BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006006
(665 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 243/344 (70%), Gaps = 24/344 (6%)
Query: 7 IVQSSGGSGYGSSRAADVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQA 66
+V G G S AA + D FPA LRVLVVDDD TCL ILE+ML CLY VT C++A
Sbjct: 1 MVNPGHGRGPDSGTAAGGSNSDPFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRA 60
Query: 67 AVALDILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIR 123
AL +LR+ K FD+V+SDVHMPDMDGFKLLEH+GLEMDLPVI D S V++G+
Sbjct: 61 ESALSLLRKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVT 120
Query: 124 HGACDYLIKPIREEELKNIWQHVVRKRWNE-NKEHENSGSLEET-------DHHKRGSDE 175
HGA DYLIKP+R E LKNIWQHVVRK+ NE N + GS+E+T H+ +D
Sbjct: 121 HGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDAD- 179
Query: 176 IEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVN 235
+SSVNEG ++ RKR + +D G+ + +D S+ KKPRVVWSVELHQQFV+AVN
Sbjct: 180 -NNSSSVNEGNG---RSSRKRKEEEVDDQGD-DKEDSSSLKKPRVVWSVELHQQFVAAVN 234
Query: 236 QLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFC 294
QLG+DKAVPK+ILE+MNVPGLTRENVASH LQK+R+YL+RL GVSQ QG + +SF
Sbjct: 235 QLGVDKAVPKKILEMMNVPGLTRENVASH-----LQKYRIYLRRLGGVSQHQGNMNHSFM 289
Query: 295 APIETNV-KLGSLGRFDIQALAASGQIPPQTLAALHAELLGRPT 337
+ + L SL FD+Q+LA +GQ+PPQ+LA L A LGRPT
Sbjct: 290 TGQDQSFGPLSSLNGFDLQSLAVTGQLPPQSLAQLQAAGLGRPT 333
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/332 (58%), Positives = 238/332 (71%), Gaps = 26/332 (7%)
Query: 25 AVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVL 84
V + FP+GLRVLVVDDD TCL ILE+MLR CLY VT C++A +AL +LR+ K FD+V+
Sbjct: 28 TVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVI 87
Query: 85 SDVHMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKN 141
SDVHMPDMDGFKLLEH+GLEMDLPVI D S V++G+ HGA DYLIKP+R E LKN
Sbjct: 88 SDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKN 147
Query: 142 IWQHVVRKRWNENKEHENSGSLEETDHHKR--------------GSDEI-EYASSVNEGT 186
IWQHVVRKR +E E+SGS+EET ++ G D + + +SSVNEG
Sbjct: 148 IWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGN 207
Query: 187 EGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKR 246
+ RKR + E+ G+ + +D S KKPRVVWSVELHQQFV+AVNQLG++KAVPK+
Sbjct: 208 NWR-SSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKK 266
Query: 247 ILELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQ-QGGITNSFCAPIETNV-KLG 304
ILELMNVPGLTRENVASH LQK+R+YL+RL GVSQ QG + NSF + + L
Sbjct: 267 ILELMNVPGLTRENVASH-----LQKYRIYLRRLGGVSQHQGNLNNSFMTGQDASFGPLS 321
Query: 305 SLGRFDIQALAASGQIPPQTLAALHAELLGRP 336
+L FD+QALA +GQ+P Q+LA L A LGRP
Sbjct: 322 TLNGFDLQALAVTGQLPAQSLAQLQAAGLGRP 353
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 323 bits (828), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 185/324 (57%), Positives = 222/324 (68%), Gaps = 35/324 (10%)
Query: 26 VPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLS 85
+ DQFP+GLR+LVVDDD +CL ILE+ML R +Y VT CSQA VAL ILRERK FD+VLS
Sbjct: 3 INDQFPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLS 62
Query: 86 DVHMPDMDGFKLLEHIG-LEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKN 141
DVHMP M+G+ LL+ +G LEMDLPVI DGR + VM GI HGACDYLIKPIR EELKN
Sbjct: 63 DVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKN 122
Query: 142 IWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRI---- 197
IWQHVVR++ KE +S +LE D+ GS E SV+E +E + R +
Sbjct: 123 IWQHVVRRKCVMKKELRSSQALE--DNKNSGSLET-VVVSVSECSEESLMKCRNKKKKKK 179
Query: 198 -SAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGL 256
S +D+ + DP +KK RVVWS+ELHQQFV+AVN+LGIDKAVPKRILELMNVPGL
Sbjct: 180 RSVDRDDNEDDLLLDPGNSKKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPGL 239
Query: 257 TRENVASHLQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFD-IQALA 315
+RENVASH LQKFRLYLKRL+G + Q + S R++ IQAL
