651.1| hypothetical protein SORBIDRAFT_10g024183 [Sorghum bicolor]
Length = 92
Score = 92.8 bits (229), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/86 (53%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERK--GCFDVVLS 85
D FP GL VL V+DD C ++LE+ L+ YN A + LD+LRERK FD+V+S
Sbjct: 4 DTFPIGLSVLAVEDDCVCCKVLERKLKYYNYNAIMVMNAQMVLDMLRERKDGNWFDLVIS 63
Query: 86 DVHMPDMDGFKLLEHIGLEMDLPVIT 111
+V +P+MDGF LL+ IGLEMDLPV T
Sbjct: 64 NVIIPNMDGFNLLKLIGLEMDLPVTT 89
>gi|356509155|ref|XP_003523317.1| PREDICTED: two-component response regulator-like APRR9-like
[Glycine max]
Length = 655
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 86/150 (57%), Gaps = 8/150 (5%)
Query: 9 QSSGGSGYGSSRAADVAVPDQF--PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQA 66
+ SGGSG + + ++F LRVL+V+ D + +I+ +LR+C Y V
Sbjct: 22 EDSGGSGSKAGEFKGLMRWEKFLPKMVLRVLLVEADDSTRQIIAALLRKCSYKVVAVPDG 81
Query: 67 AVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHI---GLEMDLPVI---TDGRVSAVMR 120
A ++L+ R D++L++V +P + G+ LL I + ++PVI + +S V +
Sbjct: 82 LKAWELLKGRPHNVDLILTEVDLPSISGYALLTLIMEHEICKNIPVIMMSSQDSISTVYK 141
Query: 121 GIRHGACDYLIKPIREEELKNIWQHVVRKR 150
+ GA DYL+KPIR+ EL+N+WQHV R++
Sbjct: 142 CMLRGAADYLVKPIRKNELRNLWQHVWRRQ 171
>gi|357509257|ref|XP_003624917.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|124361203|gb|ABN09175.1| Homeodomain-related [Medicago truncatula]
gi|355499932|gb|AES81135.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 299
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 55/70 (78%), Gaps = 5/70 (7%)
Query: 214 TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 273
T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH LQK+
Sbjct: 88 TLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH-----LQKY 142
Query: 274 RLYLKRLNGV 283
RLYLKR+ G+
Sbjct: 143 RLYLKRMQGI 152
>gi|449532655|ref|XP_004173296.1| PREDICTED: uncharacterized protein LOC101223526, partial [Cucumis
sativus]
Length = 285
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 58/73 (79%), Gaps = 6/73 (8%)
Query: 209 SDDPS-TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQE 267
SD+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH
Sbjct: 72 SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH--- 128
Query: 268 INLQKFRLYLKRL 280
LQK+RLYLKR+
Sbjct: 129 --LQKYRLYLKRM 139
>gi|297806505|ref|XP_002871136.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
gi|297316973|gb|EFH47395.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
Length = 265
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 59/79 (74%), Gaps = 6/79 (7%)
Query: 205 GELESDDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 263
G+ D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVAS
Sbjct: 67 GDSTGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVAS 126
Query: 264 HLQEINLQKFRLYLKRLNG 282
H LQK+RLYLKR+
Sbjct: 127 H-----LQKYRLYLKRMQS 140
>gi|444434897|dbj|BAM77023.1| PHYTOCLOCK 1 [Triticum monococcum subsp. monococcum]
Length = 285
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 67/107 (62%), Gaps = 12/107 (11%)
Query: 188 GTFKAQRKRISAKEEDDG-------ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGID 240
G+F + + A ED G E + + TK+ R+VW+ +LH++FV V LGI
Sbjct: 100 GSFPSFPGKGEAAGEDSGNRDNNSAESAGEKAAATKRARLVWTPQLHKRFVEVVAHLGIK 159
Query: 241 KAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 287
AVPK I++LMNV GLTRENVASH LQK+RLY+KR+ +S +G
Sbjct: 160 SAVPKTIMQLMNVEGLTRENVASH-----LQKYRLYVKRMQCLSNEG 201
>gi|357464211|ref|XP_003602387.1| Two-component response regulator-like PRR73 [Medicago truncatula]
gi|355491435|gb|AES72638.1| Two-component response regulator-like PRR73 [Medicago truncatula]
Length = 685
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 75/124 (60%), Gaps = 8/124 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D +I+ +LR+C Y V + A +IL+ R D++L++V +P +
Sbjct: 56 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRSIDLILTEVDLPAIS 115
Query: 94 GFKLLEHIGLEMDL----PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G+ LL I +E D+ PVI + VS V + + GA DYL+KPIR EL+N+WQHV
Sbjct: 116 GYALLTLI-MEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHV 174
Query: 147 VRKR 150
R++
Sbjct: 175 WRRQ 178
>gi|384246881|gb|EIE20369.1| CheY-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 129
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 80/127 (62%), Gaps = 7/127 (5%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILR-ERKGCFDVVLSDVHM 89
P + +L+VDD+ ++ +LR+C Y VT AL+ILR + G F ++L+DV M
Sbjct: 2 PNDVHILLVDDERLSRVVVGNLLRKCSYKVTEAGSGMEALEILRGQPPGTFSLILTDVMM 61
Query: 90 PDMDGFKLLEHI-GLEM--DLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIW 143
PD+DG +LL H+ G E +LPVI + R V IR GA DYL+KP+ ++E++++W
Sbjct: 62 PDVDGIELLRHVRGDEAWSNLPVIMMSANERTETVFECIRGGAEDYLLKPVTKKEVQHMW 121
Query: 144 QHVVRKR 150
QHV R++
Sbjct: 122 QHVWRRQ 128
>gi|15238416|ref|NP_196128.1| myb family transcription factor [Arabidopsis thaliana]
gi|10178048|dbj|BAB11531.1| unnamed protein product [Arabidopsis thaliana]
gi|20260578|gb|AAM13187.1| unknown protein [Arabidopsis thaliana]
gi|30023728|gb|AAP13397.1| At5g05090 [Arabidopsis thaliana]
gi|332003444|gb|AED90827.1| myb family transcription factor [Arabidopsis thaliana]
Length = 266
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 60/80 (75%), Gaps = 6/80 (7%)
Query: 202 EDDGELESDDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTREN 260
E G+ D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTREN
Sbjct: 65 EIAGDSTGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTREN 124
Query: 261 VASHLQEINLQKFRLYLKRL 280
VASH LQK+RLYLKR+
Sbjct: 125 VASH-----LQKYRLYLKRM 139
>gi|258678906|dbj|BAI39993.1| pseudo-response regulator homolog protein [Physcomitrella patens
subsp. patens]
Length = 907
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LR+L+V+ D ++ +LR C Y VT + ++A +L + FD+VL+DV MP +
Sbjct: 183 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVLTDVVMPRLS 242
Query: 94 GFKLLEHIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL + ++ + +P++ + + V R + GACDYL+KP+R+ EL+N+WQHV
Sbjct: 243 GVGLLSKM-MKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRNLWQHV 301
Query: 147 VRK 149
RK
Sbjct: 302 WRK 304
>gi|325910792|dbj|BAJ83826.1| circadian response regulator 1a [Physcomitrella patens subsp.
patens]
Length = 907
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LR+L+V+ D ++ +LR C Y VT + ++A +L + FD+VL+DV MP +
Sbjct: 183 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVLTDVVMPRLS 242
Query: 94 GFKLLEHIGLE---MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL + +P++ + + V R + GACDYL+KP+R+ EL+N+WQHV
Sbjct: 243 GVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRNLWQHVW 302
Query: 148 RK 149
RK
Sbjct: 303 RK 304
>gi|21537017|gb|AAM61358.1| unknown [Arabidopsis thaliana]
Length = 266
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 60/80 (75%), Gaps = 6/80 (7%)
Query: 202 EDDGELESDDPS-TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTREN 260
E G+ D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTREN
Sbjct: 65 EIAGDSTGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTREN 124
Query: 261 VASHLQEINLQKFRLYLKRL 280
VASH LQK+RLYLKR+
Sbjct: 125 VASH-----LQKYRLYLKRM 139
>gi|84570629|dbj|BAE72699.1| pseudo-response regulator 95 homologue [Lemna paucicostata]
Length = 448
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 9/185 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+V+ D + +I+ +LR+C Y V++ S A L+E D+VL++V +P++
Sbjct: 31 VRVLLVEADDSTRKIVAALLRKCSYKVSSASDGLEAWKTLKESPNNIDLVLTEVELPNVS 90
Query: 94 GFKLLEHIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G+ LL + +E D +PVI + + V + GA D+L+KPIR+ EL+N+WQHV
Sbjct: 91 GYALLSMM-MEHDSCKSIPVIMMSSRDSMKMVFECMLKGAADFLVKPIRKNELRNLWQHV 149
Query: 147 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DG 205
R++ E+ E + S+ Y N +G+ K + S D D
Sbjct: 150 WRRQSANGAENTPPVENETNSEYNSASNHSSYYMDSNHKNKGSEKGNDTQSSCTRPDTDA 209
Query: 206 ELESD 210
E SD
Sbjct: 210 ETSSD 214
>gi|449453151|ref|XP_004144322.1| PREDICTED: uncharacterized protein LOC101216969 [Cucumis sativus]
Length = 301
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 58/73 (79%), Gaps = 6/73 (8%)
Query: 209 SDDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQE 267
SD+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH
Sbjct: 88 SDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH--- 144
Query: 268 INLQKFRLYLKRL 280
LQK+RLYLKR+
Sbjct: 145 --LQKYRLYLKRM 155
>gi|15228370|ref|NP_187687.1| myb family transcription factor [Arabidopsis thaliana]
gi|6630554|gb|AAF19573.1|AC011708_16 unknown protein [Arabidopsis thaliana]
gi|332641430|gb|AEE74951.1| myb family transcription factor [Arabidopsis thaliana]
Length = 335
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 58/77 (75%), Gaps = 6/77 (7%)
Query: 205 GELESDDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 263
G D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVAS
Sbjct: 92 GGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVAS 151
Query: 264 HLQEINLQKFRLYLKRL 280
H LQK+RLYLKR+
Sbjct: 152 H-----LQKYRLYLKRM 163
>gi|355469070|gb|ACU42265.2| pseudo response regulator 59 [Pisum sativum]
Length = 494
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 76/124 (61%), Gaps = 8/124 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D +I+ +LR+C Y V + A +IL+ R FD++L++V +P +
Sbjct: 45 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRNFDLILTEVDLPSVS 104
Query: 94 GFKLLEHIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G+ LL I +E D +PVI + VS V + + GA DYL+KPIR EL+N+WQHV
Sbjct: 105 GYALLSLI-MEHDTCKTIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHV 163
Query: 147 VRKR 150
R++
Sbjct: 164 WRRQ 167
>gi|297829626|ref|XP_002882695.1| hypothetical protein ARALYDRAFT_897268 [Arabidopsis lyrata subsp.
lyrata]
gi|297328535|gb|EFH58954.1| hypothetical protein ARALYDRAFT_897268 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 57/72 (79%), Gaps = 6/72 (8%)
Query: 210 DDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 268
D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH
Sbjct: 93 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH---- 148
Query: 269 NLQKFRLYLKRL 280
LQK+RLYLKR+
Sbjct: 149 -LQKYRLYLKRM 159
>gi|224064372|ref|XP_002301443.1| pseudo response regulator [Populus trichocarpa]
gi|222843169|gb|EEE80716.1| pseudo response regulator [Populus trichocarpa]
Length = 694
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 8/124 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V+ +A + L+ER D++L++V +P +
Sbjct: 44 LRVLLVEADDSTRQIIVALLRKCGYRVSAVPDGLMAWETLKERPHSIDLILTEVELPLIS 103
Query: 94 GFKLLEHIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G+ L + +E D +PVI + +S V++ + G+ D+L+KP+R+ EL+N+WQHV
Sbjct: 104 GYAFLALV-MEHDVCKNIPVIMMSSHDSISVVLKCMLKGSADFLVKPVRKNELRNLWQHV 162
Query: 147 VRKR 150
R++
Sbjct: 163 WRRQ 166
>gi|312282317|dbj|BAJ34024.1| unnamed protein product [Thellungiella halophila]
Length = 325
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 57/72 (79%), Gaps = 6/72 (8%)
Query: 210 DDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 268
D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH
Sbjct: 94 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH---- 149
Query: 269 NLQKFRLYLKRL 280
LQK+RLYLKR+
Sbjct: 150 -LQKYRLYLKRM 160
>gi|255928918|gb|ACU42266.1| pseudo response regulator 59 [Pisum sativum]
Length = 469
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 76/124 (61%), Gaps = 8/124 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D +I+ +LR+C Y V + A +IL+ R FD++L++V +P +
Sbjct: 20 LRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRNFDLILTEVDLPSVS 79
Query: 94 GFKLLEHIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G+ LL I +E D +PVI + VS V + + GA DYL+KPIR EL+N+WQHV
Sbjct: 80 GYALLSLI-MEHDTCKTIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINELRNLWQHV 138
Query: 147 VRKR 150
R++
Sbjct: 139 WRRQ 142
>gi|125552239|gb|EAY97948.1| hypothetical protein OsI_19866 [Oryza sativa Indica Group]
Length = 604
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 90/153 (58%), Gaps = 10/153 (6%)
Query: 25 AVPD--QFPAG-----LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVAL-DILRER 76
AVP + PAG L VLVVDDD L L+ ML Y VT + A AL ++ +
Sbjct: 7 AVPPGCKLPAGGFFGRLHVLVVDDDAAYLEELKLMLLLAGYAVTGKTTAEEALKEVDQNP 66
Query: 77 KGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVITDGR-VSAVMRGIRHGACDYLIKPIR 135
+ F +V++DVHM MDGF LL I + + + ++G V VMR + +GACDY++KP+
Sbjct: 67 EDYFHIVMTDVHMSGMDGFDLLHRINGRVPVIMFSEGEDVVMVMRTVMNGACDYMVKPMT 126
Query: 136 EEELKNIWQHVVRKRWNENKEHENSGSLEETDH 168
E +K IW+HV+R R + + +S SL+ +DH
Sbjct: 127 SEAIKFIWKHVLRWRLSALPANASS-SLQPSDH 158
>gi|281308390|gb|ADA58343.1| pseudo-response regulator 9 [Brassica rapa]
Length = 412
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 78/123 (63%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V+ D + +I+ +L++C Y V S A + L+E+ D++L+++ +P +
Sbjct: 26 LKVLLVESDDSTRQIITALLQKCSYKVVAVSDGLAAWETLKEKSNEIDLILTELDLPAIS 85
Query: 94 GFKLL----EHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
GF LL EH + ++PVI ++ ++ V++ + GA DYLIKP+R+ ELKN+WQHV
Sbjct: 86 GFALLALVMEHEACK-NIPVIMMSSEDSMTMVLKCMLKGAADYLIKPMRKNELKNLWQHV 144
Query: 147 VRK 149
R+
Sbjct: 145 WRR 147
>gi|312283289|dbj|BAJ34510.1| unnamed protein product [Thellungiella halophila]
Length = 270
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 57/72 (79%), Gaps = 6/72 (8%)
Query: 210 DDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 268
D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH
Sbjct: 76 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH---- 131
Query: 269 NLQKFRLYLKRL 280
LQK+RLYLKR+
Sbjct: 132 -LQKYRLYLKRM 142
>gi|413956105|gb|AFW88754.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 743
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 73/122 (59%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V MP +
Sbjct: 83 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVLTEVFMPCLS 142
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + D+PVI T+ +S V + + GA D+L+KP+R+ ELKN+WQHV
Sbjct: 143 GIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 202
Query: 148 RK 149
R+
Sbjct: 203 RR 204
>gi|224121124|ref|XP_002318502.1| pseudo response regulator [Populus trichocarpa]
gi|222859175|gb|EEE96722.1| pseudo response regulator [Populus trichocarpa]
Length = 529
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 76/123 (61%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V + A +IL+ R D++L++V +P +
Sbjct: 65 LRVLLVEADDSTRQIIAALLRKCSYRVVSVPDGLKAWEILKGRPHGIDLILTEVDLPSIS 124
Query: 94 GFKLL----EHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G+ LL EH + ++PVI + +S V + + GA DYL+KP+R+ EL+N+WQHV
Sbjct: 125 GYPLLTIIMEH-EICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPLRKNELRNLWQHV 183
Query: 147 VRK 149
R+
Sbjct: 184 WRR 186
>gi|52783225|sp|Q6LA42.2|APRR5_ARATH RecName: Full=Two-component response regulator-like APRR5; AltName:
Full=Pseudo-response regulator 5
gi|9758535|dbj|BAB08930.1| unnamed protein product [Arabidopsis thaliana]
gi|17063183|gb|AAL32986.1| pseudo-response regulator 5 protein [Arabidopsis thaliana]
gi|23506027|gb|AAN28873.1| At5g24470/T31K7_5 [Arabidopsis thaliana]
Length = 558
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 79/138 (57%), Gaps = 17/138 (12%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
LRVL+V+ D + +I+ +LR+C Y V A ++L+ + D++L++V +P +
Sbjct: 49 ALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPSI 108
Query: 93 DGFKLLEHIGLEMDL----PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
G+ LL I +E D+ PVI T V+ V + + GA DYL+KP+R EL+N+WQH
Sbjct: 109 SGYALLTLI-MEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQH 167
Query: 146 VVRKR---------WNEN 154
V R++ WNE+
Sbjct: 168 VWRRQTSLAPDSFPWNES 185
>gi|125529286|gb|EAY77400.1| hypothetical protein OsI_05389 [Oryza sativa Indica Group]
Length = 238
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 57/74 (77%), Gaps = 5/74 (6%)
Query: 214 TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 273
++K+ R+VW+ +LH++FV V LG+ AVPK I++LMNV GLTRENVASH LQK+
Sbjct: 115 SSKRARLVWTPQLHKRFVEVVAHLGMKNAVPKTIMQLMNVEGLTRENVASH-----LQKY 169
Query: 274 RLYLKRLNGVSQQG 287
RLY+KR+ G+S +G
Sbjct: 170 RLYVKRMQGLSNEG 183
>gi|46371870|gb|AAS90600.1| induced protein MgI1 [Oryza sativa Japonica Group]
Length = 238
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 57/74 (77%), Gaps = 5/74 (6%)
Query: 214 TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 273
++K+ R+VW+ +LH++FV V LG+ AVPK I++LMNV GLTRENVASH LQK+
Sbjct: 115 SSKRARLVWTPQLHKRFVEVVAHLGMKNAVPKTIMQLMNVEGLTRENVASH-----LQKY 169
Query: 274 RLYLKRLNGVSQQG 287
RLY+KR+ G+S +G
Sbjct: 170 RLYVKRMQGLSNEG 183
>gi|226505594|ref|NP_001146641.1| uncharacterized protein LOC100280240 [Zea mays]
gi|219888151|gb|ACL54450.1| unknown [Zea mays]
gi|323388721|gb|ADX60165.1| PseuodARR-B transcription factor [Zea mays]
gi|413956104|gb|AFW88753.1| two-component response regulator-like PRR73 [Zea mays]
Length = 766
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 73/122 (59%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V MP +
Sbjct: 83 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVLTEVFMPCLS 142
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + D+PVI T+ +S V + + GA D+L+KP+R+ ELKN+WQHV
Sbjct: 143 GIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 202
Query: 148 RK 149
R+
Sbjct: 203 RR 204
>gi|357133685|ref|XP_003568454.1| PREDICTED: uncharacterized protein LOC100835635 [Brachypodium
distachyon]
Length = 326
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 57/73 (78%), Gaps = 6/73 (8%)
Query: 210 DDPS-TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 268
D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH
Sbjct: 89 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH---- 144
Query: 269 NLQKFRLYLKRLN 281
LQK+RLYLKR+
Sbjct: 145 -LQKYRLYLKRMQ 156
>gi|357512643|ref|XP_003626610.1| Two-component response regulator-like PRR37 [Medicago truncatula]
gi|87240854|gb|ABD32712.1| Response regulator receiver; CCT [Medicago truncatula]
gi|355501625|gb|AES82828.1| Two-component response regulator-like PRR37 [Medicago truncatula]
Length = 636
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 72/128 (56%), Gaps = 12/128 (9%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P LRVL+V+ D + I+ +LR C Y V A + L+ + D+VL++V +P
Sbjct: 11 PTMLRVLLVEPDDSTRHIISALLRNCGYKVAAVRDGLKAWETLKNKSLDIDLVLTEVDLP 70
Query: 91 DMDGFKLLEHIGLEMD------LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKN 141
+ GF LL I MD +P+I + VS V + + +GA D+LIKP+R EL+N
Sbjct: 71 SISGFSLLTQI---MDHHNCKNIPLIMMSSQDSVSTVFKFMLNGAVDFLIKPVRRNELRN 127
Query: 142 IWQHVVRK 149
+WQHV R+
Sbjct: 128 LWQHVWRR 135
>gi|255548045|ref|XP_002515079.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223545559|gb|EEF47063.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 697
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 76/124 (61%), Gaps = 8/124 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V +A + L++ D++L++V +P +
Sbjct: 41 LRVLLVEADYSTRQIISALLRKCSYRVAAVPDGLMAWETLKDGPNNIDLILTEVDLPLIS 100
Query: 94 GFKLLEHIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G+ LL + +E D +PVI + +S V++ + GA D+LIKP+R ELKN+WQHV
Sbjct: 101 GYALLTLV-MEHDFCKNIPVIMMSSHDSISKVLKCMLKGAADFLIKPVRRNELKNLWQHV 159
Query: 147 VRKR 150
R++
Sbjct: 160 WRRQ 163
>gi|238011812|gb|ACR36941.1| unknown [Zea mays]
gi|408690380|gb|AFU81650.1| G2-like transcription factor, partial [Zea mays subsp. mays]
gi|413945355|gb|AFW78004.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 57/72 (79%), Gaps = 6/72 (8%)
Query: 210 DDPS-TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 268
D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH
Sbjct: 88 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH---- 143
Query: 269 NLQKFRLYLKRL 280
LQK+RLYLKR+
Sbjct: 144 -LQKYRLYLKRM 154
>gi|168065344|ref|XP_001784613.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
gi|162663845|gb|EDQ50588.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
Length = 425
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LR+L+V+ D ++ +LR C Y VT + ++A +L + FD+VL+DV MP +
Sbjct: 12 LRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAWGLLEDANSNFDLVLTDVVMPRLS 71
Query: 94 GFKLLEHIGLE---MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL + +P++ + + V R + GACDYL+KP+R+ EL+N+WQHV
Sbjct: 72 GVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKGACDYLVKPVRKNELRNLWQHVW 131
Query: 148 RK 149
RK
Sbjct: 132 RK 133
>gi|357121369|ref|XP_003562393.1| PREDICTED: two-component response regulator-like PRR37-like
[Brachypodium distachyon]
Length = 660
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 73/122 (59%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+V+ D + +I+ +LR C+Y V A L++ + D+VLS+V MP +
Sbjct: 21 IRVLLVETDDSTRQIVTALLRHCMYQVIPAENGDQAWARLQDMQDNIDLVLSEVVMPGLS 80
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LLE I + D+PVI ++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 81 GISLLEKIMAHNVCKDIPVIMMSSNDAMGTVFKCLSTGAVDFLVKPIRKNELKNLWQHVW 140
Query: 148 RK 149
R+
Sbjct: 141 RR 142
>gi|115463879|ref|NP_001055539.1| Os05g0412000 [Oryza sativa Japonica Group]
gi|50878489|gb|AAT85262.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51038221|gb|AAT94024.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113579090|dbj|BAF17453.1| Os05g0412000 [Oryza sativa Japonica Group]
gi|125552332|gb|EAY98041.1| hypothetical protein OsI_19956 [Oryza sativa Indica Group]
gi|222631588|gb|EEE63720.1| hypothetical protein OsJ_18538 [Oryza sativa Japonica Group]
Length = 331
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 57/72 (79%), Gaps = 6/72 (8%)
Query: 210 DDPS-TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 268
D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH
Sbjct: 102 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH---- 157
Query: 269 NLQKFRLYLKRL 280
LQK+RLYLKR+
Sbjct: 158 -LQKYRLYLKRM 168
>gi|157399680|gb|ABV53464.1| pseudo-response regulator 5 [Castanea sativa]
Length = 698
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 69/118 (58%), Gaps = 6/118 (5%)
Query: 39 VDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLL 98
++ D + +I+ +LR+C Y VT A +ILR R D++L++V +P + GF LL
Sbjct: 67 IEADDSTRQIIGALLRKCSYRVTAVPDGLKAWEILRGRPHNIDLILTEVDLPAISGFALL 126
Query: 99 EHIG---LEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 150
I + ++PVI VS V + + GA DYL+KPIR ELKN+WQHV RK+
Sbjct: 127 TLIAEHEICKNIPVIMMSAQDSVSTVYKCMLRGAADYLVKPIRRNELKNLWQHVWRKQ 184
>gi|356518667|ref|XP_003528000.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 700
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 75/123 (60%), Gaps = 6/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V A ++L+ R D++L++V +P +
Sbjct: 50 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWELLKGRPHNVDLILTEVDLPSVS 109
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G+ LL I + ++PVI + +S V + + GA DYL+KPIR+ EL+N+WQHV
Sbjct: 110 GYALLTLIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKNELRNLWQHVW 169
Query: 148 RKR 150
R++
Sbjct: 170 RRQ 172
>gi|281308386|gb|ADA58341.1| pseudo-response regulator 5a [Brassica rapa]
Length = 497
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 74/125 (59%), Gaps = 8/125 (6%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
LRVL+V+ D + +I+ +LR+C Y V A ++L+ D++L++V +P +
Sbjct: 54 ALRVLLVEADDSTRQIISALLRKCSYRVAAVPDGLKAWEMLKGNPESVDLILAEVDLPSI 113
Query: 93 DGFKLLEHIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
G+ LL I +E D +PVI T V+ V + + GA DYL+KP+R EL+N+WQH
Sbjct: 114 SGYALLTLI-MEHDVCKNIPVIMMSTHDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQH 172
Query: 146 VVRKR 150
V R+R
Sbjct: 173 VWRRR 177
>gi|18420797|ref|NP_568446.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
gi|10281006|dbj|BAB13743.1| pseudo-response regulator 5 [Arabidopsis thaliana]
gi|332005931|gb|AED93314.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
Length = 667
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 79/138 (57%), Gaps = 17/138 (12%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
LRVL+V+ D + +I+ +LR+C Y V A ++L+ + D++L++V +P +
Sbjct: 158 ALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPSI 217
Query: 93 DGFKLLEHIGLEMDL----PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
G+ LL I +E D+ PVI T V+ V + + GA DYL+KP+R EL+N+WQH
Sbjct: 218 SGYALLTLI-MEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQH 276
Query: 146 VVRKR---------WNEN 154
V R++ WNE+
Sbjct: 277 VWRRQTSLAPDSFPWNES 294
>gi|255566892|ref|XP_002524429.1| conserved hypothetical protein [Ricinus communis]
gi|223536313|gb|EEF37964.1| conserved hypothetical protein [Ricinus communis]
Length = 667
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 76/124 (61%), Gaps = 8/124 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V A ++L+ + D++L++V +P +
Sbjct: 44 LRVLLVEADDSTRQIIAALLRKCSYKVAAVPDGLKAWEMLKGKPHNIDLILTEVELPSIS 103
Query: 94 GFKLL----EHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G+ LL EH + ++PVI + VS V + + GA DYL+KPIR+ EL+N+WQHV
Sbjct: 104 GYALLTLIMEH-EICKNIPVIMMSSQDSVSTVYKCMMRGAADYLVKPIRKNELRNLWQHV 162
Query: 147 VRKR 150
R++
Sbjct: 163 WRRQ 166
>gi|384246908|gb|EIE20396.1| hypothetical protein COCSUDRAFT_9894, partial [Coccomyxa
subellipsoidea C-169]
Length = 59
Score = 90.9 bits (224), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 51/64 (79%), Gaps = 5/64 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KKPR+VW+ ELH +F++AV LG+ AVPK IL+LMNV G+TRENVASH LQK+RL
Sbjct: 1 KKPRLVWTAELHARFMNAVTHLGVKHAVPKTILQLMNVEGMTRENVASH-----LQKYRL 55
Query: 276 YLKR 279
YLKR
Sbjct: 56 YLKR 59
>gi|356520227|ref|XP_003528765.1| PREDICTED: two-component response regulator-like PRR95-like isoform
2 [Glycine max]
Length = 722
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 8/124 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V A + L+++ D++L++V +P +
Sbjct: 29 LRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETLKKKAPELDLILTEVELPAIS 88
Query: 94 GFKLLEHIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
GF LL I +E D +PVI + VS ++ + GA D+LIKPIR+ EL+N+WQHV
Sbjct: 89 GFALLSLI-MEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFLIKPIRKNELRNLWQHV 147
Query: 147 VRKR 150
R+
Sbjct: 148 WRRH 151
>gi|356520225|ref|XP_003528764.1| PREDICTED: two-component response regulator-like PRR95-like isoform
1 [Glycine max]
Length = 703
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 8/124 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V A + L+++ D++L++V +P +
Sbjct: 29 LRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETLKKKAPELDLILTEVELPAIS 88
Query: 94 GFKLLEHIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
GF LL I +E D +PVI + VS ++ + GA D+LIKPIR+ EL+N+WQHV
Sbjct: 89 GFALLSLI-MEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFLIKPIRKNELRNLWQHV 147
Query: 147 VRKR 150
R+
Sbjct: 148 WRRH 151
>gi|51980216|gb|AAU20772.1| timing of CAB expression 1 protein [Castanea sativa]
Length = 545
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 72/125 (57%), Gaps = 6/125 (4%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+LV D+D L + +L +C Y VT+ A +D L D++L+++ +P
Sbjct: 30 SKVRILVCDNDAKSLEEVSTLLLKCSYQVTSVRSARQVIDALNAEGANIDIILAELDLPL 89
Query: 92 MDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
G KLL++I + DL PVI VS V++ +R GA DYL+KP+R EL N+W H
Sbjct: 90 AKGMKLLKYINRDNDLRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 149
Query: 146 VVRKR 150
V R+R
Sbjct: 150 VWRRR 154
>gi|326512880|dbj|BAK03347.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 305
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 53/68 (77%), Gaps = 5/68 (7%)
Query: 214 TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 273
T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH LQK+
Sbjct: 87 TLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASH-----LQKY 141
Query: 274 RLYLKRLN 281
RLYLKR+
Sbjct: 142 RLYLKRMQ 149
>gi|334715201|gb|AEG90656.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ VL+V+ D R++ +LR C+Y V + A + L +++ D+VL +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 94 GFKLLEHI---GLEMDLPVI----TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + ++PVI D R + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDAR-NTVFKCLSKGAVDFLVKPIRKNELKNLWQHV 198
Query: 147 VRK 149
R+
Sbjct: 199 WRR 201
>gi|334715199|gb|AEG90655.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ VL+V+ D R++ +LR C+Y V + A + L +++ D+VL +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 94 GFKLLEHI---GLEMDLPVI----TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + ++PVI D R + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDAR-NTVFKCLSKGAVDFLVKPIRKNELKNLWQHV 198
Query: 147 VRK 149
R+
Sbjct: 199 WRR 201
>gi|302796211|ref|XP_002979868.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
gi|300152628|gb|EFJ19270.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
Length = 865
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 8/122 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V+DD + ++ +LR C Y VT + A +IL R D+VL+D+ MP +
Sbjct: 109 LKVLLVEDDDSTRHVVAALLRNCGYEVTPAASGLQAWEILETRSSSVDLVLTDLMMPRLS 168
Query: 94 GFKLLEHIGLEMD----LPVITDG---RVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G +LL I + D +PV+ + V++ + GA D+L+KP+R+ ELKN+WQH
Sbjct: 169 GIELLGKI-MSRDSPKRIPVVMMSCLDSMDVVLKCLSKGAVDFLVKPVRKNELKNLWQHF 227
Query: 147 VR 148
R
Sbjct: 228 WR 229
>gi|67005935|gb|AAY62604.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + I+ +L+ C Y VT A IL + K C D+VL++V MP
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123
Query: 94 GF----KLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G K++ H L+ ++PVI + + V + + +GA D+L+KPIR+ ELKN+WQHV
Sbjct: 124 GTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHV 182
Query: 147 VRK 149
R+
Sbjct: 183 WRR 185
>gi|18424319|ref|NP_568919.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|334188506|ref|NP_001190574.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|52783244|sp|Q9LVG4.1|APRR3_ARATH RecName: Full=Two-component response regulator-like APRR3; AltName:
Full=Pseudo-response regulator 3
gi|8777349|dbj|BAA96939.1| unnamed protein product [Arabidopsis thaliana]
gi|10281008|dbj|BAB13744.1| pseudo-response regulator 3 [Arabidopsis thaliana]
gi|225879138|dbj|BAH30639.1| hypothetical protein [Arabidopsis thaliana]
gi|332009893|gb|AED97276.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009894|gb|AED97277.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 495
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + I+ +L+ C Y VT A IL + K C D+VL++V MP
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123
Query: 94 GF----KLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G K++ H L+ ++PVI + + V + + +GA D+L+KPIR+ ELKN+WQHV
Sbjct: 124 GTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHV 182
Query: 147 VRK 149
R+
Sbjct: 183 WRR 185
>gi|334715203|gb|AEG90657.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ VL+V+ D R++ +LR C+Y V + A + L +++ D+VL +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 94 GFKLLEHI---GLEMDLPVI----TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + ++PVI D R + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDAR-NTVFKCLSKGAVDFLVKPIRKNELKNLWQHV 198
Query: 147 VRK 149
R+
Sbjct: 199 WRR 201
>gi|115442515|ref|NP_001045537.1| Os01g0971800 [Oryza sativa Japonica Group]
gi|15289981|dbj|BAB63676.1| induced protein MgI1 [Oryza sativa Japonica Group]
gi|71067054|dbj|BAE16279.1| putative transcription factor [Oryza sativa Japonica Group]
gi|113535068|dbj|BAF07451.1| Os01g0971800 [Oryza sativa Japonica Group]
gi|125573476|gb|EAZ14991.1| hypothetical protein OsJ_04927 [Oryza sativa Japonica Group]
Length = 238
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 55/72 (76%), Gaps = 5/72 (6%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
K+ R+VW+ +LH++FV V LG+ AVPK I++LMNV GLTRENVASH LQK+RL
Sbjct: 117 KRARLVWTPQLHKRFVEVVAHLGMKNAVPKTIMQLMNVEGLTRENVASH-----LQKYRL 171
Query: 276 YLKRLNGVSQQG 287
Y+KR+ G+S +G
Sbjct: 172 YVKRMQGLSNEG 183
>gi|296089013|emb|CBI38716.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 75/123 (60%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V S A + L+ D++L++V +P +
Sbjct: 3 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSIS 62
Query: 94 GFKLLEHIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
GF LL I +E D +PVI + +S V++ + GA D+L+KP+R+ EL+N+WQHV
Sbjct: 63 GFALLSLI-MEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELRNLWQHV 121
Query: 147 VRK 149
R+
Sbjct: 122 WRR 124
>gi|356571269|ref|XP_003553801.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 695
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V A + L+ + D++L++V +P +
Sbjct: 33 LRVLLVEADDSTRQIIAALLRKCGYKVVAFCDGLKAWETLKNKAFDLDLILTEVDLPSIS 92
Query: 94 GFKLLEHIGLEMDL----PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
GF LL I +E D+ PVI + VS V + + GA D+LIKP+R+ EL+N+WQHV
Sbjct: 93 GFSLLTLI-MEHDICKNIPVIMMSSHDSVSMVFKCMLKGAADFLIKPVRKNELRNLWQHV 151
Query: 147 VRK 149
R+
Sbjct: 152 WRR 154
>gi|108707546|gb|ABF95341.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 745
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + D+PVI ++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 148 RK 149
R+
Sbjct: 201 RR 202
>gi|67005937|gb|AAY62605.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + I+ +L+ C Y +T A IL + K C D+VL++V MP
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEITAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123
Query: 94 GF----KLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G K++ H L+ ++PVI + + V + + +GA D+L+KPIR+ ELKN+WQHV
Sbjct: 124 GTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHV 182
Query: 147 VRK 149
R+
Sbjct: 183 WRR 185
>gi|413951204|gb|AFW83853.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 219
Score = 89.7 bits (221), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/70 (60%), Positives = 55/70 (78%), Gaps = 5/70 (7%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 272
++ ++PR+VW+ +LH++FV V LGI KAVPK I+ELMNV GLTRENVASH LQK
Sbjct: 112 NSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIMELMNVEGLTRENVASH-----LQK 166
Query: 273 FRLYLKRLNG 282
+RLY+KR+ G
Sbjct: 167 YRLYVKRMRG 176
>gi|334188508|ref|NP_001190575.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009895|gb|AED97278.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 522
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + I+ +L+ C Y VT A IL + K C D+VL++V MP
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123
Query: 94 GF----KLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G K++ H L+ ++PVI + + V + + +GA D+L+KPIR+ ELKN+WQHV
Sbjct: 124 GTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHV 182
Query: 147 VRK 149
R+
Sbjct: 183 WRR 185
>gi|225453624|ref|XP_002266192.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 641
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 75/123 (60%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V S A + L+ D++L++V +P +
Sbjct: 51 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSIS 110
Query: 94 GFKLLEHIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
GF LL I +E D +PVI + +S V++ + GA D+L+KP+R+ EL+N+WQHV
Sbjct: 111 GFALLSLI-MEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELRNLWQHV 169
Query: 147 VRK 149
R+
Sbjct: 170 WRR 172
>gi|115452319|ref|NP_001049760.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|122247198|sp|Q10N34.1|PRR73_ORYSJ RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
gi|51571879|dbj|BAD38856.1| pseudo-response regulator 73 [Oryza sativa Japonica Group]
gi|108707543|gb|ABF95338.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
gi|113548231|dbj|BAF11674.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|222624693|gb|EEE58825.1| hypothetical protein OsJ_10396 [Oryza sativa Japonica Group]
Length = 767
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + D+PVI ++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 148 RK 149
R+
Sbjct: 201 RR 202
>gi|226531730|ref|NP_001147359.1| ARR1 protein-like [Zea mays]
gi|195610500|gb|ACG27080.1| ARR1 protein-like [Zea mays]
Length = 219
Score = 89.4 bits (220), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/70 (60%), Positives = 55/70 (78%), Gaps = 5/70 (7%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 272
++ ++PR+VW+ +LH++FV V LGI KAVPK I+ELMNV GLTRENVASH LQK
Sbjct: 112 NSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIIELMNVEGLTRENVASH-----LQK 166
Query: 273 FRLYLKRLNG 282
+RLY+KR+ G
Sbjct: 167 YRLYVKRMRG 176
>gi|24796813|gb|AAN64489.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
Length = 789
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + D+PVI ++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 148 RK 149
R+
Sbjct: 201 RR 202
>gi|15226794|ref|NP_181630.1| myb family transcription factor [Arabidopsis thaliana]
gi|2623311|gb|AAB86457.1| unknown protein [Arabidopsis thaliana]
gi|18252893|gb|AAL62373.1| unknown protein [Arabidopsis thaliana]
gi|20197124|gb|AAM14927.1| unknown protein [Arabidopsis thaliana]
gi|23197780|gb|AAN15417.1| unknown protein [Arabidopsis thaliana]
gi|330254814|gb|AEC09908.1| myb family transcription factor [Arabidopsis thaliana]
Length = 248
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 56/76 (73%), Gaps = 5/76 (6%)
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
G + + T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH
Sbjct: 93 GSIGGEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASH 152
Query: 265 LQEINLQKFRLYLKRL 280
LQK+RLYL+R+
Sbjct: 153 -----LQKYRLYLRRM 163
>gi|51571885|dbj|BAD38859.1| pseudo-response regulator 73 [Oryza sativa Indica Group]
Length = 767
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + D+PVI ++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 148 RK 149
R+
Sbjct: 201 RR 202
>gi|219887519|gb|ACL54134.1| unknown [Zea mays]
gi|413951205|gb|AFW83854.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 195
Score = 89.4 bits (220), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/70 (60%), Positives = 55/70 (78%), Gaps = 5/70 (7%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 272
++ ++PR+VW+ +LH++FV V LGI KAVPK I+ELMNV GLTRENVASH LQK
Sbjct: 88 NSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIMELMNVEGLTRENVASH-----LQK 142
Query: 273 FRLYLKRLNG 282
+RLY+KR+ G
Sbjct: 143 YRLYVKRMRG 152
>gi|158513189|sp|A2XFB7.2|PRR73_ORYSI RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
Length = 767
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + D+PVI ++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 148 RK 149
R+
Sbjct: 201 RR 202
>gi|222637749|gb|EEE67881.1| hypothetical protein OsJ_25707 [Oryza sativa Japonica Group]
Length = 661
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++VL+VD D + +++ +LR C+Y V A L + + D+VL++V MP +
Sbjct: 61 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 120
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + ++PVI ++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 121 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 180
Query: 148 RK 149
R+
Sbjct: 181 RR 182
>gi|307109409|gb|EFN57647.1| hypothetical protein CHLNCDRAFT_142770 [Chlorella variabilis]
Length = 524
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 54/69 (78%), Gaps = 5/69 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
+K R+VW+ ELH +F++A++ LG+ AVPK IL +MNV G+TRENVASH LQK+RL
Sbjct: 203 RKARLVWTQELHNRFINALSHLGLKNAVPKSILAMMNVDGMTRENVASH-----LQKYRL 257
Query: 276 YLKRLNGVS 284
YL+RL G+S
Sbjct: 258 YLRRLGGLS 266
>gi|255928914|gb|ACU42264.1| pseudo response regulator 37 [Pisum sativum]
Length = 780
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 92/174 (52%), Gaps = 21/174 (12%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++VL+VDDD + ++ +LR C Y VT S A L + D+VL++V MP +
Sbjct: 74 IKVLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKALEDPGNRIDLVLTEVAMPFVS 133
Query: 94 GF----KLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G K++ HI L+ ++PVI + + V + + GA D+L+KPIR ELKN+WQHV
Sbjct: 134 GIGLLCKIMSHIALK-NIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELKNLWQHV 192
Query: 147 VRK----------RWNENKEHENSGSLEETDHHKRGSDEIEYAS---SVNEGTE 187
R+ ++ S S+ D++ SDE +Y S SV +G++
Sbjct: 193 WRRCHSSSDSGSESGTNTRKFAKSRSICAYDNNSGSSDENDYGSRGLSVRDGSD 246
>gi|297796967|ref|XP_002866368.1| pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]
gi|297312203|gb|EFH42627.1| pseudo-response regulator 3 [Arabidopsis lyrata subsp. lyrata]
Length = 498
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + I+ +L+ C Y V S A IL + K C D+VL++V +P
Sbjct: 66 LKVLLVENDDSTRHIVTALLKNCSYEVNAVSDVLEAWRILEDEKSCIDLVLTEVVLPVHS 125
Query: 94 GF----KLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G K++ H L+ ++PVI + + V + + +GA D+L+KPIR+ ELKN+WQHV
Sbjct: 126 GTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHV 184
Query: 147 VRK 149
RK
Sbjct: 185 WRK 187
>gi|297827739|ref|XP_002881752.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
gi|297327591|gb|EFH58011.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
Length = 249
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 56/76 (73%), Gaps = 5/76 (6%)
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
G + + T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASH
Sbjct: 92 GSIGGEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASH 151
Query: 265 LQEINLQKFRLYLKRL 280
LQK+RLYL+R+
Sbjct: 152 -----LQKYRLYLRRM 162
>gi|355469068|gb|ACU42263.2| pseudo response regulator 37 [Pisum sativum]
Length = 792
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 92/174 (52%), Gaps = 21/174 (12%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++VL+VDDD + ++ +LR C Y VT S A L + D+VL++V MP +
Sbjct: 86 IKVLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKALEDPGNRIDLVLTEVAMPFVS 145
Query: 94 GF----KLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G K++ HI L+ ++PVI + + V + + GA D+L+KPIR ELKN+WQHV
Sbjct: 146 GIGLLCKIMSHIALK-NIPVIMMSSHDSMGIVFKCLSKGAADFLVKPIRRNELKNLWQHV 204
Query: 147 VRK----------RWNENKEHENSGSLEETDHHKRGSDEIEYAS---SVNEGTE 187
R+ ++ S S+ D++ SDE +Y S SV +G++
Sbjct: 205 WRRCHSSSDSGSESGTNTRKFAKSRSICAYDNNSGSSDENDYGSRGLSVRDGSD 258
>gi|145351734|ref|XP_001420222.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580455|gb|ABO98515.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 145
Score = 89.0 bits (219), Expect = 7e-15, Method: Composition-based stats.
Identities = 57/151 (37%), Positives = 84/151 (55%), Gaps = 19/151 (12%)
Query: 5 QRIVQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCS 64
+R +SGG G + +DV VLVVDD+ C + +LR+C Y VTT
Sbjct: 6 RRTSATSGGDG--PTATSDV----------HVLVVDDERICRTVTSSLLRKCGYRVTTAE 53
Query: 65 QAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLE---MDLPVI---TDGRVSAV 118
AL++LR R F ++L+DV MP +DG LL+ + + D+PVI + V
Sbjct: 54 SGEEALELLR-RGTEFHLLLTDVMMPGIDGPALLQIVRNDERLRDMPVIMMSANEHSDTV 112
Query: 119 MRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
R I++GA DYL+KP+ + +K++WQHV RK
Sbjct: 113 FRCIQYGAEDYLLKPVSRKAVKHMWQHVWRK 143
>gi|356504197|ref|XP_003520885.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 703
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 73/124 (58%), Gaps = 8/124 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +L +C Y V A + L+ + D++L++V +P +
Sbjct: 35 LRVLLVEADDSTRQIISALLHKCSYKVVAFCDGLKAWETLKNKPSDIDLILTEVDLPSIS 94
Query: 94 GFKLLEHIGLEMDL----PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
GF LL I +E D+ PVI + VS V++ + GA D+LIKP+R EL+N+WQHV
Sbjct: 95 GFSLLTLI-MEHDICKNIPVIMMSSHDSVSMVLKCMLKGAADFLIKPVRRNELRNLWQHV 153
Query: 147 VRKR 150
R+
Sbjct: 154 WRRH 157
>gi|71067060|dbj|BAE16282.1| StPCL1 [Solanum tuberosum]
Length = 314
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 67/105 (63%), Gaps = 12/105 (11%)
Query: 182 VNEGTEGTFKAQRKRISAKEEDDGEL----ESDDPS--TTKKPRVVWSVELHQQFVSAVN 235
+ EG++ K +R EE D L +DD S T K+PR+VW+ +LH++F+ V
Sbjct: 110 IREGSDPR-KLRRVESGGTEEADSSLCNENFADDSSAKTPKRPRLVWTPQLHKRFIEVVA 168
Query: 236 QLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRL 280
LGI AVPK I++LMNV GLTRENVASH LQK+RLY KR+
Sbjct: 169 HLGIKGAVPKTIMQLMNVEGLTRENVASH-----LQKYRLYTKRM 208
>gi|51571883|dbj|BAD38858.1| pseudo-response regulator 37 [Oryza sativa Indica Group]
Length = 704
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++VL+VD D + +++ +LR C+Y V A L + + D+VL++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + ++PVI ++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 148 RK 149
R+
Sbjct: 182 RR 183
>gi|302834688|ref|XP_002948906.1| Myb-related transcription factor [Volvox carteri f. nagariensis]
gi|300265651|gb|EFJ49841.1| Myb-related transcription factor [Volvox carteri f. nagariensis]
Length = 2120
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 54/69 (78%), Gaps = 5/69 (7%)
Query: 215 TKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFR 274
++PR++W+ ELH +F++ V QLG++ AVPK IL+LM V G+TRENVASH LQK+R
Sbjct: 1437 ARRPRMLWTHELHCRFMAVVAQLGVETAVPKNILQLMAVDGMTRENVASH-----LQKYR 1491
Query: 275 LYLKRLNGV 283
LYL+RL GV
Sbjct: 1492 LYLRRLAGV 1500
>gi|158513660|sp|A2YQ93.2|PRR37_ORYSI RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
Length = 742
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++VL+VD D + +++ +LR C+Y V A L + + D+VL++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + ++PVI ++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 148 RK 149
R+
Sbjct: 182 RR 183
>gi|115474289|ref|NP_001060743.1| Os07g0695100 [Oryza sativa Japonica Group]
gi|122166891|sp|Q0D3B6.1|PRR37_ORYSJ RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
gi|34394035|dbj|BAC84066.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
gi|113612279|dbj|BAF22657.1| Os07g0695100 [Oryza sativa Japonica Group]
Length = 742
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++VL+VD D + +++ +LR C+Y V A L + + D+VL++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + ++PVI ++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 148 RK 149
R+
Sbjct: 182 RR 183
>gi|51571877|dbj|BAD38855.1| pseudo-response regulator 37 [Oryza sativa Japonica Group]
Length = 742
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++VL+VD D + +++ +LR C+Y V A L + + D+VL++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + ++PVI ++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 148 RK 149
R+
Sbjct: 182 RR 183
>gi|325910796|dbj|BAJ83828.1| circadian response regulator 2a [Physcomitrella patens subsp.