Sbjct: 240 SRENVASH-----LQKFRLYLKRLSGEASQSNDSE-------------STKRYENIQALV 281
Query: 316 ASGQIPPQTLAALHAELLGRPTGN 339
+SGQ+ PQTLAA L G+P N
Sbjct: 282 SSGQLHPQTLAA----LFGQPIDN 301
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 279 bits (713), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 150/265 (56%), Positives = 188/265 (70%), Gaps = 16/265 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
DQFP G+RVL VDDD TCL+ILE +LR C Y+VTT +QA AL++LRE K FD+V+SDV
Sbjct: 11 DQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDV 70
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
MPDMDGFKLLE +GLEMDLPVI VM+G+ HGACDYL+KP+R EELKNIWQ
Sbjct: 71 DMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQ 130
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HVVR R+++N+ N+G + GS +S +G K RK ++ED+
Sbjct: 131 HVVRSRFDKNRGSNNNGDKRD------GSGNEGVGNSDQNNGKGNRK--RKDQYNEDEDE 182
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
++DD KK RVVW+VELH++FV+AVNQLG +KA+PK+IL+LMNV LTRENVASH
Sbjct: 183 DRDDNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASH 242
Query: 265 LQEINLQKFRLYLKRLNGVSQQGGI 289
LQKFRLYLKR++GV+ Q I
Sbjct: 243 -----LQKFRLYLKRISGVANQQAI 262
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 269 bits (688), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 152/291 (52%), Positives = 197/291 (67%), Gaps = 25/291 (8%)
Query: 31 PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
P GLRVLVVDDD T L+ILE+ML++C Y VTTC A AL +LRERK +D+V+SDV+MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 91 DMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
DMDGFKLLEH+GLE+DLPVI DG S VM+G++HGACDYL+KPIR +ELK IWQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 148 RKRWNENKEHENSGSLEETDHHKRGSDEI---EYASSVNEGTEGTFKAQRKRISAKEEDD 204
RK+ E ++ E G ++ G+D I + A + G + +F +RK +++
Sbjct: 128 RKKLQEVRDIEGCG-------YEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLL 180
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGID-KAVPKRILELMNVPGLTRENVAS 263
+ S++KK RVVWS ELH +FV+AVNQ+G D KA PK+IL+LMNVP LTRENVAS
Sbjct: 181 QDESDPSSSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVAS 240
Query: 264 HLQEINLQKFRLYLKRLNGVSQ----QGGITNSFCAP--IETNVKLGSLGR 308
H LQK+RLYL RL + GG+ N+ +P +E N S GR
Sbjct: 241 H-----LQKYRLYLSRLEKGKELKCYSGGVKNADSSPKDVEVNSGYQSPGR 286
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 263 bits (671), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 142/264 (53%), Positives = 183/264 (69%), Gaps = 34/264 (12%)
Query: 23 DVAVPDQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDV 82
++ V DQFP G+RVL VDDD TCLRIL+ +L+RC Y+VTT +QA AL++LRE K FD+
Sbjct: 6 EIEVLDQFPVGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDL 65
Query: 83 VLSDVHMPDMDGFKLLEHIGLEMDLPVITDGRVS---AVMRGIRHGACDYLIKPIREEEL 139
V+SDV MPDMDGFKLLE +GLEMDLPVI S VM+G++HGACDYL+KP+R EEL
Sbjct: 66 VISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEEL 125
Query: 140 KNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISA 199
KNIWQHVVRK S + S+V+ G+ KA RKR
Sbjct: 126 KNIWQHVVRK-----------------------SKLKKNKSNVSNGSGNCDKANRKRKEQ 162
Query: 200 KEEDDGEL---ESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGL 256
EE++ E ++DDP+ KKPRV+W+ ELH +F++AV+ LG+++AVPK+IL+LMNV L
Sbjct: 163 YEEEEEEERGNDNDDPTAQKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKL 222
Query: 257 TRENVASHLQEINLQKFRLYLKRL 280
TRENVASH LQKFR+ LK++
Sbjct: 223 TRENVASH-----LQKFRVALKKV 241
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 236 bits (602), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 142/297 (47%), Positives = 187/297 (62%), Gaps = 20/297 (6%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
D+FP G+RVL VDD+ TCLR LE++L RC Y+VT ++ AL++LRE FD+V+SDV
Sbjct: 12 DKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDV 71
Query: 88 HMPDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQ 144