patens]
Length = 915
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 72/117 (61%), Gaps = 9/117 (7%)
Query: 40 DDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLE 99
DDD T ++ +LR C Y VT+ + ++A +L E FD+VL+DV MP + G +L
Sbjct: 190 DDDAT-RHVVGALLRNCNYEVTSVANGSLAWGLLEEANSNFDLVLTDVVMPCLSGVGILS 248
Query: 100 HIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
+ L+ + +P++ + ++ V R + GACDYL+KP+R+ ELKN+WQHV RK
Sbjct: 249 KM-LKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVRKNELKNLWQHVWRK 304
>gi|308808948|ref|XP_003081784.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
gi|116060250|emb|CAL56309.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
Length = 878
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 71/122 (58%), Gaps = 7/122 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ VLVVDD+ C + +LRRC Y VT AL++LR R F ++L+DV MP +D
Sbjct: 30 VHVLVVDDERICRTVTSSLLRRCGYRVTMAESGEEALELLR-RGTEFHMLLTDVMMPGID 88
Query: 94 GFKLLEHIGLE---MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL+ + + D+PV+ + V R I+HGA DYL+KP+ +K++W HV
Sbjct: 89 GPALLQIVRNDERLRDMPVVMMSANEHSDTVFRCIQHGAEDYLLKPVSRRAVKHMWTHVW 148
Query: 148 RK 149
RK
Sbjct: 149 RK 150
>gi|357112782|ref|XP_003558186.1| PREDICTED: two-component response regulator-like PRR73-like
[Brachypodium distachyon]
Length = 766
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D +++ +LR+C Y V + A L + + D+VL++V MP +
Sbjct: 82 LRVLLVENDDCTRQVVGALLRKCGYEVISAENGLHAWQYLEDLQNRIDLVLTEVAMPCLS 141
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + D+PVI + + V + + GA D+L+KPIR+ ELKN+WQH+
Sbjct: 142 GISLLSKIMSHKICKDIPVIMMSKNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHIW 201
Query: 148 RK 149
R+
Sbjct: 202 RR 203
>gi|242087939|ref|XP_002439802.1| hypothetical protein SORBIDRAFT_09g020340 [Sorghum bicolor]
gi|241945087|gb|EES18232.1| hypothetical protein SORBIDRAFT_09g020340 [Sorghum bicolor]
Length = 332
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 56/72 (77%), Gaps = 6/72 (8%)
Query: 210 DDPSTT-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 268
D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVAS
Sbjct: 93 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVAS----- 147
Query: 269 NLQKFRLYLKRL 280
LQK+RLYLKR+
Sbjct: 148 QLQKYRLYLKRM 159
>gi|356539090|ref|XP_003538033.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR3-like [Glycine max]
Length = 792
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++VL+V+DD + ++ +LR C Y VT S A +L + + D+VL++V MP +
Sbjct: 90 IKVLLVEDDDSTRHVVRALLRNCSYEVTAVSNGLQAWKVLEDPENGIDLVLTEVAMPILS 149
Query: 94 GF----KLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G K++ H L+ ++PVI + + V + + GA D+L+KPIR ELKN+WQHV
Sbjct: 150 GIGLLCKIMSHKTLK-NIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKNLWQHV 208
Query: 147 VRK 149
R+
Sbjct: 209 WRR 211
>gi|334715189|gb|AEG90650.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ VL+V+ D R++ +LR C+Y V + A + L +++ D+VL +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 94 GFKLLEHI---GLEMDLPVI----TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + ++PVI D R + V + + GA D+L+ PIR+ ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDAR-NTVFKCLSKGAVDFLVNPIRKNELKNLWQHV 198
Query: 147 VRK 149
R+
Sbjct: 199 WRR 201
>gi|334715191|gb|AEG90651.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ VL+V+ D R++ +LR C+Y V + A + L +++ D+VL +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 94 GFKLLEHI---GLEMDLPVI----TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + ++PVI D R + V + + GA D+L+ PIR+ ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDAR-NTVFKCLSKGAVDFLVNPIRKNELKNLWQHV 198
Query: 147 VRK 149
R+
Sbjct: 199 WRR 201
>gi|334715193|gb|AEG90652.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ VL+V+ D R++ +LR C+Y V + A + L +++ D+VL +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 94 GFKLLEHI---GLEMDLPVI----TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + ++PVI D R + V + + GA D+L+ PIR+ ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDAR-NTVFKCLSKGAVDFLVNPIRKNELKNLWQHV 198
Query: 147 VRK 149
R+
Sbjct: 199 WRR 201
>gi|147776739|emb|CAN72415.1| hypothetical protein VITISV_027904 [Vitis vinifera]
Length = 991
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 74/124 (59%), Gaps = 8/124 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V S A + L+ D++L++V +P +
Sbjct: 51 LRVLLVEPDDSTRQIIAALLRKCSYKVAAVSDGLKAWEALKGEPQNVDLILTEVELPSIS 110
Query: 94 GFKLLEHIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
GF LL I +E D +PVI + +S V++ + GA D+L+KP+R+ EL N+WQHV
Sbjct: 111 GFALLSLI-MEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPVRKNELXNLWQHV 169
Query: 147 VRKR 150
R+
Sbjct: 170 WRRH 173
>gi|108707544|gb|ABF95339.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 533
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + D+PVI ++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 148 RK 149
R+
Sbjct: 201 RR 202
>gi|168027167|ref|XP_001766102.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
gi|162682745|gb|EDQ69161.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
Length = 1143
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 72/117 (61%), Gaps = 9/117 (7%)
Query: 40 DDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLE 99
DDD T ++ +LR C Y VT+ + ++A +L E FD+VL+DV MP + G +L
Sbjct: 190 DDDAT-RHVVGALLRNCNYEVTSVANGSLAWGLLEEANSNFDLVLTDVVMPCLSGVGILS 248
Query: 100 HIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
+ L+ + +P++ + ++ V R + GACDYL+KP+R+ ELKN+WQHV RK
Sbjct: 249 KM-LKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVRKNELKNLWQHVWRK 304
>gi|413934855|gb|AFW69406.1| putative two-component response regulator family protein [Zea mays]
Length = 790
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 133/286 (46%), Gaps = 34/286 (11%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILR---ERKGCFDVVLSDVHMP 90
L LV+D D L + + L + + V + A ALD ++ + D+VL +V++
Sbjct: 5 LSALVLDGDPASLSTISETLAKFNFRVVSFQTAEAALDFIKCGAAKAADLDLVLVEVNLN 64
Query: 91 DMD-----GFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNI 142
+M L HI E+ +P+ + A+ + + GAC +L+KP+ +
Sbjct: 65 NMAPGTSANPDLFHHILNELQVPLTAMCSRDDEEALSKCMNLGACFHLLKPLNRRSFSIL 124
Query: 143 WQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEE 202
W + + K SL ++ ++ S E V +R +S +
Sbjct: 125 WHQALEHK--SKKAAPQRPSLNDSTKNRMVSPSTEKPKEV-------LILERNNLSVPQS 175
Query: 203 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDK-AVPKRILELMNVPGLTRENV 261
+ E K+ RV W++ELH++F+ AV LG +K A P++IL LMNV GLT +++
Sbjct: 176 NGYE------EPKKQNRVTWTIELHEKFLEAVEALGGNKSARPEKILHLMNVKGLTVKHI 229
Query: 262 ASHLQEINL--QKFRLYLKRLNG----VSQQGGITNSFCAP-IETN 300
SHLQ+ L Q + ++ N +S+QG T+ P +ET+
Sbjct: 230 GSHLQKHRLRNQNTKQGQRQENASRKPISRQGEATSESITPRVETD 275
>gi|316930963|gb|ADU60098.1| pseudo response regulator 1 [Zea mays]
Length = 515
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 35/182 (19%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D D T R + ++L C Y+VT ++IL G D++L++V +P
Sbjct: 24 VRILLCDGDATSPREVLRLLCNCAYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPVSK 83
Query: 94 GFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
FK+L++I DL P+I VS V++ +R GA +YL+KP+R EL N+W HV
Sbjct: 84 CFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVW 143
Query: 148 RKR----------WNENKE---------HENSGSL--EETDHHKRG--------SDEIEY 178
R+R +N+N E + NS +L +ETD +G S ++EY
Sbjct: 144 RRRRMLGLPEKNFFNDNFELVLSEPSDANTNSTTLLSDETDDRPKGNTNQETGTSKQLEY 203
Query: 179 AS 180
S
Sbjct: 204 ES 205
>gi|195604808|gb|ACG24234.1| two-component response regulator-like PRR73 [Zea mays]
Length = 765
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V M +
Sbjct: 82 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYLEDLQNNIDLVLTEVFMTCLS 141
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + D+PVI T+ +S V + + GA D+L+KP+R+ ELKN+WQHV
Sbjct: 142 GIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 201
Query: 148 RK 149
R+
Sbjct: 202 RR 203
>gi|28948379|pdb|1IRZ|A Chain A, Solution Structure Of Arr10-B Belonging To The Garp Family
Of Plant Myb-Related Dna Binding Motifs Of The
Arabidopsis Response Regulators
Length = 64
Score = 87.8 bits (216), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/69 (57%), Positives = 56/69 (81%), Gaps = 5/69 (7%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 272
+ KKPRV+W+ ELH +F++AV+ LG+++AVPK+IL+LMNV LTRENVASH LQK
Sbjct: 1 TAQKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASH-----LQK 55
Query: 273 FRLYLKRLN 281
FR+ LK+++
Sbjct: 56 FRVALKKVS 64
>gi|170172424|dbj|BAG12980.1| RHYTHM OF CHLOROPLAST 75 [Chlamydomonas reinhardtii]
gi|170172426|dbj|BAG12981.1| RHYTHM OF CHLOROPLAST 75 [Chlamydomonas reinhardtii]
Length = 1705
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 50/64 (78%), Gaps = 5/64 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KKPR+ WS ELH +F++A+ QLGI AVPK IL+LMNV GLTRENVASH LQK+R+
Sbjct: 1271 KKPRINWSQELHARFLNAMFQLGIKNAVPKTILQLMNVEGLTRENVASH-----LQKYRI 1325
Query: 276 YLKR 279
LKR
Sbjct: 1326 LLKR 1329
>gi|84570625|dbj|BAE72697.1| pseudo-response regulator 37 homologue [Lemna paucicostata]
Length = 617
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +LR C Y VT + A +L D+VL++V MP +
Sbjct: 77 LKVLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKVLENLSNNVDIVLTEVVMPSLS 136
Query: 94 GF----KLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G K++ HI L+ +PVI + + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 137 GIGLLDKIMSHITLKT-IPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHV 195
Query: 147 VRK 149
R+
Sbjct: 196 WRR 198
>gi|302844239|ref|XP_002953660.1| myb-related transcription factor [Volvox carteri f. nagariensis]
gi|300261069|gb|EFJ45284.1| myb-related transcription factor [Volvox carteri f. nagariensis]
Length = 1004
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 50/64 (78%), Gaps = 5/64 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KKPR+ WS ELH +F++A+ QLGI AVPK IL+LMNV GLTRENVASH LQK+R+
Sbjct: 855 KKPRINWSQELHARFLNAMFQLGIKNAVPKTILQLMNVEGLTRENVASH-----LQKYRI 909
Query: 276 YLKR 279
LKR
Sbjct: 910 LLKR 913
>gi|84570635|dbj|BAE72702.1| pseudo-response regulator 95 homologue [Lemna gibba]
Length = 460
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 76/123 (61%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V++ S A L+E+ D+VL++V +P++
Sbjct: 31 LRVLLVEADDSTRKIVAALLRKCGYKVSSASDGLEAWKTLKEKPNDTDLVLTEVELPNVS 90
Query: 94 GFKLL----EHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G+ LL EH + +PVI ++ + V + GA D+L+KPIR+ EL+N+WQHV
Sbjct: 91 GYALLSMMMEHETCK-SIPVIMMSSNDSMKMVFECMLKGAADFLVKPIRKNELRNLWQHV 149
Query: 147 VRK 149
R+
Sbjct: 150 WRR 152
>gi|281308394|gb|ADA58345.1| pseudo-response regulator 5b [Brassica rapa]
Length = 628
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 79/131 (60%), Gaps = 15/131 (11%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTC--SQAAV-----ALDILRERKGCFDVVLSD 86
LRVL+V+ D + +I+ +LR+C Y V S AAV A ++LR + D++L++
Sbjct: 112 LRVLLVEADDSTRQIISALLRKCSYRVFPFHFSVAAVPDGLKAWEMLRGKPESVDLILTE 171
Query: 87 VHMPDMDGFKLLEHIGLEMDL----PVI---TDGRVSAVMRGIRHGACDYLIKPIREEEL 139
V +P + G+ LL I +E DL PVI T V+ V + + GA DYL+KP+R EL
Sbjct: 172 VDLPSISGYALLTLI-MEHDLCKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNEL 230
Query: 140 KNIWQHVVRKR 150
+N+WQHV R++
Sbjct: 231 RNLWQHVWRRQ 241
>gi|226532758|ref|NP_001147823.1| LOC100281433 [Zea mays]
gi|195613968|gb|ACG28814.1| two-component response regulator-like PRR1 [Zea mays]
Length = 515
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 35/182 (19%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D D T R + ++L C Y+VT ++IL G D++L++V +P
Sbjct: 24 VRILLCDGDATSSREVLRLLCNCAYHVTCAKSPRQVVNILNYEGGEIDIILAEVDLPVSK 83
Query: 94 GFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
FK+L++I DL P+I VS V++ +R GA +YL+KP+R EL N+W HV
Sbjct: 84 CFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVW 143
Query: 148 RKR----------WNENKE---------HENSGSL--EETDHHKRG--------SDEIEY 178
R+R +N+N E + NS +L +ETD +G S ++EY
Sbjct: 144 RRRRMLGLPEKNFFNDNFELVLSEPSDANTNSTTLLSDETDDRPKGNTNQETGTSKQLEY 203
Query: 179 AS 180
S
Sbjct: 204 ES 205
>gi|302782157|ref|XP_002972852.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
gi|300159453|gb|EFJ26073.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
Length = 639
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V+DD + ++ +LR C Y V + A +L +R D+VL+DV MP +
Sbjct: 42 LKVLLVEDDDSTRHVVAALLRNCGYQVVPAANGLQAWSLLDDRNREIDLVLTDVVMPGLS 101
Query: 94 GFKLLE---HIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL H +PV+ + + V + + GA D+L+KP+R+ ELKN+WQH
Sbjct: 102 GLGLLSKIMHHKNHQKVPVVMMSSHDSTNVVFKCLTKGAADFLVKPVRKNELKNLWQHAW 161
Query: 148 RK 149
RK
Sbjct: 162 RK 163
>gi|323388709|gb|ADX60159.1| pseudoARR-B transcription factor [Zea mays]
gi|413923083|gb|AFW63015.1| two-component response regulator-like PRR1 [Zea mays]
Length = 515
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 35/182 (19%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D D T R + ++L C Y+VT ++IL G D++L++V +P
Sbjct: 24 VRILLCDGDATSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPVSK 83
Query: 94 GFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
FK+L++I DL P+I VS V++ +R GA +YL+KP+R EL N+W HV
Sbjct: 84 CFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTHVW 143
Query: 148 RKR----------WNENKE---------HENSGSL--EETDHHKRG--------SDEIEY 178
R+R +N+N E + NS +L +ETD +G S ++EY
Sbjct: 144 RRRRMLGLPEKNFFNDNFELVLSEPSDANTNSTTLLSDETDDRPKGNTNQETGTSKQLEY 203
Query: 179 AS 180
S
Sbjct: 204 ES 205
>gi|330794882|ref|XP_003285505.1| hypothetical protein DICPUDRAFT_97064 [Dictyostelium purpureum]
gi|325084508|gb|EGC37934.1| hypothetical protein DICPUDRAFT_97064 [Dictyostelium purpureum]
Length = 729
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P+ +R+LVVDDD ++LE +L++ YNVT S +A D + + +D+VL+DV MP
Sbjct: 106 PSKVRILVVDDDDVQRKVLENLLKKFHYNVTLVSNGEIAWDNISSGQQKYDLVLTDVMMP 165
Query: 91 DMDGFKLLEHIG---LEMDLPVITDGRVSAVMR----GIRHGACDYLIKPIREEELKNIW 143
+ GF LL+ I + ++PVI + + I+ G D+L KPI +E LK
Sbjct: 166 HITGFDLLQRINDHPIYKNIPVILMSGTAVDYKYANDTIKIGGQDFLTKPIAKELLKKKI 225
Query: 144 QHVVRKRWNENKEHENSGSL-EETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKE 201
V++ W KE E SL +E + R + E+E +E E T K + +KE
Sbjct: 226 DTVLQSIWQRKKEEEYKASLAQEREKGTRLAKEMELKE--HEIEELTKKVSKMSTISKE 282
>gi|108707545|gb|ABF95340.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 473
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + D+PVI ++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 148 RK 149
R+
Sbjct: 201 RR 202
>gi|170172416|dbj|BAG12976.1| RHYTHM OF CHLOROPLAST 15 [Chlamydomonas reinhardtii]
Length = 631
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 59/87 (67%), Gaps = 11/87 (12%)
Query: 203 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 262
DDG + K+PR+VW+ +LH++F SAV +LG DKAVPK I++ MN+ GLTRENVA
Sbjct: 383 DDGTTRA-----VKRPRLVWTPQLHRKFESAVIKLGEDKAVPKTIMQEMNIDGLTRENVA 437
Query: 263 SHLQEINLQKFRLYLKR-LNGVSQQGG 288
SH LQK+R+ +R + G S GG
Sbjct: 438 SH-----LQKYRMIKRRDVTGTSSDGG 459
>gi|218200317|gb|EEC82744.1| hypothetical protein OsI_27455 [Oryza sativa Indica Group]
Length = 507
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++VL+V+ D + +++ +LR C+Y V A L + + D+VL++V MP +
Sbjct: 61 IKVLLVESDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 120
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + ++PVI ++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 121 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 180
Query: 148 RK 149
R+
Sbjct: 181 RR 182
>gi|356542579|ref|XP_003539744.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like PRR37-like [Glycine max]
Length = 777
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 73/123 (59%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++VL+V+DD + ++ +L+ C Y VT S A +L + + D+VL++V MP +
Sbjct: 73 IKVLLVEDDDSTRHVVRALLQNCSYKVTAVSNGLQAWKVLEDPENGIDLVLTEVAMPILS 132
Query: 94 GF----KLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G K++ H L+ ++PVI + + V + + GA D+L+KPIR ELKN+WQHV
Sbjct: 133 GIGLLCKIMSHKTLK-NIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKNLWQHV 191
Query: 147 VRK 149
R+
Sbjct: 192 WRR 194
>gi|225435163|ref|XP_002281776.1| PREDICTED: two-component response regulator-like PRR73-like [Vitis
vinifera]
Length = 785
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 99/186 (53%), Gaps = 24/186 (12%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +LR C Y VT + A IL + D+VL++V MP +
Sbjct: 95 LKVLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKILEDLTNHIDIVLTEVVMPFIS 154
Query: 94 GF----KLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G K++ H + ++PVI + + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 155 GIGLLCKIMSHKTFK-NIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHV 213
Query: 147 VRK----------RWNENKEHENSGSLEETDHHKRGSDEIEYAS---SVNEGTE---GTF 190
R+ + K+ S S +E++++ SDE + S S+ +G++ GT
Sbjct: 214 WRRCHSSSGSGSESGTQTKKSVKSKSNDESENNTGSSDERDNGSTGPSIRDGSDNGSGTQ 273
Query: 191 KAQRKR 196
+ KR
Sbjct: 274 SSWTKR 279
>gi|242062346|ref|XP_002452462.1| hypothetical protein SORBIDRAFT_04g026190 [Sorghum bicolor]
gi|241932293|gb|EES05438.1| hypothetical protein SORBIDRAFT_04g026190 [Sorghum bicolor]
Length = 524
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 72/125 (57%), Gaps = 6/125 (4%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D D T R + ++L C Y+VT ++IL G D++L++V +P
Sbjct: 32 SKVRILLCDGDATSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPV 91
Query: 92 MDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
FK+L++I DL P+I VS V++ +R GA +YL+KP+R EL N+W H
Sbjct: 92 SKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTH 151
Query: 146 VVRKR 150
V R+R
Sbjct: 152 VWRRR 156
>gi|410716788|gb|AFV78770.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716832|gb|AFV78792.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQKLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGA 126
L D++L++V +P GFK+L++I L P++ V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 127 CDYLIKPIREEELKNIWQHVVRKR 150
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|410718344|gb|AFV79548.1| pseudo response regulator 1 [Pinus pinaster]
Length = 565
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGA 126
L D++L++V +P GFK+L++I L P++ V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 127 CDYLIKPIREEELKNIWQHVVRKR 150
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|410716908|gb|AFV78830.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 79/142 (55%), Gaps = 6/142 (4%)
Query: 15 GYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILR 74
G GS +D A + +R+L+ D D T + L ++LR+C Y VT S A + +L
Sbjct: 2 GKGSISNSDAASSVLDRSFVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSVLN 61
Query: 75 ERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACD 128
D++L++V +P GFK+L++I L P++ V+ VM+ ++ GA D
Sbjct: 62 TEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGAAD 121
Query: 129 YLIKPIREEELKNIWQHVVRKR 150
YL+KP+R EL N+W H+ R+R
Sbjct: 122 YLVKPLRINELLNLWMHMWRRR 143
>gi|297736458|emb|CBI25329.3| unnamed protein product [Vitis vinifera]
Length = 769
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + +++ +LR C Y VT + A IL + D+VL++V +P +
Sbjct: 94 LKVLLVENDNSTRQVVSALLRNCSYEVTAVANGVQAWSILDDLTNHVDLVLAEVALPSLS 153
Query: 94 GF----KLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G K++ H + ++PVI + V V + + GA D+ +KPIR+ ELKN+WQHV
Sbjct: 154 GIGLLCKIMNHKACK-NIPVIMMSSHDSVGIVFKCLSKGAVDFFVKPIRKNELKNLWQHV 212
Query: 147 VRK 149
RK
Sbjct: 213 WRK 215
>gi|15241429|ref|NP_199232.1| protein GOLDEN2-like 2 [Arabidopsis thaliana]
gi|75333752|sp|Q9FFH0.1|GLK2_ARATH RecName: Full=Transcription activator GLK2; AltName: Full=GBF'S
PRO-RICH REGION-INTERACTING factor 2; AltName:
Full=Golden2-like protein 2; Short=AtGLK2
gi|9759520|dbj|BAB10986.1| unnamed protein product [Arabidopsis thaliana]
gi|13311005|gb|AAK16744.1| golden2-like transcription factor [Arabidopsis thaliana]
gi|13432090|gb|AAK20121.1| golden2-like protein 2 [Arabidopsis thaliana]
gi|17221601|dbj|BAB78467.1| GPRI2 [Arabidopsis thaliana]
gi|332007689|gb|AED95072.1| protein GOLDEN2-like 2 [Arabidopsis thaliana]
Length = 386
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 52/72 (72%), Gaps = 5/72 (6%)
Query: 209 SDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 268
SD+ KKP+V W+ ELH++FV AV QLG+DKAVP RILE+MNV LTR NVASH
Sbjct: 139 SDENDIKKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASH---- 194
Query: 269 NLQKFRLYLKRL 280
LQK+R + K L
Sbjct: 195 -LQKYRSHRKHL 205
>gi|15215715|gb|AAK91403.1| AT5g44190/MLN1_11 [Arabidopsis thaliana]
gi|21700809|gb|AAM70528.1| AT5g44190/MLN1_11 [Arabidopsis thaliana]
Length = 314
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 52/72 (72%), Gaps = 5/72 (6%)
Query: 209 SDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 268
SD+ KKP+V W+ ELH++FV AV QLG+DKAVP RILE+MNV LTR NVASH
Sbjct: 139 SDENDIKKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASH---- 194
Query: 269 NLQKFRLYLKRL 280
LQK+R + K L
Sbjct: 195 -LQKYRSHRKHL 205
>gi|84570631|dbj|BAE72700.1| pseudo-response regulator 37 homologue [Lemna gibba]
Length = 623
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +LR C Y VT + A L D+VL++V MP +
Sbjct: 77 LKVLLVENDDSTRHVVNALLRNCSYEVTAVANGLEAWKFLENLSNNVDIVLTEVVMPSLT 136
Query: 94 GFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL+ I M L PVI + + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 137 GIGLLDKIMSHMTLKTIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 196
Query: 148 RK 149
R+
Sbjct: 197 RR 198
>gi|410716910|gb|AFV78831.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGA 126
L D++L++V +P GFK+L++I L P++ V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 127 CDYLIKPIREEELKNIWQHVVRKR 150
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|410716730|gb|AFV78741.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGA 126
L D++L++V +P GFK+L++I L P++ V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 127 CDYLIKPIREEELKNIWQHVVRKR 150
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|410716738|gb|AFV78745.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716742|gb|AFV78747.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716744|gb|AFV78748.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716752|gb|AFV78752.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716756|gb|AFV78754.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716768|gb|AFV78760.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716772|gb|AFV78762.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716776|gb|AFV78764.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716784|gb|AFV78768.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716808|gb|AFV78780.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716810|gb|AFV78781.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716828|gb|AFV78790.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGA 126
L D++L++V +P GFK+L++I L P++ V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 127 CDYLIKPIREEELKNIWQHVVRKR 150
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|410716834|gb|AFV78793.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716890|gb|AFV78821.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGA 126
L D++L++V +P GFK+L++I L P++ V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 127 CDYLIKPIREEELKNIWQHVVRKR 150
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|410716774|gb|AFV78763.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716780|gb|AFV78766.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716802|gb|AFV78777.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716814|gb|AFV78783.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716864|gb|AFV78808.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716874|gb|AFV78813.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716918|gb|AFV78835.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGA 126
L D++L++V +P GFK+L++I L P++ V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 127 CDYLIKPIREEELKNIWQHVVRKR 150
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|410716750|gb|AFV78751.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716798|gb|AFV78775.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716942|gb|AFV78847.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716946|gb|AFV78849.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716952|gb|AFV78852.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716956|gb|AFV78854.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716958|gb|AFV78855.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGA 126
L D++L++V +P GFK+L++I L P++ V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 127 CDYLIKPIREEELKNIWQHVVRKR 150
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|410716904|gb|AFV78828.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGA 126
L D++L++V +P GFK+L++I L P++ V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 127 CDYLIKPIREEELKNIWQHVVRKR 150
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|410716876|gb|AFV78814.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716898|gb|AFV78825.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGA 126
L D++L++V +P GFK+L++I L P++ V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 127 CDYLIKPIREEELKNIWQHVVRKR 150
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|410716824|gb|AFV78788.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGA 126
L D++L++V +P GFK+L++I L P++ V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 127 CDYLIKPIREEELKNIWQHVVRKR 150
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|410716778|gb|AFV78765.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716862|gb|AFV78807.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGA 126
L D++L++V +P GFK+L++I L P++ V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 127 CDYLIKPIREEELKNIWQHVVRKR 150
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|410716728|gb|AFV78740.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716732|gb|AFV78742.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716734|gb|AFV78743.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716736|gb|AFV78744.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716740|gb|AFV78746.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716746|gb|AFV78749.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716748|gb|AFV78750.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716754|gb|AFV78753.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716758|gb|AFV78755.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716760|gb|AFV78756.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716762|gb|AFV78757.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716764|gb|AFV78758.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716766|gb|AFV78759.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716770|gb|AFV78761.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716782|gb|AFV78767.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716786|gb|AFV78769.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716790|gb|AFV78771.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716792|gb|AFV78772.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716794|gb|AFV78773.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716796|gb|AFV78774.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716800|gb|AFV78776.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716804|gb|AFV78778.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716806|gb|AFV78779.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716812|gb|AFV78782.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716816|gb|AFV78784.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716818|gb|AFV78785.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716820|gb|AFV78786.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716822|gb|AFV78787.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716826|gb|AFV78789.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716830|gb|AFV78791.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716836|gb|AFV78794.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716838|gb|AFV78795.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716840|gb|AFV78796.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716842|gb|AFV78797.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716844|gb|AFV78798.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716846|gb|AFV78799.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716848|gb|AFV78800.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716850|gb|AFV78801.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716852|gb|AFV78802.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716854|gb|AFV78803.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716856|gb|AFV78804.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716858|gb|AFV78805.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716860|gb|AFV78806.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716866|gb|AFV78809.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716868|gb|AFV78810.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716870|gb|AFV78811.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716872|gb|AFV78812.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716878|gb|AFV78815.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716880|gb|AFV78816.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716882|gb|AFV78817.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716884|gb|AFV78818.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716886|gb|AFV78819.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716888|gb|AFV78820.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716892|gb|AFV78822.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716894|gb|AFV78823.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716896|gb|AFV78824.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716900|gb|AFV78826.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716902|gb|AFV78827.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716906|gb|AFV78829.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716912|gb|AFV78832.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716914|gb|AFV78833.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716916|gb|AFV78834.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716920|gb|AFV78836.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716922|gb|AFV78837.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716924|gb|AFV78838.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716926|gb|AFV78839.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716928|gb|AFV78840.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716930|gb|AFV78841.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716932|gb|AFV78842.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716934|gb|AFV78843.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716936|gb|AFV78844.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716938|gb|AFV78845.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716940|gb|AFV78846.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716944|gb|AFV78848.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716948|gb|AFV78850.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716950|gb|AFV78851.1| pseudo response regulator 1 [Pinus sylvestris]
gi|410716954|gb|AFV78853.1| pseudo response regulator 1 [Pinus sylvestris]
Length = 565
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Query: 13 GSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
G G S+ A +V D+ + +R+L+ D D T + L ++LR+C Y VT S A + +
Sbjct: 2 GKGSISNSDAGSSVLDR--SCVRILLCDKDPTNSQQLLELLRKCSYQVTAVSTAREVVSV 59
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGA 126
L D++L++V +P GFK+L++I L P++ V+ VM+ ++ GA
Sbjct: 60 LNTEGREIDLILAEVDLPKSKGFKMLKYITRSTCLQRIPIVMMSAQDEVAVVMKCLKLGA 119
Query: 127 CDYLIKPIREEELKNIWQHVVRKR 150
DYL+KP+R EL N+W H+ R+R
Sbjct: 120 ADYLVKPLRINELLNLWMHMWRRR 143
>gi|297794987|ref|XP_002865378.1| hypothetical protein ARALYDRAFT_494575 [Arabidopsis lyrata subsp.
lyrata]
gi|297311213|gb|EFH41637.1| hypothetical protein ARALYDRAFT_494575 [Arabidopsis lyrata subsp.
lyrata]
Length = 368
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 52/72 (72%), Gaps = 5/72 (6%)
Query: 209 SDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 268
S+D KKP+V W+ ELH++FV AV QLG+DKAVP RILE+MNV LTR NVASH
Sbjct: 121 SNDNDIKKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASH---- 176
Query: 269 NLQKFRLYLKRL 280
LQK+R + K L
Sbjct: 177 -LQKYRSHRKHL 187
>gi|359486449|ref|XP_002275645.2| PREDICTED: two-component response regulator-like PRR73 [Vitis
vinifera]
Length = 747
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + +++ +LR C Y VT + A IL + D+VL++V +P +
Sbjct: 72 LKVLLVENDNSTRQVVSALLRNCSYEVTAVANGVQAWSILDDLTNHVDLVLAEVALPSLS 131
Query: 94 GF----KLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G K++ H + ++PVI + V V + + GA D+ +KPIR+ ELKN+WQHV
Sbjct: 132 GIGLLCKIMNHKACK-NIPVIMMSSHDSVGIVFKCLSKGAVDFFVKPIRKNELKNLWQHV 190
Query: 147 VRK 149
RK
Sbjct: 191 WRK 193
>gi|242036083|ref|XP_002465436.1| hypothetical protein SORBIDRAFT_01g038820 [Sorghum bicolor]
gi|241919290|gb|EER92434.1| hypothetical protein SORBIDRAFT_01g038820 [Sorghum bicolor]
Length = 765
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRV++V++D + +++ +LR+C Y V + A L + + D+VL++V MP +
Sbjct: 80 LRVMLVENDDSTRQVVSALLRKCCYEVIPAENGSHAWRYLEDLQNNIDLVLTEVFMPCLS 139
Query: 94 GFKLLEHI---GLEMDLPVITDGRVSA---VMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + D+PVI + V + + GA D+L+KP+R+ ELKN+WQHV
Sbjct: 140 GIGLLSKITSHKICKDIPVIMMSSNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVW 199
Query: 148 RK 149
R+
Sbjct: 200 RR 201
>gi|281308384|gb|ADA58340.1| pseudo-response regulator 3 [Brassica rapa]
Length = 492
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + I+ +L+ C Y VT A +L + C D+VL++V MP
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWKVLEDENSCIDLVLTEVVMPVNS 123
Query: 94 GF----KLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G K++ H L+ ++PVI + + V + + +GA D+L+KPIR+ ELKN+WQHV
Sbjct: 124 GTGLLSKIMSHQTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHV 182
Query: 147 VRK 149
R+
Sbjct: 183 WRR 185
>gi|422898326|dbj|BAM67029.1| timing of cab expression 1-like [Chrysanthemum seticuspe f.
boreale]
Length = 562
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 6/125 (4%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D+D+ + +L +C Y VT +D L D++LS+V +P
Sbjct: 18 SKVRILLCDNDMKSSVEVYDLLSKCSYQVTPVRSPRQVIDALNVEGPDIDIILSEVDLPM 77
Query: 92 MDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
GFK+L++I + DL PVI V+ V++ +R GA DYL+KP+R EL N+W H
Sbjct: 78 AKGFKMLKYIMRDKDLRRIPVIMMSAQDEVAVVVKCLRLGAADYLVKPLRTNELLNLWTH 137
Query: 146 VVRKR 150
+ R+R
Sbjct: 138 MWRRR 142
>gi|357482309|ref|XP_003611440.1| Two-component response regulator-like protein [Medicago truncatula]
gi|355512775|gb|AES94398.1| Two-component response regulator-like protein [Medicago truncatula]
Length = 548
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK +V W+ ELH++FV AV QLGID+A+P RILELM V GLTR NVASHLQ QK+R+
Sbjct: 310 KKMKVDWTAELHKKFVKAVEQLGIDQAIPSRILELMKVDGLTRHNVASHLQIFVEQKYRM 369
Query: 276 YLKRL 280
+ +++
Sbjct: 370 HKRQI 374
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVL+++ D + L YNV+T AL + CF V + +V +
Sbjct: 14 FPKGLRVLLLEGDNNSASEIRTKLESMDYNVSTFYNENEALSAISSSPKCFHVAIVEVSI 73
Query: 90 --PDMDGFKLLEHIGLEMDLPVITDGR---VSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
PD GFK LE+ DLP I ++ +M+ I GA ++L KP+ E++LKNIWQ
Sbjct: 74 SCPD-GGFKFLENAK---DLPTIMTSNSQCINTMMKCIALGAVEFLTKPLSEDKLKNIWQ 129
Query: 145 HVVRKRWN 152
HVV K +N
Sbjct: 130 HVVHKAFN 137
>gi|224128053|ref|XP_002320232.1| pseudo response regulator [Populus trichocarpa]
gi|222861005|gb|EEE98547.1| pseudo response regulator [Populus trichocarpa]
Length = 717
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 95/176 (53%), Gaps = 17/176 (9%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L VL+V+ D + +I+ +LR+C Y V +A + L+ D++L++V +P +
Sbjct: 44 LSVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLMAWETLKGGPHNIDLILTEVELPLIS 103
Query: 94 GFKLL----EHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G+ LL EH + ++PVI + +S V++ + GA D+LIKP+R+ EL+N+WQHV
Sbjct: 104 GYALLTLVTEH-AVCKNIPVIMMSSQDSISMVLKCMLKGAADFLIKPVRKNELRNLWQHV 162
Query: 147 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEE 202
R ++ ++G + + H S EI AS+ G+ + + RK E+
Sbjct: 163 WR------RQTLSAGQIPQNLHKVEASSEINAASN---GSSDSVMSSRKNKDCSEK 209
>gi|145352641|ref|XP_001420647.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580882|gb|ABO98940.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 255
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 59/90 (65%), Gaps = 5/90 (5%)
Query: 215 TKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFR 274
+K+ R+VW+ +LH QF++AV +LG+ AVPK I+++MNV GLTRENVASH LQK+R
Sbjct: 107 SKRQRLVWTPQLHAQFIAAVQKLGVKTAVPKAIMKIMNVKGLTRENVASH-----LQKYR 161
Query: 275 LYLKRLNGVSQQGGITNSFCAPIETNVKLG 304
L LKR S+ + ++V+ G
Sbjct: 162 LTLKRAQDSSESTRASGDATDAKRSDVRAG 191
>gi|240254335|ref|NP_176988.4| pseudo-response regulator 6 [Arabidopsis thaliana]
gi|363548390|sp|Q9C9F6.2|APRR6_ARATH RecName: Full=Putative two-component response regulator-like APRR6;
AltName: Full=Pseudo-response regulator 6
gi|332196644|gb|AEE34765.1| pseudo-response regulator 6 [Arabidopsis thaliana]
Length = 755
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 28/265 (10%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ +L++D D + L ML++ V + A+ AL ++ ++K ++++++ MP +D
Sbjct: 13 ISILLIDHDTASIASLTSMLQQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHID 72
Query: 94 GFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 150
L + L+ D+P+I + + + AC L KPI +++KN+WQHV K+
Sbjct: 73 SHSFLNALLLK-DIPLILINPEIKTKEPSDLLTKRACFSLDKPISNDDIKNMWQHVFSKK 131
Query: 151 WNENKE---HENSGSLEETDHHKRGS-------DEIEYASSVNE----GTEGTFKAQRKR 196
E K+ E+ ++ + D ++ + I AS + T T++ +KR
Sbjct: 132 SQELKKINITEDQENVMDKDTYQIEAFRANLKRQRISQASLLGRRPFIDTFSTYETFQKR 191
Query: 197 -----ISAKEEDDGELESDDPSTTKKPRV-----VWSVELHQQFVSAVNQLGIDKAVPKR 246
+ K +E ++ K V +W+ E H +F++A++ LG + PK
Sbjct: 192 KSIANVEWKTTPSYAIEIENKRKEWKKSVGRRKSLWNSERHMKFIAAISILGEEDFRPKS 251
Query: 247 ILELMNVPGLTRENVASHLQEINLQ 271
ILE+MN P LT V SHLQ+ Q
Sbjct: 252 ILEIMNDPNLTHRQVGSHLQKYKAQ 276
>gi|414888254|tpg|DAA64268.1| TPA: hypothetical protein ZEAMMB73_417596 [Zea mays]
Length = 177
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 6/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L VL+V+ D + +++ +LR C+Y V + A L +++ D+VL++V MP +
Sbjct: 51 LNVLLVESDDSTRQVVSALLRCCMYQVISAENGQQAWAYLEDKRNNIDLVLTEVFMPGVS 110
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + ++PVI + +S V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 111 GISLLSRIMSHNICKNIPVIMMSSSDAMSTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 170
Query: 148 RKR 150
R+R
Sbjct: 171 RQR 173
>gi|334715197|gb|AEG90654.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 291
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ VL+V+ D R++ +LR C+Y V + A + L +++ D+VL +V MP +
Sbjct: 80 INVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYLEDKQNNIDIVLIEVFMPGVS 139
Query: 94 GFKLLEHI---GLEMDLPVI----TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + ++PVI D R + V + + GA D+L+ PIR+ ELKN+WQHV
Sbjct: 140 GISLLSRIMSHNICKNIPVIMMSSNDAR-NTVFKCLSKGAVDFLVNPIRKNELKNLWQHV 198
Query: 147 VRK 149
R+
Sbjct: 199 WRR 201
>gi|297746178|emb|CBI16234.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 99/186 (53%), Gaps = 24/186 (12%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +LR C Y VT + A IL + D+VL++V MP +
Sbjct: 95 LKVLLVENDDSTRHVVTALLRNCSYEVTAVANGLQAWKILEDLTNHIDIVLTEVVMPFIS 154
Query: 94 GF----KLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G K++ H + ++PVI + + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 155 GIGLLCKIMSHKTFK-NIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHV 213
Query: 147 VRK----------RWNENKEHENSGSLEETDHHKRGSDEIEYAS---SVNEGTE---GTF 190
R+ + K+ S S +E++++ SDE + S S+ +G++ GT
Sbjct: 214 WRRCHSSSGSGSESGTQTKKSVKSKSNDESENNTGSSDERDNGSTGPSIRDGSDNGSGTQ 273
Query: 191 KAQRKR 196
+ KR
Sbjct: 274 SSWTKR 279
>gi|308913672|gb|ADO51646.1| TOC1b [Zea mays]
Length = 488
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 72/125 (57%), Gaps = 6/125 (4%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D D + R + ++L C Y+VT ++IL G D++L++V +P
Sbjct: 26 SKVRILLCDGDASSSREVLRLLCNCSYHVTCAKSPRQVINILNYEGGEIDIILAEVDLPV 85
Query: 92 MDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
FK+L++I DL P+I VS V++ +R GA +YL+KP+R EL N+W H
Sbjct: 86 SKCFKMLKYIARNKDLRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRTNELLNLWTH 145
Query: 146 VVRKR 150
V R+R
Sbjct: 146 VWRRR 150
>gi|15240235|ref|NP_200946.1| two-component response regulator-like APRR1 [Arabidopsis thaliana]
gi|52783243|sp|Q9LKL2.1|APRR1_ARATH RecName: Full=Two-component response regulator-like APRR1; AltName:
Full=ABI3-interacting protein 1; AltName:
Full=Pseudo-response regulator 1; AltName: Full=Timing
of CAB expression 1
gi|9247020|gb|AAF86252.1|AF272039_1 timing of CAB expression 1 protein [Arabidopsis thaliana]
gi|7576354|dbj|BAA94547.1| pseudo-response regulator 1 [Arabidopsis thaliana]
gi|9757859|dbj|BAB08493.1| pseudo-response regulator 1 [Arabidopsis thaliana]
gi|20453054|gb|AAM19772.1| AT5g61380/mfb13_150 [Arabidopsis thaliana]
gi|29028744|gb|AAO64751.1| At5g61380/mfb13_150 [Arabidopsis thaliana]
gi|332010077|gb|AED97460.1| two-component response regulator-like APRR1 [Arabidopsis thaliana]
Length = 618
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D+D T L + +L C Y VT A +D L D++L+++ +P
Sbjct: 19 VRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEIDLPMAK 78
Query: 94 GFKLLEHIGLEMDL---PVITDGR---VSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G K+L +I + DL PVI R V V++ ++ GA DYL+KP+R EL N+W H+
Sbjct: 79 GMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMW 138
Query: 148 RKR 150
R+R
Sbjct: 139 RRR 141
>gi|71067066|dbj|BAE16285.1| SbPCL1 [Sorghum bicolor]
Length = 200
Score = 85.1 bits (209), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/65 (61%), Positives = 51/65 (78%), Gaps = 5/65 (7%)
Query: 215 TKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFR 274
+K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLTRENVASH LQK+R
Sbjct: 141 SKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASH-----LQKYR 195
Query: 275 LYLKR 279
LY+KR
Sbjct: 196 LYVKR 200
>gi|357131277|ref|XP_003567265.1| PREDICTED: uncharacterized protein LOC100824981 [Brachypodium
distachyon]
Length = 207
Score = 84.7 bits (208), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/66 (65%), Positives = 50/66 (75%), Gaps = 5/66 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK R+VW+ ELH++FV AV LG AVPK I+ LMNV GLTRENVASH LQK+RL
Sbjct: 100 KKARMVWTTELHRRFVEAVAHLGEKGAVPKAIVRLMNVDGLTRENVASH-----LQKYRL 154
Query: 276 YLKRLN 281
YLKRL+
Sbjct: 155 YLKRLH 160
>gi|449450912|ref|XP_004143206.1| PREDICTED: uncharacterized protein LOC101203812 [Cucumis sativus]
gi|449496718|ref|XP_004160206.1| PREDICTED: uncharacterized protein LOC101226439 [Cucumis sativus]
Length = 297
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%), Gaps = 5/66 (7%)
Query: 214 TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 273
T K+PR+ W+ +LH++FV V+ LG+ A PK I+++MNV GLTRENVASH LQK+
Sbjct: 147 TLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQMMNVEGLTRENVASH-----LQKY 201
Query: 274 RLYLKR 279
RLYLKR
Sbjct: 202 RLYLKR 207
>gi|302854384|ref|XP_002958700.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
gi|300255940|gb|EFJ40220.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
Length = 124
Score = 84.7 bits (208), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/122 (37%), Positives = 70/122 (57%), Gaps = 9/122 (7%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL---RERKGCFDVVLSDVHMP 90
VL+V+DD L+ +EQ+LR+C Y VT + A+ +L R D++L+D+ MP
Sbjct: 3 FHVLLVEDDRVTLKTVEQLLRKCNYKVTCAANGREAIKVLTACRHSGVKVDLILTDILMP 62
Query: 91 DMDGFKLLE---HIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
++ GF L+ H D+PV+ + V++ + GA DYLIKPIR+ EL +WQ
Sbjct: 63 EVTGFDLINEVVHGDTFCDVPVVVMSSQDSQENVLQAFQAGAADYLIKPIRKNELATLWQ 122
Query: 145 HV 146
HV
Sbjct: 123 HV 124
>gi|449486993|ref|XP_004157464.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR1-like [Cucumis sativus]
Length = 557
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 81/148 (54%), Gaps = 9/148 (6%)
Query: 9 QSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAV 68
+ GG G G D + D+ + +R+L+ D+D + ++L +C Y V + S A
Sbjct: 10 EDCGGCGSGGKNXGDGFI-DR--SKVRILLCDNDSKSSEEVFKLLLKCSYQVISVSSARQ 66
Query: 69 ALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGI 122
+D L D++LS+V +P G K+L++I + +L PVI T V V++ +
Sbjct: 67 VIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVPIVVKCL 126
Query: 123 RHGACDYLIKPIREEELKNIWQHVVRKR 150
R GA DYL+KP+R EL N+W H+ R+R
Sbjct: 127 RLGAADYLVKPLRTNELLNLWTHMWRRR 154
>gi|224124202|ref|XP_002330130.1| pseudo response regulator [Populus trichocarpa]
gi|222871264|gb|EEF08395.1| pseudo response regulator [Populus trichocarpa]
Length = 541
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 72/125 (57%), Gaps = 6/125 (4%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D+D + + +L +C Y VT+ A +D L D++LS+V +P
Sbjct: 23 SKVRILLCDNDAKSSQEVFTLLLKCSYQVTSVRSARQVIDALNAEGPEIDIILSEVDIPM 82
Query: 92 MDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
G K+L++I + DL PVI VS V++ +R GA DYL+KP+R EL N+W H
Sbjct: 83 TKGMKMLKYIMRDKDLRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTH 142
Query: 146 VVRKR 150
+ R+R
Sbjct: 143 MWRRR 147
>gi|224098134|ref|XP_002311124.1| predicted protein [Populus trichocarpa]
gi|222850944|gb|EEE88491.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +LR C Y VT S A +L++ D+VL++V MP +
Sbjct: 37 LKVLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQDLTNHIDLVLTEVAMPCLS 96
Query: 94 GFKLLEHIGLEM---DLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I ++PVI + ++ V + + GA D+L+KPIR+ ELK +WQHV
Sbjct: 97 GIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIRKNELKILWQHVW 156
Query: 148 RK 149
RK
Sbjct: 157 RK 158
>gi|224098126|ref|XP_002311123.1| pseudo response regulator [Populus trichocarpa]
gi|222850943|gb|EEE88490.1| pseudo response regulator [Populus trichocarpa]
Length = 766
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +LR C Y VT S A +L++ D+VL++V MP +
Sbjct: 92 LKVLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQDLTNHIDLVLTEVAMPCLS 151
Query: 94 GFKLLEHIGLEM---DLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I ++PVI + ++ V + + GA D+L+KPIR+ ELK +WQHV
Sbjct: 152 GIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAVDFLVKPIRKNELKILWQHVW 211
Query: 148 RK 149
RK
Sbjct: 212 RK 213
>gi|326522564|dbj|BAK07744.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 759
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D ++ +LR+C Y V + A L + + D+VL++V MP +
Sbjct: 83 LRVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQNRIDLVLTEVAMPCLS 142
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + +PVI + +S V + + GA D+L+KPIR+ ELK +WQH+
Sbjct: 143 GIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDFLVKPIRKNELKTLWQHIW 202
Query: 148 RK 149
R+
Sbjct: 203 RR 204
>gi|159487405|ref|XP_001701713.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280932|gb|EDP06688.1| predicted protein [Chlamydomonas reinhardtii]
Length = 61
Score = 84.3 bits (207), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 50/64 (78%), Gaps = 5/64 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KKPR+ WS ELH +F++A+ QLGI AVPK IL+LMNV GLTRENVASH LQK+R+
Sbjct: 3 KKPRINWSQELHARFLNAMFQLGIKNAVPKTILQLMNVEGLTRENVASH-----LQKYRI 57
Query: 276 YLKR 279
LKR
Sbjct: 58 LLKR 61
>gi|381149249|gb|AFF60407.1| golden 2-like 1 transcription factor [Solanum phureja]
Length = 460
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 181 SVNEGTEGTFKAQRKRISAKEEDDGELESDDPST--TKKPRVVWSVELHQQFVSAVNQLG 238
S + E T + + I+ KE D G+ S + + +K +V W+ ELH++FV AV QLG
Sbjct: 135 STQKSEESTLQVNQNIITPKESDKGKKSSKNNNLPGKRKVKVDWTPELHRRFVQAVEQLG 194
Query: 239 IDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRL 280
+DKAVP RILE+M + LTR N+ASHLQ QK+R + K L
Sbjct: 195 VDKAVPSRILEIMGIDCLTRHNIASHLQ----QKYRSHRKHL 232
>gi|255582079|ref|XP_002531836.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223528532|gb|EEF30556.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 807
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 88/165 (53%), Gaps = 19/165 (11%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +LR C Y V + A IL + D+VL++V MP +
Sbjct: 74 LKVLLVENDDSTRHVVSALLRNCSYEVNAVANGFQAWKILEDMNNHTDLVLTEVVMPILS 133
Query: 94 GFKLL----EHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL H L ++PVI + + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 134 GIGLLCKIRNHKTLR-NIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHV 192
Query: 147 VRK----------RWNENKEHENSGSLEETDHHKRGSDEI-EYAS 180
R+ + K+ + S EE++++ SDE+ +Y S
Sbjct: 193 WRRCHSSSGSGSESGTQTKKSAKTKSNEESENNSDSSDELGDYGS 237
>gi|255568450|ref|XP_002525199.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223535496|gb|EEF37165.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 762
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 69/122 (56%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +LR C Y V + A IL + D+VL++V MP +
Sbjct: 88 LKVLLVENDYSTRHVVTALLRNCSYEVIEATNGLQAWRILEDLTNQIDLVLTEVVMPCLS 147
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I ++PVI + + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 148 GIGLLYKIMSHKTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 207
Query: 148 RK 149
R+
Sbjct: 208 RR 209
>gi|297793691|ref|XP_002864730.1| hypothetical protein ARALYDRAFT_496297 [Arabidopsis lyrata subsp.
lyrata]
gi|297310565|gb|EFH40989.1| hypothetical protein ARALYDRAFT_496297 [Arabidopsis lyrata subsp.
lyrata]
Length = 623
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D+D L + +L C Y VT+ A +D L D++L+++ +P
Sbjct: 19 VRILLCDNDSKSLGEVFTLLSECSYQVTSVKSARQVIDALNAEGPDIDIILAEIDLPMAK 78
Query: 94 GFKLLEHIGLEMDL---PVITDGR---VSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G K+L +I + DL PVI R V V++ ++ GA DYL+KP+R EL N+W H+
Sbjct: 79 GMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMW 138
Query: 148 RKR 150
R+R
Sbjct: 139 RRR 141
>gi|307109141|gb|EFN57379.1| hypothetical protein CHLNCDRAFT_142774 [Chlorella variabilis]
Length = 998
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 75/127 (59%), Gaps = 7/127 (5%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILR-ERKGCFDVVLSDVHM 89
P+ VL+VDD+ +L +L +C Y VT+ S AL +LR F +VL+DV M
Sbjct: 45 PSSCHVLLVDDERLTRTVLSSLLLKCGYRVTSASDGLEALRLLRGSAPDTFQLVLTDVCM 104
Query: 90 PDMDGFKLLEHIGLEMDL---PVITDGRV---SAVMRGIRHGACDYLIKPIREEELKNIW 143
P+++G +LL + + +L PV+ V V ++ GA +YL+KP+ ++E+++IW
Sbjct: 105 PELNGIQLLSCVKQDANLRAVPVVMMSSVDQEETVAECVQQGAEEYLVKPVTKKEVQHIW 164
Query: 144 QHVVRKR 150
QHV RKR
Sbjct: 165 QHVWRKR 171
>gi|34499879|gb|AAQ73525.1| timing of CAB expression 1 [Mesembryanthemum crystallinum]
Length = 544
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 6/125 (4%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D+D + +L C Y VT A +D L D++LS+V +P
Sbjct: 27 SKVRILLCDNDSKSCEEVFGLLSNCSYQVTAVRSARQVIDALNAEGPDIDIILSEVDLPT 86
Query: 92 MDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
G K+L++I + DL PVI T VS V++ +R GA DYL+KP+R E+ N+W H
Sbjct: 87 KKGLKMLKYIMRDRDLQRIPVIMMSTQDEVSLVVKCLRLGAADYLVKPLRTNEMLNLWTH 146
Query: 146 VVRKR 150
+ R+R
Sbjct: 147 MWRRR 151
>gi|297810367|ref|XP_002873067.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
gi|297318904|gb|EFH49326.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
Length = 733
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 17/164 (10%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+V++D I+ +LR C Y V S A +L + D+VL++V MP +
Sbjct: 85 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 144
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I ++PVI + + V + + GA D+L+KPIR+ ELK +WQHV
Sbjct: 145 GISLLSKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVW 204
Query: 148 RK-----------RWNENKEHENSGSLEETDHHKRGSDEIEYAS 180
R+ ++ ++ S S+ ++DH R S E E S
Sbjct: 205 RRCQSSSGSGSESGTHQTQKSVKSKSIRKSDHDSRSSGENENGS 248
>gi|319657108|gb|ADV58932.1| pseudo-response regulator 7-like protein [Beta vulgaris subsp.