MPD DGFKLLE IGLEMDLPVI +VM+GI HGACDYL+KP+ +EL+NIW
Sbjct: 72 EMPDTDGFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWH 130
Query: 145 HVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDD 204
HVV+K K + E+D S + + VN+ + + + E D
Sbjct: 131 HVVKKNI---KSYAKLLPPSESDSVPSASRKRK--DKVNDSGDEDDSDREEDDGEGSEQD 185
Query: 205 GELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASH 264
G D T KKPRVVWS ELHQ+FVSAV QLG+DKAVPK+IL+LM++ GLTRENVASH
Sbjct: 186 G----DGSGTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASH 241
Query: 265 LQEINLQKFRLYLKRLNGVSQQGGITNSFCAPIETNVKLGSLGRFDIQALAASGQIP 321
LQK+RLYLK+++ QQ ++F + ++ L ++ A+ QIP
Sbjct: 242 -----LQKYRLYLKKIDEGQQQNMTPDAFGTRDSSYFQMAQLD--GLRDFTAARQIP 291
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 153/272 (56%), Gaps = 13/272 (4%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
+P GLRVLV+DDD + L ++E +L +C Y VTT A+ + + D+V+SD
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 90 PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
P DG +L+ + + +P + + G + VM+ + +GA D+L+KP+R EEL NIWQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 147 VRKRWNENKEHENSGSLEETDHHKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED- 203
RK+ ++K + G+LE+ H A++ + TE + + +
Sbjct: 127 FRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNY 186
Query: 204 DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 263
+GE+ D K R+ W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VAS
Sbjct: 187 NGEIT--DIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVAS 244
Query: 264 HLQEINLQKFRLYLKRLNGVSQQGGITNSFCA 295
H LQK+R+ LK+ + + G T S A
Sbjct: 245 H-----LQKYRMQLKKSIPTTSKHGATLSSTA 271
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 153/272 (56%), Gaps = 13/272 (4%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
+P GLRVLV+DDD + L ++E +L +C Y VTT A+ + + D+V+SD
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 90 PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
P DG +L+ + + +P + + G + VM+ + +GA D+L+KP+R EEL NIWQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 147 VRKRWNENKEHENSGSLEETDHHKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED- 203
RK+ ++K + G+LE+ H A++ + TE + + +
Sbjct: 127 FRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNY 186
Query: 204 DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 263
+GE+ D K R+ W+ +LH+QF++AVN LG DKAVPK+IL +M V LTRE VAS
Sbjct: 187 NGEIT--DIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVAS 244
Query: 264 HLQEINLQKFRLYLKRLNGVSQQGGITNSFCA 295
H LQK+R+ LK+ + + G T S A
Sbjct: 245 H-----LQKYRMQLKKSIPTTSKHGATLSSTA 271
>sp|Q9FJ16|APRR4_ARATH Putative two-component response regulator-like APRR4 OS=Arabidopsis
thaliana GN=APRR4 PE=3 SV=1
Length = 292
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 146/246 (59%), Gaps = 20/246 (8%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
FP GLRVLV D+D + L ILE+ L++ Y VT C++ A+ LR + FD+ + V+
Sbjct: 38 FPEGLRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNN 97
Query: 90 PDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
+ D F+ L IG EMDLP+I D V +V + + +GA DYLIKPIR E+L+ +++H+
Sbjct: 98 AEGDIFRFLSEIGSEMDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHL 157
Query: 147 VRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE 206
V+K + +G E+ K +SSV + T + KR S E + E
Sbjct: 158 VKKM--RERRSVVTGEAEKAAGEK--------SSSVGDSTIRN-PNKSKRSSCLEAEVNE 206
Query: 207 LESDD------PSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTREN 260
+ D S+ KK RVVW ELHQ F++AV+ LG+++AVPK+IL++M V ++REN
Sbjct: 207 EDRHDHNDRACASSAKKRRVVWDEELHQNFLNAVDFLGLERAVPKKILDVMKVDYISREN 266
Query: 261 VASHLQ 266
VASHLQ
Sbjct: 267 VASHLQ 272
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 145/268 (54%), Gaps = 44/268 (16%)
Query: 29 QFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVH 88