vulgaris]
Length = 718
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 73/123 (59%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+V++D + ++ +LR C Y V S A IL + + D+VL++V MP +
Sbjct: 84 VRVLLVENDDSTRHVVAALLRNCCYEVVEASNGLQAWKILEDIENRIDLVLTEVVMPCVS 143
Query: 94 G----FKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G FK++ H + ++PV+ + + V + + GA D+L+KPIR+ ELKN+WQH+
Sbjct: 144 GIALLFKIMSHKSRK-NVPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHL 202
Query: 147 VRK 149
R+
Sbjct: 203 WRR 205
>gi|303271521|ref|XP_003055122.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
gi|226463096|gb|EEH60374.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
Length = 1334
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 95/188 (50%), Gaps = 28/188 (14%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ VL+VDD +LRRC Y VTT S A+ +L ER F+++L+DV MPD+D
Sbjct: 10 VHVLLVDD--------AGLLRRCQYQVTTASSGREAMALL-ERGTQFNLLLTDVMMPDVD 60
Query: 94 GFKLLEHIG---LEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL + L ++PV+ ++ VM IR GA DY+IKP+ + +K++W HV
Sbjct: 61 GPTLLHFVRNNPLYAEMPVVMMSSNEHADMVMNCIRLGAEDYIIKPVTNKAVKHMWAHVW 120
Query: 148 RK--RWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEG--TFKAQRKRISAKEED 203
R+ R+ EN ++E E E+ ++ E G +A + EE
Sbjct: 121 RRKQRYQMVPRFENGREVDE---------EREFEAAAMEELRGGVDLEAGMLPVPETEEY 171
Query: 204 DGELESDD 211
+ ESDD
Sbjct: 172 SSDGESDD 179
>gi|351722597|ref|NP_001235202.1| timing of CAB expression 1 [Glycine max]
gi|158999372|gb|ABW87010.1| timing of CAB expression 1 [Glycine max]
Length = 558
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 71/123 (57%), Gaps = 6/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D+D + + +L RC Y VT+ A +D L D++L+++ +P
Sbjct: 28 VRILLCDNDSKSSQEVFTLLLRCSYQVTSVKSARQVIDALNAEGQHIDIILAELDLPMKK 87
Query: 94 GFKLLEHIGLEMD---LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G K+L++I + + +PVI VS V++ +R GA DYL+KP+R EL N+W H+
Sbjct: 88 GMKMLKYIARDKEFRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMW 147
Query: 148 RKR 150
R+R
Sbjct: 148 RRR 150
>gi|356508533|ref|XP_003523010.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 560
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 71/123 (57%), Gaps = 6/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D+D + + +L RC Y VT+ A +D L D++L+++ +P
Sbjct: 30 VRILLCDNDSKSSQEVFTLLLRCSYQVTSVKSARQVIDALNAEGQHIDIILAELDLPMKK 89
Query: 94 GFKLLEHIGLEMD---LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G K+L++I + + +PVI VS V++ +R GA DYL+KP+R EL N+W H+
Sbjct: 90 GMKMLKYIAQDKEFRRIPVIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMW 149
Query: 148 RKR 150
R+R
Sbjct: 150 RRR 152
>gi|281308382|gb|ADA58339.1| pseudo-response regulator 1a [Brassica rapa]
Length = 576
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 70/123 (56%), Gaps = 6/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D+D L + +L +C Y VT+ A +D L D++L+++ +P
Sbjct: 21 VRILLCDNDPNSLGEVFTLLSQCSYQVTSVKSARQVIDALNAEGPDIDIILAEIDLPMAK 80
Query: 94 GFKLLEHIGLEMDL---PVITDGR---VSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G K+L +I + DL PVI R V V++ ++ GA DYL+KP+R EL N+W H+
Sbjct: 81 GMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMW 140
Query: 148 RKR 150
R+R
Sbjct: 141 RRR 143
>gi|157399678|gb|ABV53463.1| pseudo-response regulator 7 [Castanea sativa]
Length = 784
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +LR C Y VT A IL + D+VL++V MP +
Sbjct: 98 LKVLLVENDDSTRHVVSALLRNCGYEVTAAENGLQAWKILEDYTTHVDLVLTEVVMPCLS 157
Query: 94 GFKLLEHIGLEM---DLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I ++PVI + ++ V + + GA D+L KPIR+ ELKN+WQHV
Sbjct: 158 GIGLLSKIMSHKTCKNIPVIMMSSYDSMNIVFKCLSKGAVDFLAKPIRKNELKNLWQHVW 217
Query: 148 RK 149
RK
Sbjct: 218 RK 219
>gi|356559647|ref|XP_003548110.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 706
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 76/124 (61%), Gaps = 11/124 (8%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C+ V A + L+++ D++L++V +P +
Sbjct: 32 LRVLLVEADHSTRQIIAALLRKCIIAVP---DGLKAWETLKKKASELDLILTEVELPAIS 88
Query: 94 GFKLLEHIGLEMDL----PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
GF LL I +E D+ PVI + V+ ++ + +GA D+LIKPIR+ EL+N+WQHV
Sbjct: 89 GFALLSLI-MEHDICKSIPVIMMSSHDSVNMALKCMLNGAVDFLIKPIRKNELRNLWQHV 147
Query: 147 VRKR 150
R+
Sbjct: 148 WRRH 151
>gi|85860540|ref|YP_462742.1| sigma-54-dependent transcriptional regulator [Syntrophus
aciditrophicus SB]
gi|85723631|gb|ABC78574.1| sigma-54-dependent transcriptional regulator [Syntrophus
aciditrophicus SB]
Length = 443
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R++V+DDD L++ LRR Y+V C+ A D+L+ +D+V+SD+ MPDMD
Sbjct: 3 IRIIVIDDDAVACEFLQEALRRADYDVDICTSAR---DVLKGDLSRYDLVISDIRMPDMD 59
Query: 94 GFKLLEHIGLEMD-LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
G +LL I + LPVI G + + M ++ GA DY+ KP E ++N+ + V+
Sbjct: 60 GLQLLRRIHQQWPALPVILMTAYGSLESTMEALQLGAWDYISKPFSPEAIRNMVKKVLGM 119
Query: 150 RWNENKEHENSGSLEETD 167
R E + H + GS E +
Sbjct: 120 R--ELQRHRSQGSPAEKE 135
>gi|449439291|ref|XP_004137419.1| PREDICTED: two-component response regulator-like APRR1-like
[Cucumis sativus]
Length = 557
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 72/125 (57%), Gaps = 6/125 (4%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D+D + ++L +C Y V + S A +D L D++LS+V +P
Sbjct: 30 SKVRILLCDNDSKSSEEVFKLLLKCSYQVISVSSARQVIDALNAEGPEIDIILSEVDLPM 89
Query: 92 MDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
G K+L++I + +L PVI T V V++ +R GA DYL+KP+R EL N+W H
Sbjct: 90 AKGMKMLKYITRDKELRRIPVIMMSTQDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTH 149
Query: 146 VVRKR 150
+ R+R
Sbjct: 150 MWRRR 154
>gi|356545957|ref|XP_003541399.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 749
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V+ D + ++ +LR C Y V + A IL + D++L++V MP +
Sbjct: 81 LKVLLVEYDDSTRHVVTALLRNCSYEVIDAANGLQAWKILEDLTNHIDLILTEVAMPGLS 140
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I ++PV+ + + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 141 GIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 148 RK 149
R+
Sbjct: 201 RR 202
>gi|356536913|ref|XP_003536977.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 747
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V+ D + ++ +LR C Y V + A IL + D+VL++V MP +
Sbjct: 79 LKVLLVEIDDSTRHVVTALLRNCSYEVIEAANGLQAWKILEDLTNHIDLVLTEVAMPGLS 138
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I ++PV+ + + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 139 GIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 198
Query: 148 RK 149
R+
Sbjct: 199 RR 200
>gi|375126877|gb|AFA35965.1| timing of cab expression 1/pseudo-response regulator 1 [Nicotiana
attenuata]
Length = 551
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 27/213 (12%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D D + + +L +C Y VT+ +D L D++LS+V +P
Sbjct: 17 SKVRILLCDKDAKSSQEVFTLLCKCSYQVTSARSPRQVIDALNAEGPEIDIILSEVDLPM 76
Query: 92 MDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
G+K+L++I + +L PVI VS V++ ++ GA DYL+KP+R EL N+W H
Sbjct: 77 SKGYKMLKYIMRDKELRRIPVIMMSAQDEVSIVVKCLKFGAADYLVKPLRTNELLNLWTH 136
Query: 146 VVRKRW-------------------NENKEHENSGSL--EETDHHKRGSDEIEYASSVNE 184
+ R+R + + + NS +L ++TD R S +E S+ +
Sbjct: 137 MWRRRQMLGLAEKNILSYDFDLVVSDPSDPNTNSTTLFSDDTDDRSRKSVNLEACPSIQQ 196
Query: 185 GTEGTFKAQRKRISAKEEDDGELESDDPSTTKK 217
E + I E +SD P T ++
Sbjct: 197 EDEVSASTTAAHIETTHVFPSECQSDVPGTNER 229
>gi|224112925|ref|XP_002316333.1| pseudo response regulator [Populus trichocarpa]
gi|222865373|gb|EEF02504.1| pseudo response regulator [Populus trichocarpa]
Length = 763
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +LR C Y T + A +L++ D+VL++V MP +
Sbjct: 89 LKVLLVENDDSTRHVVSALLRNCGYEATAVANGLQAWKLLQDLTNHIDLVLTEVAMPCLS 148
Query: 94 GFKLLEHIGLEM---DLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL +I ++PVI + ++ V R + GA D+L+KPIR+ ELK +WQHV
Sbjct: 149 GIGLLSNIMSHKTCRNIPVIMMSSHDSMNVVFRCLSKGAVDFLVKPIRKNELKILWQHVW 208
Query: 148 RK 149
R+
Sbjct: 209 RR 210
>gi|255547335|ref|XP_002514725.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223546329|gb|EEF47831.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 550
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 71/125 (56%), Gaps = 6/125 (4%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D+D + +L +C Y VT+ A +D L D++LS+V +P
Sbjct: 20 SKVRILLCDNDSKSSEEVFTLLLKCSYQVTSVRSARQVIDALNAEGPDIDIILSEVDLPM 79
Query: 92 MDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
G K+L++I + +L PVI VS V++ +R GA DYL+KP+R EL N+W H
Sbjct: 80 NKGMKMLKYITRDKELRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTH 139
Query: 146 VVRKR 150
+ R+R
Sbjct: 140 MWRRR 144
>gi|449524812|ref|XP_004169415.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 794
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +LR C Y V + A +L + D+VL++V MP +
Sbjct: 89 LKVLLVENDDSTRHLVTALLRNCSYEVIAAANGLHAWKMLEDLTNHIDLVLTEVVMPCLS 148
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I ++PVI + + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 149 GIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 208
Query: 148 RK 149
R+
Sbjct: 209 RR 210
>gi|308809964|ref|XP_003082291.1| ARR1 like protein (ISS) [Ostreococcus tauri]
gi|116060759|emb|CAL57237.1| ARR1 like protein (ISS) [Ostreococcus tauri]
Length = 205
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQE--INLQKF 273
K+ R+VW+ LH QFV+ V +LG+D AVPK I+++MNV GLTRENVASHLQ+ INL++
Sbjct: 74 KRARLVWTPALHAQFVAPVEKLGVDAAVPKSIMKIMNVEGLTRENVASHLQKYRINLKRK 133
Query: 274 RLYLKRLNGVSQQGGITNSF 293
+ + G+ G T S
Sbjct: 134 KFSSESTEGLDDTDGDTRSM 153
>gi|225439773|ref|XP_002275837.1| PREDICTED: two-component response regulator-like APRR7 [Vitis
vinifera]
gi|297741496|emb|CBI32628.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 73/124 (58%), Gaps = 6/124 (4%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
RVL+V++D + ++ +LR C Y VT S A IL++ D+VL++V++P + G
Sbjct: 59 RVLLVENDDSTRYVIGALLRNCGYQVTETSNGLQAWRILKDTSNHIDLVLTEVNLPRLSG 118
Query: 95 FKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 148
LL I ++PVI T + V++ + GA D+L+KP+R+ ELK +WQH+ R
Sbjct: 119 IALLCKIMNHKTRKNIPVIMMSTHDSGALVLKCLSKGATDFLVKPVRKNELKFLWQHIWR 178
Query: 149 KRWN 152
+R N
Sbjct: 179 RRQN 182
>gi|51571875|dbj|BAD38854.1| pseudo-response regulator 1 [Oryza sativa Japonica Group]
Length = 518
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 6/125 (4%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D D + R + ++L C Y VT +++L G D++L++V +P
Sbjct: 26 SKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPV 85
Query: 92 MDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
FK+L++I +L P+I VS V++ +R GA +YL+KP+R EL N+W H
Sbjct: 86 SKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 145
Query: 146 VVRKR 150
V R+R
Sbjct: 146 VWRRR 150
>gi|356513521|ref|XP_003525462.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 559
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 6/125 (4%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D+D + +L C Y VT+ A +D L D++L++V +P
Sbjct: 35 SKVRILLCDNDSKSSEEVFALLLGCSYQVTSVRSARQVIDALNAEGQYIDIILAEVDLPI 94
Query: 92 MDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
G KLL++I + +L PVI VS V++ +R GA DYL+KP+R EL N+W H
Sbjct: 95 KKGMKLLKYIARDKELCRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTH 154
Query: 146 VVRKR 150
+ R+R
Sbjct: 155 MWRRR 159
>gi|6996313|emb|CAB75508.1| ABI3-interacting protein, AIP1 [Arabidopsis thaliana]
Length = 618
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D+D T L + +L C Y VT A +D L D++L+++ +P
Sbjct: 19 VRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEIDLPMAK 78
Query: 94 GFKLLEHIGLEMDL---PVITDGR---VSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G K+L +I + DL PVI R V V++ ++ GA DYL+KP+ EL N+W H+
Sbjct: 79 GMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLLTNELLNLWTHMW 138
Query: 148 RKR 150
R+R
Sbjct: 139 RRR 141
>gi|351729027|ref|ZP_08946718.1| CheA signal transduction histidine kinase [Acidovorax radicis N35]
Length = 2017
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 83/154 (53%), Gaps = 12/154 (7%)
Query: 2 AALQRIVQSSGGSGYGSSRAA-DVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNV 60
A L ++++ G SG G S + +A P Q P VLVVDD IT R+ +++L+R Y V
Sbjct: 1862 AGLPSVLEADGSSGAGKSVVSPQLAGPSQVPL---VLVVDDSITVRRVTQRLLQREGYRV 1918
Query: 61 TTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHI---GLEMDLPVI-TDGRVS 116
+ AL+ L+E + VVLSD+ MP MDGF L +I G DLP+I R++
Sbjct: 1919 ALAADGLQALERLQEERPT--VVLSDIEMPRMDGFDLARNIRADGALRDLPIIMITSRIA 1976
Query: 117 AVMR--GIRHGACDYLIKPIREEELKNIWQHVVR 148
R + G YL KP +EEL ++ QH R
Sbjct: 1977 EKHREHAMELGVNHYLGKPYSDEELLSLIQHYAR 2010
>gi|115447337|ref|NP_001047448.1| Os02g0618200 [Oryza sativa Japonica Group]
gi|68565719|sp|Q689G9.2|PRR1_ORYSJ RecName: Full=Two-component response regulator-like PRR1; AltName:
Full=Pseudo-response regulator 1; Short=OsPRR1
gi|47847546|dbj|BAD21598.1| putative timing of CAB expression 1 [Oryza sativa Japonica Group]
gi|47847675|dbj|BAD21456.1| putative timing of CAB expression 1 [Oryza sativa Japonica Group]
gi|113536979|dbj|BAF09362.1| Os02g0618200 [Oryza sativa Japonica Group]
gi|222623253|gb|EEE57385.1| hypothetical protein OsJ_07546 [Oryza sativa Japonica Group]
Length = 518
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 6/125 (4%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D D + R + ++L C Y VT +++L G D++L++V +P
Sbjct: 26 SKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPV 85
Query: 92 MDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
FK+L++I +L P+I VS V++ +R GA +YL+KP+R EL N+W H
Sbjct: 86 SKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 145
Query: 146 VVRKR 150
V R+R
Sbjct: 146 VWRRR 150
>gi|357482307|ref|XP_003611439.1| Two-component response regulator-like protein [Medicago truncatula]
gi|355512774|gb|AES94397.1| Two-component response regulator-like protein [Medicago truncatula]
Length = 543
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 47/60 (78%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK +V W+ ELH++FV AV QLGID+A+P RILELM V GLTR NVASHLQ+ + K ++
Sbjct: 310 KKMKVDWTAELHKKFVKAVEQLGIDQAIPSRILELMKVDGLTRHNVASHLQKYRMHKRQI 369
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVL+++ D + L YNV+T AL + CF V + +V +
Sbjct: 14 FPKGLRVLLLEGDNNSASEIRTKLESMDYNVSTFYNENEALSAISSSPKCFHVAIVEVSI 73
Query: 90 --PDMDGFKLLEHIGLEMDLPVITDGR---VSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
PD GFK LE+ DLP I ++ +M+ I GA ++L KP+ E++LKNIWQ
Sbjct: 74 SCPD-GGFKFLENAK---DLPTIMTSNSQCINTMMKCIALGAVEFLTKPLSEDKLKNIWQ 129
Query: 145 HVVRKRWN 152
HVV K +N
Sbjct: 130 HVVHKAFN 137
>gi|449513573|ref|XP_004164360.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR2-like [Cucumis sativus]
Length = 559
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 55/77 (71%), Gaps = 4/77 (5%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK +V W+ ELH++FV AV QLG+++A+P RILELM V GLTR NVASHLQ QK+R+
Sbjct: 313 KKLKVDWTPELHRKFVQAVEQLGVNQAIPSRILELMKVEGLTRHNVASHLQ----QKYRM 368
Query: 276 YLKRLNGVSQQGGITNS 292
+ + + + G ++S
Sbjct: 369 HKRHILPKEEDGSWSHS 385
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVL++D D + ++ L Y V T AL + + F V + +V
Sbjct: 14 FPKGLRVLLLDGDTSSAAEIKTKLEEMEYVVVTYCNENDALSAISSKPETFHVAIVEVTT 73
Query: 90 PDMDG-FKLLEHIGLEMDLPVITDGRV---SAVMRGIRHGACDYLIKPIREEELKNIWQH 145
+ +G FK LE DLP I + S +M+ I GA ++L KP+ +++L+NIWQH
Sbjct: 74 SNHEGNFKFLE---AAKDLPTIMISNIHCLSTMMKCIALGAMEFLQKPLSDDKLRNIWQH 130
Query: 146 VVRKRWN 152
VV K +N
Sbjct: 131 VVHKAFN 137
>gi|218191182|gb|EEC73609.1| hypothetical protein OsI_08092 [Oryza sativa Indica Group]
Length = 518
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 6/125 (4%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D D + R + ++L C Y VT +++L G D++L++V +P
Sbjct: 26 SKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPV 85
Query: 92 MDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
FK+L++I +L P+I VS V++ +R GA +YL+KP+R EL N+W H
Sbjct: 86 SKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 145
Query: 146 VVRKR 150
V R+R
Sbjct: 146 VWRRR 150
>gi|449464910|ref|XP_004150172.1| PREDICTED: two-component response regulator-like APRR2-like
[Cucumis sativus]
Length = 560
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 55/77 (71%), Gaps = 4/77 (5%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK +V W+ ELH++FV AV QLG+++A+P RILELM V GLTR NVASHLQ QK+R+
Sbjct: 313 KKLKVDWTPELHRKFVQAVEQLGVNQAIPSRILELMKVEGLTRHNVASHLQ----QKYRM 368
Query: 276 YLKRLNGVSQQGGITNS 292
+ + + + G ++S
Sbjct: 369 HKRHILPKEEDGSWSHS 385
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVL++D D + ++ L Y V T AL + + F V + +V
Sbjct: 14 FPKGLRVLLLDGDTSSAAEIKTKLEEMEYVVVTYCNENDALSAISSKPETFHVAIVEVTT 73
Query: 90 PDMDG-FKLLEHIGLEMDLPVITDGRV---SAVMRGIRHGACDYLIKPIREEELKNIWQH 145
+ +G FK LE DLP I + S +M+ I GA ++L KP+ +++L+NIWQH
Sbjct: 74 SNHEGNFKFLE---AAKDLPTIMISNIHCLSTMMKCIALGAMEFLQKPLSDDKLRNIWQH 130
Query: 146 VVRKRWN 152
VV K +N
Sbjct: 131 VVHKAFN 137
>gi|424513385|emb|CCO66007.1| predicted protein [Bathycoccus prasinos]
Length = 738
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 47/55 (85%)
Query: 219 RVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 273
R+VW+ ELH++F++AVN LG+D AVPK I+++MNV GLTRENVASHLQ+ L++
Sbjct: 508 RLVWNDELHRRFMNAVNHLGLDAAVPKTIMQMMNVEGLTRENVASHLQKYRLKQM 562
>gi|384252672|gb|EIE26148.1| hypothetical protein COCSUDRAFT_61138 [Coccomyxa subellipsoidea
C-169]
Length = 444
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 76/159 (47%), Gaps = 18/159 (11%)
Query: 2 AALQRIVQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVT 61
A L+RI SG G FP GL+VLVVD D + + L Q L Y V+
Sbjct: 3 AGLKRIPSFSGRPG--------------FPNGLQVLVVDGDTSSSQCLRQKLEELAYEVS 48
Query: 62 TCSQAAVALDILRERKGCFDVVLSDVHM---PDMDGFKLLEHIG-LEMDLPVITDGRVSA 117
CS + A +LR+ +D++L + DG L + L + L A
Sbjct: 49 CCSSGSDASALLRKEDSSYDILLVEAKALAKDATDGGSLRDSAAHLPLVLMSEKSSSTDA 108
Query: 118 VMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKE 156
V RGI GA D L KP+ +L+NIWQHVVRK + +++
Sbjct: 109 VWRGIELGAADVLEKPLSSLKLRNIWQHVVRKMMSSSQD 147
>gi|419193836|gb|AFX68729.1| APRR2-like protein [Solanum lycopersicum]
Length = 560
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 51/68 (75%), Gaps = 5/68 (7%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 272
S KK +V W+ ELH++FV AV QLGID+A+P RIL+LM V GLTR NVASH LQK
Sbjct: 312 SNRKKIKVDWTPELHKKFVQAVEQLGIDQAIPSRILDLMKVEGLTRHNVASH-----LQK 366
Query: 273 FRLYLKRL 280
+R++ K++
Sbjct: 367 YRMHRKQI 374
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GL+VL++D+D ++ L + Y V + + AL + + F V + +V
Sbjct: 14 FPKGLKVLLLDEDSNSAAEMKSRLEKMDYIVYSFCNESEALTAISSKSEGFHVAIVEVSA 73
Query: 90 PDMDGFKLLEHIGLEMDLPVITDGRV---SAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
+ DG +L + DLP I + S +M+ I GA ++L KP+ +++LKNIWQHV
Sbjct: 74 GNSDG--VLRFLESAKDLPTIMTSNIHSLSTMMKCIALGAVEFLQKPLSDDKLKNIWQHV 131
Query: 147 VRKRWNENKE 156
V K +N K+
Sbjct: 132 VHKAFNTRKD 141
>gi|414879737|tpg|DAA56868.1| TPA: putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 304
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK R+ W+ ELH +FV+AV LG AVPK I+ LMNV GLTRENVASH LQK+R+
Sbjct: 196 KKARIAWTPELHNRFVAAVEHLGDKGAVPKAIVRLMNVEGLTRENVASH-----LQKYRI 250
Query: 276 YLK 278
YLK
Sbjct: 251 YLK 253
>gi|302813242|ref|XP_002988307.1| hypothetical protein SELMODRAFT_447266 [Selaginella moellendorffii]
gi|300144039|gb|EFJ10726.1| hypothetical protein SELMODRAFT_447266 [Selaginella moellendorffii]
Length = 508
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 73/123 (59%), Gaps = 6/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D D + ++++L RC Y V+ A +++L D+VLS+V +P+
Sbjct: 14 VRILLCDKDSATAQEVKELLCRCSYQVSVVKTARQVVEVLNITDSKVDLVLSEVELPNGR 73
Query: 94 GFKLLEHIGLEMD---LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
GFK+L+HI + +P++ ++ V++ ++ GA DYL+KP+R EL N+W H+
Sbjct: 74 GFKMLKHIVKSENFKHIPIVMMSARDEMAVVVKCLKLGAADYLVKPLRINELLNLWTHMW 133
Query: 148 RKR 150
R+R
Sbjct: 134 RRR 136
>gi|297796729|ref|XP_002866249.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312084|gb|EFH42508.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 445
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/94 (50%), Positives = 64/94 (68%), Gaps = 8/94 (8%)
Query: 191 KAQRKRISAKEEDDGELESDD--PSTTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRI 247
K Q + S ++E+DG+ + S T+ R VW+VELHQ+FV+AV QL G+DKA P++I
Sbjct: 18 KKQNEDDSDRKEEDGKGNEHNGMESCTRMKRTVWTVELHQKFVNAVQQLGGVDKASPEQI 77
Query: 248 LELMNVPGLTRENVASHLQEINLQKFRLYLKRLN 281
LMNV GL NVASH LQK+RLYLK+++
Sbjct: 78 HALMNVEGLPVINVASH-----LQKYRLYLKKID 106
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 43/50 (86%), Gaps = 1/50 (2%)
Query: 219 RVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQE 267
RVVWS ELHQ+F+ A++QLG DKA+PK+IL +MNV GLTR NVA+HLQ+
Sbjct: 342 RVVWSHELHQKFLHAIDQLGGNDKAIPKKILAVMNVEGLTRLNVATHLQK 391
>gi|347819602|ref|ZP_08873036.1| CheA signal transduction histidine kinase [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 1438
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 74/134 (55%), Gaps = 11/134 (8%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
A+ +A P Q P VLVVDD IT R+ +++L+R Y V + AL+ L+E +
Sbjct: 1303 ASPLAGPSQVPL---VLVVDDSITVRRVTQRLLQREGYRVALAADGLQALERLQEERPT- 1358
Query: 81 DVVLSDVHMPDMDGFKLLEHI---GLEMDLPVI-TDGRVSAVMR--GIRHGACDYLIKPI 134
VVLSD+ MP MDGF L +I G DLP+I R++ R I G YL KP
Sbjct: 1359 -VVLSDIEMPRMDGFDLARNIRADGALRDLPIIMITSRIAEKHREHAIELGVNHYLGKPY 1417
Query: 135 REEELKNIWQHVVR 148
+EEL N+ QH VR
Sbjct: 1418 SDEELLNLIQHYVR 1431
>gi|449461539|ref|XP_004148499.1| PREDICTED: two-component response regulator-like APRR2-like
[Cucumis sativus]
gi|449530967|ref|XP_004172463.1| PREDICTED: two-component response regulator-like APRR2-like
[Cucumis sativus]
Length = 521
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 48/69 (69%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 272
S KK +V W+ ELH+ FV AV QLGID A+P +ILELM V GLTR N+ASHLQ+ +QK
Sbjct: 274 SKAKKTKVDWTPELHRNFVQAVEQLGIDHAIPSKILELMKVEGLTRHNIASHLQKYRMQK 333
Query: 273 FRLYLKRLN 281
+ + N
Sbjct: 334 KHVMQREEN 342
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 8/145 (5%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
A D+ FP GLRVL++D D + L Y V +C+ A + G F
Sbjct: 5 ADDLQEWKDFPKGLRVLLLDRDSFSATEIRSKLEEMEYVVYSCTDEKEASSAILNTPGNF 64
Query: 81 DVVLSDVHMPDMD-GFKLLEHIGLEMDLPVITDGRV---SAVMRGIRHGACDYLIKPIRE 136
V + +V + D FKLL G DLP+I V S +M+ I GA ++L+KP+ E
Sbjct: 65 HVAILEVCARNYDESFKLL---GASKDLPIIMTSDVHCLSTMMKCIALGAVEFLLKPLSE 121
Query: 137 EELKNIWQHVVRKRW-NENKEHENS 160
++L+NIWQHV+ K + N +K E+S
Sbjct: 122 DKLRNIWQHVIHKAYSNSSKPDEDS 146
>gi|302760961|ref|XP_002963903.1| hypothetical protein SELMODRAFT_438647 [Selaginella moellendorffii]
gi|300169171|gb|EFJ35774.1| hypothetical protein SELMODRAFT_438647 [Selaginella moellendorffii]
Length = 505
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 73/123 (59%), Gaps = 6/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D D + ++++L RC Y V+ A +++L D+VLS+V +P+
Sbjct: 14 VRILLCDKDSATAQEVKELLCRCSYQVSVVKTARQVVEVLNITDSKVDLVLSEVELPNGR 73
Query: 94 GFKLLEHIGLEMD---LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
GFK+L+HI + +P++ ++ V++ ++ GA DYL+KP+R EL N+W H+
Sbjct: 74 GFKMLKHIVKSENFKHIPIVMMSARDEMAVVVKCLKLGAADYLVKPLRINELLNLWTHMW 133
Query: 148 RKR 150
R+R
Sbjct: 134 RRR 136
>gi|381149245|gb|AFF60405.1| golden 2-like 1 transcription factor [Capsicum annuum]
Length = 447
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 78/128 (60%), Gaps = 15/128 (11%)
Query: 163 LEETDHHKRGSDEIEYA-SSVNEGTE--GTFKAQ------RKRISAKEEDDGELES-DDP 212
+E D +R + ++ +S+N+G E T K++ ++ I+ KE D G+ S ++
Sbjct: 98 VERKDETERAASDVGSGLTSLNQGEEIVSTQKSEESTLQVKQNITPKESDKGKKSSKNNL 157
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 272
+K +V W+ ELH++FV AV QLG+DKAVP RILE+M + LTR N+ASH LQK
Sbjct: 158 PVKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASH-----LQK 212
Query: 273 FRLYLKRL 280
+R + K L
Sbjct: 213 YRSHRKHL 220
>gi|115441007|ref|NP_001044783.1| Os01g0844900 [Oryza sativa Japonica Group]
gi|113534314|dbj|BAF06697.1| Os01g0844900 [Oryza sativa Japonica Group]
gi|218189362|gb|EEC71789.1| hypothetical protein OsI_04411 [Oryza sativa Indica Group]
gi|222619526|gb|EEE55658.1| hypothetical protein OsJ_04055 [Oryza sativa Japonica Group]
Length = 219
Score = 80.5 bits (197), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/64 (65%), Positives = 47/64 (73%), Gaps = 5/64 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK R+VW+ ELH +FV AV LG AVPK I+ LMNV GLTRENVASH LQK+RL
Sbjct: 105 KKARMVWTPELHHRFVEAVAHLGEKGAVPKAIVRLMNVDGLTRENVASH-----LQKYRL 159
Query: 276 YLKR 279
YLKR
Sbjct: 160 YLKR 163
>gi|357150179|ref|XP_003575369.1| PREDICTED: two-component response regulator-like PRR1-like
[Brachypodium distachyon]
Length = 521
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 6/125 (4%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D D R + ++LR C Y VT +++L D++L++V +P
Sbjct: 31 SKVRILLCDSDPDSSRDVLRLLRNCSYQVTCAKSPRQVINVLNCEGAEMDIILAEVDLPV 90
Query: 92 MDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
FK+L++I +L P+I VS V++ +R GA +YL+KP+R EL N+W H
Sbjct: 91 SKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 150
Query: 146 VVRKR 150
V R+R
Sbjct: 151 VWRRR 155
>gi|159477193|ref|XP_001696695.1| hypothetical protein CHLREDRAFT_130971 [Chlamydomonas reinhardtii]
gi|158275024|gb|EDP00803.1| predicted protein [Chlamydomonas reinhardtii]
Length = 69
Score = 80.1 bits (196), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/68 (57%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Query: 205 GELESDDPST--TKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 262
GE +DD +T K+PR+VW+ +LH++F SAV +LG DKAVPK I++ MN+ GLTRENVA
Sbjct: 2 GEEYADDGTTRAVKRPRLVWTPQLHRKFESAVIKLGEDKAVPKTIMQEMNIDGLTRENVA 61
Query: 263 SHLQEINL 270
SHLQ+ +
Sbjct: 62 SHLQKYRM 69
>gi|312281707|dbj|BAJ33719.1| unnamed protein product [Thellungiella halophila]
Length = 392
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 48/65 (73%), Gaps = 5/65 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK +V W+ +LH++FV AV QLG+DKAVP RILE+MNV LTR NVASH LQK+R
Sbjct: 143 KKTKVDWTPDLHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASH-----LQKYRS 197
Query: 276 YLKRL 280
+ K L
Sbjct: 198 HRKHL 202
>gi|218192572|gb|EEC74999.1| hypothetical protein OsI_11061 [Oryza sativa Indica Group]
Length = 780
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 19/135 (14%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYN-------------VTTCSQAAVALDILRERKGCF 80
LRVL+V++D + +++ +LR+C Y V A L + +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEDSRGFCASRFPSAVIPAENGLHAWQCLEDLQNHI 140
Query: 81 DVVLSDVHMPDMDGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPI 134
D+VL++V MP + G LL I + D+PVI ++ + V + + GA D+L+KPI
Sbjct: 141 DLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPI 200
Query: 135 REEELKNIWQHVVRK 149
R+ ELKN+WQHV R+
Sbjct: 201 RKNELKNLWQHVWRR 215
>gi|281308392|gb|ADA58344.1| pseudo-response regulator 1b [Brassica rapa]
Length = 509
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 70/123 (56%), Gaps = 6/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D+D L + +L +C Y VT+ A +D L D++L+++ +P
Sbjct: 19 VRILLCDNDSKSLGDVFTLLSQCSYQVTSVKSARQVIDALNAEGPDIDIILAEIDLPMAK 78
Query: 94 GFKLLEHIGLEMDL---PVITDGR---VSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G K+L +I + DL PVI R V V++ ++ GA DYL+KP+R EL N+W ++
Sbjct: 79 GMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTYMW 138
Query: 148 RKR 150
R+R
Sbjct: 139 RRR 141
>gi|225427316|ref|XP_002279150.1| PREDICTED: two-component response regulator-like APRR2 [Vitis
vinifera]
gi|297742160|emb|CBI33947.3| unnamed protein product [Vitis vinifera]
Length = 557
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 49/65 (75%), Gaps = 5/65 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK +V W+ ELH++FV AV QLG+D+A+P RILELM V GLTR NVASH LQK+R+
Sbjct: 315 KKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASH-----LQKYRM 369
Query: 276 YLKRL 280
+ + +
Sbjct: 370 HRRHI 374
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 69/135 (51%), Gaps = 6/135 (4%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
A D+ FP GLRVL++DDD T + L Y V+T AL + + F
Sbjct: 5 ANDLQEWKDFPKGLRVLLLDDDTTSAAEIRSKLEEMDYIVSTFCNENEALSAISSKPESF 64
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVITDGRV---SAVMRGIRHGACDYLIKPIREE 137
V + +V + FK LE DLP I + S +M+ I GA ++L KP+ E+
Sbjct: 65 HVAIVEVSTGNNGSFKFLE---TAKDLPTIMISSIHCLSTMMKCIALGAVEFLRKPLSED 121
Query: 138 ELKNIWQHVVRKRWN 152
+L+NIWQHVV K +N
Sbjct: 122 KLRNIWQHVVHKAFN 136
>gi|356495556|ref|XP_003516642.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 533
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 272
KK +V W+ ELH++FV AV QLGID+A+P RILE+M V GLTR NVASHLQ+ + K
Sbjct: 287 KKMKVDWTPELHKKFVKAVEQLGIDQAIPSRILEIMKVEGLTRHNVASHLQKYRIHK 343
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 72/136 (52%), Gaps = 7/136 (5%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
A D+ FP GLRVL+++ D + + + L YNV+T AL L F
Sbjct: 5 ANDLQEWKDFPKGLRVLLLEGDSSSAAEIREQLEAVDYNVSTFYDENEALSALSSSPEGF 64
Query: 81 DVVLSDVHMP-DMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIRE 136
V + +V + GFK LE+ DLP I D ++ +M+ I GA ++L KP+ E
Sbjct: 65 HVAIVEVSTSCSLGGFKFLEN---SKDLPTIMTSKDQCLNTMMKCIALGAVEFLSKPLSE 121
Query: 137 EELKNIWQHVVRKRWN 152
++LKNIWQHVV K +N
Sbjct: 122 DKLKNIWQHVVHKAFN 137
>gi|312283377|dbj|BAJ34554.1| unnamed protein product [Thellungiella halophila]
Length = 728
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+V++D I+ +LR C Y V + A +L + D+VL++V MP +
Sbjct: 84 IRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVLTEVVMPYLS 143
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I ++PVI + + V + + GA D+L+KPIR+ ELK +WQHV
Sbjct: 144 GISLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVW 203
Query: 148 RK 149
R+
Sbjct: 204 RR 205
>gi|307111029|gb|EFN59264.1| hypothetical protein CHLNCDRAFT_137569, partial [Chlorella
variabilis]
Length = 188
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCL-YNVTTCSQAAVALDILRERKGCFDVVLSDV 87
QFP GLRVL+VDD +C I Q+ L Y VT+ S A AL LR FDVVL++
Sbjct: 6 QFPKGLRVLLVDDMHSCSSIRTQLESPSLQYTVTSVSSATEALGYLRTGVAAFDVVLAES 65
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
+ D + + PV+ G VMR ++ GA D+L KP+ +LKNIWQ
Sbjct: 66 RIVAADESVGRCFVDAFEETPVVLMSACGTPDDVMRAVKLGAVDFLDKPLSHLKLKNIWQ 125
Query: 145 HVVRK 149
H VRK
Sbjct: 126 HSVRK 130
>gi|356540587|ref|XP_003538769.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 570
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 272
KK +V W+ ELH++FV AV QLGID+A+P RILE+M V GLTR NVASHLQ+ + K
Sbjct: 312 KKVKVDWTPELHKKFVKAVEQLGIDQAIPSRILEIMKVEGLTRHNVASHLQKYRIHK 368
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVL+++ D + + + L Y V+T AL L F V + +V
Sbjct: 14 FPKGLRVLLLEGDSSSAAEIREQLEAMDYKVSTFYDENEALSALSSSPKGFHVAIVEVST 73
Query: 90 P-DMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
+ GFK LE+ DLP I D ++ +M+ I GA ++L KP+ E++LKNIWQH
Sbjct: 74 SCSLGGFKFLENAK---DLPTIMTSKDQCLNTMMKCIALGAVEFLSKPLSEDKLKNIWQH 130
Query: 146 VVRKRWN 152
VV K +N
Sbjct: 131 VVHKAFN 137
>gi|18414032|ref|NP_568107.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
gi|52783235|sp|Q93WK5.1|APRR7_ARATH RecName: Full=Two-component response regulator-like APRR7; AltName:
Full=Pseudo-response regulator 7
gi|10281004|dbj|BAB13742.1| pseudo-response regulator 7 [Arabidopsis thaliana]
gi|14532638|gb|AAK64047.1| unknown protein [Arabidopsis thaliana]
gi|23296600|gb|AAN13129.1| unknown protein [Arabidopsis thaliana]
gi|332003137|gb|AED90520.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
Length = 727
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 68/123 (55%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+V++D I+ +LR C Y V S A +L + D+VL++V MP +
Sbjct: 78 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 137
Query: 94 GF----KLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G K+L H ++PVI + + V + + GA D+L+KPIR+ ELK +WQHV
Sbjct: 138 GIGLLCKILNHKS-RRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHV 196
Query: 147 VRK 149
R+
Sbjct: 197 WRR 199
>gi|303283994|ref|XP_003061288.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457639|gb|EEH54938.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 711
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L VL+V+DD + L ++ MLR C ++VTT + A+D L + D+VL+D+ MP++D
Sbjct: 53 LSVLLVEDDHSTLVFVKAMLRSCGHSVTTATNGQEAIDALLDPSSAIDLVLTDIMMPEVD 112
Query: 94 GFKLLEHIGLE----MDLPVITDGRVSA---VMRGIRHGACDYLIKPIREEELKNIWQHV 146
G +L++ + +P+I V + + GA DYL+KP+++ ++ ++ +H
Sbjct: 113 GLELMKIVQSSDKPFRSIPIIVMSTVDSDEFQAKCTEAGAQDYLVKPVKKAQMADLARHT 172
Query: 147 V--RKRWNENKEHE-NSGSLEETDHHKRG 172
V + ++ H NSG+ ET +RG
Sbjct: 173 VGGGAGMSVDRIHSNNSGASTETAQGRRG 201
>gi|365087760|ref|ZP_09327646.1| CheA signal transduction histidine kinase [Acidovorax sp. NO-1]
gi|363417383|gb|EHL24463.1| CheA signal transduction histidine kinase [Acidovorax sp. NO-1]
Length = 2027
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 83/154 (53%), Gaps = 12/154 (7%)
Query: 2 AALQRIVQSSGGSGYGSSRAA-DVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNV 60
A L ++++ G SG G + + +A P Q P VLVVDD IT R+ +++L+R Y V
Sbjct: 1872 AGLPPVLEADGSSGAGKAVVSPQLAGPSQVPL---VLVVDDSITVRRVTQRLLQREGYRV 1928
Query: 61 TTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHI---GLEMDLPVI-TDGRVS 116
+ AL+ L+E + VVLSD+ MP MDGF L +I G DLP+I R++
Sbjct: 1929 ALAADGLQALERLQEERPT--VVLSDIEMPRMDGFDLARNIRADGALRDLPIIMITSRIA 1986
Query: 117 AVMR--GIRHGACDYLIKPIREEELKNIWQHVVR 148
R + G YL KP +EEL ++ QH R
Sbjct: 1987 EKHREHAMELGVNHYLGKPYSDEELLSLIQHYAR 2020
>gi|281308388|gb|ADA58342.1| pseudo-response regulator 7a [Brassica rapa]
Length = 725
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 19/157 (12%)
Query: 11 SGGSGYGSSRAADVAVPDQFPAG-----------LRVLVVDDDITCLRILEQMLRRCLYN 59
+G +G GSS V + Q A +RVL+V++D I+ +LR C Y
Sbjct: 61 NGAAGQGSSPGLQVPLSQQTQATVCWERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYE 120
Query: 60 VTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF----KLLEHIGLEMDLPVI---TD 112
V + A +L + D+VL++V MP + G K+L H ++PVI +
Sbjct: 121 VVEVANGVQAWKVLEDLNNHIDIVLTEVVMPYLSGVGLLCKILNHKS-RRNIPVIMMSSH 179
Query: 113 GRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
+ + + + GA D+L+KPIR+ ELK +WQHV R+
Sbjct: 180 DSMGLIFKCLSKGAVDFLVKPIRKNELKILWQHVWRR 216
>gi|359491315|ref|XP_002281757.2| PREDICTED: two-component response regulator-like APRR1-like [Vitis
vinifera]
Length = 556
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 6/125 (4%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D+D + +L C Y VT+ A +D L D++L++V +P
Sbjct: 25 SNVRILLCDNDTKSSDEIFTLLCGCSYQVTSVRSARQVIDALNAEGHDIDIILAEVDLPM 84
Query: 92 MDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
G K+L++I + +L P+I VS V++ +R GA DYL+KP+R EL N+W H
Sbjct: 85 TKGMKMLKYIMRDKELRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 144
Query: 146 VVRKR 150
+ R+R
Sbjct: 145 MWRRR 149
>gi|224138036|ref|XP_002326502.1| pseudo response regulator [Populus trichocarpa]
gi|222833824|gb|EEE72301.1| pseudo response regulator [Populus trichocarpa]
Length = 448
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 50/65 (76%), Gaps = 4/65 (6%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK +V W+ ELH++FV AV +LG+D+A+P RILE+M V GLTR NVASHLQ QK+R+
Sbjct: 294 KKMKVDWTPELHRKFVQAVEKLGVDQAIPSRILEVMKVEGLTRHNVASHLQ----QKYRM 349
Query: 276 YLKRL 280
+ + +
Sbjct: 350 HRRHI 354
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 69/134 (51%), Gaps = 7/134 (5%)
Query: 23 DVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDV 82
D++ FP GLRVL++D+D ++ L Y V T AL + G F V
Sbjct: 7 DLSAWKDFPKGLRVLLLDEDSMSAAEIKSKLEAMDYIVYTFCNETEALSAISNEPGSFHV 66
Query: 83 VLSDVHMPDMD-GFKLLEHIGLEMDLPVITDGRV---SAVMRGIRHGACDYLIKPIREEE 138
+ +V M + FK LE DLP I + + +M+ I GA ++L KP+ E++
Sbjct: 67 AIVEVSMSNSSRSFKFLE---TSKDLPTIMTSSIDCLNTMMKCIALGAVEFLRKPLSEDK 123
Query: 139 LKNIWQHVVRKRWN 152
L+NIWQHVV K +N
Sbjct: 124 LRNIWQHVVHKAFN 137
>gi|241764781|ref|ZP_04762789.1| CheA signal transduction histidine kinase [Acidovorax delafieldii
2AN]
gi|241365711|gb|EER60407.1| CheA signal transduction histidine kinase [Acidovorax delafieldii
2AN]
Length = 2042
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 79/147 (53%), Gaps = 11/147 (7%)
Query: 8 VQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAA 67
V + G+G G A+ ++ P Q P VLVVDD IT R+ +++L+R Y V +
Sbjct: 1894 VLEAEGAGAGKPAASLLSGPSQVPL---VLVVDDSITVRRVTQRLLQREGYRVALAADGL 1950
Query: 68 VALDILRERKGCFDVVLSDVHMPDMDGFKLLEHI---GLEMDLPVI-TDGRVSAVMR--G 121
AL+ L+E + VVLSD+ MP MDGF L +I G DLP+I R++ R
Sbjct: 1951 QALERLQEERPT--VVLSDIEMPRMDGFDLARNIRADGALRDLPIIMITSRIAEKHREHA 2008
Query: 122 IRHGACDYLIKPIREEELKNIWQHVVR 148
+ G YL KP +EEL ++ QH R
Sbjct: 2009 MELGVNHYLGKPYSDEELLSLIQHYAR 2035
>gi|66809777|ref|XP_638612.1| cAMP phosphodiesterase [Dictyostelium discoideum AX4]
gi|3183160|sp|Q23917.1|PDE2_DICDI RecName: Full=3',5'-cyclic-nucleotide phosphodiesterase regA;
Short=PDEase regA; AltName: Full=Phosphodiesterase 2;
Short=DdPDE2; AltName: Full=Response regulator protein
A; AltName: Full=cAMP-specific 3',5'-cAMP
phosphodiesterase 2
gi|1405368|gb|AAB03508.1| RegA [Dictyostelium discoideum]
gi|3046777|emb|CAA06513.1| RegA [Dictyostelium discoideum]
gi|60467179|gb|EAL65213.1| cAMP phosphodiesterase [Dictyostelium discoideum AX4]
Length = 793
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 17 GSSRAADVAVPDQF-PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRE 75
S R +D + D++ P+ +R+LV DDD +IL +L++ YNVT +A + + +
Sbjct: 144 SSHRVSDFS--DEYSPSKVRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINK 201
Query: 76 RKGCFDVVLSDVHMPDMDGFKLLEHIG---LEMDLPVITDGRVSAVMR----GIRHGACD 128
+ +D+VL+DV MP + GF LL+ I + +PVI + + I+ G D
Sbjct: 202 GQQKYDLVLTDVMMPHITGFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKIGGQD 261
Query: 129 YLIKPIREEELKNIWQHVVRKRWNENKEHENSGSL 163
+L KPI +E LK V++ W KE E +L
Sbjct: 262 FLTKPIAKELLKKKIDTVLQSIWQRRKEEEYKATL 296
>gi|147794999|emb|CAN71929.1| hypothetical protein VITISV_001044 [Vitis vinifera]
Length = 563
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 5/65 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK +V W ELH++FV AV QLG+D+A+P RILELM V GLTR NVASH LQK+R+
Sbjct: 321 KKMKVDWXPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASH-----LQKYRM 375
Query: 276 YLKRL 280
+ + +
Sbjct: 376 HRRHI 380
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 12/141 (8%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
A D+ FP GLRVL++DDD T + L Y V+T AL + + F
Sbjct: 5 ANDLQEWKDFPKGLRVLLLDDDTTSAAEIRSKLEEMDYIVSTFCNENEALSAISSKPESF 64
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDLPVITDGR----VSAVM-----RGIRHGACDYLI 131
V + +V + FK LE DLP I G ++M + + GA ++L
Sbjct: 65 HVAIVEVSTGNNGSFKFLE---TAKDLPTIRAGMHFLLTISLMDVFDNQMFQLGAVEFLR 121
Query: 132 KPIREEELKNIWQHVVRKRWN 152
KP+ E++L+NIWQHVV K +N
Sbjct: 122 KPLSEDKLRNIWQHVVHKAFN 142
>gi|295913129|gb|ADG57826.1| transcription factor [Lycoris longituba]
Length = 207
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 8/89 (8%)
Query: 184 EGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAV 243
E E + + Q+KR S + ++ +K +V W+ +LH++FV AV QLGID+A+
Sbjct: 21 ENVESSVEYQKKRKS--------FPCSNKNSRRKMKVDWTPDLHRKFVQAVEQLGIDQAI 72
Query: 244 PKRILELMNVPGLTRENVASHLQEINLQK 272
P +ILELMNV GLTR N+ASHLQ+ + +
Sbjct: 73 PSKILELMNVEGLTRHNIASHLQKYRMNR 101
>gi|242092550|ref|XP_002436765.1| hypothetical protein SORBIDRAFT_10g008400 [Sorghum bicolor]
gi|241914988|gb|EER88132.1| hypothetical protein SORBIDRAFT_10g008400 [Sorghum bicolor]
Length = 466
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 67/126 (53%), Gaps = 14/126 (11%)
Query: 161 GSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTK---- 216
G E D H G + + EG GT ++ S + E ES S+ K
Sbjct: 130 GKGECNDDHAEGEEVVAGNGDSGEGGCGTVLGEKSPSSTTSQ---EAESRHKSSNKHSHG 186
Query: 217 --KPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFR 274
K +V W+ +LH++FV AV QLGIDKAVP RILE+M + LTR N+ASH LQK+R
Sbjct: 187 KKKAKVDWTPDLHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASH-----LQKYR 241
Query: 275 LYLKRL 280
+ K +
Sbjct: 242 SHRKHM 247
>gi|356565422|ref|XP_003550939.1| PREDICTED: two-component response regulator-like APRR2-like
[Glycine max]
Length = 576
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 47/63 (74%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK +V W+ ELH++FV AV QLGID+A+P RILELM V LTR NVASHLQ+ + K ++
Sbjct: 336 KKIKVDWTPELHKKFVKAVEQLGIDQAIPSRILELMKVESLTRHNVASHLQKYRMHKRQI 395
Query: 276 YLK 278
K
Sbjct: 396 LPK 398
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
A D+ FP GL+VL+ + D + L YNV+T AL ++ F
Sbjct: 28 ANDLQEWKDFPKGLKVLLHERDNISAAEIRAKLEAMDYNVSTFCDENDALSVISSGLESF 87
Query: 81 DVVLSDVHMPDMDG-FKLLEHIGLEMDLPVITDGR---VSAVMRGIRHGACDYLIKPIRE 136
+ + +V G FK LE+ DLP I ++ +M+ I GA ++L KP+ E
Sbjct: 88 HIAIVEVSSSSAQGGFKFLENAK---DLPTIMTSNNHCLNTMMKCIALGAVEFLSKPLSE 144
Query: 137 EELKNIWQHVVRKRWN 152
++L+NIWQHVV K +N
Sbjct: 145 DKLRNIWQHVVHKAFN 160
>gi|302143340|emb|CBI21901.3| unnamed protein product [Vitis vinifera]
Length = 371
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 8/86 (9%)
Query: 198 SAKEEDDGE---LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVP 254
S KE + G +S +P +K +V W+ ELH++FV AV QLG+DKAVP RILE+M +
Sbjct: 72 SPKEVEKGRKSSAQSKNPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGID 131
Query: 255 GLTRENVASHLQEINLQKFRLYLKRL 280
LTR N+ASH LQK+R + K L
Sbjct: 132 CLTRHNIASH-----LQKYRSHRKHL 152
>gi|345303921|ref|YP_004825823.1| two component, sigma54 specific, Fis family transcriptional
regulator [Rhodothermus marinus SG0.5JP17-172]
gi|345113154|gb|AEN73986.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodothermus marinus SG0.5JP17-172]
Length = 476
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 8/168 (4%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+L+VDD+ + E++ R +T+C A AL++L++ FD+V++D MPDMDG
Sbjct: 14 ILLVDDEHLLHTLFERLFTRHGMRLTSCYNALQALEVLKKEADAFDLVITDFKMPDMDGL 73
Query: 96 KLLEHIGLEM-DLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRW 151
+LL +I E DL VI V +R +++GA DY+ KP EEL Q + +R
Sbjct: 74 ELLAYIRQEHPDLQVIMITAHANVQHAVRAMQNGAIDYIPKPFSTEELVERVQAALARRR 133
Query: 152 NENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISA 199
+ +E N +R IEY T KA R++A
Sbjct: 134 KQQEEVNNRTPARLAK--RRRKPTIEYVGE--HPTIQRLKAMLPRVAA 177
>gi|297733942|emb|CBI15189.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 6/125 (4%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D+D + +L C Y VT+ A +D L D++L++V +P
Sbjct: 23 SNVRILLCDNDTKSSDEIFTLLCGCSYQVTSVRSARQVIDALNAEGHDIDIILAEVDLPM 82
Query: 92 MDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
G K+L++I + +L P+I VS V++ +R GA DYL+KP+R EL N+W H
Sbjct: 83 TKGMKMLKYIMRDKELRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTH 142
Query: 146 VVRKR 150
+ R+R
Sbjct: 143 MWRRR 147
>gi|451328694|gb|AGF37241.1| APRR2-like protein, partial [Capsicum annuum]
Length = 505
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 51/68 (75%), Gaps = 5/68 (7%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 272
S KK +V W+ ELH++FV AV QLGID+A+P RIL++M V GLTR N+ASH LQK
Sbjct: 312 SNKKKVKVDWTPELHKKFVQAVEQLGIDQAIPSRILDVMKVEGLTRHNIASH-----LQK 366
Query: 273 FRLYLKRL 280
+R++ +++
Sbjct: 367 YRMHRRQI 374
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 7/138 (5%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GL+VL++D+D + ++ L + Y V T + AL + + F V + +V
Sbjct: 14 FPKGLKVLLLDEDSSSAAEMKSRLEKMDYIVYTFCNESEALSAISSKSEGFHVAIVEVSA 73
Query: 90 PDMDGFKLLEHIGLEMDLPVITDGRV---SAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
D DG +L+ + +LP I + S +M+ I GA ++L KP+ +++LKNIWQHV
Sbjct: 74 GDNDG--VLQFLESAKNLPTIMTSNIHSLSTMMKCIALGAVEFLQKPLSDDKLKNIWQHV 131
Query: 147 VRKRWNENKEHENSGSLE 164
V K +N K + SG LE
Sbjct: 132 VHKAFNARK--DVSGPLE 147
>gi|381149243|gb|AFF60404.1| golden 2-like 1 transcription factor [Solanum lycopersicum]
gi|391868374|gb|AFM44934.1| golden1-like protein [Solanum lycopersicum]
Length = 464
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 7/102 (6%)
Query: 181 SVNEGTEGTFKAQRKRISAKEEDDGELESDDPST--TKKPRVVWSVELHQQFVSAVNQLG 238
S + E T + + ++ KE D G+ S + + +K +V W+ ELH++FV AV QLG
Sbjct: 138 STQKSEESTQQRNQNIVTPKESDKGKKSSKNHNLPGKRKVKVDWTPELHRRFVQAVEQLG 197
Query: 239 IDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRL 280
+DKAVP RILE+M + LTR N+ASH LQK+R + K L
Sbjct: 198 VDKAVPSRILEIMGIDCLTRHNIASH-----LQKYRSHRKHL 234
>gi|356565113|ref|XP_003550789.1| PREDICTED: two-component response regulator-like APRR1-like
[Glycine max]
Length = 565
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D+D + +L C Y V + A +D L D++L++V +P
Sbjct: 37 VRILLCDNDSKSSEEVFTLLLGCSYQVISVRSARQVIDALNAEGQYIDMILAEVDLPIKK 96
Query: 94 GFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G KLL++I + +L PVI VS V++ +R GA DYL+KP+R EL N+W H+
Sbjct: 97 GMKLLKYIARDKELCRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMW 156
Query: 148 RKR 150
R+R
Sbjct: 157 RRR 159
>gi|357124552|ref|XP_003563963.1| PREDICTED: probable transcription factor GLK1-like [Brachypodium
distachyon]
Length = 474
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK +V W+ ELH++FV AV QLGIDKAVP RILE+M + LTR N+ASH LQK+R
Sbjct: 188 KKAKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASH-----LQKYRS 242
Query: 276 YLKRL 280
+ K +
Sbjct: 243 HRKHM 247
>gi|381149253|gb|AFF60409.1| golden 2-like 2 transcription factor [Solanum phureja]
Length = 317
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 50/74 (67%)
Query: 211 DPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINL 270
+P +K +V W+ ELH++FV A+ +LG+DKAVP RILELM+ GLTR N+ASHLQ+
Sbjct: 86 NPQGKRKVKVDWTPELHRKFVKAIEKLGVDKAVPSRILELMSTHGLTRHNIASHLQKYRA 145
Query: 271 QKFRLYLKRLNGVS 284
+ L + VS
Sbjct: 146 HRKHLLAREAEAVS 159
>gi|281209703|gb|EFA83871.1| cAMP phosphodiesterase [Polysphondylium pallidum PN500]
Length = 665
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 77/153 (50%), Gaps = 14/153 (9%)
Query: 24 VAVPDQFPA-----GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKG 78
+ + DQ PA + +LVVDDDI +L ML++ +NVT + A D L K
Sbjct: 153 LVISDQLPAEYSPSKVHILVVDDDIVQRSLLNNMLKKFNFNVTLVTNGEEAWDTLLNGKV 212
Query: 79 CFDVVLSDVHMPDMDGFKLL----EHIGLEMDLPVITDGRVSAVMR----GIRHGACDYL 130
+D+VL+DV MP + GF LL EHI ++ +PVI + + I+ G D+L
Sbjct: 213 MYDLVLTDVMMPMVTGFDLLQRINEHIEIK-HIPVILMSGTAVDYKYANDTIKIGGQDFL 271
Query: 131 IKPIREEELKNIWQHVVRKRWNENKEHENSGSL 163
KPI +E LK V+ W + KE E L
Sbjct: 272 TKPIAKELLKKKIDTVLTSIWQKKKEAEYKSFL 304
>gi|281308396|gb|ADA58346.1| pseudo-response regulator 7b [Brassica rapa]
Length = 704
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+V++D I+ +LR C Y V + A +L + D+VL++V MP +
Sbjct: 74 IRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNNHIDIVLTEVVMPYLS 133
Query: 94 GF----KLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G K+L H ++PVI + + V + + GA D+L+KPIR+ ELK +WQHV
Sbjct: 134 GIGLLCKILNHKS-RRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHV 192
Query: 147 VRK 149
R+
Sbjct: 193 WRR 195
>gi|449448936|ref|XP_004142221.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 797
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + ++ +L C Y V + A +L + D+VL++V MP +
Sbjct: 89 LKVLLVENDDSTRHLVTALLCNCSYEVIAAANGLHAWKMLEDLTNHIDLVLTEVVMPCLS 148
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I ++PVI + + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 149 GIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 208
Query: 148 RK 149
R+
Sbjct: 209 RR 210
>gi|307105497|gb|EFN53746.1| hypothetical protein CHLNCDRAFT_136336 [Chlorella variabilis]
Length = 575
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 52/71 (73%), Gaps = 6/71 (8%)
Query: 210 DDPSTTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEI 268
DDP KK R++W+ LH++F+ AVN++G +DKA+PK +++ M V GLTRENVASH
Sbjct: 460 DDPCALKKARLIWTPALHRRFLEAVNRVGGVDKALPKAVMKEMGVSGLTRENVASH---- 515
Query: 269 NLQKFRLYLKR 279
LQK R+ LK+
Sbjct: 516 -LQKHRMRLKK 525
>gi|381149247|gb|AFF60406.1| golden 2-like 2 transcription factor [Capsicum annuum]
Length = 312
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Query: 211 DPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINL 270
+P KK +V W+ ELH++FV AV +LG+DKAVP RILELM GLTR N+ASH L
Sbjct: 88 NPEGKKKVKVDWTPELHRRFVKAVEKLGVDKAVPSRILELMATDGLTRHNIASH-----L 142
Query: 271 QKFRLYLKRL 280
QK+R + K L
Sbjct: 143 QKYRAHRKHL 152
>gi|225446455|ref|XP_002275230.1| PREDICTED: transcription activator GLK1-like [Vitis vinifera]
Length = 432
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 8/86 (9%)
Query: 198 SAKEEDDGE---LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVP 254
S KE + G +S +P +K +V W+ ELH++FV AV QLG+DKAVP RILE+M +
Sbjct: 133 SPKEVEKGRKSSAQSKNPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGID 192
Query: 255 GLTRENVASHLQEINLQKFRLYLKRL 280
LTR N+ASH LQK+R + K L
Sbjct: 193 CLTRHNIASH-----LQKYRSHRKHL 213
>gi|298249478|ref|ZP_06973282.1| response regulator receiver sensor signal transduction histidine
kinase [Ktedonobacter racemifer DSM 44963]
gi|297547482|gb|EFH81349.1| response regulator receiver sensor signal transduction histidine
kinase [Ktedonobacter racemifer DSM 44963]
Length = 432
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 21/177 (11%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYN--VTTCSQAAVALDILRERKGCFDVVLSDVHM 89
A R+LVVDDD L+ L MLR L N V T A +AL+++R + +DV++SD+ M
Sbjct: 6 ADARLLVVDDDPALLQALPHMLRLRLQNLHVDTAESAQLALELVRAQ--SYDVIVSDIKM 63
Query: 90 PDMDGFKLLEHI-GLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
P MDGF LL + L+ + PV+ G +R +R GA DY++KPI ++ +
Sbjct: 64 PGMDGFDLLTALQDLQSETPVLLITGHGEHDLAIRALRGGAYDYILKPIDRDDFAAAVRR 123
Query: 146 VV-------RKRWNENKEHENSGSLEETDHHKRGSDEIEYA----SSVNEGTEGTFK 191
+ R + + + + + SLE + + ++E++ A +SVNE E +
Sbjct: 124 AIDTAQLRQRVKHQQQELEQYAASLERQVYQR--TEELQQANVALASVNESREQMLR 178
>gi|302344196|ref|YP_003808725.1| response regulator receiver protein [Desulfarculus baarsii DSM
2075]
gi|301640809|gb|ADK86131.1| response regulator receiver protein [Desulfarculus baarsii DSM
2075]
Length = 139
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 10/137 (7%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAA---VALDILRERKGCFDVVLSDVHM 89
LRVL+VDD ++++ L+ +++ C + A ALD+LR+ + DVVLSD+HM
Sbjct: 2 ALRVLIVDDSAAMRAMVKKTLKAAGFSLDKCYEGANGLEALDVLRQNE--VDVVLSDLHM 59
Query: 90 PDMDGFKLLEHIGLEMDLP-----VITDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
P+MDG +LLE + E +P V T+GR + + + GA Y++KP + E L+ I +
Sbjct: 60 PEMDGLQLLEALQNEGRVPKCFILVTTEGRKEKLRQALAFGARGYVLKPFQPEGLRKILK 119
Query: 145 HVVRKRWNENKEHENSG 161
V + + EH G
Sbjct: 120 LFVGEPDEQELEHSPEG 136
>gi|121609961|ref|YP_997768.1| CheA signal transduction histidine kinase [Verminephrobacter eiseniae
EF01-2]
gi|121554601|gb|ABM58750.1| CheA signal transduction histidine kinases [Verminephrobacter
eiseniae EF01-2]
Length = 1983
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 79/147 (53%), Gaps = 12/147 (8%)
Query: 9 QSSGGSGYGSSRAAD-VAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAA 67
++ G +G G+ A +A P Q P VLVVDD IT R+ +++L+R Y V +
Sbjct: 1835 ETHGTAGTGNKVAPPRLAGPSQVPL---VLVVDDSITVRRVTQRLLQREGYRVALAADGL 1891
Query: 68 VALDILRERKGCFDVVLSDVHMPDMDGFKLLEHI---GLEMDLPVI-TDGRVSAVMR--G 121
AL+ L+E + VVLSD+ MP MDGF L +I G DLP+I R++ R
Sbjct: 1892 QALERLQEERPT--VVLSDIEMPRMDGFDLARNIRADGALRDLPIIMITSRIAEKHREHA 1949
Query: 122 IRHGACDYLIKPIREEELKNIWQHVVR 148
I G YL KP +EEL ++ QH R
Sbjct: 1950 IELGVNHYLGKPYSDEELLDLIQHYAR 1976
>gi|326498541|dbj|BAJ98698.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520928|dbj|BAJ92827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 459
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK +V W+ ELH++FV AV QLGIDKAVP RILE+M + LTR N+ASH LQK+R
Sbjct: 180 KKAKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGINSLTRHNIASH-----LQKYRS 234
Query: 276 YLKRL 280
+ K +
Sbjct: 235 HRKHM 239
>gi|297810093|ref|XP_002872930.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318767|gb|EFH49189.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 369
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 74/125 (59%), Gaps = 2/125 (1%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
++F + VL++D D TCL L +M+R+C Y V ++A I+ + D+VL+D
Sbjct: 8 ERFSKDICVLLLDSDATCLANLSEMIRKCGYRVVATTRAEDLPLIINNKDKKIDLVLADF 67
Query: 88 HMPDMDGFKLLEHIGLEMDLP-VITDGRVS-AVMRGIRHGACDYLIKPIREEELKNIWQH 145
+ +M+ ++LLE I L ++P V++D V A++ + GA L KP +E +LK +WQ
Sbjct: 68 RLIEMNKYELLEKIRLICEIPVVVSDAYVKDAIVECLCRGAKLCLEKPFKENDLKLLWQF 127
Query: 146 VVRKR 150
VR++
Sbjct: 128 TVRRQ 132
>gi|326522234|dbj|BAK07579.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 6/125 (4%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D D + + ++L C Y VT +++L D++L++V +P
Sbjct: 29 SKVRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPV 88
Query: 92 MDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
FK+L++IG +L P+I VS V++ +R GA +YL+KP+R EL N+W H
Sbjct: 89 SKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 148
Query: 146 VVRKR 150
V R+R
Sbjct: 149 VWRRR 153
>gi|364285649|gb|AEW48242.1| timing of cab expression 1 [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 6/125 (4%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D D + + ++L C Y VT +++L D++L++V +P
Sbjct: 29 SKVRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPV 88
Query: 92 MDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
FK+L++IG +L P+I VS V++ +R GA +YL+KP+R EL N+W H
Sbjct: 89 SKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 148
Query: 146 VVRKR 150
V R+R
Sbjct: 149 VWRRR 153
>gi|326531994|dbj|BAK01373.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|364285651|gb|AEW48243.1| timing of cab expression 1 [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 6/125 (4%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D D + + ++L C Y VT +++L D++L++V +P
Sbjct: 29 SKVRILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPV 88
Query: 92 MDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
FK+L++IG +L P+I VS V++ +R GA +YL+KP+R EL N+W H
Sbjct: 89 SKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 148
Query: 146 VVRKR 150
V R+R
Sbjct: 149 VWRRR 153
>gi|118722731|gb|ABL10089.1| golden 2-like protein [Triticum aestivum]
Length = 461
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK +V W+ ELH++FV AV QLGIDKAVP RILE+M + LTR N+ASH LQK+R
Sbjct: 180 KKAKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGINSLTRHNIASH-----LQKYRS 234
Query: 276 YLKRL 280
+ K +
Sbjct: 235 HRKHM 239
>gi|297832658|ref|XP_002884211.1| hypothetical protein ARALYDRAFT_480887 [Arabidopsis lyrata subsp.
lyrata]
gi|297330051|gb|EFH60470.1| hypothetical protein ARALYDRAFT_480887 [Arabidopsis lyrata subsp.
lyrata]
Length = 412
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
+K +V W+ ELH++FV AV QLG+DKAVP RILELM V LTR NVASH LQK+R
Sbjct: 151 RKVKVDWTPELHRRFVEAVEQLGVDKAVPSRILELMGVHCLTRHNVASH-----LQKYRS 205
Query: 276 YLKRL 280
+ K L
Sbjct: 206 HRKHL 210
>gi|115435568|ref|NP_001042542.1| Os01g0239000 [Oryza sativa Japonica Group]
gi|75321229|sp|Q5NAN5.1|GLK2_ORYSJ RecName: Full=Probable transcription factor GLK2; AltName:
Full=Golden2-like protein 2; Short=OsGLK2
gi|56784113|dbj|BAD81484.1| putative transcription factor OsGLK2 [Oryza sativa Japonica Group]
gi|113532073|dbj|BAF04456.1| Os01g0239000 [Oryza sativa Japonica Group]
gi|215768049|dbj|BAH00278.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 539
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 72/135 (53%), Gaps = 18/135 (13%)
Query: 156 EHENSGSL-EETDHHKRGSDEIEYASSVNEGTEGTFKA---------QRKRISAKEEDDG 205
+ E S SL EE D G DE+ A + + + G K+ +RK S+
Sbjct: 147 DEERSSSLPEEKDAKNGGGDEVLSAVTTEDSSAGAAKSCSPSAEGHSKRKPSSSSSSAAA 206
Query: 206 ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHL 265
S +K +V W+ ELH++FV AV QLGIDKAVP RILELM + LTR N+ASH
Sbjct: 207 GKNS---HGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASH- 262
Query: 266 QEINLQKFRLYLKRL 280
LQK+R + K L
Sbjct: 263 ----LQKYRSHRKHL 273
>gi|13940500|gb|AAK50394.1|AF318582_1 putative transcription factor OsGLK2 [Oryza sativa Indica Group]
Length = 430
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 68/131 (51%), Gaps = 14/131 (10%)
Query: 158 ENSGSL-EETDHHKRGSDEIEYASSVNEGTEGTFKA-------QRKRISAKEEDDGELES 209
E S SL EE D G DE+ A + + + G K+ KR
Sbjct: 40 ERSSSLPEEKDAKNGGGDEVLSAVTTEDSSAGAAKSCSPSAEGHSKR-KPSSSSSSAAAG 98
Query: 210 DDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEIN 269
+ +K +V W+ ELH++FV AV QLGIDKAVP RILELM + LTR N+ASH
Sbjct: 99 KNSHGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASH----- 153
Query: 270 LQKFRLYLKRL 280
LQK+R + K L
Sbjct: 154 LQKYRSHRKHL 164
>gi|18399397|ref|NP_565476.1| GBF's pro-rich region-interacting factor 1 [Arabidopsis thaliana]
gi|75337286|sp|Q9SIV3.2|GLK1_ARATH RecName: Full=Transcription activator GLK1; AltName: Full=GBF'S
PRO-RICH REGION-INTERACTING factor 1; AltName:
Full=Golden2-like protein 1; Short=AtGLK1
gi|13311003|gb|AAK16743.1| golden2-like transcription factor [Arabidopsis thaliana]
gi|13432088|gb|AAK20120.1| golden2-like protein 1 [Arabidopsis thaliana]
gi|15451040|gb|AAK96791.1| Unknown protein [Arabidopsis thaliana]
gi|17221599|dbj|BAB78466.1| GPRI1 [Arabidopsis thaliana]
gi|20148313|gb|AAM10047.1| unknown protein [Arabidopsis thaliana]
gi|20198041|gb|AAD21709.2| expressed protein [Arabidopsis thaliana]
gi|20198084|gb|AAM15392.1| expressed protein [Arabidopsis thaliana]
gi|330251936|gb|AEC07030.1| GBF's pro-rich region-interacting factor 1 [Arabidopsis thaliana]
Length = 420
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
+K +V W+ ELH++FV AV QLG+DKAVP RILELM V LTR NVASH LQK+R
Sbjct: 152 RKVKVDWTPELHRRFVEAVEQLGVDKAVPSRILELMGVHCLTRHNVASH-----LQKYRS 206
Query: 276 YLKRL 280
+ K L
Sbjct: 207 HRKHL 211
>gi|449490377|ref|XP_004158587.1| PREDICTED: transcription activator GLK1-like [Cucumis sativus]
Length = 453
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 14/105 (13%)
Query: 176 IEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVN 235
IE + V +G + + K + S + G+ +K +V W+ ELH++FV AV
Sbjct: 137 IEVSPLVKDGGDKSIKPLKASSSQSKNSQGK---------RKVKVDWTPELHRRFVQAVE 187
Query: 236 QLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRL 280
QLG+DKAVP RILELM + LTR NVASH LQK+R + K L
Sbjct: 188 QLGVDKAVPSRILELMGIECLTRHNVASH-----LQKYRSHRKHL 227
>gi|397911978|gb|AFO69282.1| pseudo-response regulator 1, partial [Hordeum vulgare]
Length = 491
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+ D D + + ++L C Y VT +++L D++L++V +P
Sbjct: 1 RILLCDSDPDSSQDVLRLLCNCSYQVTCAKSPRQVINVLNCEGAEIDIILAEVDLPVSKC 60
Query: 95 FKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 148
FK+L++IG +L P+I VS V++ +R GA +YL+KP+R EL N+W HV R
Sbjct: 61 FKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWR 120
Query: 149 KR 150
+R
Sbjct: 121 RR 122
>gi|219886905|gb|ACL53827.1| unknown [Zea mays]
Length = 476
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK +V W+ ELH++FV AV +LGIDKAVP RILE+M + LTR N+ASHLQ+ + +
Sbjct: 192 KKAKVDWTPELHRRFVQAVEELGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHM 251
Query: 276 YLKRLNGVSQQGGITNSFCAP 296
+ + + + AP
Sbjct: 252 LAREVEAATWTTHRRPMYAAP 272
>gi|162458514|ref|NP_001105018.1| G2-like1 [Zea mays]
gi|13940496|gb|AAK50392.1|AF318580_1 putative transcription factor ZmGLK1 [Zea mays]
gi|413952555|gb|AFW85204.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 475
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK +V W+ ELH++FV AV +LGIDKAVP RILE+M + LTR N+ASHLQ+ + +
Sbjct: 192 KKAKVDWTPELHRRFVQAVEELGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHM 251
Query: 276 YLKRLNGVSQQGGITNSFCAP 296
+ + + + AP
Sbjct: 252 LAREVEAATWTTHRRPMYAAP 272
>gi|413952556|gb|AFW85205.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 476
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK +V W+ ELH++FV AV +LGIDKAVP RILE+M + LTR N+ASHLQ+ + +
Sbjct: 192 KKAKVDWTPELHRRFVQAVEELGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHM 251
Query: 276 YLKRLNGVSQQGGITNSFCAP 296
+ + + + AP
Sbjct: 252 LAREVEAATWTTHRRPMYAAP 272
>gi|357474449|ref|XP_003607509.1| Two-component response regulator-like APRR2 [Medicago truncatula]
gi|355508564|gb|AES89706.1| Two-component response regulator-like APRR2 [Medicago truncatula]
Length = 442
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 5/69 (7%)
Query: 212 PSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
P +K +V W+ ELH++FV AV QLG+DKAVP RILE+M + LTR N+ASH LQ
Sbjct: 171 PQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDSLTRHNIASH-----LQ 225
Query: 272 KFRLYLKRL 280
K+R + K L
Sbjct: 226 KYRSHRKHL 234
>gi|309792010|ref|ZP_07686488.1| metal dependent phosphohydrolase [Oscillochloris trichoides DG-6]
gi|308226004|gb|EFO79754.1| metal dependent phosphohydrolase [Oscillochloris trichoides DG6]
Length = 511
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 80/135 (59%), Gaps = 11/135 (8%)
Query: 27 PDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSD 86
P Q P R+LVV+DD T +R Q L + Y+VTT AVA+++L+ + FD+VL+D
Sbjct: 10 PTQPP---RILVVEDD-TTIRTFCQRLLQMTYDVTTAENGAVAVNLLQSQ--SFDLVLTD 63
Query: 87 VHMPDMDGFKLLEHIGL---EMDLPVITD-GRVSAVMRGIRHGACDYLIKPIREEEL-KN 141
+ MP MDG +LL+HI E+D+ ++T V + ++ GA DYL KPI E+L +
Sbjct: 64 MQMPLMDGMQLLQHIRQNHPEIDVVMLTAFATVETARQALKMGALDYLSKPIEAEQLERT 123
Query: 142 IWQHVVRKRWNENKE 156
+ + +R + KE
Sbjct: 124 VRTSLELRRIRQEKE 138
>gi|159475341|ref|XP_001695777.1| hypothetical protein CHLREDRAFT_174408 [Chlamydomonas reinhardtii]
gi|158275337|gb|EDP01114.1| predicted protein [Chlamydomonas reinhardtii]
Length = 2212
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 81/183 (44%), Gaps = 9/183 (4%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL--RERKGCFDVVLSDVH 88
P+ LR+LVVD + Q+LR C Y VT A L L E FD+VL +
Sbjct: 1500 PSKLRILVVDSKAVSRQTTTQLLRECAYQVTAVKTAREGLQKLIEAEHGANFDLVLKEHE 1559
Query: 89 MPDMDGFKLLEHI----GLEMDLPVITDGR--VSAVMRGIRHGACDYLIKPIREEELKNI 142
P + +LL+ + GL V+T + VM + GA DYLIKP+R+ EL++I
Sbjct: 1560 PPSANACRLLKRMAKTEGLTRTPVVVTSSQDERETVMSCLSLGAIDYLIKPLRQNELRHI 1619
Query: 143 WQHVVRKRWNENKEHENSGSLE-ETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKE 201
W V R ++ +G H R SS N + + K+ +E
Sbjct: 1620 WTRVWWWRKSQGSGPHGAGPPPIAAAHGTRHYGAFRGPSSANRQYDQATSSDSKQTKCQE 1679
Query: 202 EDD 204
E++
Sbjct: 1680 EEE 1682
>gi|391868155|gb|AFM44933.1| golden2-like protein [Solanum lycopersicum]
gi|395629268|gb|AFN69447.1| golden 2-like 2 transcription factor [Solanum lycopersicum]
Length = 310
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 49/70 (70%), Gaps = 5/70 (7%)
Query: 211 DPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINL 270
+P KK ++ W+ ELH++FV A+ +LG+DKAVP RILELM GLTR N+ASH L
Sbjct: 79 NPQGKKKVKLDWTPELHRKFVKAIEKLGVDKAVPSRILELMATHGLTRHNIASH-----L 133
Query: 271 QKFRLYLKRL 280
QK+R + K L
Sbjct: 134 QKYRAHRKHL 143
>gi|242093734|ref|XP_002437357.1| hypothetical protein SORBIDRAFT_10g025490 [Sorghum bicolor]
gi|241915580|gb|EER88724.1| hypothetical protein SORBIDRAFT_10g025490 [Sorghum bicolor]
Length = 111
Score = 76.6 bits (187), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 6/88 (6%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLY-NVTTCSQAAVALDILRERKGC---FDVVL 84
+F AGLRVL VD+D L +L+++L+ C Y NVT + + ALD+LRERK FD+V+
Sbjct: 5 RFRAGLRVLAVDEDRVNLVVLKRVLKVCDYNNVTIVADVSTALDMLRERKDGDDQFDLVI 64
Query: 85 SDVHMPD--MDGFKLLEHIGLEMDLPVI 110
SD +P+ ++G K LE + +EMD+PVI
Sbjct: 65 SDFFIPNNGINGLKFLELVAVEMDIPVI 92
>gi|62632221|gb|AAX89130.1| golden2-like transcription factor [Zea mays]
Length = 469
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK +V W+ ELH++FV AV +LGIDKAVP RILE+M + LTR N+ASHLQ+ + +
Sbjct: 189 KKAKVDWTPELHRRFVQAVEELGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHM 248
Query: 276 YLKRLNGVSQQGGITNSFCAP 296
+ + + + AP
Sbjct: 249 LAREVEAATWTTHRRPMYAAP 269
>gi|302847255|ref|XP_002955162.1| hypothetical protein VOLCADRAFT_49095 [Volvox carteri f.
nagariensis]
gi|300259454|gb|EFJ43681.1| hypothetical protein VOLCADRAFT_49095 [Volvox carteri f.
nagariensis]
Length = 61
Score = 76.6 bits (187), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/55 (60%), Positives = 46/55 (83%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINL 270
K+PR+VW+ +LH++F SAV +LG +KAVPK I++ MN+ GLTRENVASHLQ+ +
Sbjct: 3 KRPRLVWTPQLHKKFESAVQKLGTEKAVPKNIMQEMNIDGLTRENVASHLQKYRM 57
>gi|302817481|ref|XP_002990416.1| pseudo response regulator [Selaginella moellendorffii]
gi|300141801|gb|EFJ08509.1| pseudo response regulator [Selaginella moellendorffii]
Length = 592
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 46/65 (70%), Gaps = 5/65 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK +V W+ ELHQ+FV AV QLG+DKA+P RILE M V LTR N+ASH LQK+R
Sbjct: 349 KKMKVDWTPELHQKFVQAVEQLGVDKAIPSRILEHMGVKCLTRHNIASH-----LQKYRS 403
Query: 276 YLKRL 280
+ K L
Sbjct: 404 HRKHL 408
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GL VLV D + +L+ C Y VT + AL + + K F + D
Sbjct: 12 FPKGLHVLVAIADGDDREEISGILQSCSYRVTAFTSEEDALAAIEKPKTPFHAAMVDATN 71
Query: 90 PDM-DGFKLLEHIGLEMDLPVITDGR-VSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
D+ DGFK+LE E+ + +I+ + +MR I GA D+L KP EE+LKNIWQHV
Sbjct: 72 RDIFDGFKVLE-AAKELAVIMISSTEDIETMMRAISLGAADFLQKPFSEEKLKNIWQHVA 130
Query: 148 RK 149
RK
Sbjct: 131 RK 132
>gi|392954660|ref|ZP_10320211.1| Fis family two component sigma54 specific transcriptional regulator
[Hydrocarboniphaga effusa AP103]
gi|391857317|gb|EIT67848.1| Fis family two component sigma54 specific transcriptional regulator
[Hydrocarboniphaga effusa AP103]
Length = 457
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 69/119 (57%), Gaps = 6/119 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LR+LVVDD+ R+LE ML R + + A ++LRE G FD+V+SD+ MP ++
Sbjct: 10 LRILVVDDEANMRRVLEIMLSRRGHKTVSAGDGQAAFELLRE--GGFDLVISDLRMPVVN 67
Query: 94 GFKLLEHI---GLEMDLPVIT-DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 148
G +LL + G+ + L +IT G + + + +R GACDYL++P E L V+R
Sbjct: 68 GIELLAKLREAGIGVPLIMITAQGSIESAVEAMRLGACDYLLRPFDVEALDLAINRVLR 126
>gi|384246638|gb|EIE20127.1| hypothetical protein COCSUDRAFT_57853 [Coccomyxa subellipsoidea
C-169]
Length = 402
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 68/131 (51%), Gaps = 30/131 (22%)
Query: 184 EGTEGTFKAQRKRISAKEEDDGELESDD--PSTTKKPRVVWSVELHQQFVSAVNQLGIDK 241
+G T + ++ K GE ++D+ K+PR+VW+ +LHQ FV AV QLG+
Sbjct: 204 QGMGATSSKRNQQEGPKATSTGEDDADENQARALKRPRLVWTAKLHQCFVQAVEQLGLKN 263
Query: 242 AVPKRILE-----------------------LMNVPGLTRENVASHLQEINLQKFRLYLK 278
AVPK I++ LM+V GLTRENVASH LQK+RL LK
Sbjct: 264 AVPKTIMQACFPTSATRLHPLSCPLQSVLAPLMHVDGLTRENVASH-----LQKYRLQLK 318
Query: 279 RLNGVSQQGGI 289
+ N + +G +
Sbjct: 319 KENKLDDEGNL 329
>gi|443302655|gb|AGC82269.1| cAMP phosphodiesterase [Acanthamoeba castellanii]
Length = 621
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 83/152 (54%), Gaps = 13/152 (8%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYN-VTTCSQAAVALDILRERKGCFDVVLSDVHM 89
P +++LVVDD+ T ++ ++L + Y V A++++ R F++VL D+HM
Sbjct: 9 PKEIKILVVDDEPTARIVVRKLLEKTGYTEVEVVESGRKAIELIENR--SFNLVLCDLHM 66
Query: 90 PDMDGFKLLEHIGLEM---DLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIW 143
PD+DG +++ + + D P++ ++ V + + GA DYL+KPI+ +KN+W
Sbjct: 67 PDIDGIGVVKAVRKKAHMDDSPIVMMSATEDLNIVYKCLSEGADDYLLKPIQANAVKNLW 126
Query: 144 QHVVRKRWNENKEHENSGSLEETDHHKRGSDE 175
Q+V RKR KE E + L + + DE
Sbjct: 127 QNVWRKR----KEKETANMLSHERNKSKAMDE 154
>gi|356543865|ref|XP_003540379.1| PREDICTED: transcription activator GLK1-like [Glycine max]
Length = 441
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 11/89 (12%)
Query: 198 SAKEEDDGELESD------DPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELM 251
S KE + G S+ +P +K +V W+ ELH++FV AV QLG+DKAVP RILE+M
Sbjct: 145 SRKESEKGRKSSNHAARNNNPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIM 204
Query: 252 NVPGLTRENVASHLQEINLQKFRLYLKRL 280
+ LTR N+ASH LQK+R + K L
Sbjct: 205 GIDCLTRHNIASH-----LQKYRSHRKHL 228
>gi|108864017|gb|ABG22374.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 620
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Query: 69 ALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLE---MDLPVI---TDGRVSAVMRGI 122
A ++RER FD+VL++V MP + G +LL I ++PVI + + V+R +
Sbjct: 3 AWGVMRERAYAFDLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCM 62
Query: 123 RHGACDYLIKPIREEELKNIWQHVVRK 149
+ GA D+L+KP+R+ EL+N+WQHV R+
Sbjct: 63 QKGAVDFLVKPVRKNELRNLWQHVWRR 89
>gi|302754156|ref|XP_002960502.1| hypothetical protein SELMODRAFT_402806 [Selaginella moellendorffii]
gi|300171441|gb|EFJ38041.1| hypothetical protein SELMODRAFT_402806 [Selaginella moellendorffii]
Length = 271
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 64/120 (53%), Gaps = 17/120 (14%)
Query: 214 TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKF 273
TTKK +V W+ +LH+ FV V +LG++KA+P RILE+M V LTR NVASH LQK+
Sbjct: 112 TTKKTKVDWNPDLHRLFVQTVEELGLEKAIPSRILEIMGVESLTRHNVASH-----LQKY 166
Query: 274 RLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQTLAALHAELL 333
R KR S+Q C+ +E L + D + S IP LA LL
Sbjct: 167 RAQRKRKRAESKQK------CSSLE------PLNKRDCLHIQPSPSIPSTCLAMYGDSLL 214
>gi|115484281|ref|NP_001065802.1| Os11g0157600 [Oryza sativa Japonica Group]
gi|108864015|gb|ABG22372.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
gi|108864016|gb|ABG22373.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
gi|113644506|dbj|BAF27647.1| Os11g0157600 [Oryza sativa Japonica Group]
gi|125576282|gb|EAZ17504.1| hypothetical protein OsJ_33036 [Oryza sativa Japonica Group]
gi|213959178|gb|ACJ54923.1| CCT motif family protein [Oryza sativa Japonica Group]
gi|218185285|gb|EEC67712.1| hypothetical protein OsI_35190 [Oryza sativa Indica Group]
Length = 623
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Query: 69 ALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLE---MDLPVI---TDGRVSAVMRGI 122
A ++RER FD+VL++V MP + G +LL I ++PVI + + V+R +
Sbjct: 3 AWGVMRERAYAFDLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCM 62
Query: 123 RHGACDYLIKPIREEELKNIWQHVVRK 149
+ GA D+L+KP+R+ EL+N+WQHV R+
Sbjct: 63 QKGAVDFLVKPVRKNELRNLWQHVWRR 89
>gi|268316364|ref|YP_003290083.1| Fis family two component sigma-54 specific transcriptional
regulator [Rhodothermus marinus DSM 4252]
gi|262333898|gb|ACY47695.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodothermus marinus DSM 4252]
Length = 472
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 7/147 (4%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+L+VDD+ + E++ R +T+C A A+++L++ FD+V++D MPDMDG
Sbjct: 11 ILLVDDEHLLHTLFERLFTRHGLRLTSCYNALQAMEVLKKEADAFDLVITDFKMPDMDGL 70
Query: 96 KLLEHIGLEM-DLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRW 151
+LL +I E DL VI V +R +++GA DY+ KP EEL Q + +R
Sbjct: 71 ELLAYIRQEHPDLQVIMITAHANVQHAVRAMQNGAIDYIPKPFSTEELVERVQAALARR- 129
Query: 152 NENKEHENSGSLEETDHHKRGSDEIEY 178
++ E +R IEY
Sbjct: 130 --REQQEARAKQPARTSQRRARPTIEY 154
>gi|319657093|gb|ADV58925.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657097|gb|ADV58927.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657101|gb|ADV58929.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
Length = 788
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 30 FPAGL-RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
P G +VL+V+ D + I+ +LR+C Y V A IL + D+VL++V
Sbjct: 91 LPVGSPKVLLVESDDSTRHIVSALLRKCSYEVVGVPNGIEAWKILEDLSNQIDLVLTEVV 150
Query: 89 MPDMDGFKLLEHIGLE---MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNI 142
+ G LL I + PVI + + V++ + GA D+L+KPIR+ ELKN+
Sbjct: 151 TSGLSGIGLLSKIMSHKSCQNTPVIMMSSHDSMGLVLKCLSKGAVDFLVKPIRKNELKNL 210
Query: 143 WQHVVRK 149
WQHV R+
Sbjct: 211 WQHVWRR 217
>gi|297800266|ref|XP_002868017.1| pseudo-response regulator 2 [Arabidopsis lyrata subsp. lyrata]
gi|297313853|gb|EFH44276.1| pseudo-response regulator 2 [Arabidopsis lyrata subsp. lyrata]
Length = 533
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 5/66 (7%)
Query: 215 TKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFR 274
T + +V W+ ELH++FV AV QLG+D+A+P RILELM V LTR NVASH LQKFR
Sbjct: 292 TSRKKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVASH-----LQKFR 346
Query: 275 LYLKRL 280
+ K +
Sbjct: 347 QHRKNI 352
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 12/143 (8%)
Query: 21 AADVAVPDQFPAGLRVLVV------DDDITCLRILEQMLRRCLYNVTTCSQAAVALDILR 74
A D++ + FP GL+VL++ D D + L Y VTT + AL +
Sbjct: 5 ANDLSKWENFPKGLKVLLLLHGGDSDRDGSSAAETRSKLESMDYIVTTFTDETEALSAVV 64
Query: 75 ERKGCFDVVLSDVHM-PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYL 130
+ + F V + +V+ + + FK LE G + LP I TD ++ M+ I GA ++L
Sbjct: 65 KNRESFHVAIVEVNTRAENESFKFLE--GAKDVLPTIMISTDHCITTTMKCIALGAVEFL 122
Query: 131 IKPIREEELKNIWQHVVRKRWNE 153
KP+ E+LKNIWQHVV K +N+
Sbjct: 123 QKPLSPEKLKNIWQHVVHKAFND 145
>gi|18415009|ref|NP_567548.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|30684266|ref|NP_849403.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|145361326|ref|NP_849404.2| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|334186660|ref|NP_001190759.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|52783226|sp|Q6LA43.2|APRR2_ARATH RecName: Full=Two-component response regulator-like APRR2; AltName:
Full=Pseudo-response regulator 2; AltName: Full=TOC2
protein
gi|14326543|gb|AAK60316.1|AF385725_1 AT4g18020/T6K21_200 [Arabidopsis thaliana]
gi|23506085|gb|AAN28902.1| At4g18020/T6K21_200 [Arabidopsis thaliana]
gi|332658580|gb|AEE83980.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|332658581|gb|AEE83981.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|332658582|gb|AEE83982.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|332658585|gb|AEE83985.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
Length = 535
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 5/66 (7%)
Query: 215 TKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFR 274
T + +V W+ ELH++FV AV QLG+D+A+P RILELM V LTR NVASH LQKFR
Sbjct: 294 TSRKKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVASH-----LQKFR 348
Query: 275 LYLKRL 280
+ K +
Sbjct: 349 QHRKNI 354
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 12/143 (8%)
Query: 21 AADVAVPDQFPAGLRVLVV------DDDITCLRILEQMLRRCLYNVTTCSQAAVALDILR 74
A D++ + FP GL+VL++ D D + L Y VTT + AL +
Sbjct: 5 ANDLSKWENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVV 64
Query: 75 ERKGCFDVVLSDVHM-PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYL 130
+ F + + +V+M + + FK LE + LP I TD ++ M+ I GA ++L
Sbjct: 65 KNPESFHIAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCITTTMKCIALGAVEFL 122
Query: 131 IKPIREEELKNIWQHVVRKRWNE 153
KP+ E+LKNIWQHVV K +N+
Sbjct: 123 QKPLSPEKLKNIWQHVVHKAFND 145
>gi|224095575|ref|XP_002310413.1| predicted protein [Populus trichocarpa]
gi|222853316|gb|EEE90863.1| predicted protein [Populus trichocarpa]
Length = 328
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
+K +V W+ ELH++FV AV QLG+DKAVP RILELM + LTR N+ASH LQK+R
Sbjct: 157 RKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILELMGIDCLTRHNIASH-----LQKYRS 211
Query: 276 YLKRL 280
+ K L
Sbjct: 212 HRKHL 216
>gi|334184330|ref|NP_001189562.1| GBF's pro-rich region-interacting factor 1 [Arabidopsis thaliana]
gi|330251937|gb|AEC07031.1| GBF's pro-rich region-interacting factor 1 [Arabidopsis thaliana]
Length = 436
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 45/62 (72%), Gaps = 5/62 (8%)
Query: 219 RVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLK 278
+V W+ ELH++FV AV QLG+DKAVP RILELM V LTR NVASH LQK+R + K
Sbjct: 171 KVDWTPELHRRFVEAVEQLGVDKAVPSRILELMGVHCLTRHNVASH-----LQKYRSHRK 225
Query: 279 RL 280
L
Sbjct: 226 HL 227
>gi|7413556|emb|CAB86035.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 8/119 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+V++D I+ +LR C Y V S A +L + D+VL++V MP +
Sbjct: 78 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 137
Query: 94 GF----KLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
G K+L H ++PVI + + V + + GA D+L+KPIR+ ELK +WQH
Sbjct: 138 GIGLLCKILNHKS-RRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQH 195
>gi|330831457|ref|YP_004394409.1| two-component system response regulator [Aeromonas veronii B565]
gi|406675314|ref|ZP_11082503.1| hypothetical protein HMPREF1170_00711 [Aeromonas veronii AMC35]
gi|423203229|ref|ZP_17189807.1| hypothetical protein HMPREF1167_03390 [Aeromonas veronii AER39]
gi|423211893|ref|ZP_17198426.1| hypothetical protein HMPREF1169_03944 [Aeromonas veronii AER397]
gi|328806593|gb|AEB51792.1| Two-component system response regulator [Aeromonas veronii B565]
gi|404612694|gb|EKB09752.1| hypothetical protein HMPREF1169_03944 [Aeromonas veronii AER397]
gi|404613458|gb|EKB10480.1| hypothetical protein HMPREF1167_03390 [Aeromonas veronii AER39]
gi|404627646|gb|EKB24446.1| hypothetical protein HMPREF1170_00711 [Aeromonas veronii AMC35]
Length = 426
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+VDDD++ L+++ LR Y V T A ALD LR+++ D+VLSD+ M MDG
Sbjct: 3 RILLVDDDVSLLKLMSMRLRSQGYEVDTADSAEGALDRLRQQRA--DLVLSDLRMAGMDG 60
Query: 95 FKLLEHIGLE-MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
L E I + + LPVI G + ++ R G +L KPI ++EL +H +
Sbjct: 61 LALFERIQAQWLGLPVIIMTAHGTIPDAIQATRSGVFSFLTKPINKDELFATIEHAL 117
>gi|297840627|ref|XP_002888195.1| hypothetical protein ARALYDRAFT_893617 [Arabidopsis lyrata subsp.
lyrata]
gi|297334036|gb|EFH64454.1| hypothetical protein ARALYDRAFT_893617 [Arabidopsis lyrata subsp.
lyrata]
Length = 117
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 55/84 (65%), Gaps = 6/84 (7%)
Query: 203 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENV 261
+D E+ + + R VWS ELHQ+F++A++QLG DKA+PK+IL MNV GLTR NV
Sbjct: 8 EDPEIVQESRTRKNHGRFVWSHELHQKFLNAIDQLGGNDKAIPKKILADMNVEGLTRLNV 67
Query: 262 ASHLQEINLQKFRLYLKRLNGVSQ 285
A+H LQK+RL L+R Q
Sbjct: 68 ATH-----LQKYRLTLERTTEAQQ 86
>gi|363807950|ref|NP_001241943.1| uncharacterized protein LOC100799248 [Glycine max]
gi|255638900|gb|ACU19752.1| unknown [Glycine max]
Length = 426
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 48/69 (69%), Gaps = 5/69 (7%)
Query: 212 PSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
P +K +V W+ ELH++FV AV QLG+DKAVP RILE+M + LTR N+ASH LQ
Sbjct: 170 PQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASH-----LQ 224
Query: 272 KFRLYLKRL 280
K+R + K L
Sbjct: 225 KYRSHRKHL 233
>gi|449442040|ref|XP_004138790.1| PREDICTED: transcription activator GLK1-like [Cucumis sativus]
Length = 455
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
+K +V W+ ELH++FV AV QLG+DKAVP RILELM + LTR NVASH LQK+R
Sbjct: 170 RKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILELMGIECLTRHNVASH-----LQKYRS 224
Query: 276 YLKRL 280
+ K L
Sbjct: 225 HRKHL 229
>gi|224285460|gb|ACN40452.1| unknown [Picea sitchensis]
Length = 400
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 88/184 (47%), Gaps = 27/184 (14%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
+K +V W+ +LH++FV AV QLG++KAVP RILELM V LTR N+ASH LQK+R
Sbjct: 124 RKIKVDWTQDLHRRFVQAVEQLGVEKAVPSRILELMGVNCLTRHNIASH-----LQKYRS 178
Query: 276 YLKRLNGVSQQGGITNS---FCAPIETNVK--LGSLGRFDIQALAASGQIPPQTLAALHA 330
+ K L + N A T + +G G IQ + G PP A+ HA
Sbjct: 179 HRKHLLAREAEAATWNHRRQLYATTGTRARPWIGQNGNPLIQPRPSIG-FPPMAPAS-HA 236
Query: 331 -----ELLGRPTGNLVTAVDQPALL---QATLQGPKCIPADHGVAFGQQLVKCQSNVPEN 382
+ G PT VD ++ + ++ P P+ G F QQ C + N
Sbjct: 237 PFRPLHVWGHPT------VDHSSVHMWQKHSMPAPAPWPSPDGY-FWQQTTACTNPWDHN 289
Query: 383 LPQS 386
P S
Sbjct: 290 APAS 293
>gi|220030924|gb|ACL78627.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030974|gb|ACL78652.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLSRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|145333342|ref|NP_001078405.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|238480814|ref|NP_001154250.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|7576356|dbj|BAA94548.1| pseudo-response regulator 2 [Arabidopsis thaliana]
gi|332658583|gb|AEE83983.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
gi|332658584|gb|AEE83984.1| two-component response regulator-like APRR2 [Arabidopsis thaliana]
Length = 487
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 5/66 (7%)
Query: 215 TKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFR 274
T + +V W+ ELH++FV AV QLG+D+A+P RILELM V LTR NVASH LQKFR
Sbjct: 294 TSRKKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVASH-----LQKFR 348
Query: 275 LYLKRL 280
+ K +
Sbjct: 349 QHRKNI 354
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 12/143 (8%)
Query: 21 AADVAVPDQFPAGLRVLVV------DDDITCLRILEQMLRRCLYNVTTCSQAAVALDILR 74
A D++ + FP GL+VL++ D D + L Y VTT + AL +
Sbjct: 5 ANDLSKWENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVV 64
Query: 75 ERKGCFDVVLSDVHM-PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYL 130
+ F + + +V+M + + FK LE + LP I TD ++ M+ I GA ++L
Sbjct: 65 KNPESFHIAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCITTTMKCIALGAVEFL 122
Query: 131 IKPIREEELKNIWQHVVRKRWNE 153
KP+ E+LKNIWQHVV K +N+
Sbjct: 123 QKPLSPEKLKNIWQHVVHKAFND 145
>gi|149919982|ref|ZP_01908457.1| two component, sigma54 specific, transcriptional regulator, Fis
family protein [Plesiocystis pacifica SIR-1]
gi|149819255|gb|EDM78689.1| two component, sigma54 specific, transcriptional regulator, Fis
family protein [Plesiocystis pacifica SIR-1]
Length = 513
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRER-KGCFDVVLSDVHMPDMD 93
RVLVVDD+ ++L +L + Y V T A AL ++ +G FDVV+SD+ MP+MD
Sbjct: 7 RVLVVDDEPNLRKVLGALLMQLGYEVLTEPDGASALARVKSAPRGTFDVVISDLRMPNMD 66
Query: 94 GFKLLEHIGLE-MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
G LLE + E LPVI G V ++ ++ GA D+L KP +++ ++ V+
Sbjct: 67 GMALLEALTAEDSSLPVIILTAHGTVDTAVQAVKKGAFDFLEKPFERDQIDHLVSKAVKT 126
Query: 150 R 150
R
Sbjct: 127 R 127
>gi|224109002|ref|XP_002315046.1| predicted protein [Populus trichocarpa]
gi|222864086|gb|EEF01217.1| predicted protein [Populus trichocarpa]
Length = 338
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELHQ+FV AVNQLG D+A PK ++ +M +PGLT ++ SHLQ I +
Sbjct: 13 STDGKPRLKWTQELHQRFVEAVNQLGGADRATPKSLMRVMEIPGLTLYHLKSHLQAILFR 72
Query: 272 KFRLYLKRLNGVSQQGGIT 290
R K G SQQ I+
Sbjct: 73 MIRSIYKYRLGKSQQSLIS 91
>gi|456359240|dbj|BAM93449.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359248|dbj|BAM93453.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 147 VRK 149
R+
Sbjct: 156 WRR 158
>gi|381151411|ref|ZP_09863280.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Methylomicrobium album BG8]
gi|380883383|gb|EIC29260.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Methylomicrobium album BG8]
Length = 450
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 65/109 (59%), Gaps = 6/109 (5%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+LV+DDD + L +MLR+ Y+VT C+Q AL+ + K FD+V+SDV MP M G
Sbjct: 7 RLLVIDDDPGVVDYLLEMLRQQGYSVTGCTQTGQALEAI--EKEPFDLVVSDVVMPGMRG 64
Query: 95 FKLLEHIGL----EMDLPVITDGRVSAVMRGIRHGACDYLIKPIREEEL 139
+L+ I ++ L + G + ++ +R GACD+L KP R EEL
Sbjct: 65 LELMAAIHRKRPEQLVLLITAFGSIDLAIQSMRAGACDFLTKPFRIEEL 113
>gi|125569682|gb|EAZ11197.1| hypothetical protein OsJ_01047 [Oryza sativa Japonica Group]
Length = 386
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 66/121 (54%), Gaps = 13/121 (10%)
Query: 156 EHENSGSL-EETDHHKRGSDEIEYASSVNEGTEGTFKA---------QRKRISAKEEDDG 205
+ E S SL EE D G DE+ A + + + G K+ +RK S+
Sbjct: 147 DEERSSSLPEEKDAKNGGGDEVLSAVTTEDSSAGAAKSCSPSAEGHSKRKPSSSSSSAAA 206
Query: 206 ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHL 265
S +K +V W+ ELH++FV AV QLGIDKAVP RILELM + LTR N+ASHL
Sbjct: 207 GKNS---HGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHL 263
Query: 266 Q 266
Q
Sbjct: 264 Q 264
>gi|125525102|gb|EAY73216.1| hypothetical protein OsI_01087 [Oryza sativa Indica Group]
Length = 384
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 66/121 (54%), Gaps = 13/121 (10%)
Query: 156 EHENSGSL-EETDHHKRGSDEIEYASSVNEGTEGTFKA---------QRKRISAKEEDDG 205
+ E S SL EE D G DE+ A + + + G K+ +RK S+
Sbjct: 145 DEERSSSLPEEKDAKNGGGDEVLSAVTTEDSSAGAAKSCSPSAEGHSKRKPSSSSSSAAA 204
Query: 206 ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHL 265
S +K +V W+ ELH++FV AV QLGIDKAVP RILELM + LTR N+ASHL
Sbjct: 205 GKNS---HGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHL 261
Query: 266 Q 266
Q
Sbjct: 262 Q 262
>gi|456359228|dbj|BAM93443.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359236|dbj|BAM93447.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359238|dbj|BAM93448.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359242|dbj|BAM93450.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359260|dbj|BAM93459.1| pseudo-response regulator [Triticum dicoccoides]
Length = 662
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 147 VRK 149
R+
Sbjct: 156 WRR 158
>gi|456359230|dbj|BAM93444.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359232|dbj|BAM93445.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359234|dbj|BAM93446.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 147 VRK 149
R+
Sbjct: 156 WRR 158
>gi|159466928|ref|XP_001691650.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278996|gb|EDP04758.1| predicted protein [Chlamydomonas reinhardtii]
Length = 55
Score = 75.1 bits (183), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/54 (57%), Positives = 45/54 (83%)
Query: 214 TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQE 267
++K+PR++W+ ELH +F+ V+QLG++ AVPK IL +M V G+TRENVASHLQ+
Sbjct: 1 SSKRPRMLWTHELHLRFMHVVSQLGVETAVPKTILSMMGVDGMTRENVASHLQK 54
>gi|118638651|gb|ABL09481.1| pseudo-response regulator [Aegilops tauschii]
Length = 661
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 91
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 92 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 151
Query: 147 VRK 149
R+
Sbjct: 152 WRR 154
>gi|118638642|gb|ABL09477.1| pseudo-response regulator [Triticum aestivum]
Length = 660
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 91
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 92 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 151
Query: 147 VRK 149
R+
Sbjct: 152 WRR 154
>gi|118638644|gb|ABL09478.1| pseudo-response regulator [Triticum aestivum]
gi|118638646|gb|ABL09479.1| pseudo-response regulator [Triticum aestivum]
gi|118638648|gb|ABL09480.1| pseudo-response regulator [Triticum aestivum]
gi|395759125|dbj|BAM31259.1| pseudo-response regulator [Triticum aestivum]
Length = 660
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 91
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 92 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 151
Query: 147 VRK 149
R+
Sbjct: 152 WRR 154
>gi|118638624|gb|ABL09468.1| pseudo-response regulator [Triticum aestivum]
gi|383215296|gb|AFG73161.1| pseudo-response regulator [Triticum aestivum]
gi|383215297|gb|AFG73162.1| pseudo-response regulator [Triticum aestivum]
gi|383215298|gb|AFG73163.1| pseudo-response regulator [Triticum aestivum]
Length = 664
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHNSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 147 VRK 149
R+
Sbjct: 155 WRR 157
>gi|328868868|gb|EGG17246.1| cAMP-specific phosphodiesterase [Dictyostelium fasciculatum]
Length = 842
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 7/117 (5%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P+ + +LVVDDDIT ++L+ +L + YNVT S A A ++L FD+VL+DV MP
Sbjct: 142 PSSIHILVVDDDITQRKVLQNLLSKVFYNVTLVSSAEEAWNMLIYGTTKFDLVLTDVMMP 201
Query: 91 DMDGFKLLEHIGLE---MDLPVI----TDGRVSAVMRGIRHGACDYLIKPIREEELK 140
+ GF LL+ I ++PVI T I+ G D++ KPI +E LK
Sbjct: 202 QVTGFDLLQRINEHPEIKNIPVILMSGTALDCKYANDTIKIGGQDFVTKPIAKELLK 258
>gi|220030726|gb|ACL78528.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|379025744|dbj|BAL63649.1| pseudo-response regulator [Triticum durum]
gi|379025748|dbj|BAL63651.1| pseudo-response regulator [Triticum durum]
gi|379025762|dbj|BAL63658.1| pseudo-response regulator [Triticum durum]
gi|379025764|dbj|BAL63659.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 147 VRK 149
R+
Sbjct: 158 WRR 160
>gi|145297354|ref|YP_001140195.1| two-component system response regulator [Aeromonas salmonicida
subsp. salmonicida A449]
gi|418362107|ref|ZP_12962751.1| two-component system response regulator [Aeromonas salmonicida
subsp. salmonicida 01-B526]
gi|142850126|gb|ABO88447.1| two-component system response regulator [Aeromonas salmonicida
subsp. salmonicida A449]
gi|356686742|gb|EHI51335.1| two-component system response regulator [Aeromonas salmonicida
subsp. salmonicida 01-B526]
Length = 426
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+VDDD++ L+++ LR Y V T A ALD LR+++ D+VLSD+ M MDG
Sbjct: 3 RILLVDDDVSLLKLMSMRLRSQGYEVDTADSAEGALDRLRQQRA--DLVLSDLRMAGMDG 60
Query: 95 FKLLEHIGLE-MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
L E I + + LPVI G + ++ R G +L KPI ++EL +H +
Sbjct: 61 LALFERIQSQWLGLPVIIMTAHGTIPDAIQATRSGVFSFLTKPIDKDELFATIEHAL 117
>gi|220030962|gb|ACL78646.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|379025736|dbj|BAL63645.1| pseudo-response regulator [Triticum durum]
gi|379025738|dbj|BAL63646.1| pseudo-response regulator [Triticum durum]
gi|379025740|dbj|BAL63647.1| pseudo-response regulator [Triticum durum]
gi|379025746|dbj|BAL63650.1| pseudo-response regulator [Triticum durum]
gi|379025750|dbj|BAL63652.1| pseudo-response regulator [Triticum durum]
gi|379025752|dbj|BAL63653.1| pseudo-response regulator [Triticum durum]
gi|379025754|dbj|BAL63654.1| pseudo-response regulator [Triticum durum]
gi|379025756|dbj|BAL63655.1| pseudo-response regulator [Triticum durum]
gi|379025758|dbj|BAL63656.1| pseudo-response regulator [Triticum durum]
gi|379025760|dbj|BAL63657.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 147 VRK 149
R+
Sbjct: 158 WRR 160
>gi|220031158|gb|ACL78744.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220031050|gb|ACL78690.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031058|gb|ACL78694.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031066|gb|ACL78698.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031068|gb|ACL78699.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031070|gb|ACL78700.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031076|gb|ACL78703.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031078|gb|ACL78704.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031094|gb|ACL78712.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031096|gb|ACL78713.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031100|gb|ACL78715.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031102|gb|ACL78716.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031104|gb|ACL78717.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031106|gb|ACL78718.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031108|gb|ACL78719.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031112|gb|ACL78721.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031136|gb|ACL78733.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031146|gb|ACL78738.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031148|gb|ACL78739.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031150|gb|ACL78740.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031156|gb|ACL78743.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031160|gb|ACL78745.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031162|gb|ACL78746.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031180|gb|ACL78755.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031198|gb|ACL78764.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220031046|gb|ACL78688.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031084|gb|ACL78707.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031092|gb|ACL78711.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031116|gb|ACL78723.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031118|gb|ACL78724.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031120|gb|ACL78725.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031122|gb|ACL78726.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031124|gb|ACL78727.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031126|gb|ACL78728.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031128|gb|ACL78729.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031130|gb|ACL78730.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031132|gb|ACL78731.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031134|gb|ACL78732.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031152|gb|ACL78741.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031154|gb|ACL78742.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031196|gb|ACL78763.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031200|gb|ACL78765.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031202|gb|ACL78766.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030858|gb|ACL78594.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|456359114|dbj|BAM93386.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 90
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 91 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 150
Query: 147 VRK 149
R+
Sbjct: 151 WRR 153
>gi|379025742|dbj|BAL63648.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 147 VRK 149
R+
Sbjct: 158 WRR 160
>gi|220030692|gb|ACL78511.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030696|gb|ACL78513.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030698|gb|ACL78514.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030704|gb|ACL78517.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030708|gb|ACL78519.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030722|gb|ACL78526.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030724|gb|ACL78527.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030728|gb|ACL78529.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030730|gb|ACL78530.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030734|gb|ACL78532.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030736|gb|ACL78533.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030738|gb|ACL78534.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030740|gb|ACL78535.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030742|gb|ACL78536.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030744|gb|ACL78537.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030748|gb|ACL78539.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030750|gb|ACL78540.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030752|gb|ACL78541.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030754|gb|ACL78542.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030758|gb|ACL78544.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030760|gb|ACL78545.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030762|gb|ACL78546.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030764|gb|ACL78547.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030766|gb|ACL78548.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030772|gb|ACL78551.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030774|gb|ACL78552.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030776|gb|ACL78553.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030778|gb|ACL78554.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030782|gb|ACL78556.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030784|gb|ACL78557.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030786|gb|ACL78558.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030788|gb|ACL78559.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030792|gb|ACL78561.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030794|gb|ACL78562.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030796|gb|ACL78563.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030798|gb|ACL78564.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030802|gb|ACL78566.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030804|gb|ACL78567.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030806|gb|ACL78568.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030808|gb|ACL78569.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030810|gb|ACL78570.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030820|gb|ACL78575.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030822|gb|ACL78576.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030824|gb|ACL78577.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030828|gb|ACL78579.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030830|gb|ACL78580.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030832|gb|ACL78581.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030834|gb|ACL78582.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030838|gb|ACL78584.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030846|gb|ACL78588.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030850|gb|ACL78590.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|379025526|dbj|BAL63540.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 147 VRK 149
R+
Sbjct: 158 WRR 160
>gi|379025506|dbj|BAL63530.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025508|dbj|BAL63531.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025510|dbj|BAL63532.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 147 VRK 149
R+
Sbjct: 158 WRR 160
>gi|345886077|ref|ZP_08837351.1| hypothetical protein HMPREF0178_00125 [Bilophila sp. 4_1_30]
gi|345040822|gb|EGW45046.1| hypothetical protein HMPREF0178_00125 [Bilophila sp. 4_1_30]
Length = 616
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
VLVVDDD T LRIL L R Y + AL+ + K D+VL DV MPDMDG+
Sbjct: 10 VLVVDDDPTNLRILVSKLNRE-YRLGVAKSGTKALEYMG--KQIPDLVLLDVMMPDMDGY 66
Query: 96 KLLEHIGLE---MDLPVITDGRV---SAVMRGIRHGACDYLIKPIREEE-LKNIWQHVVR 148
+ EHI + D+PV+ V S RG G DY+ KP + E L + H++
Sbjct: 67 AVCEHIKRDPRLCDIPVVFISYVDDPSQKTRGFEVGGVDYITKPFHDAEVLARVRTHIMN 126
Query: 149 KRWNENKEHENSGSLEETDHHKR 171
K+ E + N+ +E D H+R
Sbjct: 127 KQMREQLKRHNAEIGKELDEHRR 149
>gi|220030960|gb|ACL78645.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030954|gb|ACL78642.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030948|gb|ACL78639.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030862|gb|ACL78596.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031064|gb|ACL78697.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030706|gb|ACL78518.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030964|gb|ACL78647.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030930|gb|ACL78630.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030932|gb|ACL78631.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030946|gb|ACL78638.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030950|gb|ACL78640.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030890|gb|ACL78610.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030866|gb|ACL78598.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030868|gb|ACL78599.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030872|gb|ACL78601.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030878|gb|ACL78604.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030940|gb|ACL78635.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031062|gb|ACL78696.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|456359140|dbj|BAM93399.1| pseudo-response regulator [Triticum urartu]
gi|456359142|dbj|BAM93400.1| pseudo-response regulator [Triticum urartu]
gi|456359144|dbj|BAM93401.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 147 VRK 149
R+
Sbjct: 158 WRR 160
>gi|456359102|dbj|BAM93380.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 90
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 91 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 150
Query: 147 VRK 149
R+
Sbjct: 151 WRR 153
>gi|65329070|gb|AAY42110.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|65329087|gb|AAY42111.1| pseudo-response regulator PPD-H1 [Hordeum vulgare]
gi|65329107|gb|AAY42112.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030976|gb|ACL78653.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030978|gb|ACL78654.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030994|gb|ACL78662.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|62868803|gb|AAY17586.1| pseudo-response regulator [Hordeum vulgare subsp. vulgare]
Length = 674
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|319657095|gb|ADV58926.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657099|gb|ADV58928.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657103|gb|ADV58930.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
Length = 788
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 7/127 (5%)
Query: 30 FPAGL-RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
P G +VL+V+ D + I+ +LR C Y V A IL + D+VL++V
Sbjct: 91 LPVGSPKVLLVESDDSTRHIVSALLRNCSYEVVGVPNGIEAWKILEDLSNQIDLVLTEVV 150
Query: 89 MPDMDGFKLLEHIGLE---MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNI 142
+ G LL I + PVI + + V++ + GA D+L+KPIR+ ELKN+
Sbjct: 151 TSGLSGIGLLSKIMSHKSCQNTPVIMMSSHDSMGLVLKCLSKGAVDFLVKPIRKNELKNL 210
Query: 143 WQHVVRK 149
WQHV R+
Sbjct: 211 WQHVWRR 217
>gi|317485575|ref|ZP_07944452.1| sigma-54 interaction domain-containing protein [Bilophila
wadsworthia 3_1_6]
gi|316923255|gb|EFV44464.1| sigma-54 interaction domain-containing protein [Bilophila
wadsworthia 3_1_6]
Length = 616
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
VLVVDDD T LRIL L R Y + AL+ + K D+VL DV MPDMDG+
Sbjct: 10 VLVVDDDPTNLRILVSKLNRE-YRLGVAKSGTKALEYMG--KQIPDLVLLDVMMPDMDGY 66
Query: 96 KLLEHIGLE---MDLPVITDGRV---SAVMRGIRHGACDYLIKPIREEE-LKNIWQHVVR 148
+ EHI + D+PV+ V S RG G DY+ KP + E L + H++
Sbjct: 67 AVCEHIKRDPRLCDIPVVFISYVDDPSQKTRGFEVGGVDYITKPFHDAEVLARVRTHIMN 126
Query: 149 KRWNENKEHENSGSLEETDHHKR 171
K+ E + N+ +E D H+R
Sbjct: 127 KQMREQLKRHNAEIGKELDEHRR 149
>gi|220031034|gb|ACL78682.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031048|gb|ACL78689.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031054|gb|ACL78692.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030958|gb|ACL78644.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030884|gb|ACL78607.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030908|gb|ACL78619.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|456359120|dbj|BAM93389.1| pseudo-response regulator [Triticum urartu]
gi|456359122|dbj|BAM93390.1| pseudo-response regulator [Triticum urartu]
gi|456359124|dbj|BAM93391.1| pseudo-response regulator [Triticum urartu]
gi|456359126|dbj|BAM93392.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 147 VRK 149
R+
Sbjct: 158 WRR 160
>gi|423257314|ref|ZP_17238237.1| hypothetical protein HMPREF1055_00514 [Bacteroides fragilis
CL07T00C01]
gi|423265716|ref|ZP_17244719.1| hypothetical protein HMPREF1056_02406 [Bacteroides fragilis
CL07T12C05]
gi|387778790|gb|EIK40885.1| hypothetical protein HMPREF1055_00514 [Bacteroides fragilis
CL07T00C01]
gi|392703374|gb|EIY96518.1| hypothetical protein HMPREF1056_02406 [Bacteroides fragilis
CL07T12C05]
Length = 436
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 6/118 (5%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+V+D+IT +I++ L R Y V T A +LR K FD++LSDV +P DG
Sbjct: 4 RILIVEDNITLSQIVKDWLEREGYAVATAIDEPFARKLLR--KESFDLILSDVRLPQGDG 61
Query: 95 FKLLEHIGLE-MDLPVITDGRVSAV---MRGIRHGACDYLIKPIREEELKNIWQHVVR 148
LLE I E MD+P + ++V ++ I+ GA DYL KP+ E+L + + +++
Sbjct: 62 ISLLEWINKEKMDIPFVIMTEYASVTDAVKAIKMGAKDYLAKPVFHEQLVEMVKELLK 119
>gi|220031042|gb|ACL78686.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|456359186|dbj|BAM93422.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 147 VRK 149
R+
Sbjct: 155 WRR 157
>gi|456359104|dbj|BAM93381.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359106|dbj|BAM93382.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359108|dbj|BAM93383.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359116|dbj|BAM93387.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 90
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 91 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 150
Query: 147 VRK 149
R+
Sbjct: 151 WRR 153
>gi|220030790|gb|ACL78560.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|168011157|ref|XP_001758270.1| predicted protein [Physcomitrella patens subsp. patens]
gi|55669165|gb|AAV54521.1| golden 2-like protein 2 [Physcomitrella patens]
gi|162690726|gb|EDQ77092.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 45/69 (65%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK +V W+ ELH++FV AV QLG++KA P RILELM V LTR N+ASHLQ+ + L
Sbjct: 225 KKAKVDWTPELHRRFVHAVEQLGVEKAYPSRILELMGVQCLTRHNIASHLQKYRSHRRHL 284
Query: 276 YLKRLNGVS 284
+ S
Sbjct: 285 AAREAEAAS 293
>gi|356549890|ref|XP_003543323.1| PREDICTED: transcription activator GLK1-like [Glycine max]
Length = 436
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 55/88 (62%), Gaps = 10/88 (11%)
Query: 198 SAKEEDDGELESDDPST-----TKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMN 252
S KE + G S+ S +K +V W+ ELH++FV AV QLG+DKAVP RILE+M
Sbjct: 141 SPKESEKGRKSSNHASRNNNQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMG 200
Query: 253 VPGLTRENVASHLQEINLQKFRLYLKRL 280
+ LTR N+ASH LQK+R + K L
Sbjct: 201 IDCLTRHNIASH-----LQKYRSHRKHL 223