QFP VLVVD + T L ++Q++++ Y V+ + A AL L K ++V+ D H
Sbjct: 29 QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFH 88
Query: 89 MPDMDGFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
MP +DG + L+ I ++DLPV+ D + +VM+ +GACDY++KP++EE + NIWQH
Sbjct: 89 MPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQH 148
Query: 146 VVRKR---------------WNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTF 190
+VRKR W+E + S L TD G D + S G G
Sbjct: 149 IVRKRLIFKPDVAPPKPRMTWSEVFQPVQS-HLVPTD----GLDRDHFDSITINGGNGIQ 203
Query: 191 KAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILE 249
++K + P +KPR+ W+ ELHQ+F+ A+ + GI+KA PK ++E
Sbjct: 204 NMEKK------------QGKKP---RKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVE 248
Query: 250 L---MNVPGLTRENVASHLQE--INLQK 272
M + G+TR NVASHLQ+ INL++
Sbjct: 249 CLQEMRIEGITRSNVASHLQKHRINLEE 276
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 137/245 (55%), Gaps = 32/245 (13%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
RVL+V D L+ ++ + Y VT A+ L + K D+V+ D HMPD++G
Sbjct: 42 RVLLVGADSNS--SLKNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIWDFHMPDING 99
Query: 95 FKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRW 151
L IG +MDLPV+ + + VM I++GACD+L+KP+ +E + +W+HV RKR
Sbjct: 100 LDALNIIGKQMDLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVIAVLWRHVYRKRM 159
Query: 152 NE---NKEHENSGSLE-ETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGEL 207
++ +K E SG++E + D + D++E + EG+ + KEE
Sbjct: 160 SKSGLDKPGE-SGTVESDPDEY----DDLEQDNLYESNEEGS----KNTCDHKEEK---- 206
Query: 208 ESDDPSTTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELM----NVPGLTRENVA 262
S TKKPR+ W+ ELH +F AV ++G ++KA PK IL+ M NV GLTR NVA
Sbjct: 207 -----SPTKKPRMQWTPELHHKFEVAVEKMGSLEKAFPKTILKYMQEELNVQGLTRNNVA 261
Query: 263 SHLQE 267
SHLQ+
Sbjct: 262 SHLQK 266
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 143/280 (51%), Gaps = 37/280 (13%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ V+VVDDD L I+ +ML+ Y V AL L+ ++ D++++D +MP M+
Sbjct: 16 INVMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKALSTLKIQRDNIDLIITDYYMPGMN 75
Query: 94 GFKLLEHIGLEM-DLPV-ITDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRW 151
G +L + I E +LPV + + + GA ++ KPI +L I+Q + +
Sbjct: 76 GLQLKKQITQEFGNLPVLVMSSDTNKEEESLSCGAMGFIPKPIHPTDLTKIYQFALSNKR 135
Query: 152 N------ENKEHENSG---------SLEETDHHKRGSDEIEYAS---SVNE------GTE 187
N + H+++ E+ D K + S +VN T+
Sbjct: 136 NGKSTLSTEQNHKDADVSVPQQITLVPEQADVLKTKRKNCSFKSDSRTVNSTNGSCVSTD 195
Query: 188 GTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRI 247
G+ K ++++ + DDGE S KK ++ W+ LH F+ A+ +G+DKAVPK+I
Sbjct: 196 GSRKNRKRKPNGGPSDDGESMS---QPAKKKKIQWTDSLHDLFLQAIRHIGLDKAVPKKI 252
Query: 248 LELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQG 287
L M+VP LTRENVASH LQK+R++L+R V++QG
Sbjct: 253 LAFMSVPYLTRENVASH-----LQKYRIFLRR---VAEQG 284
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 132/276 (47%), Gaps = 37/276 (13%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLY---NVTTCSQAAVALDILRERKGCFDVVLSDVHMP 90
+ V+VVDD+ L I +ML + Y V AL L+ ++ D++++D +MP
Sbjct: 16 INVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRDNIDLIITDYYMP 75
Query: 91 DMDGFKLLEHIGLEM-DLPV-ITDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 148
M+G +L + I E +L V + + + GA ++ KPI +L I+Q +
Sbjct: 76 GMNGLQLKKQITQEFGNLSVLVMSSDPNKEEESLSCGAMGFIPKPIAPTDLPKIYQFALT 135
Query: 149 KRWN--------ENKEHENSGSLEET----------DHHKRGSDEIEYASSVNE------ 184
+ N +N++ N ++ K+ +VN
Sbjct: 136 YKRNGKSTLSTEQNQKDANVSVPQQIMLVPEQAYVLKTKKKNCSSKSDTRTVNSTNVSHV 195
Query: 185 GTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVP 244
T G+ K ++++ DDGE S P KK ++ W+ L F+ A+ +G DK VP
Sbjct: 196 STNGSRKNRKRKPKGGPSDDGESLSQPP---KKKKIWWTNPLQDLFLQAIQHIGYDKVVP 252
Query: 245 KRILELMNVPGLTRENVASHLQEINLQKFRLYLKRL 280