>gi|220031098|gb|ACL78714.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220031018|gb|ACL78674.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031026|gb|ACL78678.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031028|gb|ACL78679.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030888|gb|ACL78609.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030936|gb|ACL78633.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030894|gb|ACL78612.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030860|gb|ACL78595.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031184|gb|ACL78757.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030672|gb|ACL78501.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030674|gb|ACL78502.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030686|gb|ACL78508.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030688|gb|ACL78509.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030690|gb|ACL78510.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030700|gb|ACL78515.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030702|gb|ACL78516.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030710|gb|ACL78520.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030714|gb|ACL78522.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030716|gb|ACL78523.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030718|gb|ACL78524.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030720|gb|ACL78525.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030732|gb|ACL78531.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030746|gb|ACL78538.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030756|gb|ACL78543.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030768|gb|ACL78549.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030770|gb|ACL78550.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030800|gb|ACL78565.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030812|gb|ACL78571.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030814|gb|ACL78572.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030816|gb|ACL78573.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030818|gb|ACL78574.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030826|gb|ACL78578.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030844|gb|ACL78587.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030852|gb|ACL78591.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|456359266|dbj|BAM93462.1| pseudo-response regulator [Triticum dicoccoides]
Length = 659
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 147 VRK 149
R+
Sbjct: 155 WRR 157
>gi|220030956|gb|ACL78643.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030910|gb|ACL78620.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031060|gb|ACL78695.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030906|gb|ACL78618.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030928|gb|ACL78629.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030678|gb|ACL78504.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030682|gb|ACL78506.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030684|gb|ACL78507.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030712|gb|ACL78521.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030780|gb|ACL78555.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030836|gb|ACL78583.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030840|gb|ACL78585.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220031174|gb|ACL78752.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220031022|gb|ACL78676.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030966|gb|ACL78648.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030926|gb|ACL78628.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030952|gb|ACL78641.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031038|gb|ACL78684.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030918|gb|ACL78624.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030934|gb|ACL78632.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030996|gb|ACL78663.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031044|gb|ACL78687.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031072|gb|ACL78701.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031074|gb|ACL78702.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031080|gb|ACL78705.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031082|gb|ACL78706.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031086|gb|ACL78708.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031088|gb|ACL78709.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031110|gb|ACL78720.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031138|gb|ACL78734.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031140|gb|ACL78735.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031142|gb|ACL78736.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031144|gb|ACL78737.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031164|gb|ACL78747.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031166|gb|ACL78748.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031176|gb|ACL78753.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031178|gb|ACL78754.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031182|gb|ACL78756.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031186|gb|ACL78758.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031188|gb|ACL78759.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030882|gb|ACL78606.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030896|gb|ACL78613.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030920|gb|ACL78625.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031032|gb|ACL78681.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030856|gb|ACL78593.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030870|gb|ACL78600.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030876|gb|ACL78603.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030898|gb|ACL78614.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030938|gb|ACL78634.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030944|gb|ACL78637.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030968|gb|ACL78649.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030980|gb|ACL78655.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030982|gb|ACL78656.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030988|gb|ACL78659.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030990|gb|ACL78660.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030854|gb|ACL78592.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|456359164|dbj|BAM93411.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 147 VRK 149
R+
Sbjct: 155 WRR 157
>gi|456359146|dbj|BAM93402.1| pseudo-response regulator [Triticum urartu]
gi|456359148|dbj|BAM93403.1| pseudo-response regulator [Triticum urartu]
gi|456359150|dbj|BAM93404.1| pseudo-response regulator [Triticum urartu]
gi|456359152|dbj|BAM93405.1| pseudo-response regulator [Triticum urartu]
gi|456359154|dbj|BAM93406.1| pseudo-response regulator [Triticum urartu]
gi|456359156|dbj|BAM93407.1| pseudo-response regulator [Triticum urartu]
gi|456359158|dbj|BAM93408.1| pseudo-response regulator [Triticum urartu]
gi|456359160|dbj|BAM93409.1| pseudo-response regulator [Triticum urartu]
gi|456359162|dbj|BAM93410.1| pseudo-response regulator [Triticum urartu]
gi|456359166|dbj|BAM93412.1| pseudo-response regulator [Triticum urartu]
gi|456359168|dbj|BAM93413.1| pseudo-response regulator [Triticum urartu]
gi|456359170|dbj|BAM93414.1| pseudo-response regulator [Triticum urartu]
gi|456359172|dbj|BAM93415.1| pseudo-response regulator [Triticum urartu]
gi|456359174|dbj|BAM93416.1| pseudo-response regulator [Triticum urartu]
gi|456359176|dbj|BAM93417.1| pseudo-response regulator [Triticum urartu]
gi|456359178|dbj|BAM93418.1| pseudo-response regulator [Triticum urartu]
gi|456359180|dbj|BAM93419.1| pseudo-response regulator [Triticum urartu]
gi|456359182|dbj|BAM93420.1| pseudo-response regulator [Triticum urartu]
gi|456359184|dbj|BAM93421.1| pseudo-response regulator [Triticum urartu]
gi|456359188|dbj|BAM93423.1| pseudo-response regulator [Triticum urartu]
gi|456359190|dbj|BAM93424.1| pseudo-response regulator [Triticum urartu]
gi|456359192|dbj|BAM93425.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 147 VRK 149
R+
Sbjct: 155 WRR 157
>gi|456359128|dbj|BAM93393.1| pseudo-response regulator [Triticum urartu]
gi|456359130|dbj|BAM93394.1| pseudo-response regulator [Triticum urartu]
gi|456359132|dbj|BAM93395.1| pseudo-response regulator [Triticum urartu]
gi|456359134|dbj|BAM93396.1| pseudo-response regulator [Triticum urartu]
gi|456359136|dbj|BAM93397.1| pseudo-response regulator [Triticum urartu]
gi|456359138|dbj|BAM93398.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 147 VRK 149
R+
Sbjct: 158 WRR 160
>gi|379025778|dbj|BAL63666.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 147 VRK 149
R+
Sbjct: 155 WRR 157
>gi|220031016|gb|ACL78673.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031020|gb|ACL78675.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031024|gb|ACL78677.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030886|gb|ACL78608.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030892|gb|ACL78611.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030900|gb|ACL78615.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031030|gb|ACL78680.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031036|gb|ACL78683.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031052|gb|ACL78691.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031056|gb|ACL78693.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|379025682|dbj|BAL63618.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 147 VRK 149
R+
Sbjct: 158 WRR 160
>gi|220031090|gb|ACL78710.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031114|gb|ACL78722.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031168|gb|ACL78749.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031170|gb|ACL78750.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031190|gb|ACL78760.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031192|gb|ACL78761.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031194|gb|ACL78762.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|224090570|ref|XP_002335000.1| predicted protein [Populus trichocarpa]
gi|222832552|gb|EEE71029.1| predicted protein [Populus trichocarpa]
Length = 197
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
+K +V W+ ELH++FV AV QLG+DKAVP RILELM + LTR N+ASHLQ
Sbjct: 137 RKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQ 187
>gi|220031172|gb|ACL78751.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220031040|gb|ACL78685.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030864|gb|ACL78597.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030984|gb|ACL78657.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030986|gb|ACL78658.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030992|gb|ACL78661.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030998|gb|ACL78664.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031000|gb|ACL78665.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031002|gb|ACL78666.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031004|gb|ACL78667.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031006|gb|ACL78668.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031008|gb|ACL78669.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031010|gb|ACL78670.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031012|gb|ACL78671.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030676|gb|ACL78503.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030680|gb|ACL78505.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030694|gb|ACL78512.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030842|gb|ACL78586.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030848|gb|ACL78589.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030942|gb|ACL78636.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030970|gb|ACL78650.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030902|gb|ACL78616.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030904|gb|ACL78617.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030922|gb|ACL78626.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030972|gb|ACL78651.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030880|gb|ACL78605.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|220030912|gb|ACL78621.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030914|gb|ACL78622.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|379026042|dbj|BAL63798.1| pseudo-response regulator [Triticum durum]
Length = 665
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 147 VRK 149
R+
Sbjct: 156 WRR 158
>gi|379025768|dbj|BAL63661.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025770|dbj|BAL63662.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025894|dbj|BAL63724.1| pseudo-response regulator [Triticum turanicum]
gi|379025896|dbj|BAL63725.1| pseudo-response regulator [Triticum turanicum]
gi|379025898|dbj|BAL63726.1| pseudo-response regulator [Triticum turanicum]
gi|379025900|dbj|BAL63727.1| pseudo-response regulator [Triticum turanicum]
gi|379025902|dbj|BAL63728.1| pseudo-response regulator [Triticum turanicum]
gi|379025910|dbj|BAL63732.1| pseudo-response regulator [Triticum polonicum]
gi|379025936|dbj|BAL63745.1| pseudo-response regulator [Triticum carthlicum]
gi|379026026|dbj|BAL63790.1| pseudo-response regulator [Triticum durum]
gi|379026028|dbj|BAL63791.1| pseudo-response regulator [Triticum durum]
gi|379026030|dbj|BAL63792.1| pseudo-response regulator [Triticum durum]
gi|379026032|dbj|BAL63793.1| pseudo-response regulator [Triticum durum]
gi|379026034|dbj|BAL63794.1| pseudo-response regulator [Triticum durum]
gi|379026036|dbj|BAL63795.1| pseudo-response regulator [Triticum durum]
gi|379026038|dbj|BAL63796.1| pseudo-response regulator [Triticum durum]
gi|379026040|dbj|BAL63797.1| pseudo-response regulator [Triticum durum]
gi|379026044|dbj|BAL63799.1| pseudo-response regulator [Triticum durum]
gi|379026046|dbj|BAL63800.1| pseudo-response regulator [Triticum durum]
gi|379026048|dbj|BAL63801.1| pseudo-response regulator [Triticum durum]
gi|379026050|dbj|BAL63802.1| pseudo-response regulator [Triticum durum]
gi|379026052|dbj|BAL63803.1| pseudo-response regulator [Triticum durum]
gi|379026054|dbj|BAL63804.1| pseudo-response regulator [Triticum durum]
gi|379026056|dbj|BAL63805.1| pseudo-response regulator [Triticum durum]
gi|379026058|dbj|BAL63806.1| pseudo-response regulator [Triticum durum]
gi|379026060|dbj|BAL63807.1| pseudo-response regulator [Triticum durum]
gi|379026072|dbj|BAL63813.1| pseudo-response regulator [Triticum durum]
gi|379026074|dbj|BAL63814.1| pseudo-response regulator [Triticum durum]
gi|379026076|dbj|BAL63815.1| pseudo-response regulator [Triticum durum]
gi|379026078|dbj|BAL63816.1| pseudo-response regulator [Triticum durum]
gi|379026080|dbj|BAL63817.1| pseudo-response regulator [Triticum durum]
gi|456359288|dbj|BAM93473.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 665
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 147 VRK 149
R+
Sbjct: 156 WRR 158
>gi|65329050|gb|AAY42109.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030874|gb|ACL78602.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030916|gb|ACL78623.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031014|gb|ACL78672.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|118638616|gb|ABL09464.1| pseudo-response regulator [Triticum aestivum]
gi|118638620|gb|ABL09466.1| pseudo-response regulator [Triticum aestivum]
gi|118638622|gb|ABL09467.1| pseudo-response regulator [Triticum aestivum]
gi|379025454|dbj|BAL63504.1| pseudo-response regulator [Triticum turgidum]
gi|379025456|dbj|BAL63505.1| pseudo-response regulator [Triticum turgidum]
gi|379025458|dbj|BAL63506.1| pseudo-response regulator [Triticum turgidum]
gi|379025460|dbj|BAL63507.1| pseudo-response regulator [Triticum turgidum]
gi|379025462|dbj|BAL63508.1| pseudo-response regulator [Triticum turgidum]
gi|379025464|dbj|BAL63509.1| pseudo-response regulator [Triticum carthlicum]
gi|379025466|dbj|BAL63510.1| pseudo-response regulator [Triticum carthlicum]
gi|379025468|dbj|BAL63511.1| pseudo-response regulator [Triticum carthlicum]
gi|379025470|dbj|BAL63512.1| pseudo-response regulator [Triticum carthlicum]
gi|379025472|dbj|BAL63513.1| pseudo-response regulator [Triticum carthlicum]
gi|379025474|dbj|BAL63514.1| pseudo-response regulator [Triticum turanicum]
gi|379025476|dbj|BAL63515.1| pseudo-response regulator [Triticum turanicum]
gi|379025478|dbj|BAL63516.1| pseudo-response regulator [Triticum turanicum]
gi|379025482|dbj|BAL63518.1| pseudo-response regulator [Triticum turanicum]
gi|379025490|dbj|BAL63522.1| pseudo-response regulator [Triticum polonicum]
gi|379025492|dbj|BAL63523.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025494|dbj|BAL63524.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025496|dbj|BAL63525.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025498|dbj|BAL63526.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025500|dbj|BAL63527.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025502|dbj|BAL63528.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025512|dbj|BAL63533.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025514|dbj|BAL63534.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025518|dbj|BAL63536.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025528|dbj|BAL63541.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025534|dbj|BAL63544.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025538|dbj|BAL63546.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025540|dbj|BAL63547.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025568|dbj|BAL63561.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025570|dbj|BAL63562.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025572|dbj|BAL63563.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025698|dbj|BAL63626.1| pseudo-response regulator [Triticum durum]
gi|379025700|dbj|BAL63627.1| pseudo-response regulator [Triticum durum]
gi|379025702|dbj|BAL63628.1| pseudo-response regulator [Triticum durum]
gi|379025704|dbj|BAL63629.1| pseudo-response regulator [Triticum durum]
gi|379025706|dbj|BAL63630.1| pseudo-response regulator [Triticum durum]
gi|379025708|dbj|BAL63631.1| pseudo-response regulator [Triticum durum]
gi|379025710|dbj|BAL63632.1| pseudo-response regulator [Triticum durum]
gi|379025712|dbj|BAL63633.1| pseudo-response regulator [Triticum durum]
gi|379025714|dbj|BAL63634.1| pseudo-response regulator [Triticum durum]
gi|379025716|dbj|BAL63635.1| pseudo-response regulator [Triticum durum]
gi|379025718|dbj|BAL63636.1| pseudo-response regulator [Triticum durum]
gi|379025720|dbj|BAL63637.1| pseudo-response regulator [Triticum durum]
gi|379025722|dbj|BAL63638.1| pseudo-response regulator [Triticum durum]
gi|379025724|dbj|BAL63639.1| pseudo-response regulator [Triticum durum]
gi|379025726|dbj|BAL63640.1| pseudo-response regulator [Triticum durum]
gi|379025728|dbj|BAL63641.1| pseudo-response regulator [Triticum durum]
gi|379025730|dbj|BAL63642.1| pseudo-response regulator [Triticum durum]
gi|379025732|dbj|BAL63643.1| pseudo-response regulator [Triticum durum]
gi|395759117|dbj|BAM31255.1| pseudo-response regulator [Triticum aestivum]
gi|395759119|dbj|BAM31256.1| pseudo-response regulator [Triticum aestivum]
gi|456359198|dbj|BAM93428.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 668
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 147 VRK 149
R+
Sbjct: 158 WRR 160
>gi|379025940|dbj|BAL63747.1| pseudo-response regulator [Triticum carthlicum]
gi|456359264|dbj|BAM93461.1| pseudo-response regulator [Triticum dicoccoides]
Length = 664
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 147 VRK 149
R+
Sbjct: 155 WRR 157
>gi|379025858|dbj|BAL63706.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 147 VRK 149
R+
Sbjct: 156 WRR 158
>gi|379025856|dbj|BAL63705.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025860|dbj|BAL63707.1| pseudo-response regulator [Triticum dicoccoides]
gi|379026014|dbj|BAL63784.1| pseudo-response regulator [Triticum durum]
gi|379026016|dbj|BAL63785.1| pseudo-response regulator [Triticum durum]
gi|379026018|dbj|BAL63786.1| pseudo-response regulator [Triticum durum]
gi|379026020|dbj|BAL63787.1| pseudo-response regulator [Triticum durum]
gi|379026022|dbj|BAL63788.1| pseudo-response regulator [Triticum durum]
gi|379026024|dbj|BAL63789.1| pseudo-response regulator [Triticum durum]
gi|456359268|dbj|BAM93463.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 147 VRK 149
R+
Sbjct: 156 WRR 158
>gi|379025838|dbj|BAL63696.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025840|dbj|BAL63697.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025842|dbj|BAL63698.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025844|dbj|BAL63699.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 661
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 147 VRK 149
R+
Sbjct: 155 WRR 157
>gi|118638628|gb|ABL09470.1| pseudo-response regulator [Triticum aestivum]
gi|118638630|gb|ABL09471.1| pseudo-response regulator [Triticum aestivum]
gi|118638632|gb|ABL09472.1| pseudo-response regulator [Triticum aestivum]
gi|118638634|gb|ABL09473.1| pseudo-response regulator [Triticum aestivum]
gi|118638636|gb|ABL09474.1| pseudo-response regulator [Triticum aestivum]
gi|118638638|gb|ABL09475.1| pseudo-response regulator [Triticum aestivum]
gi|118638640|gb|ABL09476.1| pseudo-response regulator [Triticum aestivum]
gi|159138015|gb|ABW89014.1| pseudo-response regulator [Triticum turgidum]
gi|159138017|gb|ABW89015.1| pseudo-response regulator [Triticum turgidum]
gi|159138019|gb|ABW89016.1| pseudo-response regulator [Triticum turgidum]
gi|159138021|gb|ABW89017.1| pseudo-response regulator [Triticum turgidum]
gi|379025772|dbj|BAL63663.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025774|dbj|BAL63664.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025776|dbj|BAL63665.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025780|dbj|BAL63667.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025782|dbj|BAL63668.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025784|dbj|BAL63669.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025786|dbj|BAL63670.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025788|dbj|BAL63671.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025790|dbj|BAL63672.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025792|dbj|BAL63673.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025794|dbj|BAL63674.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025796|dbj|BAL63675.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025800|dbj|BAL63677.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025802|dbj|BAL63678.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025804|dbj|BAL63679.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025806|dbj|BAL63680.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025808|dbj|BAL63681.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025810|dbj|BAL63682.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025812|dbj|BAL63683.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025814|dbj|BAL63684.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025816|dbj|BAL63685.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025818|dbj|BAL63686.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025820|dbj|BAL63687.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025822|dbj|BAL63688.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025824|dbj|BAL63689.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025826|dbj|BAL63690.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025828|dbj|BAL63691.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025830|dbj|BAL63692.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025832|dbj|BAL63693.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025834|dbj|BAL63694.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025836|dbj|BAL63695.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025850|dbj|BAL63702.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025852|dbj|BAL63703.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025854|dbj|BAL63704.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025864|dbj|BAL63709.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025866|dbj|BAL63710.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025868|dbj|BAL63711.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025870|dbj|BAL63712.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025872|dbj|BAL63713.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025874|dbj|BAL63714.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025876|dbj|BAL63715.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025878|dbj|BAL63716.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025880|dbj|BAL63717.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025882|dbj|BAL63718.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025884|dbj|BAL63719.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025886|dbj|BAL63720.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025888|dbj|BAL63721.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025892|dbj|BAL63723.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025912|dbj|BAL63733.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025914|dbj|BAL63734.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025916|dbj|BAL63735.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025918|dbj|BAL63736.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025920|dbj|BAL63737.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025922|dbj|BAL63738.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025926|dbj|BAL63740.1| pseudo-response regulator [Triticum turgidum]
gi|379025928|dbj|BAL63741.1| pseudo-response regulator [Triticum turgidum]
gi|379025930|dbj|BAL63742.1| pseudo-response regulator [Triticum turgidum]
gi|379025932|dbj|BAL63743.1| pseudo-response regulator [Triticum turgidum]
gi|379025934|dbj|BAL63744.1| pseudo-response regulator [Triticum carthlicum]
gi|379025938|dbj|BAL63746.1| pseudo-response regulator [Triticum carthlicum]
gi|379025942|dbj|BAL63748.1| pseudo-response regulator [Triticum carthlicum]
gi|379025944|dbj|BAL63749.1| pseudo-response regulator [Triticum durum]
gi|379025946|dbj|BAL63750.1| pseudo-response regulator [Triticum durum]
gi|379025948|dbj|BAL63751.1| pseudo-response regulator [Triticum durum]
gi|379025950|dbj|BAL63752.1| pseudo-response regulator [Triticum durum]
gi|379025952|dbj|BAL63753.1| pseudo-response regulator [Triticum durum]
gi|379025954|dbj|BAL63754.1| pseudo-response regulator [Triticum durum]
gi|379025956|dbj|BAL63755.1| pseudo-response regulator [Triticum durum]
gi|379025958|dbj|BAL63756.1| pseudo-response regulator [Triticum durum]
gi|379025960|dbj|BAL63757.1| pseudo-response regulator [Triticum durum]
gi|379025962|dbj|BAL63758.1| pseudo-response regulator [Triticum durum]
gi|379025964|dbj|BAL63759.1| pseudo-response regulator [Triticum durum]
gi|379025966|dbj|BAL63760.1| pseudo-response regulator [Triticum durum]
gi|379025968|dbj|BAL63761.1| pseudo-response regulator [Triticum durum]
gi|379025970|dbj|BAL63762.1| pseudo-response regulator [Triticum durum]
gi|379025972|dbj|BAL63763.1| pseudo-response regulator [Triticum durum]
gi|379025974|dbj|BAL63764.1| pseudo-response regulator [Triticum durum]
gi|379025976|dbj|BAL63765.1| pseudo-response regulator [Triticum durum]
gi|379025978|dbj|BAL63766.1| pseudo-response regulator [Triticum durum]
gi|379025980|dbj|BAL63767.1| pseudo-response regulator [Triticum durum]
gi|379025982|dbj|BAL63768.1| pseudo-response regulator [Triticum durum]
gi|379025984|dbj|BAL63769.1| pseudo-response regulator [Triticum durum]
gi|379025986|dbj|BAL63770.1| pseudo-response regulator [Triticum durum]
gi|379025988|dbj|BAL63771.1| pseudo-response regulator [Triticum durum]
gi|379025990|dbj|BAL63772.1| pseudo-response regulator [Triticum durum]
gi|379025992|dbj|BAL63773.1| pseudo-response regulator [Triticum durum]
gi|379025994|dbj|BAL63774.1| pseudo-response regulator [Triticum durum]
gi|379025996|dbj|BAL63775.1| pseudo-response regulator [Triticum durum]
gi|379025998|dbj|BAL63776.1| pseudo-response regulator [Triticum durum]
gi|379026000|dbj|BAL63777.1| pseudo-response regulator [Triticum durum]
gi|379026002|dbj|BAL63778.1| pseudo-response regulator [Triticum durum]
gi|379026004|dbj|BAL63779.1| pseudo-response regulator [Triticum durum]
gi|379026006|dbj|BAL63780.1| pseudo-response regulator [Triticum durum]
gi|379026008|dbj|BAL63781.1| pseudo-response regulator [Triticum durum]
gi|379026010|dbj|BAL63782.1| pseudo-response regulator [Triticum durum]
gi|379026012|dbj|BAL63783.1| pseudo-response regulator [Triticum durum]
gi|379026062|dbj|BAL63808.1| pseudo-response regulator [Triticum durum]
gi|379026064|dbj|BAL63809.1| pseudo-response regulator [Triticum durum]
gi|379026066|dbj|BAL63810.1| pseudo-response regulator [Triticum durum]
gi|379026068|dbj|BAL63811.1| pseudo-response regulator [Triticum durum]
gi|379026070|dbj|BAL63812.1| pseudo-response regulator [Triticum durum]
gi|379026084|dbj|BAL63819.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|383215300|gb|AFG73164.1| pseudo-response regulator [Triticum aestivum]
gi|395759121|dbj|BAM31257.1| pseudo-response regulator [Triticum aestivum]
gi|395759123|dbj|BAM31258.1| pseudo-response regulator [Triticum aestivum]
gi|456359244|dbj|BAM93451.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359246|dbj|BAM93452.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359270|dbj|BAM93464.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359272|dbj|BAM93465.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359274|dbj|BAM93466.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359276|dbj|BAM93467.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359278|dbj|BAM93468.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359280|dbj|BAM93469.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359282|dbj|BAM93470.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359284|dbj|BAM93471.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359286|dbj|BAM93472.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 664
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 147 VRK 149
R+
Sbjct: 155 WRR 157
>gi|65329125|gb|AAY42113.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp.
spontaneum]
Length = 676
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 43 IRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 102
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 103 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 162
Query: 147 VRK 149
R+
Sbjct: 163 WRR 165
>gi|414866555|tpg|DAA45112.1| TPA: putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELH++FV AVNQLG DKA PK I+ LM VPGLT ++ SHLQ+ L
Sbjct: 48 STDAKPRLKWTPELHERFVEAVNQLGGPDKATPKTIMRLMGVPGLTLYHLKSHLQKYRLS 107
Query: 272 KFRLYLKRLNGVSQQG--GITNSFCAPIETN 300
K + NGV+ + G T + P+E N
Sbjct: 108 KN--IHAQANGVNAKNVIGCTMAMDKPLEGN 136
>gi|159154683|gb|ABW93669.1| pseudo-response regulator [Triticum turgidum]
gi|379025504|dbj|BAL63529.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025524|dbj|BAL63539.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025530|dbj|BAL63542.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025532|dbj|BAL63543.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025536|dbj|BAL63545.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025544|dbj|BAL63549.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025546|dbj|BAL63550.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025548|dbj|BAL63551.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025550|dbj|BAL63552.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025552|dbj|BAL63553.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025554|dbj|BAL63554.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025556|dbj|BAL63555.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025558|dbj|BAL63556.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025560|dbj|BAL63557.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025562|dbj|BAL63558.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025564|dbj|BAL63559.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025642|dbj|BAL63598.1| pseudo-response regulator [Triticum durum]
gi|379025766|dbj|BAL63660.1| pseudo-response regulator [Triticum durum]
gi|456359070|dbj|BAM93364.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359090|dbj|BAM93374.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359200|dbj|BAM93429.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
gi|456359202|dbj|BAM93430.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359210|dbj|BAM93434.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359212|dbj|BAM93435.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359218|dbj|BAM93438.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 147 VRK 149
R+
Sbjct: 158 WRR 160
>gi|168059575|ref|XP_001781777.1| predicted protein [Physcomitrella patens subsp. patens]
gi|55669163|gb|AAV54520.1| golden 2-like protein 1 [Physcomitrella patens]
gi|162666779|gb|EDQ53425.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 511
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 45/69 (65%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK +V W+ ELH++FV AV QLG++KA P RILELM V LTR N+ASHLQ+ + L
Sbjct: 221 KKAKVDWTPELHRRFVHAVEQLGVEKAFPSRILELMGVQCLTRHNIASHLQKYRSHRRHL 280
Query: 276 YLKRLNGVS 284
+ S
Sbjct: 281 AAREAEAAS 289
>gi|379025520|dbj|BAL63537.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025522|dbj|BAL63538.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359208|dbj|BAM93433.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 147 VRK 149
R+
Sbjct: 158 WRR 160
>gi|153004813|ref|YP_001379138.1| two component sigma54 specific Fis family transcriptional regulator
[Anaeromyxobacter sp. Fw109-5]
gi|152028386|gb|ABS26154.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Anaeromyxobacter sp. Fw109-5]
Length = 470
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
VL+VDD++ R+L ML+R Y VTT + AL +L K VV++D+ MP + G
Sbjct: 4 VLIVDDEVNIRRVLAAMLKREGYEVTTAADGEQALGVL--HKTPVHVVVTDLVMPKVGGM 61
Query: 96 KLLEHIGLEM-DLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 148
+LL +G + D+PVI G V + + ++ GA DY+ KP ++ELK + R
Sbjct: 62 ELLRRVGADFPDVPVIMITAHGSVDSAVGALKAGAFDYITKPFEQDELKKVIAKAAR 118
>gi|423204367|ref|ZP_17190923.1| hypothetical protein HMPREF1168_00558 [Aeromonas veronii AMC34]
gi|404627232|gb|EKB24037.1| hypothetical protein HMPREF1168_00558 [Aeromonas veronii AMC34]
Length = 426
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+VDDD++ L+++ LR Y V T A ALD LR+++ D+VLSD+ M MDG
Sbjct: 3 RILLVDDDVSLLKLMSMRLRSQGYEVDTADSAEGALDRLRQQRA--DLVLSDLRMGGMDG 60
Query: 95 FKLLEHIGLE-MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
L E I + + LPVI G + ++ R G +L KPI ++EL +H +
Sbjct: 61 LALFERIQAQWLGLPVIIMTAHGTIPDAIQATRSGVFSFLTKPINKDELLATIEHAL 117
>gi|379025862|dbj|BAL63708.1| pseudo-response regulator [Triticum dicoccoides]
Length = 664
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 147 VRK 149
R+
Sbjct: 155 WRR 157
>gi|379025798|dbj|BAL63676.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 147 VRK 149
R+
Sbjct: 155 WRR 157
>gi|456359204|dbj|BAM93431.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 147 VRK 149
R+
Sbjct: 158 WRR 160
>gi|413925155|gb|AFW65087.1| hypothetical protein ZEAMMB73_389889 [Zea mays]
Length = 319
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Query: 69 ALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLE---MDLPVI---TDGRVSAVMRGI 122
A ++RER FD+VL++V MP + G +LL I ++PV+ + + V++ +
Sbjct: 3 AWGVMRERAYAFDLVLTEVAMPSLSGIQLLSRIVAADECKNIPVVMMSSQDSIGTVLKCM 62
Query: 123 RHGACDYLIKPIREEELKNIWQHVVRK 149
+ GA D+L+KP+R+ EL+N+WQHV R+
Sbjct: 63 QKGAVDFLVKPVRKNELRNLWQHVWRR 89
>gi|456359290|dbj|BAM93474.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 664
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTQQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 147 VRK 149
R+
Sbjct: 155 WRR 157
>gi|456359262|dbj|BAM93460.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 147 VRK 149
R+
Sbjct: 156 WRR 158
>gi|356542986|ref|XP_003539944.1| PREDICTED: transcription activator GLK1-like [Glycine max]
Length = 428
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
+K +V W+ ELH++FV AV QLG+DKAVP RILE+M + LTR N+ASH LQK+R
Sbjct: 174 RKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASH-----LQKYRS 228
Query: 276 YLKRL 280
+ K L
Sbjct: 229 HRKHL 233
>gi|379025516|dbj|BAL63535.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359206|dbj|BAM93432.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 147 VRK 149
R+
Sbjct: 158 WRR 160
>gi|379025890|dbj|BAL63722.1| pseudo-response regulator [Triticum dicoccoides]
Length = 660
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 147 VRK 149
R+
Sbjct: 156 WRR 158
>gi|295913207|gb|ADG57862.1| transcription factor [Lycoris longituba]
Length = 196
Score = 74.3 bits (181), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/69 (52%), Positives = 46/69 (66%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
KK +V W+ ELH+ FV AV QLG+DKAVP RILELM + LTR N+ASHLQ+ + L
Sbjct: 38 KKAKVDWTPELHRSFVQAVEQLGVDKAVPSRILELMGIVCLTRHNIASHLQKYRSHRKHL 97
Query: 276 YLKRLNGVS 284
+ + S
Sbjct: 98 LAREVEAAS 106
>gi|379025488|dbj|BAL63521.1| pseudo-response regulator [Triticum polonicum]
gi|379025734|dbj|BAL63644.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 147 VRK 149
R+
Sbjct: 158 WRR 160
>gi|124003289|ref|ZP_01688139.1| two-component hybrid sensor and regulator [Microscilla marina ATCC
23134]
gi|123991387|gb|EAY30818.1| two-component hybrid sensor and regulator [Microscilla marina ATCC
23134]
Length = 1269
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 7/133 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+++LVVDD+ L++LE L YN+T S AL I++E K FD++L DV MP M
Sbjct: 885 VKILVVDDEPVNLQVLENHLSIQNYNITQASDGLKALKIIKESKEPFDIILLDVMMPKMS 944
Query: 94 GFKLLEHIGLE---MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEE-LKNIWQHV 146
G+++ I ++LPV+ + ++ G GA DYL KP + E L I HV
Sbjct: 945 GYEVCRTIRERFPLVELPVLMLTAKNQPKDIVEGFDAGANDYLTKPFSKVELLSRIKTHV 1004
Query: 147 VRKRWNENKEHEN 159
+ K +EN + N
Sbjct: 1005 LLKLTSENLQTAN 1017
>gi|195607208|gb|ACG25434.1| transcription factor ZmGLK1 [Zea mays]
Length = 460
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 46/65 (70%), Gaps = 5/65 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
+K +V W+ ELH++FV AV QLGIDKAVP RILE+M LTR N+ASH LQK+R
Sbjct: 182 RKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGTDCLTRHNIASH-----LQKYRS 236
Query: 276 YLKRL 280
+ K L
Sbjct: 237 HRKHL 241
>gi|379025542|dbj|BAL63548.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PV+ + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVVMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 147 VRK 149
R+
Sbjct: 158 WRR 160
>gi|162459635|ref|NP_001105513.1| golden plant2 [Zea mays]
gi|11177540|gb|AAG32325.1|AF298118_1 putative transcription factor Golden2 [Zea mays]
gi|13940494|gb|AAK50391.1|AF318579_1 putative transcription factor GOLDEN 2 [Zea mays]
gi|223946903|gb|ACN27535.1| unknown [Zea mays]
gi|414875563|tpg|DAA52694.1| TPA: golden plant2 [Zea mays]
Length = 461
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 46/65 (70%), Gaps = 5/65 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
+K +V W+ ELH++FV AV QLGIDKAVP RILE+M LTR N+ASH LQK+R
Sbjct: 183 RKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGTDCLTRHNIASH-----LQKYRS 237
Query: 276 YLKRL 280
+ K L
Sbjct: 238 HRKHL 242
>gi|195614160|gb|ACG28910.1| transcription factor ZmGLK1 [Zea mays]
Length = 461
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 46/65 (70%), Gaps = 5/65 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
+K +V W+ ELH++FV AV QLGIDKAVP RILE+M LTR N+ASH LQK+R
Sbjct: 183 RKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGTDCLTRHNIASH-----LQKYRS 237
Query: 276 YLKRL 280
+ K L
Sbjct: 238 HRKHL 242
>gi|242051445|ref|XP_002454868.1| hypothetical protein SORBIDRAFT_03g000400 [Sorghum bicolor]
gi|241926843|gb|EER99987.1| hypothetical protein SORBIDRAFT_03g000400 [Sorghum bicolor]
Length = 497
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 5/64 (7%)
Query: 217 KPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLY 276
K +V W+ ELH++FV AV QLGIDKAVP RILE+M + LTR N+ASH LQK+R +
Sbjct: 196 KRKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGMDCLTRHNIASH-----LQKYRSH 250
Query: 277 LKRL 280
K L
Sbjct: 251 RKHL 254
>gi|456359110|dbj|BAM93384.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 31 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 90
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 91 SGIDLLGRIMNHEVCKDIPVIMMSSHDLMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 150
Query: 147 VRK 149
R+
Sbjct: 151 WRR 153
>gi|224132880|ref|XP_002327903.1| predicted protein [Populus trichocarpa]
gi|222837312|gb|EEE75691.1| predicted protein [Populus trichocarpa]
Length = 147
Score = 74.3 bits (181), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/62 (58%), Positives = 45/62 (72%), Gaps = 5/62 (8%)
Query: 219 RVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLK 278
+V W+ ELH++FV AV QLG+DKAVP RILELM + LTR N+ASH LQK+R + K
Sbjct: 2 KVDWTPELHRRFVQAVEQLGVDKAVPSRILELMGIDCLTRHNIASH-----LQKYRSHQK 56
Query: 279 RL 280
L
Sbjct: 57 HL 58
>gi|255553629|ref|XP_002517855.1| DNA binding protein, putative [Ricinus communis]
gi|223542837|gb|EEF44373.1| DNA binding protein, putative [Ricinus communis]
Length = 424
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
+K +V W+ +LH++FV AV QLG+DKAVP RILELM + LTR N+ASH LQK+R
Sbjct: 148 RKVKVDWTPDLHRRFVQAVEQLGVDKAVPSRILELMGIDCLTRHNIASH-----LQKYRS 202
Query: 276 YLKRL 280
+ K L
Sbjct: 203 HRKHL 207
>gi|312281493|dbj|BAJ33612.1| unnamed protein product [Thellungiella halophila]
Length = 288
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 45/62 (72%), Gaps = 5/62 (8%)
Query: 219 RVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLK 278
+V W+ ELH++FV AV QLG++KAVP RILELM V LTR NVASH LQK+R + K
Sbjct: 16 KVDWTAELHRRFVEAVEQLGVEKAVPSRILELMGVHCLTRHNVASH-----LQKYRSHRK 70
Query: 279 RL 280
L
Sbjct: 71 HL 72
>gi|218200280|gb|EEC82707.1| hypothetical protein OsI_27377 [Oryza sativa Indica Group]
Length = 345
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELH++FV AVNQLG DKA PK I+ LM +PGLT ++ SHLQ+ L
Sbjct: 48 STDAKPRLKWTSELHERFVEAVNQLGGPDKATPKTIMRLMGIPGLTLYHLKSHLQKYRLS 107
Query: 272 K 272
K
Sbjct: 108 K 108
>gi|115474151|ref|NP_001060674.1| Os07g0685300 [Oryza sativa Japonica Group]
gi|113612210|dbj|BAF22588.1| Os07g0685300 [Oryza sativa Japonica Group]
gi|222637706|gb|EEE67838.1| hypothetical protein OsJ_25625 [Oryza sativa Japonica Group]
Length = 345
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELH++FV AVNQLG DKA PK I+ LM +PGLT ++ SHLQ+ L
Sbjct: 48 STDAKPRLKWTSELHERFVEAVNQLGGPDKATPKTIMRLMGIPGLTLYHLKSHLQKYRLS 107
Query: 272 K 272
K
Sbjct: 108 K 108
>gi|226525292|gb|ACO70891.1| putative PAS/PAC sensor protein [uncultured Verrucomicrobia
bacterium]
Length = 886
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
RVL+VDD++ LR+ EQ+L+R Y VT C A AL+ILR+ FDVVL+D++MP M G
Sbjct: 753 RVLLVDDELPVLRVAEQLLQRLGYEVTACCGPAAALEILRQDTTFFDVVLTDLNMPQMTG 812
Query: 95 F-------KLLEHIGLEMDLPVITDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
++ IG+ + + DG V R G + + KP L QH +
Sbjct: 813 TDVAAEIRRIAPEIGIVLATGYLGDGAVEE--RAAEIGIEEIVAKPYTPAALGGAVQHAI 870
Query: 148 RK 149
K
Sbjct: 871 AK 872
>gi|418529912|ref|ZP_13095839.1| chemotaxis protein CheA [Comamonas testosteroni ATCC 11996]
gi|371452968|gb|EHN65993.1| chemotaxis protein CheA [Comamonas testosteroni ATCC 11996]
Length = 2158
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 76/146 (52%), Gaps = 15/146 (10%)
Query: 11 SGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVAL 70
SGG+ + AA VP VLVVDD IT R+ +++L+R Y VT + A+
Sbjct: 2000 SGGADLLGAEAAQTTVP-------LVLVVDDSITVRRVTQRLLQREGYRVTLAADGLQAM 2052
Query: 71 DILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIT-DGRVSAVMRGIRH-- 124
+ L++ + VLSD+ MP MDGF LL +I + L PV+ R++ R +
Sbjct: 2053 ERLQDERPTL--VLSDIEMPRMDGFDLLRNIRADQKLEGMPVVMITSRIAQKHREMARDL 2110
Query: 125 GACDYLIKPIREEELKNIWQHVVRKR 150
GA YL KP +EEL + QH +R
Sbjct: 2111 GANHYLGKPYSDEELLGLIQHYALQR 2136
>gi|34394528|dbj|BAC83815.1| transfactor-like protein [Oryza sativa Japonica Group]
Length = 339
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELH++FV AVNQLG DKA PK I+ LM +PGLT ++ SHLQ+ L
Sbjct: 42 STDAKPRLKWTSELHERFVEAVNQLGGPDKATPKTIMRLMGIPGLTLYHLKSHLQKYRLS 101
Query: 272 K 272
K
Sbjct: 102 K 102
>gi|13940498|gb|AAK50393.1|AF318581_1 putative transcription factor OsGLK1 [Oryza sativa Indica Group]
Length = 455
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 5/61 (8%)
Query: 220 VVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKR 279
V W+ ELH++FV AV QLGIDKAVP RILE+M + LTR N+ASH LQK+R + K
Sbjct: 183 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASH-----LQKYRSHRKH 237
Query: 280 L 280
+
Sbjct: 238 M 238
>gi|125555252|gb|EAZ00858.1| hypothetical protein OsI_22886 [Oryza sativa Indica Group]
Length = 448
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 5/61 (8%)
Query: 220 VVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKR 279
V W+ ELH++FV AV QLGIDKAVP RILE+M + LTR N+ASH LQK+R + K
Sbjct: 176 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASH-----LQKYRSHRKH 230
Query: 280 L 280
+
Sbjct: 231 M 231
>gi|125597151|gb|EAZ36931.1| hypothetical protein OsJ_21268 [Oryza sativa Japonica Group]
Length = 448
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 5/61 (8%)
Query: 220 VVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKR 279
V W+ ELH++FV AV QLGIDKAVP RILE+M + LTR N+ASH LQK+R + K
Sbjct: 176 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASH-----LQKYRSHRKH 230
Query: 280 L 280
+
Sbjct: 231 M 231
>gi|411011708|ref|ZP_11388037.1| two-component system response regulator [Aeromonas aquariorum AAK1]
Length = 426
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 13/129 (10%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+VDDD + L+++ LR Y V T A ALD LR+++ D+VLSD+ M MDG
Sbjct: 3 RILLVDDDASLLKLMSMRLRSQGYEVDTADSAEGALDRLRQQRA--DLVLSDLRMAGMDG 60
Query: 95 FKLLEHIGLE-MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV--- 147
L E I + + LPVI G + ++ R G +L KPI ++EL +H +
Sbjct: 61 LALFERIQSQWLGLPVIIMTAHGTIPDAIQATRSGVFSFLTKPIDKDELFATIEHALSLT 120
Query: 148 ----RKRWN 152
R+ W
Sbjct: 121 RPKQRQEWQ 129
>gi|75321927|sp|Q5Z5I4.1|GLK1_ORYSJ RecName: Full=Probable transcription factor GLK1; AltName:
Full=Golden2-like protein 1; Short=OsGLK1
gi|54291302|dbj|BAD62070.1| putative golden2-like transcription factor [Oryza sativa Japonica
Group]
gi|215694412|dbj|BAG89405.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704371|dbj|BAG93805.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 455
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 5/61 (8%)
Query: 220 VVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKR 279
V W+ ELH++FV AV QLGIDKAVP RILE+M + LTR N+ASH LQK+R + K
Sbjct: 183 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASH-----LQKYRSHRKH 237
Query: 280 L 280
+
Sbjct: 238 M 238
>gi|456359112|dbj|BAM93385.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359118|dbj|BAM93388.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 31 IRVLLVETDDSTRQVVIALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 90
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 91 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 150
Query: 147 VRK 149
R+
Sbjct: 151 WRR 153
>gi|254000327|ref|YP_003052390.1| Fis family two component sigma54 specific transcriptional regulator
[Methylovorus glucosetrophus SIP3-4]
gi|253987006|gb|ACT51863.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Methylovorus glucosetrophus SIP3-4]
Length = 457
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 6/110 (5%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L +DD+ R+LE LR+ Y ALDILRE G D+V+SD+HMP MDG
Sbjct: 6 RILALDDEPNMRRLLEISLRQAGYQPVVAENGREALDILRE--GGADLVVSDLHMPVMDG 63
Query: 95 FKLLEHI---GLEMDLPVIT-DGRVSAVMRGIRHGACDYLIKPIREEELK 140
+LL+ + GL++ + ++T G +S + ++ GA DY+++P E L+
Sbjct: 64 LQLLQAMQKEGLQVPVIIVTAQGEISTAVAAMKLGASDYILRPFDLETLE 113
>gi|297539092|ref|YP_003674861.1| Fis family two component sigma54 specific transcriptional regulator
[Methylotenera versatilis 301]
gi|297258439|gb|ADI30284.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Methylotenera versatilis 301]
Length = 456
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 6/110 (5%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L VDD+ R+LE LR+ Y AL ILR D+V+SD+HMP MDG
Sbjct: 6 RILAVDDEPHMRRLLEISLRQAGYQPVVAENGKEALTILR--NDNIDLVVSDLHMPVMDG 63
Query: 95 FKLLEHIGLE-MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELK 140
KLLE + E +D PVI G +S+ ++ ++ GA DY+++P E L+
Sbjct: 64 LKLLEALRAENIDTPVIIVTAQGEISSAVQAMKLGASDYILRPFDLETLE 113
>gi|452820793|gb|EME27831.1| myb family transcription factor [Galdieria sulphuraria]
Length = 552
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 49/71 (69%), Gaps = 5/71 (7%)
Query: 209 SDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 268
S D S T K R++W+ ELH +F+ AVN +G++ AVPK IL LMNV GLT E+V SH
Sbjct: 316 SADGSKTLKKRLIWTPELHDRFLKAVNAVGVNNAVPKTILYLMNVEGLTSEHVKSH---- 371
Query: 269 NLQKFRLYLKR 279
LQK+R LK+
Sbjct: 372 -LQKYRNNLKK 381
>gi|379025576|dbj|BAL63565.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025578|dbj|BAL63566.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025580|dbj|BAL63567.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025582|dbj|BAL63568.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359194|dbj|BAM93426.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359196|dbj|BAM93427.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359220|dbj|BAM93439.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359222|dbj|BAM93440.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL+++ M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 147 VRK 149
R+
Sbjct: 158 WRR 160
>gi|414875562|tpg|DAA52693.1| TPA: golden plant2 [Zea mays]
Length = 459
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 219 RVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLK 278
+V W+ ELH++FV AV QLGIDKAVP RILE+M LTR N+ASH LQK+R + K
Sbjct: 184 KVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGTDCLTRHNIASH-----LQKYRSHRK 238
Query: 279 RL 280
L
Sbjct: 239 HL 240
>gi|379025574|dbj|BAL63564.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL+++ M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 147 VRK 149
R+
Sbjct: 158 WRR 160
>gi|313202285|ref|YP_004040943.1| Fis family two component sigma54 specific transcriptional regulator
[Methylovorus sp. MP688]
gi|312441601|gb|ADQ85707.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Methylovorus sp. MP688]
Length = 457
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 6/110 (5%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L +DD+ R+LE LR+ Y ALDILRE G D+V+SD+HMP MDG
Sbjct: 6 RILALDDEPNMRRLLEISLRQAGYQPVVAENGREALDILRE--GGADLVVSDLHMPVMDG 63
Query: 95 FKLLEHI---GLEMDLPVIT-DGRVSAVMRGIRHGACDYLIKPIREEELK 140
+LL+ + GL++ + ++T G +S + ++ GA DY+++P E L+
Sbjct: 64 LQLLQAMQKEGLQVPVIIVTAQGEISTAVAAMKLGASDYILRPFDLETLE 113
>gi|456359092|dbj|BAM93375.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359094|dbj|BAM93376.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359096|dbj|BAM93377.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359098|dbj|BAM93378.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359100|dbj|BAM93379.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359224|dbj|BAM93441.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL+++ M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 147 VRK 149
R+
Sbjct: 158 WRR 160
>gi|456359072|dbj|BAM93365.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359074|dbj|BAM93366.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359076|dbj|BAM93367.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359078|dbj|BAM93368.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359080|dbj|BAM93369.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359082|dbj|BAM93370.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359084|dbj|BAM93371.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359086|dbj|BAM93372.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359088|dbj|BAM93373.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 668
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL+++ M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEMFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 147 VRK 149
R+
Sbjct: 158 WRR 160
>gi|449015491|dbj|BAM78893.1| MYB-related protein [Cyanidioschyzon merolae strain 10D]
Length = 798
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Query: 209 SDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 268
+D S +K R+VW+ +LH++FV AVN +G+D+A+PK ++ LMNV GLT E+V SH
Sbjct: 506 ADSASIMRKRRLVWTPQLHERFVKAVNLIGVDQAMPKILVSLMNVEGLTPEHVKSH---- 561
Query: 269 NLQKFRLYLKR 279
LQK+R L+R
Sbjct: 562 -LQKYRRNLRR 571
>gi|299534051|ref|ZP_07047403.1| CheA signal transduction histidine kinase [Comamonas testosteroni
S44]
gi|298717960|gb|EFI58965.1| CheA signal transduction histidine kinase [Comamonas testosteroni
S44]
Length = 2186
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 76/146 (52%), Gaps = 15/146 (10%)
Query: 11 SGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVAL 70
SGG+ + AA VP VLVVDD IT R+ +++L+R Y VT + A+
Sbjct: 2027 SGGADLLGAEAAQTTVP-------LVLVVDDSITVRRVTQRLLQREGYRVTLAADGLQAM 2079
Query: 71 DILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDL---PVIT-DGRVSAVMRGIRH-- 124
+ L++ + VLSD+ MP MDGF LL +I + L PV+ R++ R +
Sbjct: 2080 ERLQDERPTL--VLSDIEMPRMDGFDLLRNIRADQTLEGMPVVMITSRIAQKHREMARDL 2137
Query: 125 GACDYLIKPIREEELKNIWQHVVRKR 150
GA YL KP +EEL + QH +R
Sbjct: 2138 GANHYLGKPYSDEELLGLIQHYALQR 2163
>gi|118638626|gb|ABL09469.1| truncated pseudo-response regulator [Triticum aestivum]
gi|383215295|gb|AFG73160.1| pseudo-response regulator [Triticum aestivum]
Length = 432
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHNSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 147 VRK 149
R+
Sbjct: 155 WRR 157
>gi|297605773|ref|NP_001057583.2| Os06g0348800 [Oryza sativa Japonica Group]
gi|54291303|dbj|BAD62071.1| putative golden2-like transcription factor [Oryza sativa Japonica
Group]
gi|255677022|dbj|BAF19497.2| Os06g0348800 [Oryza sativa Japonica Group]
Length = 422
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 5/61 (8%)
Query: 220 VVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKR 279
V W+ ELH++FV AV QLGIDKAVP RILE+M + LTR N+ASH LQK+R + K
Sbjct: 150 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASH-----LQKYRSHRKH 204
Query: 280 L 280
+
Sbjct: 205 M 205
>gi|224126559|ref|XP_002329584.1| pseudo response regulator [Populus trichocarpa]
gi|222870293|gb|EEF07424.1| pseudo response regulator [Populus trichocarpa]
Length = 420
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 44/57 (77%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 272
KK +V W+ ELH++FV V +LG+D+A+P R+LELM V LTR NVASHLQ+ +++
Sbjct: 287 KKMKVDWTPELHKKFVQVVEKLGVDQAIPSRVLELMKVESLTRHNVASHLQKYRMRR 343
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 7/134 (5%)
Query: 23 DVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDV 82
D++ FP GL VL++D+D + ++ L Y V T AL + G F V
Sbjct: 7 DLSAWKDFPKGLSVLLLDEDNSSAAEIKSKLEALDYIVYTFCNENEALLAISNEPGSFHV 66
Query: 83 VLSDVHMPDMDG-FKLLEHIGLEMDLPVITDGRV---SAVMRGIRHGACDYLIKPIREEE 138
+ +V + +G FK LE DLP I + + +M+ I GA ++L KP+ E++
Sbjct: 67 AIVEVSTSNSNGSFKFLE---TAKDLPTIMTSNIHCLNTMMKCIALGAVEFLRKPLSEDK 123
Query: 139 LKNIWQHVVRKRWN 152
L+NIWQHVV K +N
Sbjct: 124 LRNIWQHVVHKAFN 137
>gi|224101365|ref|XP_002312250.1| predicted protein [Populus trichocarpa]
gi|222852070|gb|EEE89617.1| predicted protein [Populus trichocarpa]
Length = 296
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELHQ+FV AVNQLG DKA PK ++ +M +PGLT ++ SHLQ +LQ
Sbjct: 6 STDAKPRLKWTQELHQRFVEAVNQLGGADKATPKSLMRVMGIPGLTLYHLKSHLQAFSLQ 65
Query: 272 KFRLYLKRLNGVSQ 285
++ L N Q
Sbjct: 66 NDQINLCYYNAEKQ 79
>gi|242041077|ref|XP_002467933.1| hypothetical protein SORBIDRAFT_01g036680 [Sorghum bicolor]
gi|241921787|gb|EER94931.1| hypothetical protein SORBIDRAFT_01g036680 [Sorghum bicolor]
Length = 353
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELH++FV AVNQLG DKA PK I+ LM VPGLT ++ SHLQ+ L
Sbjct: 43 STDAKPRLKWTPELHERFVEAVNQLGGPDKATPKTIMRLMGVPGLTLYHLKSHLQKYRLS 102
Query: 272 K 272
K
Sbjct: 103 K 103
>gi|325108669|ref|YP_004269737.1| Fis family transcriptionel regulator [Planctomyces brasiliensis DSM
5305]
gi|324968937|gb|ADY59715.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Planctomyces brasiliensis DSM 5305]
Length = 462
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 68/126 (53%), Gaps = 8/126 (6%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDD L + LR+ Y T + A+D +RE F+VV+ DVH+PD DGF
Sbjct: 8 LLVVDDDKFILEAMADYLRKLGYRTETAATCGEAMDRMREFP--FEVVICDVHLPDQDGF 65
Query: 96 KLLEHIGLEM-DLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV--RK 149
+LLE E + VI G + + + IR GA DYL KP+ ++EL Q + RK
Sbjct: 66 QLLEWASKEQPETSVIMLTGYGTIESAVEAIRIGAFDYLTKPVIDDELNLSIQRALGQRK 125
Query: 150 RWNENK 155
ENK
Sbjct: 126 IVEENK 131
>gi|423198665|ref|ZP_17185248.1| hypothetical protein HMPREF1171_03280 [Aeromonas hydrophila SSU]
gi|404629855|gb|EKB26580.1| hypothetical protein HMPREF1171_03280 [Aeromonas hydrophila SSU]
Length = 426
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 13/129 (10%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+VDDD + L+++ LR Y V T A ALD LR+++ D+VLSD+ M MDG
Sbjct: 3 RILLVDDDASLLKLMSMRLRSQGYEVDTADSAEGALDRLRQQRA--DLVLSDLRMAGMDG 60
Query: 95 FKLLEHIGLE-MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV--- 147
L E I + + LPVI G + ++ R G +L KPI ++EL +H +
Sbjct: 61 LALFERIQSQWLGLPVIIMTAHGTIPDAIQATRSGVFSFLTKPIDKDELFATIEHALSLT 120
Query: 148 ----RKRWN 152
R+ W
Sbjct: 121 RPKQRQEWQ 129
>gi|264680118|ref|YP_003280027.1| chemotaxis protein CheA [Comamonas testosteroni CNB-2]
gi|262210633|gb|ACY34731.1| CheA signal transduction histidine kinase [Comamonas testosteroni
CNB-2]
Length = 2199
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 75/146 (51%), Gaps = 15/146 (10%)
Query: 11 SGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVAL 70
SGG+ + AA VP VLVVDD IT R+ +++L+R Y VT + A+
Sbjct: 2040 SGGADLLGAEAAQTTVP-------LVLVVDDSITVRRVTQRLLQREGYRVTLAADGLQAM 2092
Query: 71 DILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLP----VITDGRVSAVMRGIRH-- 124
+ L++ + VLSD+ MP MDGF LL +I + L V+ R++ R +
Sbjct: 2093 ERLQDERPTL--VLSDIEMPRMDGFDLLRNIRADQTLEGMPVVMITSRIAQKHREMARDL 2150
Query: 125 GACDYLIKPIREEELKNIWQHVVRKR 150
GA YL KP +EEL + QH +R
Sbjct: 2151 GANHYLGKPYSDEELLGLIQHYALQR 2176
>gi|224097311|ref|XP_002310903.1| predicted protein [Populus trichocarpa]
gi|222853806|gb|EEE91353.1| predicted protein [Populus trichocarpa]
Length = 408
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELH++FV AVN+L G +KA PK +L+LMNV GLT +V SHLQ+ L
Sbjct: 185 STAHKPRMRWTPELHERFVEAVNKLDGAEKATPKGVLKLMNVKGLTIYHVKSHLQKYRLA 244
Query: 272 KF 273
K+
Sbjct: 245 KY 246
>gi|386393158|ref|ZP_10077939.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfovibrio sp. U5L]
gi|385734036|gb|EIG54234.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfovibrio sp. U5L]
Length = 453
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+L VDDD L +LE L Y+V T A AL++L +R +V+SD+ MP MDG
Sbjct: 11 ILAVDDDPHILEVLEVRLVSAGYDVVTAGDGAEALEVLAKRP--VKLVISDIRMPGMDGM 68
Query: 96 KLLEHIGLE-MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEEL 139
+LLE + + LP+I G + + I+HGA DYL KP +EL
Sbjct: 69 RLLEEMERRGIRLPIIFLTAHGSIPGAVEAIKHGAVDYLTKPFDGQEL 116
>gi|422978789|ref|ZP_16977772.1| transcriptional regulatory protein zraR [Escherichia coli TA124]
gi|371592409|gb|EHN81315.1| transcriptional regulatory protein zraR [Escherichia coli TA124]
Length = 441
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 6/103 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+++RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALELVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPI 134
L+ I L +PV+ S+V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|125543697|gb|EAY89836.1| hypothetical protein OsI_11384 [Oryza sativa Indica Group]
Length = 405
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELH++FV AVNQLG +KA PK I+ LM VPGLT ++ SH LQ
Sbjct: 94 STDAKPRLKWTPELHERFVEAVNQLGGPEKATPKTIMRLMGVPGLTLYHLKSH-----LQ 148
Query: 272 KFRLYLKRLNGVSQQGGITNSFCAPIET 299
K+RL K L+ + G + N+ T
Sbjct: 149 KYRLS-KNLHAQANAGNVKNALVCTTAT 175
>gi|115452767|ref|NP_001049984.1| Os03g0325500 [Oryza sativa Japonica Group]
gi|108707913|gb|ABF95708.1| transfactor, putative, expressed [Oryza sativa Japonica Group]
gi|113548455|dbj|BAF11898.1| Os03g0325500 [Oryza sativa Japonica Group]
gi|125586104|gb|EAZ26768.1| hypothetical protein OsJ_10679 [Oryza sativa Japonica Group]
Length = 354
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELH++FV AVNQLG +KA PK I+ LM VPGLT ++ SH LQ
Sbjct: 43 STDAKPRLKWTPELHERFVEAVNQLGGPEKATPKTIMRLMGVPGLTLYHLKSH-----LQ 97
Query: 272 KFRLYLKRLNGVSQQGGITNSFCAPIET 299
K+RL K L+ + G + N+ T
Sbjct: 98 KYRLS-KNLHAQANAGNVKNALVCTTAT 124
>gi|159154677|gb|ABW93666.1| pseudo-response regulator [Triticum turgidum]
gi|159154679|gb|ABW93667.1| pseudo-response regulator [Triticum turgidum]
gi|159154681|gb|ABW93668.1| pseudo-response regulator [Triticum turgidum]
gi|379025480|dbj|BAL63517.1| pseudo-response regulator [Triticum turanicum]
gi|379025484|dbj|BAL63519.1| pseudo-response regulator [Triticum turanicum]
gi|379025486|dbj|BAL63520.1| pseudo-response regulator [Triticum turanicum]
gi|379025566|dbj|BAL63560.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025644|dbj|BAL63599.1| pseudo-response regulator [Triticum durum]
gi|379025646|dbj|BAL63600.1| pseudo-response regulator [Triticum durum]
gi|379025648|dbj|BAL63601.1| pseudo-response regulator [Triticum durum]
gi|379025650|dbj|BAL63602.1| pseudo-response regulator [Triticum durum]
gi|379025652|dbj|BAL63603.1| pseudo-response regulator [Triticum durum]
gi|379025654|dbj|BAL63604.1| pseudo-response regulator [Triticum durum]
gi|379025656|dbj|BAL63605.1| pseudo-response regulator [Triticum durum]
gi|379025658|dbj|BAL63606.1| pseudo-response regulator [Triticum durum]
gi|379025660|dbj|BAL63607.1| pseudo-response regulator [Triticum durum]
gi|379025662|dbj|BAL63608.1| pseudo-response regulator [Triticum durum]
gi|379025664|dbj|BAL63609.1| pseudo-response regulator [Triticum durum]
gi|379025666|dbj|BAL63610.1| pseudo-response regulator [Triticum durum]
gi|379025668|dbj|BAL63611.1| pseudo-response regulator [Triticum durum]
gi|379025670|dbj|BAL63612.1| pseudo-response regulator [Triticum durum]
gi|379025672|dbj|BAL63613.1| pseudo-response regulator [Triticum durum]
gi|379025674|dbj|BAL63614.1| pseudo-response regulator [Triticum durum]
gi|379025676|dbj|BAL63615.1| pseudo-response regulator [Triticum durum]
gi|379025678|dbj|BAL63616.1| pseudo-response regulator [Triticum durum]
gi|379025680|dbj|BAL63617.1| pseudo-response regulator [Triticum durum]
gi|379025684|dbj|BAL63619.1| pseudo-response regulator [Triticum durum]
gi|379025686|dbj|BAL63620.1| pseudo-response regulator [Triticum durum]
gi|379025688|dbj|BAL63621.1| pseudo-response regulator [Triticum durum]
gi|379025690|dbj|BAL63622.1| pseudo-response regulator [Triticum durum]
gi|379025692|dbj|BAL63623.1| pseudo-response regulator [Triticum durum]
gi|379025694|dbj|BAL63624.1| pseudo-response regulator [Triticum durum]
gi|379025696|dbj|BAL63625.1| pseudo-response regulator [Triticum durum]
gi|379026082|dbj|BAL63818.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA ++L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAAEFLAKPIRKNELKNLWAHV 157
Query: 147 VRK 149
R+
Sbjct: 158 WRR 160
>gi|357632197|ref|ZP_09130075.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio sp. FW1012B]
gi|357580751|gb|EHJ46084.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio sp. FW1012B]
Length = 453
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+L VDDD L +LE L Y+V T A AL++L +R +V+SD+ MP MDG
Sbjct: 11 ILAVDDDPHILEVLEVRLVSAGYDVVTAGDGAEALEVLAKRP--VKLVISDIRMPGMDGM 68
Query: 96 KLLEHIGLE-MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEEL 139
+LLE + + LP+I G + + I+HGA DYL KP +EL
Sbjct: 69 RLLEEMERRGIRLPIIFLTAHGSIPGAVEAIKHGAVDYLTKPFDGQEL 116
>gi|379025846|dbj|BAL63700.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025848|dbj|BAL63701.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQFIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 147 VRK 149
R+
Sbjct: 155 WRR 157
>gi|242093738|ref|XP_002437359.1| hypothetical protein SORBIDRAFT_10g025510 [Sorghum bicolor]
gi|241915582|gb|EER88726.1| hypothetical protein SORBIDRAFT_10g025510 [Sorghum bicolor]
Length = 111
Score = 73.2 bits (178), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/88 (45%), Positives = 60/88 (68%), Gaps = 6/88 (6%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLY-NVTTCSQAAVALDILRERKGC---FDVVL 84
+F AGLR+L VD+D L +L+++L+ C Y NVT + + ALD+LRERK FD+V+
Sbjct: 5 RFRAGLRMLTVDEDRVNLVVLKRVLKVCDYNNVTIVADVSTALDMLRERKDGDDQFDLVI 64
Query: 85 SDVHMPD--MDGFKLLEHIGLEMDLPVI 110
SD +P+ ++ K LE + +EMD+PVI
Sbjct: 65 SDFFIPNNGINSLKFLELVAVEMDIPVI 92
>gi|395759127|dbj|BAM31260.1| pseudo-response regulator [Triticum aestivum]
Length = 469
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 32 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 91
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 92 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 151
Query: 147 VRK 149
R+
Sbjct: 152 WRR 154
>gi|403374229|gb|EJY87054.1| Protein kinase domain containing protein [Oxytricha trifallax]
Length = 834
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 12/120 (10%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+L+ +D+ L +L C Y VTT AL LR+ FD+VL D++MP+MDGF
Sbjct: 9 ILLAEDEQFQRLALYDILELCDYEVTTVENGKKALVELRDETREFDLVLLDLYMPEMDGF 68
Query: 96 KLL------EHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
+LL E + L LPV+ DG + +R GA DYL+KP+R +E K + +H+
Sbjct: 69 ELLTLMQEDEKLSL---LPVVVMSADGDKDIIANCLRMGAKDYLVKPVRFQECKGLVRHM 125
>gi|2894611|emb|CAA17145.1| putative protein [Arabidopsis thaliana]
gi|7268554|emb|CAB78804.1| putative protein [Arabidopsis thaliana]
Length = 483
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 41/52 (78%)
Query: 215 TKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 266
T + +V W+ ELH++FV AV QLG+D+A+P RILELM V LTR NVASHLQ
Sbjct: 294 TSRKKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVASHLQ 345
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 12/143 (8%)
Query: 21 AADVAVPDQFPAGLRVLVV------DDDITCLRILEQMLRRCLYNVTTCSQAAVALDILR 74
A D++ + FP GL+VL++ D D + L Y VTT + AL +
Sbjct: 5 ANDLSKWENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVV 64
Query: 75 ERKGCFDVVLSDVHM-PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYL 130
+ F + + +V+M + + FK LE + LP I TD ++ M+ I GA ++L
Sbjct: 65 KNPESFHIAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCITTTMKCIALGAVEFL 122
Query: 131 IKPIREEELKNIWQHVVRKRWNE 153
KP+ E+LKNIWQHVV K +N+
Sbjct: 123 QKPLSPEKLKNIWQHVVHKAFND 145
>gi|117619500|ref|YP_858484.1| transcriptional regulatory protein ZraR [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117560907|gb|ABK37855.1| transcriptional regulatory protein ZraR [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 426
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+VDDD + L+++ LR Y V T A ALD LR+++ D+VLSD+ M MDG
Sbjct: 3 RILLVDDDASLLKLMSMRLRSQGYEVDTADSAEGALDRLRQQRA--DLVLSDLRMAGMDG 60
Query: 95 FKLLEHIGLE-MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
L E I + + LPVI G + ++ R G +L KPI ++EL +H +
Sbjct: 61 LALFERIQSQWLGLPVIIMTAHGTIPDAIQATRSGVFSFLTKPIDKDELFATIEHAL 117
>gi|224126555|ref|XP_002329583.1| predicted protein [Populus trichocarpa]
gi|222870292|gb|EEF07423.1| predicted protein [Populus trichocarpa]
Length = 549
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 44/57 (77%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQK 272
KK +V W+ ELH++FV V +LG+D+A+P R+LELM V LTR NVASHLQ+ +++
Sbjct: 308 KKMKVDWTPELHKKFVQVVEKLGVDQAIPSRVLELMKVESLTRHNVASHLQKYRMRR 364
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 7/134 (5%)
Query: 23 DVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDV 82
D++ FP GL VL++D+D + ++ L Y V T AL + G F V
Sbjct: 7 DLSAWKDFPKGLSVLLLDEDNSSAAEIKSKLEALDYIVYTFCNENEALLAISNEPGSFHV 66
Query: 83 VLSDVHMPDMDG-FKLLEHIGLEMDLPVITDGRV---SAVMRGIRHGACDYLIKPIREEE 138
+ +V + +G FK LE DLP I + + +M+ I GA ++L KP+ E++
Sbjct: 67 AIVEVSTSNSNGSFKFLE---TAKDLPTIMTSNIHCLNTMMKCIALGAVEFLRKPLSEDK 123
Query: 139 LKNIWQHVVRKRWN 152
L+NIWQHVV K +N
Sbjct: 124 LRNIWQHVVHKAFN 137
>gi|357127777|ref|XP_003565554.1| PREDICTED: probable transcription factor GLK2-like [Brachypodium
distachyon]
Length = 522
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 47/66 (71%), Gaps = 6/66 (9%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELM-NVPGLTRENVASHLQEINLQKFR 274
+K +V W+ ELH++FV AV QLGIDKAVP RILELM N LTR N+ASH LQK+R
Sbjct: 210 RKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGNEYSLTRHNIASH-----LQKYR 264
Query: 275 LYLKRL 280
+ K L
Sbjct: 265 SHRKHL 270
>gi|356499709|ref|XP_003518679.1| PREDICTED: uncharacterized protein LOC100799501 [Glycine max]
Length = 371
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 66/130 (50%), Gaps = 21/130 (16%)
Query: 196 RISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVP 254
R+ +K+E+ G+ + +K R WS ELH++F+ A+ QLG D A PK+I ELM V
Sbjct: 197 RVDSKKEEKGDAQ-------RKQRRCWSQELHKRFLHALQQLGGADSATPKQIRELMKVD 249
Query: 255 GLTRENVASHLQEINLQKFRLYLKR----LNGVSQQGG----ITNSFCAPIETNVKLGSL 306
GLT + V SH LQKFRL+ +R N S Q G + N F P E S
Sbjct: 250 GLTNDEVKSH-----LQKFRLHTRRSPIIHNSASSQAGSLFLVGNIFVQPPEYATSSASG 304
Query: 307 GRFDIQALAA 316
G AA
Sbjct: 305 GELTTATPAA 314
>gi|456359250|dbj|BAM93454.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359252|dbj|BAM93455.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359254|dbj|BAM93456.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359256|dbj|BAM93457.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359258|dbj|BAM93458.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
Length = 331
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 36 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 95
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 96 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 155
Query: 147 VRK 149
R+
Sbjct: 156 WRR 158
>gi|146428|gb|AAA24004.1| hydG protein [Escherichia coli]
Length = 437
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 6/113 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPIREEELKNIWQ 144
L+ I L +PV+ S+V + ++ GA DYLIKP+ + L+ W+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATWK 118
>gi|224144770|ref|XP_002325408.1| predicted protein [Populus trichocarpa]
gi|222862283|gb|EEE99789.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH++F+ AVNQLG DKA PK +++LM +PGLT ++ SHLQ+ L
Sbjct: 42 STDAKPRLKWTTDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS 101
Query: 272 K 272
K
Sbjct: 102 K 102
>gi|224122790|ref|XP_002330480.1| predicted protein [Populus trichocarpa]
gi|222871892|gb|EEF09023.1| predicted protein [Populus trichocarpa]
Length = 423
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELH++F+ AVN+L G +KA PK +L+LMNV GLT +V SHLQ+ L
Sbjct: 198 STAHKPRMRWTTELHERFLDAVNKLDGAEKATPKGVLKLMNVEGLTIYHVKSHLQKYRLA 257
Query: 272 KF 273
K+
Sbjct: 258 KY 259
>gi|147807228|emb|CAN70741.1| hypothetical protein VITISV_022754 [Vitis vinifera]
Length = 165
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 14/118 (11%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
RVL+V++D + ++ +LR C Y VT S A IL++ D+VL++V++P +
Sbjct: 59 RVLLVENDDSTRYVIGALLRNCGYQVTETSNGLQAWRILKDASNHIDLVLTEVNLPRLSV 118
Query: 95 FKLLEHIGLEMDLPVITDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWN 152
TD + V++ + GA D+L+KPIR+ ELK +WQH+ R+R N
Sbjct: 119 MS--------------TDDSGALVLKCLSKGATDFLVKPIRKNELKFLWQHIWRRRQN 162
>gi|357133214|ref|XP_003568222.1| PREDICTED: uncharacterized protein LOC100842130 [Brachypodium
distachyon]
Length = 406
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELHQ+FV AVNQL G +KA PK ++ LM +PGLT ++ SHLQ+ L
Sbjct: 39 STDAKPRLKWTPELHQRFVDAVNQLGGAEKATPKTVMRLMGIPGLTLYHLKSHLQKYRLS 98
Query: 272 K 272
K
Sbjct: 99 K 99
>gi|407940621|ref|YP_006856262.1| CheA signal transduction histidine kinase [Acidovorax sp. KKS102]
gi|407898415|gb|AFU47624.1| CheA signal transduction histidine kinase [Acidovorax sp. KKS102]
Length = 2088
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 68/125 (54%), Gaps = 11/125 (8%)
Query: 27 PDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSD 86
P Q P VLVVDD IT R+ +++L+R Y V + AL+ L+E + VVLSD
Sbjct: 1959 PSQVPL---VLVVDDSITVRRVTQRLLQREGYRVALAADGLQALERLQEERPT--VVLSD 2013
Query: 87 VHMPDMDGFKLLEHI---GLEMDLPVI-TDGRVSAVMR--GIRHGACDYLIKPIREEELK 140
+ MP MDGF L +I G DLP+I R++ R + G YL KP +EEL
Sbjct: 2014 IEMPRMDGFDLARNIRADGALRDLPIIMITSRIAEKHREHAMELGVNHYLGKPYSDEELL 2073
Query: 141 NIWQH 145
++ QH
Sbjct: 2074 SLIQH 2078
>gi|255562888|ref|XP_002522449.1| transcription factor, putative [Ricinus communis]
gi|223538334|gb|EEF39941.1| transcription factor, putative [Ricinus communis]
Length = 361
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELHQ+FV AVNQL G DKA PK ++ +M +PGLT ++ SHLQ+ L
Sbjct: 16 STDAKPRLKWTPELHQRFVEAVNQLGGADKATPKSLMRVMGIPGLTLYHLKSHLQKYRLG 75
Query: 272 KFRL 275
K +L
Sbjct: 76 KSQL 79
>gi|197122377|ref|YP_002134328.1| Fis family transcriptional regulator [Anaeromyxobacter sp. K]
gi|220917159|ref|YP_002492463.1| two component sigma-54 specific Fis family transcriptional
regulator [Anaeromyxobacter dehalogenans 2CP-1]
gi|196172226|gb|ACG73199.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Anaeromyxobacter sp. K]
gi|219955013|gb|ACL65397.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Anaeromyxobacter dehalogenans 2CP-1]
Length = 473
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
VL+VDD++ R+L ML+R Y VTT + AL +L + VV++D+ MP + G
Sbjct: 4 VLIVDDEVNIRRVLAAMLKREGYEVTTAADGEQALGVL--HRTPVHVVVTDLVMPRVGGM 61
Query: 96 KLLEHIGLEM-DLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 148
+LL + + D+PVI G V + + ++ GA DY+ KP +EELK + R
Sbjct: 62 ELLRRVSQDFPDVPVILITAHGSVDSAVAALKAGAFDYITKPFEQEELKKVIAKAAR 118
>gi|115464573|ref|NP_001055886.1| Os05g0488600 [Oryza sativa Japonica Group]
gi|113579437|dbj|BAF17800.1| Os05g0488600 [Oryza sativa Japonica Group]
gi|125552789|gb|EAY98498.1| hypothetical protein OsI_20411 [Oryza sativa Indica Group]
Length = 392
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 7/82 (8%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELHQ+FV AVNQL G +KA PK ++ LM +PGLT ++ SH LQ
Sbjct: 21 STDAKPRLKWTPELHQRFVDAVNQLGGAEKATPKTVMRLMGIPGLTLYHLKSH-----LQ 75
Query: 272 KFRLYLKRLNGVSQQGGITNSF 293
K+RL K L G + G N+
Sbjct: 76 KYRLS-KNLQGQANVGTTKNAL 96
>gi|326491891|dbj|BAJ98170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 349
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELH +FV AVNQLG DKA PK I+ LM VPGLT ++ SHLQ+ L
Sbjct: 43 STDAKPRLKWTPELHDRFVEAVNQLGGPDKATPKTIMRLMGVPGLTLYHLKSHLQKYRLS 102
Query: 272 K 272
K
Sbjct: 103 K 103
>gi|242090907|ref|XP_002441286.1| hypothetical protein SORBIDRAFT_09g023830 [Sorghum bicolor]
gi|241946571|gb|EES19716.1| hypothetical protein SORBIDRAFT_09g023830 [Sorghum bicolor]
Length = 393
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELHQ+FV AVNQL G +KA PK ++ LM +PGLT ++ SHLQ+ L
Sbjct: 21 STDAKPRLKWTPELHQRFVDAVNQLGGAEKATPKTVMRLMGIPGLTLYHLKSHLQKYRLS 80
Query: 272 K 272
K
Sbjct: 81 K 81
>gi|413945796|gb|AFW78445.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 414
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELHQ+FV AVNQL G +KA PK ++ LM +PGLT ++ SHLQ+ L
Sbjct: 40 STDAKPRLKWTPELHQRFVDAVNQLGGAEKATPKTVMRLMGIPGLTLYHLKSHLQKYRLS 99
Query: 272 K 272
K
Sbjct: 100 K 100
>gi|359952798|gb|AEV91189.1| MYB-related protein [Triticum aestivum]
Length = 394
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 70/149 (46%), Gaps = 14/149 (9%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELM-NVPGLTRENVASHLQEINLQKFR 274
+K +V W+ ELH++FV AV QLG+DKAVP RILELM N LTR N+ASHLQ+ +
Sbjct: 93 RKVKVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASHLQKYRSHRKH 152
Query: 275 LYLKRLNGVS--QQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQTLAALHA-- 330
L + S Q+ + + P + G G +PP A H
Sbjct: 153 LMAREAEAASWTQKRQMYAAAGGPRKDAAAGGGPWVVPTVGFPPPGAMPPHAGMAHHPGQ 212
Query: 331 --------ELLGRPTG-NLVTAVDQPALL 350
+ G PTG + + P++L
Sbjct: 213 PPPFCRPLHVWGHPTGVDATLPLSPPSML 241
>gi|74316103|ref|YP_313843.1| response regulator receiver modulated PAS/PAC sensor-containing
diguanylate cyclase/phosphodiesterase [Thiobacillus
denitrificans ATCC 25259]
gi|74055598|gb|AAZ96038.1| Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL
domains) with PAS/PAC sensor(s) and Response Regulator
Receiver modulation [Thiobacillus denitrificans ATCC
25259]
Length = 738
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 73/133 (54%), Gaps = 7/133 (5%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FPA R+LVVDD+I L + ++L Y+VTT + AL + +++ FDV+L D+ M
Sbjct: 25 FPARPRILVVDDEILILEGMRRLLAARDYDVTTANGGCEALIAIGKQQ--FDVILLDLGM 82
Query: 90 PDMDGFKLLEHIG-LEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEE-LKNIWQ 144
PD+ G ++L + D PVI D + A +R +R GA D++ KP EE L+ +
Sbjct: 83 PDLSGAEVLRFVADRSADTPVIVVSGDSTIDAAIRALRGGAADFVRKPYEPEELLRRVDN 142
Query: 145 HVVRKRWNENKEH 157
+ R+R H
Sbjct: 143 TLTRRRLERENNH 155
>gi|222632043|gb|EEE64175.1| hypothetical protein OsJ_19007 [Oryza sativa Japonica Group]
Length = 411
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELHQ+FV AVNQL G +KA PK ++ LM +PGLT ++ SHLQ+ L
Sbjct: 40 STDAKPRLKWTPELHQRFVDAVNQLGGAEKATPKTVMRLMGIPGLTLYHLKSHLQKYRLS 99
Query: 272 K 272
K
Sbjct: 100 K 100
>gi|242052757|ref|XP_002455524.1| hypothetical protein SORBIDRAFT_03g012625 [Sorghum bicolor]
gi|241927499|gb|EES00644.1| hypothetical protein SORBIDRAFT_03g012625 [Sorghum bicolor]
Length = 244
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 10/95 (10%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMN----VPGLTRENVASHLQEINLQ 271
K+PR+VW+ ELH FV A + LG D+AVP+RILE MN VP ++RE VASH LQ
Sbjct: 77 KRPRLVWTDELHDLFVKAYDSLG-DEAVPRRILEKMNEKMNVPEVSREKVASH-----LQ 130
Query: 272 KFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSL 306
K +L+L+RL + + + AP + L SL
Sbjct: 131 KHKLHLRRLAEEAASSHSSPTEEAPAAPSHPLRSL 165
>gi|427726024|ref|YP_007073301.1| winged helix family two component transcriptional regulator
[Leptolyngbya sp. PCC 7376]
gi|427357744|gb|AFY40467.1| two component transcriptional regulator, winged helix family
[Leptolyngbya sp. PCC 7376]
Length = 244
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 7/132 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL-RERKGCFDVVLSDVHMPDMDG 94
+LVVDD+I RIL L Y++ T + AL++ RER D+V+ DV MP DG
Sbjct: 8 ILVVDDEIAVRRILNTRLSMIGYDIITAADGDEALEVFWRERP---DLVILDVMMPKRDG 64
Query: 95 FKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRW 151
+ + + I E D P+I G V+ + G+R GA DYL+KP +EL+ ++R+
Sbjct: 65 YYVCQEIRRESDTPIIMLTALGDVADRITGLRFGADDYLVKPFSPKELEARIHCILRRTK 124
Query: 152 NENKEHENSGSL 163
+ E E +G L
Sbjct: 125 KQQNEVEEAGVL 136
>gi|357112417|ref|XP_003558005.1| PREDICTED: uncharacterized protein LOC100837299 [Brachypodium
distachyon]
Length = 350
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELH +FV AVNQLG DKA PK I+ LM VPGLT ++ SHLQ+ L
Sbjct: 43 STDAKPRLKWTPELHDRFVEAVNQLGGPDKATPKTIMRLMGVPGLTLYHLKSHLQKYRLS 102
Query: 272 K 272
K
Sbjct: 103 K 103
>gi|255568946|ref|XP_002525443.1| transcription factor, putative [Ricinus communis]
gi|223535256|gb|EEF36933.1| transcription factor, putative [Ricinus communis]
Length = 419
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH+ F+ AVNQLG DKA PK +++LM +PGLT ++ SHLQ+ L
Sbjct: 42 STDAKPRLKWTSDLHEHFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS 101
Query: 272 K 272
K
Sbjct: 102 K 102
>gi|357487065|ref|XP_003613820.1| Myb family transcription factor APL [Medicago truncatula]
gi|355515155|gb|AES96778.1| Myb family transcription factor APL [Medicago truncatula]
Length = 353
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELHQ+F+ A+NQL G DKA PK I+ +M +PGLT ++ SHLQ+ L
Sbjct: 11 STDAKPRLKWTPELHQRFIDAINQLGGADKATPKSIMRVMEIPGLTLYHLKSHLQKYRLG 70
Query: 272 K 272
K
Sbjct: 71 K 71
>gi|410632594|ref|ZP_11343249.1| transcriptional regulatory protein zraR [Glaciecola arctica
BSs20135]
gi|410147831|dbj|GAC20116.1| transcriptional regulatory protein zraR [Glaciecola arctica
BSs20135]
Length = 448
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 65/116 (56%), Gaps = 6/116 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
VL+VDDD + LR++ L+ YNV + S AL ++ + FDVVLSD+ MP +DG
Sbjct: 11 VLLVDDDESLLRLMAIRLKGEGYNVQSASGGKEALKLINTQN--FDVVLSDLRMPGLDGL 68
Query: 96 KLLEHI-GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
L E I GL D+PVI G + + + G +L KPI +EL+++ + V
Sbjct: 69 SLFEEIMGLRKDVPVILMTAHGTIQDAVEATQRGVFGFLTKPIDHDELRSLMKKAV 124
>gi|413949697|gb|AFW82346.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 393
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELHQ+FV AVNQL G +KA PK ++ LM +PGLT ++ SHLQ+ L
Sbjct: 21 STDAKPRLKWTPELHQRFVDAVNQLGGEEKATPKTVMRLMGIPGLTLYHLKSHLQKYRLS 80
Query: 272 K 272
K
Sbjct: 81 K 81
>gi|381187060|ref|ZP_09894625.1| transcriptional regulatory protein zraR [Flavobacterium frigoris
PS1]
gi|379650670|gb|EIA09240.1| transcriptional regulatory protein zraR [Flavobacterium frigoris
PS1]
Length = 442
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 65/109 (59%), Gaps = 6/109 (5%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++L+++DDI+ ++LE+ L + Y VTT AA A + L+ FD+VL+D+ +PD DG
Sbjct: 3 KILLIEDDISFCKLLEKFLIKNAYTVTTSFSAAEARNALKAE--IFDLVLTDLRLPDEDG 60
Query: 95 FKLLEHIGLEM-DLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEEL 139
L+ I + PVI V+ ++ I++GA DY+ KPI +E+
Sbjct: 61 ISLMAEIKVAFPQTPVILMTGYADVNTAVKAIKNGASDYISKPINPDEV 109
>gi|225441648|ref|XP_002282336.1| PREDICTED: uncharacterized protein LOC100248614 isoform 2 [Vitis
vinifera]
Length = 412
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH++F+ AVNQLG DKA PK +++LM +PGLT ++ SHLQ+ L
Sbjct: 42 STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS 101
Query: 272 K 272
K
Sbjct: 102 K 102
>gi|449446770|ref|XP_004141144.1| PREDICTED: uncharacterized protein LOC101206445 [Cucumis sativus]
gi|449489519|ref|XP_004158336.1| PREDICTED: uncharacterized protein LOC101225289 [Cucumis sativus]
Length = 390
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 53/80 (66%), Gaps = 7/80 (8%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH +FV AVNQLG DKA PK ++++M +PGLT ++ SH LQ
Sbjct: 36 STDAKPRLKWTPDLHDRFVEAVNQLGGADKATPKTVMKIMGIPGLTLYHLKSH-----LQ 90
Query: 272 KFRLYLKRLNGVSQQGGITN 291
K+RL K L+G + G TN
Sbjct: 91 KYRLS-KNLHGQANGGSGTN 109
>gi|357116008|ref|XP_003559777.1| PREDICTED: uncharacterized protein LOC100824544 [Brachypodium
distachyon]
Length = 338
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELH++FV AVNQL G DKA PK I+ +M +PGLT ++ SHLQ+ L
Sbjct: 60 STDAKPRLKWTSELHERFVEAVNQLGGPDKATPKTIMRVMGIPGLTLYHLKSHLQKFRLG 119
Query: 272 K 272
K
Sbjct: 120 K 120
>gi|328875568|gb|EGG23932.1| cAMP phosphodiesterase [Dictyostelium fasciculatum]
Length = 851
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P+ + +LVVDDD +ILE L++ YNVT + A +IL +D+VL+DV MP
Sbjct: 178 PSKVHILVVDDDQVQRKILESALKKFKYNVTVVTNGEEAWNILINGNTKYDLVLTDVMMP 237
Query: 91 DMDGFKLLEHIGLEMDL---PVI----TDGRVSAVMRGIRHGACDYLIKPIREEELK 140
++ GF LL+ I ++ PVI T I+ G D+L KPI +E LK
Sbjct: 238 NISGFDLLQRINDHAEIKNVPVILMSGTAIDYKYANDTIKIGGQDFLTKPIAKELLK 294
>gi|301118478|ref|XP_002906967.1| protein kinase, putative [Phytophthora infestans T30-4]
gi|262108316|gb|EEY66368.1| protein kinase, putative [Phytophthora infestans T30-4]
Length = 897
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 19/174 (10%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P+ + VLVV+DD +L+ C Y V ALD+L FD+VL DV +P
Sbjct: 3 PSEVTVLVVEDDEFTRMATIDILKSCRYTVFAVENGQQALDLLVTNHAKFDLVLCDVMLP 62
Query: 91 DMDGFKLLE----HIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIW 143
M G +LL+ H +P++ ++ + V + GA DYLIKPI+ K +
Sbjct: 63 VMTGIELLDEIQKHSATLGHIPIVMTSSNEEMDVVTSCLSKGAKDYLIKPIQVNTAKTLV 122
Query: 144 QHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRI 197
+HV W + LE T + D IE ++ +GT GT R+++
Sbjct: 123 RHV----WLSRR-------LERTSNKSMWQD-IEVIRTIGKGTHGTVVLARRKV 164
>gi|293332904|ref|NP_001170326.1| uncharacterized protein LOC100384296 [Zea mays]
gi|224035101|gb|ACN36626.1| unknown [Zea mays]
Length = 367
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELH++FV AV+QLG DKA PK I+ LM +PGLT ++ SHLQ+ L
Sbjct: 46 STDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSHLQKYRLS 105
Query: 272 K 272
K
Sbjct: 106 K 106
>gi|209527854|ref|ZP_03276344.1| two component transcriptional regulator, winged helix family
[Arthrospira maxima CS-328]
gi|376006010|ref|ZP_09783358.1| Two component transcriptional regulator, winged helix family
[Arthrospira sp. PCC 8005]
gi|423064997|ref|ZP_17053787.1| two component transcriptional regulator winged helix family
[Arthrospira platensis C1]
gi|209491711|gb|EDZ92076.1| two component transcriptional regulator, winged helix family
[Arthrospira maxima CS-328]
gi|375325627|emb|CCE19111.1| Two component transcriptional regulator, winged helix family
[Arthrospira sp. PCC 8005]
gi|406714240|gb|EKD09408.1| two component transcriptional regulator winged helix family
[Arthrospira platensis C1]
Length = 243
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 5/118 (4%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+LVVDD+ + RILE L Y+V T + AL+I R+ + D+V+ DV MP +DG
Sbjct: 7 RILVVDDEASIRRILETRLSMIGYDVVTAADGEEALEIFRQTEP--DLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
+ + + + E D+P+I G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|399018558|ref|ZP_10720733.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Herbaspirillum sp. CF444]
gi|398101060|gb|EJL91287.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Herbaspirillum sp. CF444]
Length = 145
Score = 71.6 bits (174), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/128 (34%), Positives = 71/128 (55%), Gaps = 10/128 (7%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
+F + LR++VVDD IT L+ L +L + ++ T CS AL +LRE G FD++L+D+
Sbjct: 3 EFVSSLRIMVVDDQITHLKALCDILGQHDFDATGCSTGEAALALLRE--GSFDLLLTDLV 60
Query: 89 MPDMDGFKLLEHIGLEMDLPVIT------DGRVSAVMRGIRHGACDYLIKPIREEELKNI 142
MP + G L+E +D P I +G V ++ ++ GA DY+IKP + L +
Sbjct: 61 MPGIGGLALIE-AARALD-PCIACIIMTGEGTVDTAVKAMKIGALDYIIKPFKAATLLPV 118
Query: 143 WQHVVRKR 150
+ + R
Sbjct: 119 LKRAIEFR 126
>gi|225441650|ref|XP_002282324.1| PREDICTED: uncharacterized protein LOC100248614 isoform 1 [Vitis
vinifera]
Length = 418
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH++F+ AVNQLG DKA PK +++LM +PGLT ++ SHLQ+ L
Sbjct: 42 STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS 101
Query: 272 K 272
K
Sbjct: 102 K 102
>gi|414888158|tpg|DAA64172.1| TPA: putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELH++FV AV+QLG DKA PK I+ LM +PGLT ++ SHLQ+ L
Sbjct: 46 STDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSHLQKYRLS 105
Query: 272 K 272
K
Sbjct: 106 K 106
>gi|379025904|dbj|BAL63729.1| pseudo-response regulator [Triticum turanicum]
gi|379025906|dbj|BAL63730.1| pseudo-response regulator [Triticum turanicum]
gi|379025908|dbj|BAL63731.1| pseudo-response regulator [Triticum polonicum]
Length = 665
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y A L++ + D+VL++V M +
Sbjct: 35 IRVLLVETDDSTRQVVTALLRHCMYQGLPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 94
Query: 93 DGFKLLEHI---GLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI+ + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 95 SGIDLLGRIMNHEVCKDIPVISMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 154
Query: 147 VRK 149
R+
Sbjct: 155 WRR 157
>gi|67921096|ref|ZP_00514615.1| Response regulator receiver:Transcriptional regulatory protein,
C-terminal [Crocosphaera watsonii WH 8501]
gi|416381162|ref|ZP_11684168.1| two-component response regulator [Crocosphaera watsonii WH 0003]
gi|67857213|gb|EAM52453.1| Response regulator receiver:Transcriptional regulatory protein,
C-terminal [Crocosphaera watsonii WH 8501]
gi|357265562|gb|EHJ14311.1| two-component response regulator [Crocosphaera watsonii WH 0003]
Length = 243
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + ALDI E D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDIFHE--AIPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
+ + + + E D+P+I G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|326490253|dbj|BAJ84790.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520748|dbj|BAJ92737.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 506
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 47/66 (71%), Gaps = 6/66 (9%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELM-NVPGLTRENVASHLQEINLQKFR 274
+K +V W+ ELH++FV AV QLG+DKAVP RILELM N LTR N+ASH LQK+R
Sbjct: 201 RKVKVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASH-----LQKYR 255
Query: 275 LYLKRL 280
+ K L
Sbjct: 256 SHRKHL 261
>gi|348665892|gb|EGZ05720.1| hypothetical protein PHYSODRAFT_551172 [Phytophthora sojae]
Length = 897
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 19/174 (10%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P+ + VLVV+DD +L+ C Y V ALD+L FD+VL DV +P
Sbjct: 3 PSEVTVLVVEDDEFTRMATIDILKSCRYTVFAVENGQQALDVLVANHAKFDLVLCDVMLP 62
Query: 91 DMDGFKLLE----HIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIW 143
M G +LL+ H +P++ ++ + V + GA DYLIKPI+ K +
Sbjct: 63 VMTGIELLDQIQKHSATLGHIPIVMTSSNEEMDVVTSCLSKGAKDYLIKPIQVNTAKTLV 122
Query: 144 QHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRI 197
+HV W + LE T + D IE ++ +GT GT R+++
Sbjct: 123 RHV----WLSRR-------LERTSNKSMWQD-IEVIRTIGKGTHGTVVLARRKL 164
>gi|318041885|ref|ZP_07973841.1| two-component response regulator [Synechococcus sp. CB0101]
Length = 254
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 72/122 (59%), Gaps = 5/122 (4%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P GL++LV DD+ RILE L + V S A AL++ R + D+V+ DV MP
Sbjct: 10 PEGLKILVADDEANIRRILETRLTMQGHEVLMASNGAEALELFRGSEP--DLVVLDVMMP 67
Query: 91 DMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
++DGF ++E I + ++P+I G V+ + G++ GA DY++KP +EL+ + V+
Sbjct: 68 ELDGFAVVERIRAQSEVPIILLTALGDVADRITGLQLGADDYMVKPFSPKELEARIRCVM 127
Query: 148 RK 149
R+
Sbjct: 128 RR 129
>gi|172038915|ref|YP_001805416.1| two-component response regulator [Cyanothece sp. ATCC 51142]
gi|354552794|ref|ZP_08972102.1| two component transcriptional regulator, winged helix family
[Cyanothece sp. ATCC 51472]
gi|171700369|gb|ACB53350.1| two-component response regulator [Cyanothece sp. ATCC 51142]
gi|353556116|gb|EHC25504.1| two component transcriptional regulator, winged helix family
[Cyanothece sp. ATCC 51472]
Length = 243
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + ALDI E D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDIFHE--AVPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
+ + + + E D+P+I G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|42565471|gb|AAS21003.1| cytokinin response regulator 1 protein [Hyacinthus orientalis]
Length = 254
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 10/95 (10%)
Query: 196 RISAKEEDDGELESDDPS--TTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNV 253
R+ E ++ E DD S + K+PR+VW+ +LH + ++ V LGI AVPK I++L
Sbjct: 120 RVRRSEAENSE---DDQSARSLKRPRLVWTPQLHTRLLTWVAHLGIKTAVPKTIMQLRMS 176
Query: 254 PGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGG 288
GLTRENVASH LQK+RLY + G + G
Sbjct: 177 RGLTRENVASH-----LQKYRLYFEEDAGRCRTNG 206
>gi|90580619|ref|ZP_01236424.1| hypothetical sensory box sensor histidine kinase/response regulator
[Photobacterium angustum S14]
gi|90438277|gb|EAS63463.1| hypothetical sensory box sensor histidine kinase/response regulator
[Photobacterium angustum S14]
Length = 1114
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 10/152 (6%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P G +LVVDD+ L+IL LR Y V T ALDI+++++ D++L D+ MP
Sbjct: 702 PEGDLILVVDDEPVNLQILNNFLRLAGYRVKTAESGHQALDIVQQQRP--DLILLDIMMP 759
Query: 91 DMDGFK---LLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
+M G++ LL +LP++ G++ ++G GA DYL KP +EEL Q
Sbjct: 760 EMSGYEVCTLLRKQYSIFELPIMMLSALGQIQDRIKGFECGANDYLTKPFNKEELIARIQ 819
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEI 176
++ E+++ +N +E H+R EI
Sbjct: 820 AYLQASKTEHEKQKNQSLQQEI--HRREQVEI 849
>gi|224125896|ref|XP_002319702.1| predicted protein [Populus trichocarpa]
gi|222858078|gb|EEE95625.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH++F+ AVNQLG DKA PK +++LM +PGLT ++ SHLQ+ L
Sbjct: 42 STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS 101
Query: 272 K 272
K
Sbjct: 102 K 102
>gi|365102038|ref|ZP_09332576.1| transcriptional regulatory protein zraR [Citrobacter freundii
4_7_47CFAA]
gi|363646537|gb|EHL85779.1| transcriptional regulatory protein zraR [Citrobacter freundii
4_7_47CFAA]
Length = 441
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 65/116 (56%), Gaps = 6/116 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR Y V AL+++RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYEVALAYSGRAALELVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPIREEELKNIWQHVV 147
L+ I L +PV+ S+V + ++ GA DYLIKP+ + L+ + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAFSSVETAVEALKTGALDYLIKPLDFDRLQETLEKAL 121
>gi|297739741|emb|CBI29923.3| unnamed protein product [Vitis vinifera]
Length = 305
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH++F+ AVNQLG DKA PK +++LM +PGLT ++ SHLQ+ L
Sbjct: 42 STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS 101
Query: 272 K 272
K
Sbjct: 102 K 102
>gi|254478010|ref|ZP_05091394.1| response regulator receiver domain protein [Carboxydibrachium
pacificum DSM 12653]
gi|214036014|gb|EEB76704.1| response regulator receiver domain protein [Carboxydibrachium
pacificum DSM 12653]
Length = 267
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 90/172 (52%), Gaps = 10/172 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDD + +++ +L YNV + + A+ ++ RK FD+++ D+++PD +GF
Sbjct: 10 ILVVDDSVLVRLMVKDILGGEGYNVVAAATSEEAVRKIKSRKELFDLIIVDINLPDQNGF 69
Query: 96 KLLEHIGLE---MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
+ + ++ E +PVI D V ++ R + GA DYL+KP + EEL + ++
Sbjct: 70 EFIRNLKSEEKYKHIPVIILSIDATVPSIKRAVEAGAVDYLVKPFKAEELVKRVEKLIGS 129
Query: 150 RWNENKEHENSGSL-EETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAK 200
E++ E L +E + +RG++ + S V EG Q +I+ K
Sbjct: 130 VKKEDRYPELKDLLKKEVNRARRGNENL---SLVLAHCEGKIAGQISKIAEK 178
>gi|126658619|ref|ZP_01729765.1| two-component response regulator [Cyanothece sp. CCY0110]
gi|126620056|gb|EAZ90779.1| two-component response regulator [Cyanothece sp. CCY0110]
Length = 243
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + ALDI E D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDIFHE--AIPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
+ + + + E D+P+I G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|312282595|dbj|BAJ34163.1| unnamed protein product [Thellungiella halophila]
Length = 393
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLGI-DKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH++FV AVNQLG DKA PK I+++M +PGLT ++ SH LQ
Sbjct: 41 STDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSH-----LQ 95
Query: 272 KFRLYLKRLNGVSQQGGITNSFCAPIETNV 301
K+RL K LNG + S +E N
Sbjct: 96 KYRLS-KNLNGQANSSLNKTSVMTMVEENT 124
>gi|242051326|ref|XP_002463407.1| hypothetical protein SORBIDRAFT_02g043320 [Sorghum bicolor]
gi|241926784|gb|EER99928.1| hypothetical protein SORBIDRAFT_02g043320 [Sorghum bicolor]
Length = 352
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ ELH++FV AV+QLG DKA PK I+ LM +PGLT ++ SHLQ+ L
Sbjct: 39 STDAKPRLKWTPELHERFVEAVHQLGGPDKATPKTIMRLMGIPGLTLYHLKSHLQKYRLS 98
Query: 272 K 272
K
Sbjct: 99 K 99
>gi|22330835|ref|NP_187053.2| myb family transcription factor [Arabidopsis thaliana]
gi|18377833|gb|AAL67103.1| AT3g04030/T11I18_14 [Arabidopsis thaliana]
gi|23505989|gb|AAN28854.1| At3g04030/T11I18_14 [Arabidopsis thaliana]
gi|332640506|gb|AEE74027.1| myb family transcription factor [Arabidopsis thaliana]
Length = 388
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 50/71 (70%), Gaps = 7/71 (9%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH++F+ AVNQLG DKA PK I+++M +PGLT ++ SH LQ
Sbjct: 41 STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSH-----LQ 95
Query: 272 KFRLYLKRLNG 282
K+RL K LNG
Sbjct: 96 KYRLS-KNLNG 105
>gi|297171130|gb|ADI22141.1| HD-GYP domain [uncultured myxobacterium HF0200_19H16]
Length = 496
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+ P RVLVVDD+ L I+ + L Y V A ALD L+ FDV+L+D+
Sbjct: 9 DEVP---RVLVVDDEEAVLDIVNEFLVLEGYYVKPVGSARAALDQLKTEP--FDVILTDL 63
Query: 88 HMPDMDGFKLLEHIGLEMDLPVIT----DGRVSAVMRGIRHGACDYLIKPIREEELKNIW 143
MPDMDG +L++ I PV+ G V + ++ GA DY++KP + +++ +
Sbjct: 64 KMPDMDGIELIQRIRDWNPDPVLVMMTGFGTVETAIEAMKLGAFDYILKPFKPDDVVAVL 123
Query: 144 QHVVRKR--WNEN---KEHENSGSLEETDHHKRGSDE 175
+ + KR EN +E N L E RG DE
Sbjct: 124 KRALEKRRLRRENLSLRETLNFYELSEILSSDRGLDE 160
>gi|421499169|ref|ZP_15946226.1| two-component system response regulator [Aeromonas media WS]
gi|407181832|gb|EKE55832.1| two-component system response regulator [Aeromonas media WS]
Length = 426
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+VDDD + L+++ LR Y V T A ALD LR+++ D+VLSD+ M MDG
Sbjct: 3 RILLVDDDASLLKLMSMRLRSQGYEVDTADSAEGALDRLRQQRA--DLVLSDLRMGGMDG 60
Query: 95 FKLLEHIGLE-MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
L E I + + +PVI G + ++ R G +L KPI ++EL +H +
Sbjct: 61 LALFERIQSQWLGMPVIIMTAHGTIPDAIQATRSGVFSFLTKPIDKDELLVTIEHAL 117
>gi|325972397|ref|YP_004248588.1| response regulator receiver modulated metal dependent
phosphohydrolase [Sphaerochaeta globus str. Buddy]
gi|324027635|gb|ADY14394.1| response regulator receiver modulated metal dependent
phosphohydrolase [Sphaerochaeta globus str. Buddy]
Length = 341
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
++ DDD +IL+ MLR+ Y VT C + L +LR+ + D++L D+ MP GF
Sbjct: 5 IVTTDDDPAIRKILQIMLRKEGYMVTACEEGNGLLQLLRQSEESIDLILLDIKMPGFSGF 64
Query: 96 KLLEHIGLEMDLPVITDGRVSAV------MRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
+LLE I P I ++A M+ +R GA DYL KP+ E L V++
Sbjct: 65 ELLEMI--RASYPQIPIVMITAFNDLDTGMKAMRMGASDYLAKPVHREALFA----TVKR 118
Query: 150 RWNENKEHENSGSLEETDHHKRGSDEIEYA---SSVNEGTEGTFKAQRKRISAKE 201
+E ++ + + H+R E E +S+ + T T +A + I K+
Sbjct: 119 VLDEAEKEQQLLDKQMQSQHQRALLETELKEVLTSLQDTTIATLEAFSETIEQKD 173
>gi|15238770|ref|NP_197325.1| myb-related protein 1 [Arabidopsis thaliana]
gi|42573403|ref|NP_974798.1| myb-related protein 1 [Arabidopsis thaliana]
gi|9758906|dbj|BAB09482.1| transfactor-like protein [Arabidopsis thaliana]
gi|332005140|gb|AED92523.1| myb-related protein 1 [Arabidopsis thaliana]
gi|332005141|gb|AED92524.1| myb-related protein 1 [Arabidopsis thaliana]
Length = 402
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 7/89 (7%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLGI-DKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH++FV AVNQLG DKA PK I+++M +PGLT ++ SH LQ
Sbjct: 41 STDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSH-----LQ 95
Query: 272 KFRLYLKRLNGVSQQGGITNSFCAPIETN 300
K+RL K LNG + S +E N
Sbjct: 96 KYRLS-KNLNGQANSSLNKTSVMTMVEEN 123
>gi|308444916|gb|ADO32622.1| myb family transcription factor [Arabidopsis thaliana]
Length = 392
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 50/71 (70%), Gaps = 7/71 (9%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH++F+ AVNQLG DKA PK I+++M +PGLT ++ SH LQ
Sbjct: 41 STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSH-----LQ 95
Query: 272 KFRLYLKRLNG 282
K+RL K LNG
Sbjct: 96 KYRLS-KNLNG 105
>gi|186509740|ref|NP_001118567.1| myb family transcription factor [Arabidopsis thaliana]
gi|6223653|gb|AAF05867.1|AC011698_18 transfactor-like [Arabidopsis thaliana]
gi|332640508|gb|AEE74029.1| myb family transcription factor [Arabidopsis thaliana]
Length = 394
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 50/71 (70%), Gaps = 7/71 (9%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH++F+ AVNQLG DKA PK I+++M +PGLT ++ SH LQ
Sbjct: 41 STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSH-----LQ 95
Query: 272 KFRLYLKRLNG 282
K+RL K LNG
Sbjct: 96 KYRLS-KNLNG 105
>gi|415831830|ref|ZP_11517381.1| transcriptional regulatory protein zraR [Escherichia coli OK1357]
gi|323182104|gb|EFZ67514.1| transcriptional regulatory protein zraR [Escherichia coli OK1357]
Length = 441
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPI 134
L+ I L +PV+ S+V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|30686726|ref|NP_850842.1| myb-related protein 1 [Arabidopsis thaliana]
gi|42573401|ref|NP_974797.1| myb-related protein 1 [Arabidopsis thaliana]
gi|12658972|gb|AAK01148.1|AF291817_1 MYR1 [Arabidopsis thaliana]
gi|332005142|gb|AED92525.1| myb-related protein 1 [Arabidopsis thaliana]
gi|332005143|gb|AED92526.1| myb-related protein 1 [Arabidopsis thaliana]
Length = 396
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 7/89 (7%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLGI-DKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH++FV AVNQLG DKA PK I+++M +PGLT ++ SH LQ
Sbjct: 41 STDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSH-----LQ 95
Query: 272 KFRLYLKRLNGVSQQGGITNSFCAPIETN 300
K+RL K LNG + S +E N
Sbjct: 96 KYRLS-KNLNGQANSSLNKTSVMTMVEEN 123
>gi|170021993|ref|YP_001726947.1| transcriptional regulatory protein ZraR [Escherichia coli ATCC
8739]
gi|194439783|ref|ZP_03071850.1| response regulator ZraR [Escherichia coli 101-1]
gi|251787262|ref|YP_003001566.1| ZraR transcriptional activator [Escherichia coli BL21(DE3)]
gi|253775366|ref|YP_003038197.1| transcriptional regulatory protein ZraR [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163946|ref|YP_003047054.1| transcriptional regulatory protein ZraR [Escherichia coli B str.
REL606]
gi|254290696|ref|YP_003056444.1| fused response regulator/sigma54 interaction protein [Escherichia
coli BL21(DE3)]
gi|300928824|ref|ZP_07144332.1| response regulator receiver domain protein [Escherichia coli MS
187-1]
gi|386616826|ref|YP_006136492.1| transcriptional regulatory protein ZraR [Escherichia coli UMNK88]
gi|386707252|ref|YP_006171099.1| Response regulator containing CheY-like receiver, AAA-type ATPase,
and DNA-binding domains [Escherichia coli P12b]
gi|387614684|ref|YP_006117800.1| two-component system response regulator [Escherichia coli ETEC
H10407]
gi|417610775|ref|ZP_12261261.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_DG131-3]
gi|422789418|ref|ZP_16842147.1| sigma-54 interaction domain-containing protein [Escherichia coli
H489]
gi|422794385|ref|ZP_16847072.1| sigma-54 interaction domain-containing protein [Escherichia coli
TA007]
gi|425291224|ref|ZP_18682027.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
3006]
gi|432367509|ref|ZP_19610619.1| transcriptional regulatory protein zraR [Escherichia coli KTE10]
gi|432487796|ref|ZP_19729700.1| transcriptional regulatory protein zraR [Escherichia coli KTE212]
gi|432528857|ref|ZP_19765925.1| transcriptional regulatory protein zraR [Escherichia coli KTE233]
gi|432673093|ref|ZP_19908607.1| transcriptional regulatory protein zraR [Escherichia coli KTE119]
gi|433175939|ref|ZP_20360435.1| transcriptional regulatory protein zraR [Escherichia coli KTE232]
gi|442599346|ref|ZP_21017065.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|169756921|gb|ACA79620.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Escherichia coli ATCC 8739]
gi|194421280|gb|EDX37300.1| response regulator ZraR [Escherichia coli 101-1]
gi|242379535|emb|CAQ34351.1| ZraR transcriptional activator [Escherichia coli BL21(DE3)]
gi|253326410|gb|ACT31012.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253975847|gb|ACT41518.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator/sigma54 interaction
protein [Escherichia coli B str. REL606]
gi|253980003|gb|ACT45673.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator/sigma54 interaction
protein [Escherichia coli BL21(DE3)]
gi|300463205|gb|EFK26698.1| response regulator receiver domain protein [Escherichia coli MS
187-1]
gi|309704420|emb|CBJ03769.1| two-component system response regulator [Escherichia coli ETEC
H10407]
gi|323958931|gb|EGB54606.1| sigma-54 interaction domain-containing protein [Escherichia coli
H489]
gi|323969078|gb|EGB64386.1| sigma-54 interaction domain-containing protein [Escherichia coli
TA007]
gi|332345995|gb|AEE59329.1| transcriptional regulatory protein ZraR [Escherichia coli UMNK88]
gi|345352649|gb|EGW84894.1| transcriptional regulatory protein zraR [Escherichia coli
STEC_DG131-3]
gi|383105420|gb|AFG42929.1| Response regulator containing CheY-like receiver, AAA-type ATPase,
and DNA-binding domains [Escherichia coli P12b]
gi|408208536|gb|EKI33181.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
3006]
gi|430890548|gb|ELC13181.1| transcriptional regulatory protein zraR [Escherichia coli KTE10]
gi|431012886|gb|ELD26640.1| transcriptional regulatory protein zraR [Escherichia coli KTE212]
gi|431059472|gb|ELD68829.1| transcriptional regulatory protein zraR [Escherichia coli KTE233]
gi|431206969|gb|ELF05287.1| transcriptional regulatory protein zraR [Escherichia coli KTE119]
gi|431686543|gb|ELJ52108.1| transcriptional regulatory protein zraR [Escherichia coli KTE232]
gi|441651847|emb|CCQ02562.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O5:K4(L):H4 str. ATCC 23502]
Length = 441
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPI 134
L+ I L +PV+ S+V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|14596181|gb|AAK68818.1| transfactor-like protein [Arabidopsis thaliana]
Length = 402
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 7/89 (7%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLGI-DKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH++FV AVNQLG DKA PK I+++M +PGLT ++ SH LQ
Sbjct: 41 STDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSH-----LQ 95
Query: 272 KFRLYLKRLNGVSQQGGITNSFCAPIETN 300
K+RL K LNG + S +E N
Sbjct: 96 KYRLS-KNLNGQANSSLNKTSVMTMVEEN 123
>gi|297833084|ref|XP_002884424.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330264|gb|EFH60683.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 394
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 50/71 (70%), Gaps = 7/71 (9%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH++F+ AVNQLG DKA PK I+++M +PGLT ++ SH LQ
Sbjct: 41 STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSH-----LQ 95
Query: 272 KFRLYLKRLNG 282
K+RL K LNG
Sbjct: 96 KYRLS-KNLNG 105
>gi|220906550|ref|YP_002481861.1| winged helix family two component transcriptional regulator
[Cyanothece sp. PCC 7425]
gi|219863161|gb|ACL43500.1| two component transcriptional regulator, winged helix family
[Cyanothece sp. PCC 7425]
Length = 243
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L YNV T + AL+ RE D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYNVVTAADGEEALETFREE--VPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
+ + + + E D+P+I G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|386626918|ref|YP_006146646.1| transcriptional regulatory protein ZraR [Escherichia coli O7:K1
str. CE10]
gi|349740654|gb|AEQ15360.1| transcriptional regulatory protein ZraR [Escherichia coli O7:K1
str. CE10]
Length = 441
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPI 134
L+ I L +PV+ S+V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|28059694|gb|AAO30084.1| transfactor-like protein [Arabidopsis thaliana]
Length = 402
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 7/89 (7%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLGI-DKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH++FV AVNQLG DKA PK I+++M +PGLT ++ SH LQ
Sbjct: 41 STDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSH-----LQ 95
Query: 272 KFRLYLKRLNGVSQQGGITNSFCAPIETN 300
K+RL K LNG + S +E N
Sbjct: 96 KYRLS-KNLNGQANSSLNKTSVMTMVEEN 123
>gi|218702639|ref|YP_002410268.1| transcriptional regulatory protein ZraR [Escherichia coli IAI39]
gi|218372625|emb|CAR20500.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator ; sigma54
interaction protein [Escherichia coli IAI39]
Length = 441
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPI 134
L+ I L +PV+ S+V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|188492788|ref|ZP_03000058.1| response regulator ZraR [Escherichia coli 53638]
gi|188487987|gb|EDU63090.1| response regulator ZraR [Escherichia coli 53638]
Length = 441
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPI 134
L+ I L +PV+ S+V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|42573405|ref|NP_974799.1| myb-related protein 1 [Arabidopsis thaliana]
gi|332005144|gb|AED92527.1| myb-related protein 1 [Arabidopsis thaliana]
Length = 400
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 7/89 (7%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLGI-DKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH++FV AVNQLG DKA PK I+++M +PGLT ++ SH LQ
Sbjct: 41 STDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSH-----LQ 95
Query: 272 KFRLYLKRLNGVSQQGGITNSFCAPIETN 300
K+RL K LNG + S +E N
Sbjct: 96 KYRLS-KNLNGQANSSLNKTSVMTMVEEN 123
>gi|86158331|ref|YP_465116.1| two component sigma54 specific Fis family transcriptional regulator
[Anaeromyxobacter dehalogenans 2CP-C]
gi|85774842|gb|ABC81679.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Anaeromyxobacter dehalogenans 2CP-C]
Length = 473
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
VL+VDD++ R+L ML+R Y VTT + AL +L + VV++D+ MP + G
Sbjct: 4 VLIVDDEVNIRRVLAAMLKREGYEVTTAADGEQALGVL--HRTPVHVVVTDLVMPRVGGM 61
Query: 96 KLLEHIGLEM-DLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 148
+LL + + D+PVI G V + + ++ GA DY+ KP ++ELK + R
Sbjct: 62 ELLRRVSQDFPDVPVILITAHGSVDSAVAALKAGAFDYITKPFEQDELKKVIAKAAR 118
>gi|356561331|ref|XP_003548936.1| PREDICTED: uncharacterized protein LOC100789797 [Glycine max]
Length = 422
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH++F+ AVNQLG DKA PK +L+LM +PGLT ++ SHLQ+ +
Sbjct: 41 STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVLKLMGIPGLTLYHLKSHLQKYRIS 100
Query: 272 K 272
K
Sbjct: 101 K 101
>gi|334706228|ref|ZP_08522094.1| two-component system response regulator [Aeromonas caviae Ae398]
Length = 426
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+VDDD + L+++ LR Y V T A ALD LR+++ D+VLSD+ M MDG
Sbjct: 3 RILLVDDDASLLKLMSMRLRSQGYEVDTADSAEGALDRLRQQRA--DLVLSDLRMGGMDG 60
Query: 95 FKLLEHIGLE-MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
L E I + + +PVI G + ++ R G +L KPI ++EL +H +
Sbjct: 61 LALFERIQSQWLGMPVIIMTAHGTIPDAIQATRSGVFSFLTKPIDKDELLVTIEHAL 117
>gi|333378870|ref|ZP_08470597.1| hypothetical protein HMPREF9456_02192 [Dysgonomonas mossii DSM
22836]
gi|332885682|gb|EGK05928.1| hypothetical protein HMPREF9456_02192 [Dysgonomonas mossii DSM
22836]
Length = 377
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 68/110 (61%), Gaps = 8/110 (7%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDD +T + +L+ +L + +NV T + A++I+R K D++L D++MP+MDGF
Sbjct: 10 ILVVDDVMTNVLLLQVLLDKEGFNVVTANDGQAAIEIIR--KDVPDLILLDINMPNMDGF 67
Query: 96 KLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEEL 139
+++ + L ++PVI V ++++G R G DY+ KP +EEL
Sbjct: 68 EVIREVKKYSLYREIPVIFLTAMNDVDSIVKGFRLGGSDYITKPFNKEEL 117
>gi|218697712|ref|YP_002405379.1| transcriptional regulatory protein ZraR [Escherichia coli 55989]
gi|332282918|ref|ZP_08395331.1| transcriptional regulatory protein ZraR [Shigella sp. D9]
gi|407467010|ref|YP_006786548.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 2009EL-2071]
gi|407484266|ref|YP_006781416.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 2011C-3493]
gi|410484812|ref|YP_006772358.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 2009EL-2050]
gi|417161108|ref|ZP_11997441.1| transcriptional regulator ZraR [Escherichia coli 99.0741]
gi|417599455|ref|ZP_12250075.1| transcriptional regulatory protein zraR [Escherichia coli 3030-1]
gi|417835440|ref|ZP_12481879.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 01-09591]
gi|417868436|ref|ZP_12513463.1| hydG [Escherichia coli O104:H4 str. C227-11]
gi|419394324|ref|ZP_13935116.1| response regulator [Escherichia coli DEC15A]
gi|419399459|ref|ZP_13940214.1| response regulator [Escherichia coli DEC15B]
gi|419404700|ref|ZP_13945412.1| response regulator [Escherichia coli DEC15C]
gi|419409862|ref|ZP_13950542.1| response regulator [Escherichia coli DEC15D]
gi|419415426|ref|ZP_13956053.1| response regulator [Escherichia coli DEC15E]
gi|422990268|ref|ZP_16981040.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. C227-11]
gi|422997165|ref|ZP_16987927.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. C236-11]
gi|423002261|ref|ZP_16993012.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 09-7901]
gi|423005917|ref|ZP_16996662.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 04-8351]
gi|423012475|ref|ZP_17003206.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-3677]
gi|423021709|ref|ZP_17012414.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4404]
gi|423026865|ref|ZP_17017559.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4522]
gi|423032693|ref|ZP_17023379.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4623]
gi|423035568|ref|ZP_17026244.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C1]
gi|423040689|ref|ZP_17031357.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C2]
gi|423047374|ref|ZP_17038032.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C3]
gi|423055912|ref|ZP_17044718.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C4]
gi|423057917|ref|ZP_17046715.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C5]
gi|425425035|ref|ZP_18806174.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
0.1288]
gi|429721750|ref|ZP_19256662.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-9450]
gi|429773828|ref|ZP_19305838.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02030]
gi|429779012|ref|ZP_19310974.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02033-1]
gi|429782847|ref|ZP_19314768.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02092]
gi|429788240|ref|ZP_19320123.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02093]
gi|429794679|ref|ZP_19326516.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02281]
gi|429800639|ref|ZP_19332424.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02318]
gi|429804251|ref|ZP_19336004.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02913]
gi|429809076|ref|ZP_19340787.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-03439]
gi|429814841|ref|ZP_19346507.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-04080]
gi|429819801|ref|ZP_19351427.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-03943]
gi|429906119|ref|ZP_19372092.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-9990]
gi|429910253|ref|ZP_19376212.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-9941]
gi|429916151|ref|ZP_19382095.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4984]
gi|429921200|ref|ZP_19387124.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-5604]
gi|429927007|ref|ZP_19392916.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4986]
gi|429930938|ref|ZP_19396836.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4987]
gi|429937480|ref|ZP_19403364.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4988]
gi|429943157|ref|ZP_19409028.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-5603]
gi|429945839|ref|ZP_19411697.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-6006]
gi|429953402|ref|ZP_19419244.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec12-0465]
gi|429956746|ref|ZP_19422576.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec12-0466]
gi|432762908|ref|ZP_19997367.1| transcriptional regulatory protein zraR [Escherichia coli KTE48]
gi|218354444|emb|CAV01260.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator ; sigma54
interaction protein [Escherichia coli 55989]
gi|332105270|gb|EGJ08616.1| transcriptional regulatory protein ZraR [Shigella sp. D9]
gi|340732020|gb|EGR61159.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 01-09591]
gi|341921725|gb|EGT71321.1| hydG [Escherichia coli O104:H4 str. C227-11]
gi|345347514|gb|EGW79820.1| transcriptional regulatory protein zraR [Escherichia coli 3030-1]
gi|354857018|gb|EHF17475.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. C236-11]
gi|354860811|gb|EHF21252.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 04-8351]
gi|354861335|gb|EHF21775.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. C227-11]
gi|354870041|gb|EHF30447.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 09-7901]
gi|354875807|gb|EHF36172.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-3677]
gi|354884530|gb|EHF44842.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4404]
gi|354888308|gb|EHF48568.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4522]
gi|354891861|gb|EHF52080.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4623]
gi|354903893|gb|EHF63992.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C1]
gi|354907415|gb|EHF67478.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C2]
gi|354909190|gb|EHF69224.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C3]
gi|354911920|gb|EHF71923.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C4]
gi|354919801|gb|EHF79741.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-4632 C5]
gi|378232523|gb|EHX92622.1| response regulator [Escherichia coli DEC15A]
gi|378239411|gb|EHX99401.1| response regulator [Escherichia coli DEC15B]
gi|378242184|gb|EHY02147.1| response regulator [Escherichia coli DEC15C]
gi|378250492|gb|EHY10397.1| response regulator [Escherichia coli DEC15D]
gi|378254899|gb|EHY14760.1| response regulator [Escherichia coli DEC15E]
gi|386174247|gb|EIH46247.1| transcriptional regulator ZraR [Escherichia coli 99.0741]
gi|406779974|gb|AFS59398.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 2009EL-2050]
gi|407056563|gb|AFS76614.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 2011C-3493]
gi|407063045|gb|AFS84092.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. 2009EL-2071]
gi|408340242|gb|EKJ54748.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
0.1288]
gi|429354376|gb|EKY91076.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02030]
gi|429355281|gb|EKY91973.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02033-1]
gi|429356168|gb|EKY92849.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02092]
gi|429369891|gb|EKZ06462.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02093]
gi|429370588|gb|EKZ07153.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02281]
gi|429373195|gb|EKZ09743.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02318]
gi|429385992|gb|EKZ22443.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-02913]
gi|429387937|gb|EKZ24366.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-03439]
gi|429389847|gb|EKZ26265.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-03943]
gi|429399120|gb|EKZ35443.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. 11-04080]
gi|429401326|gb|EKZ37632.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-9990]
gi|429404119|gb|EKZ40398.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-9450]
gi|429412505|gb|EKZ48700.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4984]
gi|429414954|gb|EKZ51127.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4986]
gi|429422504|gb|EKZ58621.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4987]
gi|429426577|gb|EKZ62665.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-4988]
gi|429431547|gb|EKZ67595.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-5603]
gi|429437853|gb|EKZ73850.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-5604]
gi|429441940|gb|EKZ77904.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec12-0465]
gi|429447337|gb|EKZ83260.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-6006]
gi|429453977|gb|EKZ89844.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec12-0466]
gi|429458351|gb|EKZ94178.1| transcriptional regulatory protein zraR [Escherichia coli O104:H4
str. Ec11-9941]
gi|431315006|gb|ELG02936.1| transcriptional regulatory protein zraR [Escherichia coli KTE48]
Length = 441
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPI 134
L+ I L +PV+ S+V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|417141603|ref|ZP_11984455.1| transcriptional regulator ZraR [Escherichia coli 97.0259]
gi|417310611|ref|ZP_12097422.1| Transcriptional regulatory protein zraR [Escherichia coli PCN033]
gi|338767828|gb|EGP22637.1| Transcriptional regulatory protein zraR [Escherichia coli PCN033]
gi|386155506|gb|EIH11857.1| transcriptional regulator ZraR [Escherichia coli 97.0259]
Length = 441
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPI 134
L+ I L +PV+ S+V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|432478954|ref|ZP_19720922.1| transcriptional regulatory protein zraR [Escherichia coli KTE210]
gi|431012149|gb|ELD26214.1| transcriptional regulatory protein zraR [Escherichia coli KTE210]
Length = 441
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPI 134
L+ I L +PV+ S+V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|356502283|ref|XP_003519949.1| PREDICTED: uncharacterized protein LOC100786282 [Glycine max]
Length = 415
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH++F+ AVNQLG DKA PK +L+LM +PGLT ++ SHLQ+ +
Sbjct: 41 STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTVLKLMGIPGLTLYHLKSHLQKYRIS 100
Query: 272 K 272
K
Sbjct: 101 K 101
>gi|297811991|ref|XP_002873879.1| hypothetical protein ARALYDRAFT_488696 [Arabidopsis lyrata subsp.
lyrata]
gi|297319716|gb|EFH50138.1| hypothetical protein ARALYDRAFT_488696 [Arabidopsis lyrata subsp.
lyrata]
Length = 385
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 7/89 (7%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLGI-DKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH++FV AVNQLG DKA PK I+++M +PGLT ++ SH LQ
Sbjct: 24 STDAKPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSH-----LQ 78
Query: 272 KFRLYLKRLNGVSQQGGITNSFCAPIETN 300
K+RL K LNG + S +E N
Sbjct: 79 KYRLS-KNLNGQANSSLNKTSVMTMVEEN 106
>gi|260870715|ref|YP_003237117.1| fused DNA-binding response regulator ZraR in two-component
regulatory system with ZraS: response regulator/sigma 54
interaction protein [Escherichia coli O111:H- str.
11128]
gi|415822094|ref|ZP_11510845.1| transcriptional regulatory protein zraR [Escherichia coli OK1180]
gi|417202070|ref|ZP_12018320.1| transcriptional regulator ZraR [Escherichia coli 4.0522]
gi|417212591|ref|ZP_12022208.1| transcriptional regulator ZraR [Escherichia coli JB1-95]
gi|417594480|ref|ZP_12245166.1| transcriptional regulatory protein zraR [Escherichia coli 2534-86]
gi|419199811|ref|ZP_13743094.1| transcriptional regulatory protein zraR [Escherichia coli DEC8A]
gi|419205364|ref|ZP_13748528.1| response regulator [Escherichia coli DEC8B]
gi|419219007|ref|ZP_13761977.1| response regulator [Escherichia coli DEC8E]
gi|419229655|ref|ZP_13772484.1| response regulator [Escherichia coli DEC9A]
gi|419235210|ref|ZP_13777970.1| response regulator [Escherichia coli DEC9B]
gi|419240568|ref|ZP_13783267.1| response regulator [Escherichia coli DEC9C]
gi|419246164|ref|ZP_13788790.1| response regulator [Escherichia coli DEC9D]
gi|419251988|ref|ZP_13794550.1| response regulator [Escherichia coli DEC9E]
gi|419286975|ref|ZP_13829130.1| response regulator [Escherichia coli DEC10F]
gi|419891238|ref|ZP_14411357.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9570]
gi|419897079|ref|ZP_14416674.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9574]
gi|420090897|ref|ZP_14602658.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9602]
gi|424768680|ref|ZP_18195943.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CFSAN001632]
gi|257767071|dbj|BAI38566.1| fused DNA-binding response regulator ZraR in two-component
regulatory system with ZraS: response regulator/sigma 54
interaction protein [Escherichia coli O111:H- str.
11128]
gi|323177560|gb|EFZ63145.1| transcriptional regulatory protein zraR [Escherichia coli OK1180]
gi|345331587|gb|EGW64047.1| transcriptional regulatory protein zraR [Escherichia coli 2534-86]
gi|378042040|gb|EHW04494.1| transcriptional regulatory protein zraR [Escherichia coli DEC8A]
gi|378045023|gb|EHW07430.1| response regulator [Escherichia coli DEC8B]
gi|378067544|gb|EHW29663.1| response regulator [Escherichia coli DEC9A]
gi|378072520|gb|EHW34578.1| response regulator [Escherichia coli DEC9B]
gi|378075270|gb|EHW37297.1| response regulator [Escherichia coli DEC8E]
gi|378078311|gb|EHW40300.1| response regulator [Escherichia coli DEC9C]
gi|378085927|gb|EHW47809.1| response regulator [Escherichia coli DEC9D]
gi|378088523|gb|EHW50375.1| response regulator [Escherichia coli DEC9E]
gi|378124089|gb|EHW85502.1| response regulator [Escherichia coli DEC10F]
gi|386186957|gb|EIH75780.1| transcriptional regulator ZraR [Escherichia coli 4.0522]
gi|386194831|gb|EIH89074.1| transcriptional regulator ZraR [Escherichia coli JB1-95]
gi|388350728|gb|EIL16062.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9570]
gi|388355897|gb|EIL20712.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9574]
gi|394384974|gb|EJE62523.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9602]
gi|421945849|gb|EKU03034.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CFSAN001632]
Length = 441
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPI 134
L+ I L +PV+ S+V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|194434761|ref|ZP_03067012.1| response regulator ZraR [Shigella dysenteriae 1012]
gi|416285190|ref|ZP_11647661.1| Response regulator of zinc sigma-54-dependent two-component system
[Shigella boydii ATCC 9905]
gi|417674802|ref|ZP_12324234.1| transcriptional regulatory protein zraR [Shigella dysenteriae
155-74]
gi|420349990|ref|ZP_14851352.1| transcriptional regulatory protein zraR [Shigella boydii 965-58]
gi|194416985|gb|EDX33103.1| response regulator ZraR [Shigella dysenteriae 1012]
gi|320179532|gb|EFW54483.1| Response regulator of zinc sigma-54-dependent two-component system
[Shigella boydii ATCC 9905]
gi|332085401|gb|EGI90571.1| transcriptional regulatory protein zraR [Shigella dysenteriae
155-74]
gi|391264035|gb|EIQ23032.1| transcriptional regulatory protein zraR [Shigella boydii 965-58]
Length = 441
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPI 134
L+ I L +PV+ S+V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|417807695|ref|ZP_12454621.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. LB226692]
gi|340737591|gb|EGR71846.1| transcriptional regulatory protein ZraR [Escherichia coli O104:H4
str. LB226692]
Length = 408
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPI 134
L+ I L +PV+ S+V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|420376193|ref|ZP_14875976.1| transcriptional regulatory protein zraR [Shigella flexneri 1235-66]
gi|391306357|gb|EIQ64114.1| transcriptional regulatory protein zraR [Shigella flexneri 1235-66]
Length = 441
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 66/125 (52%), Gaps = 6/125 (4%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR Y V AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYEVALAYSGRAALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPIREEELKNIWQHVVRKRW 151
L+ I L +PV+ S+V + ++ GA DYLIKP+ + L+ + + R
Sbjct: 66 ATLKEIKALNPAIPVLIMTAFSSVETAIEALKTGALDYLIKPLDFDRLQETLEKALAHRR 125
Query: 152 NENKE 156
E
Sbjct: 126 ETGAE 130
>gi|297519348|ref|ZP_06937734.1| transcriptional regulatory protein ZraR [Escherichia coli OP50]
Length = 239
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 64/109 (58%), Gaps = 6/109 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPIREEELK 140
L+ I L +PV+ S+V + ++ GA DYLIKP+ + L+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQ 114
>gi|420097350|ref|ZP_14608652.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9634]
gi|394384625|gb|EJE62182.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H8
str. CVM9634]
Length = 441
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPI 134
L+ I L +PV+ S+V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|327533492|gb|AEA92684.1| TOC1 [Phaseolus vulgaris]
Length = 561
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 11/146 (7%)
Query: 11 SGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVAL 70
SGG +G S + + +R+L+ D+D + + +L C Y VT +
Sbjct: 13 SGGGNHGKSGDGFIDR-----SKVRILLCDNDSNSSQEVFTLLLGCSYQVTLVKSPRQVI 67
Query: 71 DILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMD---LPVI---TDGRVSAVMRGIRH 124
D L ++L+++ +P G K+L++I + + +PVI VS V++ +R
Sbjct: 68 DALNAEGQHIGIILAELDLPTKKGMKMLKYIARDKEFRRIPVIMMSAQDEVSVVVKCLRL 127
Query: 125 GACDYLIKPIREEELKNIWQHVVRKR 150
GA DYL+KP+R EL N+W H+ +R
Sbjct: 128 GAADYLVKPLRTNELLNLWMHMWGRR 153
>gi|434387698|ref|YP_007098309.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Chamaesiphon minutus PCC 6605]
gi|428018688|gb|AFY94782.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Chamaesiphon minutus PCC 6605]
Length = 242
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDD+ + RILE L Y+V T + AL+ RE C D+V+ DV MP +DG+
Sbjct: 8 ILVVDDEASIRRILETRLSMIGYDVVTAADGEEALETFRE--TCPDLVVLDVMMPKLDGY 65
Query: 96 KLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
+ + + E D+P+I G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 66 GVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|153004853|ref|YP_001379178.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
gi|152028426|gb|ABS26194.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
Length = 357
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+VDDD + ++ +L Y VT S A ALD R F +V+SDV MP DG
Sbjct: 10 RILIVDDDTSVRDVIAVLLGEEGYAVTAVSSAEAALDAARLTD--FSLVISDVRMPGKDG 67
Query: 95 FKLLEHIG-LEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 150
F LLE + L D VI G A + +R+GA DYL+KP + +L + + +R
Sbjct: 68 FWLLERVRELHPDTAVIMLTAFGDTEAAVECLRNGAADYLLKPPKVTDLIRAIERALGRR 127
Query: 151 WNENKEHENSGSLE 164
E H SLE
Sbjct: 128 RLELARHRYRRSLE 141
>gi|291285419|ref|YP_003502237.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. CB9615]
gi|387509454|ref|YP_006161710.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. RM12579]
gi|416779198|ref|ZP_11876288.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. G5101]
gi|416790420|ref|ZP_11881177.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H-
str. 493-89]
gi|416802240|ref|ZP_11886066.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H-
str. H 2687]
gi|416813079|ref|ZP_11891005.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. 3256-97]
gi|416823562|ref|ZP_11895607.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. USDA 5905]
gi|416833824|ref|ZP_11900601.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. LSU-61]
gi|419078215|ref|ZP_13623707.1| response regulator [Escherichia coli DEC3F]
gi|419117583|ref|ZP_13662586.1| response regulator [Escherichia coli DEC5A]
gi|419123817|ref|ZP_13668735.1| response regulator [Escherichia coli DEC5B]
gi|419128812|ref|ZP_13673676.1| response regulator [Escherichia coli DEC5C]
gi|419134144|ref|ZP_13678964.1| response regulator [Escherichia coli DEC5D]
gi|419139428|ref|ZP_13684213.1| transcriptional regulatory protein zraR [Escherichia coli DEC5E]
gi|420283284|ref|ZP_14785511.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW06591]
gi|425146867|ref|ZP_18546840.1| transcriptional regulatory protein zraR [Escherichia coli 10.0869]
gi|425251931|ref|ZP_18644855.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
5905]
gi|425264029|ref|ZP_18656001.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC96038]
gi|425270021|ref|ZP_18661627.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
5412]
gi|445014853|ref|ZP_21330944.1| transcriptional regulatory protein zraR [Escherichia coli PA48]
gi|209751638|gb|ACI74126.1| response regulator HydG [Escherichia coli]
gi|209751644|gb|ACI74129.1| response regulator HydG [Escherichia coli]
gi|290765292|gb|ADD59253.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. CB9615]
gi|320639095|gb|EFX08735.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. G5101]
gi|320644489|gb|EFX13552.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H-
str. 493-89]
gi|320649808|gb|EFX18329.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H-
str. H 2687]
gi|320655141|gb|EFX23097.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. 3256-97 TW 07815]
gi|320660785|gb|EFX28239.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. USDA 5905]
gi|320665903|gb|EFX32934.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. LSU-61]
gi|374361448|gb|AEZ43155.1| transcriptional regulatory protein ZraR [Escherichia coli O55:H7
str. RM12579]
gi|377916446|gb|EHU80529.1| response regulator [Escherichia coli DEC3F]
gi|377956639|gb|EHV20186.1| response regulator [Escherichia coli DEC5A]
gi|377958261|gb|EHV21777.1| response regulator [Escherichia coli DEC5B]
gi|377968519|gb|EHV31911.1| response regulator [Escherichia coli DEC5C]
gi|377970169|gb|EHV33540.1| response regulator [Escherichia coli DEC5D]
gi|377979732|gb|EHV43008.1| transcriptional regulatory protein zraR [Escherichia coli DEC5E]
gi|390778950|gb|EIO46700.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW06591]
gi|408161065|gb|EKH89048.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
5905]
gi|408176761|gb|EKI03596.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC96038]
gi|408179972|gb|EKI06618.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
5412]
gi|408588111|gb|EKK62712.1| transcriptional regulatory protein zraR [Escherichia coli 10.0869]
gi|444619781|gb|ELV93807.1| transcriptional regulatory protein zraR [Escherichia coli PA48]
Length = 441
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPI 134
L+ I L +PV+ S+V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|15804595|ref|NP_290636.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. EDL933]
gi|15834181|ref|NP_312954.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. Sakai]
gi|168752030|ref|ZP_02777052.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4113]
gi|168758599|ref|ZP_02783606.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4401]
gi|168764585|ref|ZP_02789592.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4501]
gi|168771477|ref|ZP_02796484.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4486]
gi|168777382|ref|ZP_02802389.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4196]
gi|168780390|ref|ZP_02805397.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4076]
gi|168790365|ref|ZP_02815372.1| response regulator ZraR [Escherichia coli O157:H7 str. EC869]
gi|168798361|ref|ZP_02823368.1| response regulator ZraR [Escherichia coli O157:H7 str. EC508]
gi|195939630|ref|ZP_03085012.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. EC4024]
gi|208805812|ref|ZP_03248149.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4206]
gi|208812972|ref|ZP_03254301.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4045]
gi|208821649|ref|ZP_03261969.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4042]
gi|209396243|ref|YP_002273521.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. EC4115]
gi|217326117|ref|ZP_03442201.1| response regulator ZraR [Escherichia coli O157:H7 str. TW14588]
gi|254796002|ref|YP_003080839.1| transcriptional regulatory protein ZraR [Escherichia coli O157:H7
str. TW14359]
gi|261227284|ref|ZP_05941565.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator, sigma54
[Escherichia coli O157:H7 str. FRIK2000]
gi|261257031|ref|ZP_05949564.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator, sigma54
[Escherichia coli O157:H7 str. FRIK966]
gi|387885226|ref|YP_006315528.1| transcriptional regulatory protein ZraR [Escherichia coli Xuzhou21]
gi|416308228|ref|ZP_11654969.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O157:H7 str. 1044]
gi|416324621|ref|ZP_11665327.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O157:H7 str. 1125]
gi|419047294|ref|ZP_13594227.1| response regulator [Escherichia coli DEC3A]
gi|419048809|ref|ZP_13595729.1| response regulator [Escherichia coli DEC3B]
gi|419059930|ref|ZP_13606725.1| response regulator [Escherichia coli DEC3C]
gi|419065912|ref|ZP_13612605.1| response regulator [Escherichia coli DEC3D]
gi|419072328|ref|ZP_13617922.1| response regulator [Escherichia coli DEC3E]
gi|419083368|ref|ZP_13628807.1| response regulator [Escherichia coli DEC4A]
gi|419089314|ref|ZP_13634660.1| response regulator [Escherichia coli DEC4B]
gi|419095880|ref|ZP_13641148.1| response regulator [Escherichia coli DEC4C]
gi|419095978|ref|ZP_13641231.1| response regulator [Escherichia coli DEC4D]
gi|419106654|ref|ZP_13651771.1| response regulator [Escherichia coli DEC4E]
gi|419107223|ref|ZP_13652334.1| response regulator [Escherichia coli DEC4F]
gi|420272508|ref|ZP_14774852.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA22]
gi|420278153|ref|ZP_14780427.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA40]
gi|420284047|ref|ZP_14786269.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW10246]
gi|420294391|ref|ZP_14796504.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW11039]
gi|420307072|ref|ZP_14809053.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW10119]
gi|420318092|ref|ZP_14819956.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1734]
gi|421815079|ref|ZP_16250773.1| transcriptional regulatory protein zraR [Escherichia coli 8.0416]
gi|421820856|ref|ZP_16256334.1| transcriptional regulatory protein zraR [Escherichia coli 10.0821]
gi|421826798|ref|ZP_16262147.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK920]
gi|421832833|ref|ZP_16268114.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA7]
gi|423728283|ref|ZP_17702030.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA31]
gi|424080353|ref|ZP_17817287.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA505]
gi|424093162|ref|ZP_17829065.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1996]
gi|424106046|ref|ZP_17840754.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1990]
gi|424112682|ref|ZP_17846888.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
93-001]
gi|424118615|ref|ZP_17852429.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA3]
gi|424124816|ref|ZP_17858092.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA5]
gi|424130979|ref|ZP_17863861.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA9]
gi|424143851|ref|ZP_17875681.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA14]
gi|424150217|ref|ZP_17881572.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA15]
gi|424165320|ref|ZP_17886993.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA24]
gi|424258710|ref|ZP_17892533.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA25]
gi|424336286|ref|ZP_17898471.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA28]
gi|424452555|ref|ZP_17904176.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA32]
gi|424458718|ref|ZP_17909793.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA33]
gi|424465251|ref|ZP_17915543.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA39]
gi|424471482|ref|ZP_17921259.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA41]
gi|424477971|ref|ZP_17927266.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA42]
gi|424483752|ref|ZP_17932712.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW07945]
gi|424489947|ref|ZP_17938462.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW09098]
gi|424496662|ref|ZP_17944155.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW09195]
gi|424503268|ref|ZP_17950131.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4203]
gi|424509541|ref|ZP_17955886.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4196]
gi|424516945|ref|ZP_17961506.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW14313]
gi|424523072|ref|ZP_17967156.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW14301]
gi|424528945|ref|ZP_17972636.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4421]
gi|424535088|ref|ZP_17978416.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4422]
gi|424541175|ref|ZP_17984099.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4013]
gi|424547321|ref|ZP_17989629.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4402]
gi|424553518|ref|ZP_17995324.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4439]
gi|424559721|ref|ZP_18001094.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4436]
gi|424566044|ref|ZP_18007026.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4437]
gi|424572171|ref|ZP_18012684.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4448]
gi|424578327|ref|ZP_18018339.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1845]
gi|424584152|ref|ZP_18023778.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1863]
gi|425100825|ref|ZP_18503541.1| transcriptional regulatory protein zraR [Escherichia coli 3.4870]
gi|425112902|ref|ZP_18514803.1| transcriptional regulatory protein zraR [Escherichia coli 6.0172]
gi|425128828|ref|ZP_18529978.1| transcriptional regulatory protein zraR [Escherichia coli 8.0586]
gi|425134597|ref|ZP_18535429.1| transcriptional regulatory protein zraR [Escherichia coli 8.2524]
gi|425141190|ref|ZP_18541551.1| transcriptional regulatory protein zraR [Escherichia coli 10.0833]
gi|425152980|ref|ZP_18552574.1| transcriptional regulatory protein zraR [Escherichia coli 88.0221]
gi|425158881|ref|ZP_18558124.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA34]
gi|425165198|ref|ZP_18564065.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA506]
gi|425170948|ref|ZP_18569402.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA507]
gi|425176992|ref|ZP_18575091.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA504]
gi|425183051|ref|ZP_18580728.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1999]
gi|425189354|ref|ZP_18586605.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1997]
gi|425196080|ref|ZP_18592831.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
NE1487]
gi|425208937|ref|ZP_18604715.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK2001]
gi|425214735|ref|ZP_18610118.1| transcriptional regulatory protein zraR [Escherichia coli PA4]
gi|425220817|ref|ZP_18615760.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA23]
gi|425227467|ref|ZP_18621913.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA49]
gi|425233619|ref|ZP_18627639.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA45]
gi|425239544|ref|ZP_18633244.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TT12B]
gi|425245782|ref|ZP_18639069.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
MA6]
gi|425257773|ref|ZP_18650248.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
CB7326]
gi|425314190|ref|ZP_18703337.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1735]
gi|425320172|ref|ZP_18708929.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1736]
gi|425326312|ref|ZP_18714618.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1737]
gi|425332621|ref|ZP_18720413.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1846]
gi|425338798|ref|ZP_18726117.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1847]
gi|425345091|ref|ZP_18731960.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1848]
gi|425350930|ref|ZP_18737369.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1849]
gi|425357201|ref|ZP_18743243.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1850]
gi|425363153|ref|ZP_18748780.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1856]
gi|425369418|ref|ZP_18754474.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1862]
gi|425375723|ref|ZP_18760342.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1864]
gi|425388610|ref|ZP_18772149.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1866]
gi|425395339|ref|ZP_18778425.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1868]
gi|425401394|ref|ZP_18784080.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1869]
gi|425407490|ref|ZP_18789691.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1870]
gi|425413847|ref|ZP_18795589.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
NE098]
gi|425420065|ref|ZP_18801317.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK523]
gi|425431461|ref|ZP_18812050.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
0.1304]
gi|428949868|ref|ZP_19022119.1| transcriptional regulatory protein zraR [Escherichia coli 88.1467]
gi|428955939|ref|ZP_19027709.1| transcriptional regulatory protein zraR [Escherichia coli 88.1042]
gi|428961896|ref|ZP_19033154.1| transcriptional regulatory protein zraR [Escherichia coli 89.0511]
gi|428968559|ref|ZP_19039243.1| transcriptional regulatory protein zraR [Escherichia coli 90.0091]
gi|428974294|ref|ZP_19044585.1| transcriptional regulatory protein zraR [Escherichia coli 90.0039]
gi|428980761|ref|ZP_19050545.1| transcriptional regulatory protein zraR [Escherichia coli 90.2281]
gi|428986506|ref|ZP_19055875.1| transcriptional regulatory protein zraR [Escherichia coli 93.0055]
gi|428992655|ref|ZP_19061622.1| transcriptional regulatory protein zraR [Escherichia coli 93.0056]
gi|428998548|ref|ZP_19067119.1| transcriptional regulatory protein zraR [Escherichia coli 94.0618]
gi|429004944|ref|ZP_19072982.1| transcriptional regulatory protein zraR [Escherichia coli 95.0183]
gi|429011022|ref|ZP_19078396.1| transcriptional regulatory protein zraR [Escherichia coli 95.1288]
gi|429017441|ref|ZP_19084297.1| transcriptional regulatory protein zraR [Escherichia coli 95.0943]
gi|429023274|ref|ZP_19089768.1| transcriptional regulatory protein zraR [Escherichia coli 96.0428]
gi|429029364|ref|ZP_19095315.1| transcriptional regulatory protein zraR [Escherichia coli 96.0427]
gi|429035506|ref|ZP_19101008.1| transcriptional regulatory protein zraR [Escherichia coli 96.0939]
gi|429041613|ref|ZP_19106681.1| transcriptional regulatory protein zraR [Escherichia coli 96.0932]
gi|429047422|ref|ZP_19112114.1| transcriptional regulatory protein zraR [Escherichia coli 96.0107]
gi|429052836|ref|ZP_19117388.1| transcriptional regulatory protein zraR [Escherichia coli 97.0003]
gi|429058371|ref|ZP_19122596.1| transcriptional regulatory protein zraR [Escherichia coli 97.1742]
gi|429063877|ref|ZP_19127820.1| transcriptional regulatory protein zraR [Escherichia coli 97.0007]
gi|429070123|ref|ZP_19133537.1| transcriptional regulatory protein zraR [Escherichia coli 99.0672]
gi|429075841|ref|ZP_19139080.1| transcriptional regulatory protein zraR [Escherichia coli 99.0678]
gi|429081090|ref|ZP_19144211.1| transcriptional regulatory protein zraR [Escherichia coli 99.0713]
gi|429829276|ref|ZP_19360250.1| transcriptional regulatory protein zraR [Escherichia coli 96.0109]
gi|429835742|ref|ZP_19365962.1| transcriptional regulatory protein zraR [Escherichia coli 97.0010]
gi|444933387|ref|ZP_21252379.1| transcriptional regulatory protein zraR [Escherichia coli 99.0814]
gi|444938828|ref|ZP_21257546.1| transcriptional regulatory protein zraR [Escherichia coli 99.0815]
gi|444944459|ref|ZP_21262929.1| transcriptional regulatory protein zraR [Escherichia coli 99.0816]
gi|444949203|ref|ZP_21267501.1| transcriptional regulatory protein zraR [Escherichia coli 99.0839]
gi|444955541|ref|ZP_21273592.1| transcriptional regulatory protein zraR [Escherichia coli 99.0848]
gi|444960963|ref|ZP_21278769.1| transcriptional regulatory protein zraR [Escherichia coli 99.1753]
gi|444966169|ref|ZP_21283713.1| transcriptional regulatory protein zraR [Escherichia coli 99.1775]
gi|444977490|ref|ZP_21294550.1| transcriptional regulatory protein zraR [Escherichia coli 99.1805]
gi|444988243|ref|ZP_21305005.1| transcriptional regulatory protein zraR [Escherichia coli PA11]
gi|444993620|ref|ZP_21310247.1| transcriptional regulatory protein zraR [Escherichia coli PA19]
gi|444998804|ref|ZP_21315290.1| transcriptional regulatory protein zraR [Escherichia coli PA13]
gi|445004312|ref|ZP_21320688.1| transcriptional regulatory protein zraR [Escherichia coli PA2]
gi|445009742|ref|ZP_21325955.1| transcriptional regulatory protein zraR [Escherichia coli PA47]
gi|445020738|ref|ZP_21336687.1| transcriptional regulatory protein zraR [Escherichia coli PA8]
gi|445026168|ref|ZP_21341977.1| transcriptional regulatory protein zraR [Escherichia coli 7.1982]
gi|445031582|ref|ZP_21347233.1| transcriptional regulatory protein zraR [Escherichia coli 99.1781]
gi|445037022|ref|ZP_21352534.1| transcriptional regulatory protein zraR [Escherichia coli 99.1762]
gi|445042719|ref|ZP_21358076.1| transcriptional regulatory protein zraR [Escherichia coli PA35]
gi|445053463|ref|ZP_21368462.1| transcriptional regulatory protein zraR [Escherichia coli 95.0083]
gi|445061444|ref|ZP_21373947.1| transcriptional regulatory protein zraR [Escherichia coli 99.0670]
gi|452970668|ref|ZP_21968895.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
O157:H7 str. EC4009]
gi|20140981|sp|Q8X613.1|ZRAR_ECO57 RecName: Full=Transcriptional regulatory protein ZraR
gi|12518936|gb|AAG59201.1|AE005632_2 response regulator of hydrogenase 3 activity (sensor HydH)
[Escherichia coli O157:H7 str. EDL933]
gi|13364403|dbj|BAB38350.1| response regulator HydG [Escherichia coli O157:H7 str. Sakai]
gi|187767371|gb|EDU31215.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4196]
gi|188014032|gb|EDU52154.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4113]
gi|189001862|gb|EDU70848.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4076]
gi|189354602|gb|EDU73021.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4401]
gi|189359769|gb|EDU78188.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4486]
gi|189365464|gb|EDU83880.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4501]
gi|189370154|gb|EDU88570.1| response regulator ZraR [Escherichia coli O157:H7 str. EC869]
gi|189379122|gb|EDU97538.1| response regulator ZraR [Escherichia coli O157:H7 str. EC508]
gi|208725613|gb|EDZ75214.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4206]
gi|208734249|gb|EDZ82936.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4045]
gi|208741772|gb|EDZ89454.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4042]
gi|209157643|gb|ACI35076.1| response regulator ZraR [Escherichia coli O157:H7 str. EC4115]
gi|209751640|gb|ACI74127.1| response regulator HydG [Escherichia coli]
gi|209751642|gb|ACI74128.1| response regulator HydG [Escherichia coli]
gi|209751646|gb|ACI74130.1| response regulator HydG [Escherichia coli]
gi|217322338|gb|EEC30762.1| response regulator ZraR [Escherichia coli O157:H7 str. TW14588]
gi|254595402|gb|ACT74763.1| fused DNA-binding response regulator in two-component regulatory
system with ZraS: response regulator, sigma54
interaction protein [Escherichia coli O157:H7 str.
TW14359]
gi|326347144|gb|EGD70874.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O157:H7 str. 1125]
gi|326347605|gb|EGD71327.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O157:H7 str. 1044]
gi|377890718|gb|EHU55174.1| response regulator [Escherichia coli DEC3A]
gi|377901374|gb|EHU65694.1| response regulator [Escherichia coli DEC3C]
gi|377902853|gb|EHU67155.1| response regulator [Escherichia coli DEC3B]
gi|377902883|gb|EHU67184.1| response regulator [Escherichia coli DEC3D]
gi|377906133|gb|EHU70388.1| response regulator [Escherichia coli DEC3E]
gi|377922726|gb|EHU86707.1| response regulator [Escherichia coli DEC4A]
gi|377925870|gb|EHU89807.1| response regulator [Escherichia coli DEC4B]
gi|377935376|gb|EHU99175.1| response regulator [Escherichia coli DEC4C]
gi|377943360|gb|EHV07080.1| response regulator [Escherichia coli DEC4E]
gi|377952166|gb|EHV15764.1| response regulator [Escherichia coli DEC4D]
gi|377967790|gb|EHV31193.1| response regulator [Escherichia coli DEC4F]
gi|386798684|gb|AFJ31718.1| transcriptional regulatory protein ZraR [Escherichia coli Xuzhou21]
gi|390636804|gb|EIN16375.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1996]
gi|390636971|gb|EIN16531.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA505]
gi|390656392|gb|EIN34272.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
93-001]
gi|390658862|gb|EIN36645.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1990]
gi|390673694|gb|EIN49921.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA3]
gi|390677021|gb|EIN53097.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA5]
gi|390680473|gb|EIN56317.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA9]
gi|390695718|gb|EIN70230.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA14]
gi|390696943|gb|EIN71379.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA15]
gi|390711000|gb|EIN83993.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA22]
gi|390716518|gb|EIN89316.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA24]
gi|390717712|gb|EIN90489.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA25]
gi|390723807|gb|EIN96387.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA28]
gi|390736363|gb|EIO07700.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA31]
gi|390737118|gb|EIO08428.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA32]
gi|390740876|gb|EIO11991.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA33]
gi|390755298|gb|EIO24844.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA40]
gi|390757480|gb|EIO26959.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA39]
gi|390761536|gb|EIO30824.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA41]
gi|390764426|gb|EIO33636.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA42]
gi|390785207|gb|EIO52761.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW07945]
gi|390794374|gb|EIO61671.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW11039]
gi|390796667|gb|EIO63935.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW10246]
gi|390799619|gb|EIO66758.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW09098]
gi|390813304|gb|EIO79941.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW10119]
gi|390821063|gb|EIO87278.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW09195]
gi|390822154|gb|EIO88292.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4203]
gi|390827190|gb|EIO92968.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4196]
gi|390840367|gb|EIP04408.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW14313]
gi|390842375|gb|EIP06226.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW14301]
gi|390847399|gb|EIP10942.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4421]
gi|390857879|gb|EIP20303.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4422]
gi|390862280|gb|EIP24480.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4013]
gi|390866210|gb|EIP28185.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4402]
gi|390874611|gb|EIP35714.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4439]
gi|390879968|gb|EIP40687.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4436]
gi|390889862|gb|EIP49565.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4437]
gi|390891016|gb|EIP50659.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC4448]
gi|390905479|gb|EIP64422.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1734]
gi|390914710|gb|EIP73245.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1845]
gi|390915476|gb|EIP73990.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1863]
gi|408062685|gb|EKG97187.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA7]
gi|408063234|gb|EKG97730.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK920]
gi|408063628|gb|EKG98118.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA34]
gi|408074839|gb|EKH09092.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA506]
gi|408079994|gb|EKH14095.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA507]
gi|408088037|gb|EKH21432.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA504]
gi|408094314|gb|EKH27350.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1999]
gi|408100535|gb|EKH33034.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1997]
gi|408105457|gb|EKH37625.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
NE1487]
gi|408118363|gb|EKH49506.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK2001]
gi|408124634|gb|EKH55292.1| transcriptional regulatory protein zraR [Escherichia coli PA4]
gi|408134583|gb|EKH64407.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA23]
gi|408136222|gb|EKH65971.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA49]
gi|408143505|gb|EKH72802.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA45]
gi|408151781|gb|EKH80260.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TT12B]
gi|408156947|gb|EKH85132.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
MA6]
gi|408170031|gb|EKH97262.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
CB7326]
gi|408223286|gb|EKI47069.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1735]
gi|408234472|gb|EKI57486.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1736]
gi|408236966|gb|EKI59834.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1737]
gi|408242647|gb|EKI65214.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1846]
gi|408251491|gb|EKI73221.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1847]
gi|408255901|gb|EKI77321.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1848]
gi|408262583|gb|EKI83518.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1849]
gi|408270785|gb|EKI90951.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1850]
gi|408273740|gb|EKI93782.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1856]
gi|408281883|gb|EKJ01251.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1862]
gi|408287940|gb|EKJ06780.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1864]
gi|408302916|gb|EKJ20392.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1868]
gi|408304086|gb|EKJ21524.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1866]
gi|408315475|gb|EKJ31791.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1869]
gi|408321080|gb|EKJ37131.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1870]
gi|408322492|gb|EKJ38477.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
NE098]
gi|408333887|gb|EKJ48806.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK523]
gi|408341340|gb|EKJ55794.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
0.1304]
gi|408544577|gb|EKK22028.1| transcriptional regulatory protein zraR [Escherichia coli 3.4870]
gi|408545388|gb|EKK22823.1| transcriptional regulatory protein zraR [Escherichia coli 6.0172]
gi|408562950|gb|EKK39097.1| transcriptional regulatory protein zraR [Escherichia coli 8.0586]
gi|408575463|gb|EKK51133.1| transcriptional regulatory protein zraR [Escherichia coli 10.0833]
gi|408578151|gb|EKK53688.1| transcriptional regulatory protein zraR [Escherichia coli 8.2524]
gi|408593036|gb|EKK67377.1| transcriptional regulatory protein zraR [Escherichia coli 88.0221]
gi|408598657|gb|EKK72609.1| transcriptional regulatory protein zraR [Escherichia coli 8.0416]
gi|408608255|gb|EKK81656.1| transcriptional regulatory protein zraR [Escherichia coli 10.0821]
gi|427201024|gb|EKV71430.1| transcriptional regulatory protein zraR [Escherichia coli 88.1042]
gi|427201071|gb|EKV71471.1| transcriptional regulatory protein zraR [Escherichia coli 89.0511]
gi|427204141|gb|EKV74427.1| transcriptional regulatory protein zraR [Escherichia coli 88.1467]
gi|427217157|gb|EKV86229.1| transcriptional regulatory protein zraR [Escherichia coli 90.0091]
gi|427221044|gb|EKV89924.1| transcriptional regulatory protein zraR [Escherichia coli 90.2281]
gi|427223716|gb|EKV92446.1| transcriptional regulatory protein zraR [Escherichia coli 90.0039]
gi|427237446|gb|EKW04987.1| transcriptional regulatory protein zraR [Escherichia coli 93.0056]
gi|427237560|gb|EKW05094.1| transcriptional regulatory protein zraR [Escherichia coli 93.0055]
gi|427241819|gb|EKW09240.1| transcriptional regulatory protein zraR [Escherichia coli 94.0618]
gi|427255502|gb|EKW21766.1| transcriptional regulatory protein zraR [Escherichia coli 95.0183]
gi|427257039|gb|EKW23180.1| transcriptional regulatory protein zraR [Escherichia coli 95.0943]
gi|427257238|gb|EKW23370.1| transcriptional regulatory protein zraR [Escherichia coli 95.1288]
gi|427272801|gb|EKW37520.1| transcriptional regulatory protein zraR [Escherichia coli 96.0428]
gi|427274410|gb|EKW39068.1| transcriptional regulatory protein zraR [Escherichia coli 96.0427]
gi|427280132|gb|EKW44511.1| transcriptional regulatory protein zraR [Escherichia coli 96.0939]
gi|427288694|gb|EKW52309.1| transcriptional regulatory protein zraR [Escherichia coli 96.0932]
gi|427295560|gb|EKW58661.1| transcriptional regulatory protein zraR [Escherichia coli 96.0107]
gi|427296909|gb|EKW59954.1| transcriptional regulatory protein zraR [Escherichia coli 97.0003]
gi|427307232|gb|EKW69713.1| transcriptional regulatory protein zraR [Escherichia coli 97.1742]
gi|427310044|gb|EKW72315.1| transcriptional regulatory protein zraR [Escherichia coli 97.0007]
gi|427314908|gb|EKW76930.1| transcriptional regulatory protein zraR [Escherichia coli 99.0672]
gi|427324609|gb|EKW86077.1| transcriptional regulatory protein zraR [Escherichia coli 99.0678]
gi|427325620|gb|EKW87056.1| transcriptional regulatory protein zraR [Escherichia coli 99.0713]
gi|429250416|gb|EKY35076.1| transcriptional regulatory protein zraR [Escherichia coli 96.0109]
gi|429250913|gb|EKY35551.1| transcriptional regulatory protein zraR [Escherichia coli 97.0010]
gi|444534690|gb|ELV14894.1| transcriptional regulatory protein zraR [Escherichia coli 99.0814]
gi|444545018|gb|ELV23982.1| transcriptional regulatory protein zraR [Escherichia coli 99.0815]
gi|444553895|gb|ELV31487.1| transcriptional regulatory protein zraR [Escherichia coli 99.0816]
gi|444555426|gb|ELV32895.1| transcriptional regulatory protein zraR [Escherichia coli 99.0839]
gi|444558964|gb|ELV36223.1| transcriptional regulatory protein zraR [Escherichia coli 99.0848]
gi|444568527|gb|ELV45200.1| transcriptional regulatory protein zraR [Escherichia coli 99.1753]
gi|444571723|gb|ELV48192.1| transcriptional regulatory protein zraR [Escherichia coli 99.1775]
gi|444587586|gb|ELV63015.1| transcriptional regulatory protein zraR [Escherichia coli 99.1805]
gi|444588916|gb|ELV64275.1| transcriptional regulatory protein zraR [Escherichia coli PA11]
gi|444602808|gb|ELV77538.1| transcriptional regulatory protein zraR [Escherichia coli PA13]
gi|444602837|gb|ELV77566.1| transcriptional regulatory protein zraR [Escherichia coli PA19]
gi|444611988|gb|ELV86299.1| transcriptional regulatory protein zraR [Escherichia coli PA2]
gi|444618339|gb|ELV92425.1| transcriptional regulatory protein zraR [Escherichia coli PA47]
gi|444626063|gb|ELV99869.1| transcriptional regulatory protein zraR [Escherichia coli PA8]
gi|444634751|gb|ELW08206.1| transcriptional regulatory protein zraR [Escherichia coli 7.1982]
gi|444636484|gb|ELW09881.1| transcriptional regulatory protein zraR [Escherichia coli 99.1781]
gi|444641654|gb|ELW14882.1| transcriptional regulatory protein zraR [Escherichia coli 99.1762]
gi|444650934|gb|ELW23747.1| transcriptional regulatory protein zraR [Escherichia coli PA35]
gi|444658746|gb|ELW31184.1| transcriptional regulatory protein zraR [Escherichia coli 95.0083]
gi|444666371|gb|ELW38445.1| transcriptional regulatory protein zraR [Escherichia coli 99.0670]
Length = 441
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPI 134
L+ I L +PV+ S+V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|260858114|ref|YP_003232005.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. 11368]
gi|415785483|ref|ZP_11492983.1| transcriptional regulatory protein zraR [Escherichia coli EPECa14]
gi|417296921|ref|ZP_12084168.1| transcriptional regulator ZraR [Escherichia coli 900105 (10e)]
gi|419212552|ref|ZP_13755611.1| response regulator [Escherichia coli DEC8C]
gi|419218344|ref|ZP_13761330.1| response regulator [Escherichia coli DEC8D]
gi|419258215|ref|ZP_13800693.1| response regulator [Escherichia coli DEC10A]
gi|419258314|ref|ZP_13800789.1| response regulator [Escherichia coli DEC10B]
gi|419264358|ref|ZP_13806754.1| response regulator [Escherichia coli DEC10C]
gi|419274646|ref|ZP_13816935.1| response regulator [Escherichia coli DEC10D]
gi|419877926|ref|ZP_14399429.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9534]
gi|419883864|ref|ZP_14404907.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9545]
gi|419903934|ref|ZP_14422946.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM9942]
gi|419909822|ref|ZP_14428358.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10026]
gi|420103936|ref|ZP_14614727.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9455]
gi|420110729|ref|ZP_14620662.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9553]
gi|420118128|ref|ZP_14627465.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10021]
gi|420123125|ref|ZP_14632023.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10030]
gi|420128695|ref|ZP_14637245.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10224]
gi|420136116|ref|ZP_14644181.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM9952]
gi|424748772|ref|ZP_18176900.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CFSAN001629]
gi|424766577|ref|ZP_18193927.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CFSAN001630]
gi|425382370|ref|ZP_18766340.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1865]
gi|257756763|dbj|BAI28265.1| fused DNA-binding response regulator ZraR in two-component
regulatory system with ZraS: response regulator/sigma 54
interaction protein [Escherichia coli O26:H11 str.
11368]
gi|323155546|gb|EFZ41723.1| transcriptional regulatory protein zraR [Escherichia coli EPECa14]
gi|378047529|gb|EHW09892.1| response regulator [Escherichia coli DEC8C]
gi|378057375|gb|EHW19608.1| response regulator [Escherichia coli DEC8D]
gi|378093222|gb|EHW55039.1| response regulator [Escherichia coli DEC10A]
gi|378113832|gb|EHW75392.1| response regulator [Escherichia coli DEC10D]
gi|378120423|gb|EHW81900.1| response regulator [Escherichia coli DEC10B]
gi|378120662|gb|EHW82132.1| response regulator [Escherichia coli DEC10C]
gi|386260365|gb|EIJ15839.1| transcriptional regulator ZraR [Escherichia coli 900105 (10e)]
gi|388337644|gb|EIL04142.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9534]
gi|388356951|gb|EIL21583.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9545]
gi|388368693|gb|EIL32317.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM9942]
gi|388372441|gb|EIL35865.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10026]
gi|394384916|gb|EJE62467.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10224]
gi|394401182|gb|EJE77027.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10021]
gi|394401723|gb|EJE77502.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9553]
gi|394406026|gb|EJE81109.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CVM9455]
gi|394417578|gb|EJE91302.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM10030]
gi|394418916|gb|EJE92558.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CVM9952]
gi|408292830|gb|EKJ11323.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1865]
gi|421934521|gb|EKT92285.1| transcriptional regulatory protein ZraR [Escherichia coli O111:H11
str. CFSAN001630]
gi|421943584|gb|EKU00866.1| transcriptional regulatory protein ZraR [Escherichia coli O26:H11
str. CFSAN001629]
Length = 441
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPI 134
L+ I L +PV+ S+V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|118638618|gb|ABL09465.1| pseudo-response regulator [Triticum aestivum]
gi|379025584|dbj|BAL63569.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025586|dbj|BAL63570.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025588|dbj|BAL63571.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025590|dbj|BAL63572.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025592|dbj|BAL63573.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025594|dbj|BAL63574.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025596|dbj|BAL63575.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025598|dbj|BAL63576.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025600|dbj|BAL63577.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025602|dbj|BAL63578.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025604|dbj|BAL63579.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025606|dbj|BAL63580.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025608|dbj|BAL63581.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025610|dbj|BAL63582.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025612|dbj|BAL63583.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025614|dbj|BAL63584.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025616|dbj|BAL63585.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025618|dbj|BAL63586.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025620|dbj|BAL63587.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025632|dbj|BAL63593.1| pseudo-response regulator [Triticum durum]
gi|379025634|dbj|BAL63594.1| pseudo-response regulator [Triticum durum]
gi|379025636|dbj|BAL63595.1| pseudo-response regulator [Triticum durum]
gi|379025640|dbj|BAL63597.1| pseudo-response regulator [Triticum durum]
gi|456359214|dbj|BAM93436.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359216|dbj|BAM93437.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 266
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD-M 92
+RVL+V+ D + +++ +LR C+Y V A L++ + D+VL++V M +
Sbjct: 38 IRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYLQDMQSNIDLVLTEVFMHGGL 97
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G LL I + D+PVI + + V+ + +GA D+L KPIR+ ELKN+W HV
Sbjct: 98 SGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHV 157
Query: 147 VRK 149
R+
Sbjct: 158 WRR 160
>gi|91227847|ref|ZP_01262020.1| sensor histidine kinase/response regulator [Vibrio alginolyticus
12G01]
gi|91188357|gb|EAS74653.1| sensor histidine kinase/response regulator [Vibrio alginolyticus
12G01]
Length = 932
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 71/144 (49%), Gaps = 19/144 (13%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+ P L VL VDD+ L+++ +LR + VT CS A+++ E+K +D++ D+
Sbjct: 664 DRLP--LTVLAVDDNPANLKLISALLRERVETVTACSNGQQAVNLATEKK--YDLIFMDI 719
Query: 88 HMPDMDGFKLLEHIG---LEMDLPVITDGRVSAVMRGIRH-----GACDYLIKPIREEEL 139
MP MDG +HI L D PVI + M G R G DYL KPI E L
Sbjct: 720 QMPQMDGVTACKHIKELELNKDTPVI--AVTAHAMAGERDRLLSAGMDDYLTKPIEEHVL 777
Query: 140 KNIWQHVVRKRWNENKEHENSGSL 163
+ + H WN N E+ G +
Sbjct: 778 QQVLVH-----WNPNACTESIGKV 796
>gi|333907190|ref|YP_004480776.1| two component, sigma54 specific, Fis family transcriptional
regulator [Marinomonas posidonica IVIA-Po-181]
gi|333477196|gb|AEF53857.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Marinomonas posidonica IVIA-Po-181]
Length = 449
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 71/123 (57%), Gaps = 13/123 (10%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYN---VTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
+++L+V+DD LE L Y V + +A +AL + G FD+V+SDV++P
Sbjct: 4 VKLLIVEDDKGLAEALEDTLMLASYQCKMVYSAEEAVIAL-----KHGQFDMVVSDVNLP 58
Query: 91 DMDGFKLLEH-IGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKN-IWQH 145
MDG+ LL H + +LP++ G ++ + +R GA DYL+KP +EEEL N I ++
Sbjct: 59 GMDGYGLLHHVVDAYPELPIMLMTAYGDIAHAVEAMRDGAVDYLLKPFQEEELLNAIAKY 118
Query: 146 VVR 148
V+
Sbjct: 119 TVK 121
>gi|269965226|ref|ZP_06179360.1| sensor histidine kinase/response regulator [Vibrio alginolyticus
40B]
gi|269830212|gb|EEZ84439.1| sensor histidine kinase/response regulator [Vibrio alginolyticus
40B]
Length = 932
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 71/144 (49%), Gaps = 19/144 (13%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+ P L VL VDD+ L+++ +LR + VT CS A+++ E+K +D++ D+
Sbjct: 664 DRLP--LTVLAVDDNPANLKLISALLRERVETVTACSNGQQAVNLATEKK--YDLIFMDI 719
Query: 88 HMPDMDGFKLLEHIG---LEMDLPVITDGRVSAVMRGIRH-----GACDYLIKPIREEEL 139
MP MDG +HI L D PVI + M G R G DYL KPI E L
Sbjct: 720 QMPQMDGVTACKHIKELELNKDTPVI--AVTAHAMAGERDRLLSAGMDDYLTKPIEEHVL 777
Query: 140 KNIWQHVVRKRWNENKEHENSGSL 163
+ + H WN N E+ G +
Sbjct: 778 QQVLVH-----WNPNACTESIGKV 796
>gi|86158253|ref|YP_465038.1| response regulator receiver (CheY-like) modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774764|gb|ABC81601.1| response regulator receiver (CheY-like) modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 357
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 75/153 (49%), Gaps = 17/153 (11%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P R+L+VDDD ++ +LR Y TT + A ALD RK + +V+SDV MP
Sbjct: 6 PEATRILIVDDDAAVRDVITVLLREEGYVCTTVASAEAALD--EARKTDYPLVISDVRMP 63
Query: 91 DMDGFKLLEHIG-LEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEEL-KNIWQH 145
DGF LLE + D VI G A + +R+GA DYL+KP + EL + I +
Sbjct: 64 ARDGFWLLEQMREASPDTAVIMLTAYGDTEAAVECLRNGAADYLLKPPKVTELIRAIERA 123
Query: 146 VVRKRWN----------ENKEHENSGSLEETDH 168
+ R+R EN+ E + L T H
Sbjct: 124 LGRRRLELARGRYRRSLENRVKEKTAELSRTLH 156
>gi|333916552|ref|YP_004490284.1| CheA signal transduction histidine kinase [Delftia sp. Cs1-4]
gi|333746752|gb|AEF91929.1| CheA signal transduction histidine kinase [Delftia sp. Cs1-4]
Length = 2140
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
VLVVDD IT R+ +++L+R Y V + A++ L E + VLSD+ MP MDGF
Sbjct: 1995 VLVVDDSITVRRVTQRLLQREGYRVALAADGLQAMERLAEERPTL--VLSDIEMPRMDGF 2052
Query: 96 KLLEHIGLE---MDLPVIT-DGRVSAVMRGIRH--GACDYLIKPIREEELKNIWQH 145
LL +I + DLPV+ R++ R + GA YL KP +EEL + QH
Sbjct: 2053 DLLRNIRADEALRDLPVVMITSRIAQKHREMARQLGANHYLGKPYSDEELLGLIQH 2108
>gi|444927761|ref|ZP_21247010.1| transcriptional regulatory protein zraR [Escherichia coli
09BKT078844]
gi|444535903|gb|ELV15952.1| transcriptional regulatory protein zraR [Escherichia coli
09BKT078844]
Length = 441
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPI 134
L+ I L +PV+ S+V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|160897023|ref|YP_001562605.1| CheA signal transduction histidine kinase [Delftia acidovorans SPH-1]
gi|160362607|gb|ABX34220.1| CheA signal transduction histidine kinase [Delftia acidovorans SPH-1]
Length = 2137
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
VLVVDD IT R+ +++L+R Y V + A++ L E + VLSD+ MP MDGF
Sbjct: 1989 VLVVDDSITVRRVTQRLLQREGYRVALAADGLQAMERLAEERPTL--VLSDIEMPRMDGF 2046
Query: 96 KLLEHIGLE---MDLPVIT-DGRVSAVMRGIRH--GACDYLIKPIREEELKNIWQH 145
LL +I + DLPV+ R++ R + GA YL KP +EEL + QH
Sbjct: 2047 DLLRNIRADEALRDLPVVMITSRIAQKHREMARQLGANHYLGKPYSDEELLGLIQH 2102
>gi|423345959|ref|ZP_17323648.1| hypothetical protein HMPREF1060_01320 [Parabacteroides merdae
CL03T12C32]
gi|409221694|gb|EKN14643.1| hypothetical protein HMPREF1060_01320 [Parabacteroides merdae
CL03T12C32]
Length = 436
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 6/118 (5%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++L+V+D+I+ ++ + + Y+V T +A ++R K FD++LSDV +P+ DG
Sbjct: 4 KILIVEDNISLSQMQKDWFAQAGYDVVTAMNEPIARSLIR--KIQFDLILSDVRLPEGDG 61
Query: 95 FKLLEHIGLEM-DLP-VITDGRVSA--VMRGIRHGACDYLIKPIREEELKNIWQHVVR 148
LLE + E D+P +IT VS V+R I+ GA DYL KP+R+E L + + V R
Sbjct: 62 ISLLEWLRKERKDIPFIITTEYVSVPDVVRTIKLGAIDYLPKPVRKEHLLELAEDVFR 119
>gi|399031353|ref|ZP_10731387.1| signal transduction histidine kinase, partial [Flavobacterium sp.
CF136]
gi|398070342|gb|EJL61647.1| signal transduction histidine kinase, partial [Flavobacterium sp.
CF136]
Length = 1265
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 15/127 (11%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D P G +VL+VDDD+ L L L R NV + A+DIL E K D+VL D+
Sbjct: 1141 DVLP-GKKVLLVDDDVRNLFALTTALERYGLNVISAESGQEAIDILNEDK-TIDIVLMDI 1198
Query: 88 HMPDMDGFKLLEHI---GLEMDLPVITDGRVSAVMRG-----IRHGACDYLIKPIREEEL 139
MP+MDG++ ++ I DL +I + M+G I GA DY+ KP+ E+L
Sbjct: 1199 MMPEMDGYETMKRIRKDARHKDLTII--AVTAKAMKGDRQRCIESGASDYITKPVNVEQL 1256
Query: 140 KN---IW 143
+ +W
Sbjct: 1257 SSLMRVW 1263
>gi|301307888|ref|ZP_07213844.1| sigma-54 dependent DNA-binding response regulator [Bacteroides sp.
20_3]
gi|300834231|gb|EFK64845.1| sigma-54 dependent DNA-binding response regulator [Bacteroides sp.
20_3]
Length = 436
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 6/118 (5%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++L+V+D+I+ ++ + + Y+V T +A ++R K FD++LSDV +P+ DG
Sbjct: 4 KILIVEDNISLSQMQKDWFAQAGYDVVTAMNEPIARSLIR--KIQFDLILSDVRLPEGDG 61
Query: 95 FKLLEHIGLEM-DLP-VITDGRVSA--VMRGIRHGACDYLIKPIREEELKNIWQHVVR 148
LLE + E D+P +IT VS V+R I+ GA DYL KP+R+E L + + V R
Sbjct: 62 ISLLEWLRKERKDIPFIITTEYVSVPDVVRTIKLGAIDYLPKPVRKEHLLELAEDVFR 119
>gi|197122437|ref|YP_002134388.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. K]
gi|220917204|ref|YP_002492508.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-1]
gi|196172286|gb|ACG73259.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter sp. K]
gi|219955058|gb|ACL65442.1| response regulator receiver modulated metal dependent
phosphohydrolase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 357
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 75/153 (49%), Gaps = 17/153 (11%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P R+L+VDDD ++ +LR Y TT + A ALD RK + +V+SDV MP
Sbjct: 6 PEATRILIVDDDAAVRDVITVLLREEGYVCTTVASAEAALD--EARKTDYPLVISDVRMP 63
Query: 91 DMDGFKLLEHIG-LEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEEL-KNIWQH 145
DGF LLE + D VI G A + +R+GA DYL+KP + EL + I +
Sbjct: 64 ARDGFWLLEQMREASPDTAVIMLTAYGDTEAAVECLRNGAADYLLKPPKVTELIRAIERA 123
Query: 146 VVRKRWN----------ENKEHENSGSLEETDH 168
+ R+R EN+ E + L T H
Sbjct: 124 LGRRRLELARGRYRRSLENRVKEKTAELSRTLH 156
>gi|428209322|ref|YP_007093675.1| winged helix family two component transcriptional regulator
[Chroococcidiopsis thermalis PCC 7203]
gi|428011243|gb|AFY89806.1| two component transcriptional regulator, winged helix family
[Chroococcidiopsis thermalis PCC 7203]
Length = 242
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + ALD RK D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDTF--RKADPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
+ + + + E D+P+I G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|410099296|ref|ZP_11294268.1| hypothetical protein HMPREF1076_03446 [Parabacteroides goldsteinii
CL02T12C30]
gi|409219318|gb|EKN12281.1| hypothetical protein HMPREF1076_03446 [Parabacteroides goldsteinii
CL02T12C30]
Length = 372
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 71/118 (60%), Gaps = 8/118 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D AG VL+VDD T + +++ +L++ Y + TC A AL + ++ +++L D+
Sbjct: 2 DNLAAGYTVLIVDDVPTNVMLVQAILKKEGYKLLTCDSGAKALRLAHDKHP--NLILLDI 59
Query: 88 HMPDMDGFKLLEHIGLE---MDLPVITDGRVS---AVMRGIRHGACDYLIKPIREEEL 139
MP+MDG+++L+H+ D+PVI +S ++++G + GA +Y+ KP + EEL
Sbjct: 60 MMPEMDGYEVLQHLKSNPDTNDIPVIIMSALSDMQSIVKGYQLGATEYVTKPFQREEL 117
>gi|242082830|ref|XP_002441840.1| hypothetical protein SORBIDRAFT_08g003180 [Sorghum bicolor]
gi|241942533|gb|EES15678.1| hypothetical protein SORBIDRAFT_08g003180 [Sorghum bicolor]
Length = 462
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 60/106 (56%), Gaps = 9/106 (8%)
Query: 196 RISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVP 254
++S K D E +S + +KPR W+ ELH++F+ A+ QL G A PK+I ELM V
Sbjct: 252 KLSIKGGKDKEAQSSSQAPGRKPRRCWAPELHRRFLQALQQLGGSHAATPKQIRELMKVD 311
Query: 255 GLTRENVASHLQEINLQKFRLYLKRLN---GVSQQGGITNSFCAPI 297
GLT + V SH LQK+RL+ +R N V+ Q G T+ P
Sbjct: 312 GLTNDEVKSH-----LQKYRLHTRRPNSTTAVAVQSGGTSVVAPPT 352
>gi|416319542|ref|ZP_11662094.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O157:H7 str. EC1212]
gi|420300246|ref|ZP_14802290.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW09109]
gi|420312590|ref|ZP_14814510.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1738]
gi|424086743|ref|ZP_17823208.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA517]
gi|424099849|ref|ZP_17835081.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1985]
gi|424137293|ref|ZP_17869708.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA10]
gi|425106900|ref|ZP_18509195.1| transcriptional regulatory protein zraR [Escherichia coli 5.2239]
gi|425202557|ref|ZP_18598746.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
NE037]
gi|425297489|ref|ZP_18687592.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA38]
gi|444972242|ref|ZP_21289566.1| transcriptional regulatory protein zraR [Escherichia coli 99.1793]
gi|445047880|ref|ZP_21363114.1| transcriptional regulatory protein zraR [Escherichia coli 3.4880]
gi|320190898|gb|EFW65548.1| Response regulator of zinc sigma-54-dependent two-component system
[Escherichia coli O157:H7 str. EC1212]
gi|390637968|gb|EIN17497.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FDA517]
gi|390655575|gb|EIN33502.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
FRIK1985]
gi|390691573|gb|EIN66310.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA10]
gi|390805479|gb|EIO72424.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
TW09109]
gi|390897400|gb|EIP56729.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
EC1738]
gi|408112214|gb|EKH43883.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
NE037]
gi|408209946|gb|EKI34521.1| acetoacetate metabolism regulatory protein AtoC [Escherichia coli
PA38]
gi|408544317|gb|EKK21775.1| transcriptional regulatory protein zraR [Escherichia coli 5.2239]
gi|444575229|gb|ELV51478.1| transcriptional regulatory protein zraR [Escherichia coli 99.1793]
gi|444656713|gb|ELW29233.1| transcriptional regulatory protein zraR [Escherichia coli 3.4880]
Length = 441
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPI 134
L+ I L +PV+ S+V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|427735900|ref|YP_007055444.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Rivularia sp. PCC 7116]
gi|427370941|gb|AFY54897.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Rivularia sp. PCC 7116]
Length = 242
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T ALD RK D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALDTF--RKAIPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
+ + + + E D+P+I G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|373456903|ref|ZP_09548670.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Caldithrix abyssi DSM 13497]
gi|371718567|gb|EHO40338.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Caldithrix abyssi DSM 13497]
Length = 445
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 6/110 (5%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+VDDD L+ L+ +L Y V TC+ +ALD L +K + + DV MP +DG
Sbjct: 3 RILIVDDDEYFLQSLKNLLVYKKYEVETCANPIMALDYL--KKSTYHLAFLDVKMPGIDG 60
Query: 95 FKLLEHI-GLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELK 140
+LLE+I G D+ VI +S + I+ GA D++ KP+ E+L+
Sbjct: 61 LELLENIRGFNKDISVIMVSGQSTISIAVEAIKKGAFDFIEKPVDPEKLQ 110
>gi|159471197|ref|XP_001693743.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283246|gb|EDP08997.1| predicted protein [Chlamydomonas reinhardtii]
Length = 366
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP+ L VL++D D + +E L+ Y VT CS + A L++ FD++L+DV
Sbjct: 21 FPSDLSVLLLDPDFKARQEVEAQLKENNYAVTPCSCSFEAAAHLQDADKHFDLLLADVRC 80
Query: 90 PDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
+ + +P++ G + VM GI+ GA D+L KP+ +LKNIWQH+
Sbjct: 81 MQQQSAEHKAVVQAAKSIPLVLMSESGAPNEVMLGIKLGAVDFLEKPLSPLKLKNIWQHL 140
Query: 147 VRK 149
VR+
Sbjct: 141 VRR 143
>gi|356547128|ref|XP_003541969.1| PREDICTED: uncharacterized protein LOC100799064 [Glycine max]
Length = 400
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 13/118 (11%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH +F+ AVNQLG DKA PK +++LM +PGLT ++ SH LQ
Sbjct: 42 STDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSH-----LQ 96
Query: 272 KFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIPPQTLAALH 329
K+RL K L+G Q +T+ T +L + L+ + PQ LH
Sbjct: 97 KYRLS-KNLHG--QSNNVTHKITTSATTGERLSETNGTHMNKLS----LGPQANKDLH 147
>gi|326490261|dbj|BAJ84794.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 355
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 45/63 (71%), Gaps = 6/63 (9%)
Query: 219 RVVWSVELHQQFVSAVNQLGIDKAVPKRILELM-NVPGLTRENVASHLQEINLQKFRLYL 277
RV W+ ELH++FV AV QLG+DKAVP RILELM N LTR N+ASH LQK+R +
Sbjct: 53 RVDWTPELHRRFVQAVEQLGLDKAVPSRILELMGNEYRLTRHNIASH-----LQKYRSHR 107
Query: 278 KRL 280
K L
Sbjct: 108 KHL 110
>gi|255014974|ref|ZP_05287100.1| putative two-component system response regulator [Bacteroides sp.
2_1_7]
gi|256842153|ref|ZP_05547658.1| nitrogen regulation protein NR(I) [Parabacteroides sp. D13]
gi|298374982|ref|ZP_06984939.1| sigma-54 dependent DNA-binding response regulator [Bacteroides sp.
3_1_19]
gi|410105314|ref|ZP_11300222.1| hypothetical protein HMPREF0999_03994 [Parabacteroides sp. D25]
gi|256736469|gb|EEU49798.1| nitrogen regulation protein NR(I) [Parabacteroides sp. D13]
gi|298267482|gb|EFI09138.1| sigma-54 dependent DNA-binding response regulator [Bacteroides sp.
3_1_19]
gi|409232524|gb|EKN25370.1| hypothetical protein HMPREF0999_03994 [Parabacteroides sp. D25]
Length = 436
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 6/118 (5%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++L+V+D+I+ ++ + + Y+V T +A ++R K FD++LSDV +P+ DG
Sbjct: 4 KILIVEDNISLSQMQKDWFAQAGYDVVTAMNEPIARSLIR--KIQFDLILSDVRLPEGDG 61
Query: 95 FKLLEHIGLEM-DLP-VITDGRVSA--VMRGIRHGACDYLIKPIREEELKNIWQHVVR 148
LLE + E D+P +IT VS V+R I+ GA DYL KP+R+E L + + V R
Sbjct: 62 ISLLEWLRKERKDIPFIITTEYVSVPDVVRTIKLGAIDYLPKPVRKEHLLELAEDVFR 119
>gi|297813157|ref|XP_002874462.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
gi|297320299|gb|EFH50721.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
Length = 414
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Query: 193 QRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELM 251
Q++ +S++++ G+ S +T+K+ R+ W+ ELH+ FV AVNQLG ++A PK +L+L+
Sbjct: 209 QQQVVSSEDQLSGKNSSSSVATSKQ-RMRWTPELHEAFVEAVNQLGGSERATPKAVLKLL 267
Query: 252 NVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITN 291
N+PGLT +V SHLQ+ +++ + G Q+ +T+
Sbjct: 268 NIPGLTIYHVKSHLQKYRTARYKPDTSEVTGEPQEKNMTS 307
>gi|20807567|ref|NP_622738.1| chemotaxis protein CheY [Thermoanaerobacter tengcongensis MB4]
gi|20516103|gb|AAM24342.1| CheY-like receiver domains [Thermoanaerobacter tengcongensis MB4]
Length = 267
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 64/110 (58%), Gaps = 6/110 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDD + +++ +L YNV + + A+ ++ RK FD+++ D+++PD +GF
Sbjct: 10 ILVVDDSVLIRLMVKDILGGEGYNVVAAATSEEAVRKIKSRKELFDLIIVDINLPDQNGF 69
Query: 96 KLLEHIGLE---MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEEL 139
+ + ++ E +PVI D V ++ R + GA DYL+KP + EEL
Sbjct: 70 EFIRNLKSEEKYRHIPVIILSIDATVPSIKRAVEAGAVDYLVKPFKAEEL 119
>gi|86606063|ref|YP_474826.1| DNA-binding response regulator [Synechococcus sp. JA-3-3Ab]
gi|86554605|gb|ABC99563.1| DNA-binding response regulator [Synechococcus sp. JA-3-3Ab]
Length = 243
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 70/118 (59%), Gaps = 5/118 (4%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+LVVDD+ + RILE L Y+V T + AL++ R++ D+V+ DV MP +DG
Sbjct: 8 RILVVDDEASIRRILETRLSMIGYDVVTAADGEEALEVFRKQDP--DLVVLDVMMPKLDG 65
Query: 95 FKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
+ + + + E D+P+I G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 66 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 123
>gi|298248600|ref|ZP_06972405.1| multi-sensor signal transduction histidine kinase [Ktedonobacter
racemifer DSM 44963]
gi|297551259|gb|EFH85125.1| multi-sensor signal transduction histidine kinase [Ktedonobacter
racemifer DSM 44963]
Length = 1036
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 64/106 (60%), Gaps = 8/106 (7%)
Query: 35 RVLVVDDDITCLRILEQ--MLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
R+L+VDDD+ L+ L + MLR +V T S A AL L+ R+ +DVV+SD+ MP M
Sbjct: 32 RILLVDDDMAALQALSRTFMLRMSDVDVDTSSSALDALAQLQSRE--YDVVVSDIKMPMM 89
Query: 93 DGFKLLEHIGLEM-DLPVIT---DGRVSAVMRGIRHGACDYLIKPI 134
DG +LL +I M D+PV+ G M+ ++ GA DY +KPI
Sbjct: 90 DGIQLLSNIHKRMPDIPVLLITGHGEHELAMQALQEGAYDYTLKPI 135
>gi|224370797|ref|YP_002604961.1| two-component system transcriptional regulator [Desulfobacterium
autotrophicum HRM2]
gi|223693514|gb|ACN16797.1| predicted two-component system transcriptional regulator
[Desulfobacterium autotrophicum HRM2]
Length = 498
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 73/120 (60%), Gaps = 8/120 (6%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERK-GCFDVVLSDVHMPDMDG 94
+LVVDD+ L + E+ R Y+V T A++I+++ K GC +D++MP+MDG
Sbjct: 9 ILVVDDEEGILDVSEEYFERKGYDVYTARNGIEAIEIIKQVKIGC---CFTDINMPEMDG 65
Query: 95 FKLLEHI-GLEMDLP-VITDGRVSA--VMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 150
+L E I G++ LP VI G S +R +++G D+L+KP+ E+++ ++ ++R+R
Sbjct: 66 LELAERIRGIDNTLPIVIMTGYPSLDNTIRTLKNGVVDFLVKPVNLEQMELSYKRIIRER 125
>gi|152997453|ref|YP_001342288.1| two component sigma-54-specific Fis family transcriptional
regulator [Marinomonas sp. MWYL1]
gi|150838377|gb|ABR72353.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Marinomonas sp. MWYL1]
Length = 448
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 73/129 (56%), Gaps = 13/129 (10%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYN---VTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
+++L+V+DD LE L Y V + +A VAL + FD+V+SDV++P
Sbjct: 4 VKLLIVEDDKGLAEALEDTLMLASYQCKIVYSSEEAVVAL-----KHSLFDMVISDVNLP 58
Query: 91 DMDGFKLLEH-IGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKN-IWQH 145
MDG+ LL H I +LP++ G ++ + +R GA DYL+KP +EEEL N I ++
Sbjct: 59 GMDGYGLLHHVIDTYPELPMMLMTAYGDIAHAVEAMRDGAVDYLLKPFQEEELLNAIAKY 118
Query: 146 VVRKRWNEN 154
V++ + N
Sbjct: 119 TVKEAPSAN 127
>gi|224368210|ref|YP_002602373.1| sigma-54 dependent transcriptional regulator [Desulfobacterium
autotrophicum HRM2]
gi|223690926|gb|ACN14209.1| sigma-54 dependent transcriptional regulator [Desulfobacterium
autotrophicum HRM2]
Length = 455
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++L+VDD+ IL ++L+ Y T S A +ALDIL + C D+VLSDV+MP MDG
Sbjct: 3 KILIVDDEKNYPTILGEVLKEEGYTPVTASSALMALDILND--DCIDLVLSDVNMPGMDG 60
Query: 95 FKLLEHIG-LEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEEL 139
+LLE I + + PVI G V + + GA Y++KP + L
Sbjct: 61 IELLEKIKEITPNTPVIVMTAYGSVEKAVDAMHKGAYTYILKPFENDTL 109
>gi|295913655|gb|ADG58070.1| transcription factor [Lycoris longituba]
Length = 151
Score = 70.1 bits (170), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 51/69 (73%)
Query: 203 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVA 262
D+ LE S ++ R+VW+ +LH++F+ + +LG +AVPK+I+E+MNV GLTRE+VA
Sbjct: 75 DEEVLEGSCSSRNQRRRLVWTPQLHKRFLDVMARLGSKEAVPKKIMEMMNVEGLTREHVA 134
Query: 263 SHLQEINLQ 271
SHLQ+ ++
Sbjct: 135 SHLQKYQMK 143
>gi|52783218|sp|O23100.2|APRR8_ARATH RecName: Full=Putative two-component response regulator-like APRR8;
AltName: Full=Pseudo-response regulator 8
Length = 367
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 37/233 (15%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
++F + VL++D D TCL L +M+R+C Y V ++A I+ + D+VL++
Sbjct: 8 ERFSNDICVLLLDSDATCLANLSEMIRKCGYKVVATTRADDLPLIINNKDKKIDLVLAEF 67
Query: 88 HMPDMDGFKLLEHIGLEMDLPVITDGR--VSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
+ +M+ ++LLE I ++PV+ G A++ + GA L KP+ E + K +WQ
Sbjct: 68 RLIEMNKYELLEKIRSICEIPVVVSGAHVKDAIVECLCRGAKLCLEKPLMENDFKILWQF 127
Query: 146 VVRKRWN------------------------ENKEHENSGSLEETDHHKRGSDEIEYASS 181
V ++ N E K++ N+ +E D K Y
Sbjct: 128 TVSRQRNFRSQIDINPPEKNHSITHTQSLGAELKKNNNNSEVETEDLDK-------YKDE 180
Query: 182 VNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAV 234
+ +G + +A E+++G D KKP+++++ +L + + AV
Sbjct: 181 LGQGNKRKERADTDTGEHTEKNNG----SDLGDQKKPKLLFADDLQNETLEAV 229
>gi|147861344|emb|CAN83993.1| hypothetical protein VITISV_039545 [Vitis vinifera]
Length = 191
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 14/118 (11%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
RVL+V++D + ++ +LR C Y VT S A IL++ D+VL++V++P +
Sbjct: 59 RVLLVENDDSTRYVIGALLRNCGYQVTETSNGLQAWRILKDXSNHIDLVLTEVNLPRLSV 118
Query: 95 FKLLEHIGLEMDLPVITDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWN 152
+ L V++ + GA D+L+KP R+ ELK +WQH+ R+R N
Sbjct: 119 MSTXDSGAL--------------VLKCLSKGATDFLVKPXRKNELKFLWQHIWRRRQN 162
>gi|302873857|ref|YP_003842490.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
gi|307689897|ref|ZP_07632343.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
gi|302576714|gb|ADL50726.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
Length = 366
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 75/133 (56%), Gaps = 9/133 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+++LVVDD ++I+ +L+ YN+ + + AL++++ + F+++L DV MP+MD
Sbjct: 7 IKILVVDDTPFNIKIVSTILQEVGYNIYSTTSGREALEMVKNIR--FNLILLDVMMPEMD 64
Query: 94 GFKLLEHIGLE---MDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEE-LKNIWQHV 146
G++++ + + D+P+I G +V+R GA DYLIKP +E L + H+
Sbjct: 65 GYEVIRKLKNDEDTRDIPIIFLTARGDSESVVRAFDEGAYDYLIKPFNPKELLSRVKTHI 124
Query: 147 VRKRWNENKEHEN 159
K EN E N
Sbjct: 125 ELKFARENLEEAN 137
>gi|121595866|ref|YP_987762.1| CheA signal transduction histidine kinase [Acidovorax sp. JS42]
gi|120607946|gb|ABM43686.1| CheA signal transduction histidine kinase [Acidovorax sp. JS42]
Length = 2026
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 12/139 (8%)
Query: 14 SGYGSSRAADVAVP-DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
+ G + AA + VP Q P +LVVDD IT R+ +++L+R Y V + AL+
Sbjct: 1882 AAEGGTPAASLLVPVQQVPL---ILVVDDSITVRRVTQRLLQREGYRVALAADGLQALER 1938
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLE---MDLPVI-TDGRVSAVMR--GIRHGA 126
L+E + VVLSD+ MP MDGF L +I + DLP+I R++ R + G
Sbjct: 1939 LQEERPA--VVLSDIEMPRMDGFDLARNIRSDAALQDLPIIMITSRIAQKHRDHAMELGV 1996
Query: 127 CDYLIKPIREEELKNIWQH 145
YL KP +EEL ++ +H
Sbjct: 1997 NHYLGKPYSDEELMSLVRH 2015
>gi|222112067|ref|YP_002554331.1| chea signal transduction histidine kinase [Acidovorax ebreus TPSY]
gi|221731511|gb|ACM34331.1| CheA signal transduction histidine kinase [Acidovorax ebreus TPSY]
Length = 2026
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 12/139 (8%)
Query: 14 SGYGSSRAADVAVP-DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDI 72
+ G + AA + VP Q P +LVVDD IT R+ +++L+R Y V + AL+
Sbjct: 1882 AAEGGTPAASLLVPVQQVPL---ILVVDDSITVRRVTQRLLQREGYRVALAADGLQALER 1938
Query: 73 LRERKGCFDVVLSDVHMPDMDGFKLLEHIGLE---MDLPVI-TDGRVSAVMR--GIRHGA 126
L+E + VVLSD+ MP MDGF L +I + DLP+I R++ R + G
Sbjct: 1939 LQEERPA--VVLSDIEMPRMDGFDLARNIRSDAALQDLPIIMITSRIAQKHRDHAMELGV 1996
Query: 127 CDYLIKPIREEELKNIWQH 145
YL KP +EEL ++ +H
Sbjct: 1997 NHYLGKPYSDEELMSLVRH 2015
>gi|356543598|ref|XP_003540247.1| PREDICTED: uncharacterized protein LOC100810396 [Glycine max]
Length = 420
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH +F+ AVNQLG DKA PK +++LM +PGLT ++ SHLQ+ L
Sbjct: 42 STDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS 101
Query: 272 K 272
K
Sbjct: 102 K 102
>gi|434391939|ref|YP_007126886.1| two component transcriptional regulator, winged helix family
[Gloeocapsa sp. PCC 7428]
gi|428263780|gb|AFZ29726.1| two component transcriptional regulator, winged helix family
[Gloeocapsa sp. PCC 7428]
Length = 242
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T + ALD RK D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAADGEEALDTF--RKAQPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
+ + + + E D+P+I G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|414591290|tpg|DAA41861.1| TPA: hypothetical protein ZEAMMB73_323779 [Zea mays]
Length = 657
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Query: 60 VTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHI---GLEMDLPVI---TDG 113
V + A L ++ D+VL++V MP + G LL I + ++PVI +
Sbjct: 37 VISAKNGQQAWAYLEDKGNNIDLVLTEVFMPGVSGISLLSRIMRHNIFKNIPVIMMSSSD 96
Query: 114 RVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 150
+S V + + GA D+L+KPIR+ ELKN+WQHV R+R
Sbjct: 97 DMSTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRQR 133
>gi|319956809|ref|YP_004168072.1| winged helix family two component transcriptional regulator
[Nitratifractor salsuginis DSM 16511]
gi|319419213|gb|ADV46323.1| two component transcriptional regulator, winged helix family
[Nitratifractor salsuginis DSM 16511]
Length = 223
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 6/116 (5%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +++L+V+DD+ L LR ++V T AL L++ +D++L DV++PD
Sbjct: 5 SKVKILLVEDDVETSEFLSTFLRDSGFDVDTVFSVTDALSHLKQ--NPYDILLLDVNLPD 62
Query: 92 MDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELK-NIW 143
G +LL+ I E+ LP I G + + R+GA DY++KPI EEL+ IW
Sbjct: 63 YSGMELLKSIKGELSLPTIILSAYGDTRSKIMAFRYGATDYMVKPIDLEELEARIW 118
>gi|291000634|ref|XP_002682884.1| type-B response regulator [Naegleria gruberi]
gi|284096512|gb|EFC50140.1| type-B response regulator [Naegleria gruberi]
Length = 519
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Query: 217 KPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLY 276
K R+VW+ ELH FV AV+QLG+++A PK ILELMN+P LT ++ SH LQK+R
Sbjct: 235 KKRLVWTNELHDLFVKAVSQLGLNEARPKEILELMNLPDLTTTHIKSH-----LQKYRQQ 289
Query: 277 LKR 279
+K+
Sbjct: 290 VKK 292
>gi|421847857|ref|ZP_16280987.1| transcriptional regulatory protein ZraR [Citrobacter freundii ATCC
8090 = MTCC 1658]
gi|411770738|gb|EKS54487.1| transcriptional regulatory protein ZraR [Citrobacter freundii ATCC
8090 = MTCC 1658]
Length = 441
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR Y V AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWSYEVALAYSGRAALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPIREEELKNIWQHVV 147
L+ I L +PV+ S+V + ++ GA DYLIKP+ + L+ + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAFSSVETAVEALKTGALDYLIKPLDFDRLQETLEKAL 121
>gi|297598674|ref|NP_001046045.2| Os02g0174000 [Oryza sativa Japonica Group]
gi|49388972|dbj|BAD26189.1| myb family transcription factor-like [Oryza sativa Japonica Group]
gi|255670643|dbj|BAF07959.2| Os02g0174000 [Oryza sativa Japonica Group]
Length = 355
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
Query: 203 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENV 261
D G + + DP KPR+ W+VELH++FV AV QL G DKA PK I+ +M V GLT ++
Sbjct: 6 DSGLVLTTDP----KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHL 61
Query: 262 ASHLQEINLQK 272
SHLQ+ L K
Sbjct: 62 KSHLQKFRLGK 72
>gi|170077111|ref|YP_001733749.1| two-component response regulator (ycf27) [Synechococcus sp. PCC
7002]
gi|169884780|gb|ACA98493.1| two-component response regulator (ycf27) [Synechococcus sp. PCC
7002]
Length = 258
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 70/133 (52%), Gaps = 7/133 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL-RERKGCFDVVLSDVHMPDMDG 94
+LVVDD+I RIL+ L Y++ T + ALDI RE D+V+ DV MP DG
Sbjct: 16 ILVVDDEIAVRRILQTRLSMIGYDIITAADGDEALDIFWREDP---DLVILDVMMPKRDG 72
Query: 95 FKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRW 151
+ + + I E P+I G V+ + G+R GA DYLIKP +EL+ Q ++R+
Sbjct: 73 YYVCQEIRRESSTPIIMLTALGDVADRITGLRFGADDYLIKPFSPKELEVRIQCILRRTQ 132
Query: 152 NENKEHENSGSLE 164
E +G L
Sbjct: 133 KTLPPTEEAGILR 145
>gi|320354561|ref|YP_004195900.1| Fis family two component sigma54 specific transcriptional regulator
[Desulfobulbus propionicus DSM 2032]
gi|320123063|gb|ADW18609.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfobulbus propionicus DSM 2032]
Length = 460
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 6/119 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDD+++ L+ +L + Y V T + AL+ R K FD+V++D+ MP M G
Sbjct: 6 ILVVDDELSMREFLKILLEKEGYQVATAADGQAALE--RAEKTAFDLVITDIRMPGMSGL 63
Query: 96 KLLEHIG-LEMDLPVITDGRVSA---VMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 150
LL + L+ D+ VI ++ + ++ GA DY+ KP +E+K + + V++KR
Sbjct: 64 DLLARLKQLQADIGVIMITAFASPDDAVTAMKSGAFDYITKPFNVDEIKTVIRAVLKKR 122
>gi|414077097|ref|YP_006996415.1| two-component response regulator [Anabaena sp. 90]
gi|413970513|gb|AFW94602.1| two-component response regulator [Anabaena sp. 90]
Length = 242
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T AL+I RK D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALEIF--RKAEPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
+ + + + E D+P+I G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|440682389|ref|YP_007157184.1| two component transcriptional regulator, winged helix family
[Anabaena cylindrica PCC 7122]
gi|428679508|gb|AFZ58274.1| two component transcriptional regulator, winged helix family
[Anabaena cylindrica PCC 7122]
Length = 242
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T AL+I RK D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALEIF--RKAEPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
+ + + + E D+P+I G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|356495976|ref|XP_003516846.1| PREDICTED: uncharacterized protein LOC100819750 [Glycine max]
Length = 379
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 61/112 (54%), Gaps = 21/112 (18%)
Query: 196 RISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVP 254
R+ K+E+ G+ + +K R WS ELH++F+ A+ QLG D A PK+I ELM V
Sbjct: 197 RVENKKEEKGQAQ-------RKQRRCWSQELHKRFLHALQQLGGADSATPKQIRELMKVD 249
Query: 255 GLTRENVASHLQEINLQKFRLYLKR----LNGVSQQGG----ITNSFCAPIE 298
GLT + V SH LQKFRL+ +R N S Q G + N F P E
Sbjct: 250 GLTNDEVKSH-----LQKFRLHTRRSPIIHNNASSQAGPLFLVGNIFVQPPE 296
>gi|406895984|gb|EKD40397.1| sigma-54 dependent DNA-binding response regulator (NtrC-type
regulator), partial [uncultured bacterium]
Length = 202
Score = 69.7 bits (169), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
R+L+VDDD L +LE L+ Y V + ALD+L+ + DV++SD+ MP+M G
Sbjct: 6 RILIVDDDQNILEVLEARLQAAGYRVYRAASGPAALDLLKSKP--VDVLVSDMKMPEMSG 63
Query: 95 FKL-LEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEEL 139
+L +E + ++ LPVI G + + ++ GA DYL KP +EL
Sbjct: 64 MELFVEAVAIQPQLPVIFLTAYGTIPDAVTAVKAGAVDYLTKPFDGKEL 112
>gi|395764182|ref|ZP_10444851.1| response regulator receiver modulated PAS/PAC sensor-containing
diguanylate cyclase/phosphodiesterase [Janthinobacterium
lividum PAMC 25724]
Length = 736
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 74/133 (55%), Gaps = 12/133 (9%)
Query: 25 AVPDQFPAGLRVLVVDDDITCLRILEQMLR---RCLYNVTTCSQAAVALDILRERKGCFD 81
A+P R+L+VDD+ L L ++L+ LY T S+A L LR FD
Sbjct: 7 AIPFDLKNSPRILLVDDEPRLLASLHELLKDRGYQLYTATCGSEALAQLSKLR-----FD 61
Query: 82 VVLSDVHMPDMDGFKLLEHI---GLEMDLPVIT-DGRVSAVMRGIRHGACDYLIKPIREE 137
++L D+ +PDM G ++++HI G+E D+ V++ D + A + ++ GA DYL KP E
Sbjct: 62 LILLDLRLPDMSGHEIMDHINRRGIEGDVIVMSGDVGIEAAIGALKRGAYDYLRKPYSRE 121
Query: 138 ELKNIWQHVVRKR 150
EL ++ ++KR
Sbjct: 122 ELLKTVENALQKR 134
>gi|297566260|ref|YP_003685232.1| CheA signal transduction histidine kinase [Meiothermus silvanus DSM
9946]
gi|296850709|gb|ADH63724.1| CheA signal transduction histidine kinase [Meiothermus silvanus DSM
9946]
Length = 934
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 17/140 (12%)
Query: 21 AADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCF 80
AA + P GL++L+VDD ++ R++ QML R + V T AL++L++ + +
Sbjct: 799 AAAGSAPTPLEHGLKILMVDDSLSIRRVVGQMLTRWGHQVHTAGDGYEALELLQDNR--Y 856
Query: 81 DVVLSDVHMPDMDGFKLLEHIGLEMDL---PVITDGRVSAVMRGIRH-------GACDYL 130
DVV++D+ MP ++GF+LL+ + DL PV V G +H GA YL
Sbjct: 857 DVVITDLEMPRVNGFELLDEVRRRPDLRETPVF----VLTSRAGEKHQALAAELGARGYL 912
Query: 131 IKPIREEELKNIWQHVVRKR 150
KP+ E +L+++ V+KR
Sbjct: 913 TKPLEETKLQSLLS-TVKKR 931
>gi|254230528|ref|ZP_04923899.1| signal transduction histidine-protein kinase BarA [Vibrio sp. Ex25]
gi|262393275|ref|YP_003285129.1| BarA sensory histidine kinase [Vibrio sp. Ex25]
gi|451972093|ref|ZP_21925305.1| signal transduction histidine-protein kinase BarA [Vibrio
alginolyticus E0666]
gi|151936953|gb|EDN55840.1| signal transduction histidine-protein kinase BarA [Vibrio sp. Ex25]
gi|262336869|gb|ACY50664.1| BarA sensory histidine kinase [Vibrio sp. Ex25]
gi|451931931|gb|EMD79613.1| signal transduction histidine-protein kinase BarA [Vibrio
alginolyticus E0666]
Length = 932
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 68/138 (49%), Gaps = 17/138 (12%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L VL VDD+ L+++ +LR + VT CS A+++ E+K +D++ D+ MP MD
Sbjct: 668 LTVLAVDDNPANLKLISALLRERVETVTACSNGQQAVNLATEKK--YDLIFMDIQMPQMD 725
Query: 94 GFKLLEHIG---LEMDLPVITDGRVSAVMRGIRH-----GACDYLIKPIREEELKNIWQH 145
G +HI L D PVI + M G R G DYL KPI E L+ + H
Sbjct: 726 GVTACQHIKELELNKDTPVI--AVTAHAMAGERDRLLSAGMDDYLTKPIEEHVLQQVLVH 783
Query: 146 VVRKRWNENKEHENSGSL 163
WN N E+ G +
Sbjct: 784 -----WNPNACTESIGKV 796
>gi|357453081|ref|XP_003596817.1| Two-component response regulator ARR18 [Medicago truncatula]
gi|355485865|gb|AES67068.1| Two-component response regulator ARR18 [Medicago truncatula]
gi|388517363|gb|AFK46743.1| unknown [Medicago truncatula]
Length = 389
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
ST KPR+ W+ +LH +F+ AVNQLG DKA PK +++LM +PGLT ++ SHLQ+ L
Sbjct: 41 STDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS 100
Query: 272 K 272
K
Sbjct: 101 K 101
>gi|427729957|ref|YP_007076194.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Nostoc sp. PCC 7524]
gi|427365876|gb|AFY48597.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Nostoc sp. PCC 7524]
Length = 242
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T ALD RK D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALDTF--RKADPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
+ + + + E D+P+I G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|386813570|ref|ZP_10100794.1| two-component response regulator [planctomycete KSU-1]
gi|386403067|dbj|GAB63675.1| two-component response regulator [planctomycete KSU-1]
Length = 477
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
++ DD+ T I+ + L R Y VT C+ A L ++ER FDVV+ D+ MP MDG
Sbjct: 35 IIFTDDEDTFRNIMAKELSRMGYKVTCCASGAETLKNMQERD--FDVVILDITMPGMDGI 92
Query: 96 KLLEHIG-LEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 150
+ L I LE VI G + ++ I+ GA DYL KP R EL + Q + KR
Sbjct: 93 ETLRKIKDLESTTEVIILTGQGTIENAVQAIKSGAYDYLTKPCRLHELDVLLQKALEKR 151
>gi|374704432|ref|ZP_09711302.1| two component sigma-54 specific Fis family transcriptional
regulator [Pseudomonas sp. S9]
Length = 447
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 72/128 (56%), Gaps = 10/128 (7%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDIL-RERKGCFDVVLSDVHMPDMDG 94
VLVVDD++ ++Q L ++V TCS AA AL ++ R+ G V++SDV MP DG
Sbjct: 5 VLVVDDEVAIREAVQQWLELSGFSVQTCSSAAQALALVDRDFPG---VIISDVRMPGTDG 61
Query: 95 FKLLEH-IGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 150
+LLE I L+ DLPVI G V ++ + GA D++ KP E L + + + KR
Sbjct: 62 LQLLEKLIELDRDLPVIMVTGHGDVPMAVQALHRGAYDFIEKPFTPERLLDSVRRALEKR 121
Query: 151 W--NENKE 156
EN+E
Sbjct: 122 RLVCENRE 129
>gi|425856112|gb|AFX97564.1| PRR95, partial [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 8/78 (10%)
Query: 80 FDVVLSDVHMPDMDGFKLLEHIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIK 132
D+VL++V +P M GF LL I +E D +PVI ++ VS V + + GA D+L+K
Sbjct: 1 IDLVLTEVELPSMSGFLLLSTI-MEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVK 59
Query: 133 PIREEELKNIWQHVVRKR 150
PIR+ EL+N+WQHV RK+
Sbjct: 60 PIRKNELRNLWQHVWRKQ 77
>gi|239052139|ref|NP_001131917.2| uncharacterized protein LOC100193306 [Zea mays]
gi|238908627|gb|ACF80541.2| unknown [Zea mays]
gi|413916111|gb|AFW56043.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 174 DEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSA 233
D + A + + T+ + ++ + +L S PS +K R W+ ELH++F+ A
Sbjct: 234 DSCDRAGATDTDTDTAENNKASSTKGGKDKEAQLSSQAPS--RKARRCWAPELHRRFLQA 291
Query: 234 VNQLGIDK-AVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ--QGGIT 290
+ QLG A PK+I ELMNV GLT + V SH LQK+RL+ +R N + Q G T
Sbjct: 292 LQQLGGSHVATPKQIRELMNVDGLTNDEVKSH-----LQKYRLHTRRPNSAAAAVQSGGT 346
Query: 291 NSFCAPIETN-VKLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPTGNLVTAVDQ 346
+ P V +G + + AA+ P Q +H L G +G TA D+
Sbjct: 347 SVVAPPAAPQFVVVGGIWVPPPEYAAAAAAQPQQ----VHVHLAGDASGTTTTAADK 399
>gi|395005574|ref|ZP_10389449.1| chemotaxis protein histidine kinase-like protein [Acidovorax sp.
CF316]
gi|394316501|gb|EJE53225.1| chemotaxis protein histidine kinase-like protein [Acidovorax sp.
CF316]
Length = 2092
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDD IT R+ +++L+R Y V + AL+ L++ + VVLSD+ MP MDGF
Sbjct: 1969 ILVVDDSITVRRVTQRLLQREGYRVALAADGLQALERLQDERPT--VVLSDIEMPRMDGF 2026
Query: 96 KLLEHI---GLEMDLPVI-TDGRVSAVMR--GIRHGACDYLIKPIREEELKNIWQH 145
L +I G DLP+I R++ R + G YL KP +EEL ++ QH
Sbjct: 2027 DLARNIRADGALRDLPIIMITSRIAEKHREHAMELGVNHYLGKPYSDEELLSLIQH 2082
>gi|206891080|ref|YP_002248567.1| FrgC [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206743018|gb|ACI22075.1| FrgC [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 139
Score = 69.3 bits (168), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 67/110 (60%), Gaps = 7/110 (6%)
Query: 35 RVLVVDDDITCLRILEQMLR-RCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++L+VDD+ L++L +LR + Y +TT + A+++ +KG FD+V++D+ MP +D
Sbjct: 4 KILIVDDEPDMLKLLSMILREKTPYEITTTNNPIEAVEL--AKKGDFDLVITDLKMPGLD 61
Query: 94 GFKLLEHI-GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEEL 139
G +LLE + + D+PVI G + A I G D++ KP ++E++
Sbjct: 62 GLQLLEEVKKRDEDVPVIIITAYGTIDAATEAIEKGGFDFITKPFKKEQI 111
>gi|425856110|gb|AFX97563.1| PRR95, partial [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 8/78 (10%)
Query: 80 FDVVLSDVHMPDMDGFKLLEHIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIK 132
D+VL++V +P M GF LL I +E D +PVI ++ VS V + + GA D+L+K
Sbjct: 1 IDLVLTEVELPSMSGFLLLSTI-MEHDACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVK 59
Query: 133 PIREEELKNIWQHVVRKR 150
PIR+ EL+N+WQHV RK+
Sbjct: 60 PIRKNELRNLWQHVWRKQ 77
>gi|319764295|ref|YP_004128232.1| response regulator receiver [Alicycliphilus denitrificans BC]
gi|317118856|gb|ADV01345.1| response regulator receiver [Alicycliphilus denitrificans BC]
Length = 1947
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 70/141 (49%), Gaps = 21/141 (14%)
Query: 23 DVAVPDQFPAGLR-----VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERK 77
+ VP Q PA VLVVDD IT R+ +++L+R Y V + AL+ L++ +
Sbjct: 1805 EAGVPAQAPAAQDHQVPLVLVVDDSITVRRVTQRLLQREGYRVALAADGLQALERLQQER 1864
Query: 78 GCFDVVLSDVHMPDMDGFKLLEHI---GLEMDLPVIT-------DGRVSAVMRGIRHGAC 127
VVLSD+ MP MDGF L +I DLP+I R A G+ H
Sbjct: 1865 PA--VVLSDIEMPRMDGFDLARNIRGDAALRDLPIIMITSRIAQKHRDHAAQLGVNH--- 1919
Query: 128 DYLIKPIREEELKNIWQHVVR 148
YL KP +EEL ++ +H R
Sbjct: 1920 -YLGKPYSDEELMSLVRHYAR 1939
>gi|82778820|ref|YP_405169.1| transcriptional regulatory protein ZraR [Shigella dysenteriae
Sd197]
gi|309783961|ref|ZP_07678606.1| transcriptional regulatory protein zraR [Shigella dysenteriae 1617]
gi|81242968|gb|ABB63678.1| sensor HydH response regulator of hydrogenase 3 activity [Shigella
dysenteriae Sd197]
gi|308928332|gb|EFP73794.1| transcriptional regulatory protein zraR [Shigella dysenteriae 1617]
Length = 441
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 6/103 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSERQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPI 134
L+ I L+ +PV+ S+V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALKPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|421778340|ref|ZP_16214917.1| response regulator receiver domain protein [Escherichia coli AD30]
gi|408456570|gb|EKJ80384.1| response regulator receiver domain protein [Escherichia coli AD30]
Length = 441
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 6/103 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + L+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQTLEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPI 134
L+ I L +PV+ S+V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>gi|357510131|ref|XP_003625354.1| Two-component response regulator ARR [Medicago truncatula]
gi|355500369|gb|AES81572.1| Two-component response regulator ARR [Medicago truncatula]
Length = 489
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
S T KPR+ W+ ELH+ FV AVNQL G ++A PK +L+LM V GLT +V SHLQ+
Sbjct: 258 SATTKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTA 317
Query: 272 KFR 274
++R
Sbjct: 318 RYR 320
>gi|330826422|ref|YP_004389725.1| CheA signal transduction histidine kinase [Alicycliphilus
denitrificans K601]
gi|329311794|gb|AEB86209.1| CheA signal transduction histidine kinase [Alicycliphilus
denitrificans K601]
Length = 1947
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 70/141 (49%), Gaps = 21/141 (14%)
Query: 23 DVAVPDQFPAGLR-----VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERK 77
+ VP Q PA VLVVDD IT R+ +++L+R Y V + AL+ L++ +
Sbjct: 1805 EAGVPAQAPAAQDHQVPLVLVVDDSITVRRVTQRLLQREGYRVALAADGLQALERLQQER 1864
Query: 78 GCFDVVLSDVHMPDMDGFKLLEHI---GLEMDLPVIT-------DGRVSAVMRGIRHGAC 127
VVLSD+ MP MDGF L +I DLP+I R A G+ H
Sbjct: 1865 PA--VVLSDIEMPRMDGFDLARNIRGDAALRDLPIIMITSRIAQKHRDHAAQLGVNH--- 1919
Query: 128 DYLIKPIREEELKNIWQHVVR 148
YL KP +EEL ++ +H R
Sbjct: 1920 -YLGKPYSDEELMSLVRHYAR 1939
>gi|455644043|gb|EMF23157.1| transcriptional regulatory protein ZraR [Citrobacter freundii GTC
09479]
Length = 441
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR Y V AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYEVALAYSGRAALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPIREEELKNIWQHVV 147
L+ I L +PV+ S+V + ++ GA DYLIKP+ + L+ + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAFSSVETAVEALKTGALDYLIKPLDFDRLQETLEKAL 121
>gi|357510133|ref|XP_003625355.1| Two-component response regulator ARR [Medicago truncatula]
gi|355500370|gb|AES81573.1| Two-component response regulator ARR [Medicago truncatula]
Length = 468
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
S T KPR+ W+ ELH+ FV AVNQL G ++A PK +L+LM V GLT +V SHLQ+
Sbjct: 237 SATTKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTA 296
Query: 272 KFR 274
++R
Sbjct: 297 RYR 299
>gi|17231314|ref|NP_487862.1| two-component response regulator [Nostoc sp. PCC 7120]
gi|17132956|dbj|BAB75521.1| two-component response regulator [Nostoc sp. PCC 7120]
Length = 242
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y+V T ALD RK D+V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLSMIGYDVVTAGDGEEALDTF--RKSDPDLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
+ + + + E D+P+I G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSVLRR 122
>gi|395230619|ref|ZP_10408922.1| transcriptional regulatory protein ZraR [Citrobacter sp. A1]
gi|424733329|ref|ZP_18161890.1| sensory kinase in two component regulatory system with [Citrobacter
sp. L17]
gi|394715703|gb|EJF21495.1| transcriptional regulatory protein ZraR [Citrobacter sp. A1]
gi|422892324|gb|EKU32186.1| sensory kinase in two component regulatory system with [Citrobacter
sp. L17]
Length = 441
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR Y V AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYEVALAYSGRAALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPIREEELKNIWQHVV 147
L+ I L +PV+ S+V + ++ GA DYLIKP+ + L+ + +
Sbjct: 66 ATLKEIKALNPAIPVLIMTAFSSVETAVEALKTGALDYLIKPLDFDRLQETLEKAL 121
>gi|413935772|gb|AFW70323.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 376
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 213 STTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQEINLQ 271
+T KPR+ W+VELH++FV AV QL G DKA PK I+ +M V GLT ++ SHLQ+ L
Sbjct: 41 TTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLG 100
Query: 272 K 272
K
Sbjct: 101 K 101
>gi|15616400|ref|NP_244705.1| two-component response regulator [Bacillus halodurans C-125]
gi|21362443|sp|Q9RC52.1|CITT_BACHD RecName: Full=Transcriptional regulatory protein CitT
gi|5822801|dbj|BAA83947.1| CITT [Bacillus halodurans]
gi|10176463|dbj|BAB07557.1| two-component response regulator [Bacillus halodurans C-125]
Length = 230
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 69/122 (56%), Gaps = 6/122 (4%)
Query: 35 RVLVVDDDITCLRILEQML--RRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
+VL+++DD +I EQM+ + ++TC ALD L E+ D++L DV++PD+
Sbjct: 6 KVLIIEDDFRVAQIQEQMVNDHPYFHVISTCRTGGEALDYLSEKAAALDLILLDVYIPDV 65
Query: 93 DGFKLLEHIG---LEMDLPVITDGR-VSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 148
G +LL I ++D+ ++T + V V +R G DYL+KP+++E L V+
Sbjct: 66 KGLELLWAIREKFRDVDIMMVTAAKEVDTVQEALRGGIIDYLLKPVQKEVLHQRLDAYVQ 125
Query: 149 KR 150
KR
Sbjct: 126 KR 127
>gi|333893877|ref|YP_004467752.1| two-component system response regulator [Alteromonas sp. SN2]
gi|332993895|gb|AEF03950.1| two-component system response regulator [Alteromonas sp. SN2]
Length = 446
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+L+VDDD + LR+L L Y VT AL L+ FDVVLSD+ MP +DG
Sbjct: 11 LLLVDDDKSLLRLLTIRLEGEGYQVTAVEDGNAALRKLQ--NDAFDVVLSDLRMPGLDGL 68
Query: 96 KLLEHI-GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
L E I G+ D+PVI G +S + + G +L KP+ +EL+ + Q +
Sbjct: 69 SLFEEIMGIRKDIPVILMTAHGTISDAVAATQRGVFGFLPKPVDHDELRTLLQKAL 124
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.130 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,231,285,977
Number of Sequences: 23463169
Number of extensions: 434475546
Number of successful extensions: 1953776
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2980
Number of HSP's successfully gapped in prelim test: 70527
Number of HSP's that attempted gapping in prelim test: 1855671
Number of HSP's gapped (non-prelim): 98300
length of query: 665
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 516
effective length of database: 8,863,183,186
effective search space: 4573402523976
effective search space used: 4573402523976
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 80 (35.4 bits)