K+IL +MNVP LTRENVASH LQK+RL++KR+
Sbjct: 253 KKILAIMNVPYLTRENVASH-----LQKYRLFVKRV 283
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 88/149 (59%), Gaps = 8/149 (5%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V+ D + +I+ +LR+C Y V S A ++L+E+ D++L+++ +P +
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSIS 96
Query: 94 GFKLL----EHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
GF LL EH + ++PVI + + V++ + GA DYLIKP+R+ ELKN+WQHV
Sbjct: 97 GFALLALVMEHEACK-NIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHV 155
Query: 147 VRKRWNENKEHENSGSLEETDHHKRGSDE 175
R+ + ++ SL + H+ +DE
Sbjct: 156 WRRLTLRDDPTAHAQSLPASQHNLEDTDE 184
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 77/124 (62%), Gaps = 8/124 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+ + D + I+ +LR+C Y V S A DIL+E+ D+VL++V +P M
Sbjct: 43 VRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMS 102
Query: 94 GFKLLEHIGLEMD----LPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
GF LL I +E D +PVI ++ VS V + + GA D+L+KPIR+ EL+N+WQHV
Sbjct: 103 GFLLLSTI-MEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 161
Query: 147 VRKR 150
RK+
Sbjct: 162 WRKQ 165
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 79/138 (57%), Gaps = 17/138 (12%)
Query: 33 GLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
LRVL+V+ D + +I+ +LR+C Y V A ++L+ + D++L++V +P +
Sbjct: 49 ALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPSI 108
Query: 93 DGFKLLEHIGLEMDL----PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
G+ LL I +E D+ PVI T V+ V + + GA DYL+KP+R EL+N+WQH
Sbjct: 109 SGYALLTLI-MEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQH 167
Query: 146 VVRKR---------WNEN 154
V R++ WNE+
Sbjct: 168 VWRRQTSLAPDSFPWNES 185
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
L+VL+V++D + I+ +L+ C Y VT A IL + K C D+VL++V MP
Sbjct: 64 LKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS 123
Query: 94 GF----KLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G K++ H L+ ++PVI + + V + + +GA D+L+KPIR+ ELKN+WQHV
Sbjct: 124 GTGLLSKIMSHKTLK-NIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHV 182
Query: 147 VRK 149
R+
Sbjct: 183 WRR 185
>sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
japonica GN=PRR73 PE=2 SV=1
Length = 767
Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + D+PVI ++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 148 RK 149
R+
Sbjct: 201 RR 202
>sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
indica GN=PRR73 PE=2 SV=2
Length = 767
Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
LRVL+V++D + +++ +LR+C Y V A L + + D+VL++V MP +
Sbjct: 81 LRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLS 140
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + D+PVI ++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 141 GIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 200
Query: 148 RK 149
R+
Sbjct: 201 RR 202
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++VL+VD D + +++ +LR C+Y V A L + + D+VL++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + ++PVI ++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 148 RK 149
R+
Sbjct: 182 RR 183
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
++VL+VD D + +++ +LR C+Y V A L + + D+VL++V MP +
Sbjct: 62 IKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVS 121
Query: 94 GFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G LL I + ++PVI ++ + V + + GA D+L+KPIR+ ELKN+WQHV
Sbjct: 122 GISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 181
Query: 148 RK 149
R+
Sbjct: 182 RR 183
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=2
SV=1
Length = 386
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 52/72 (72%), Gaps = 5/72 (6%)
Query: 209 SDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEI 268
SD+ KKP+V W+ ELH++FV AV QLG+DKAVP RILE+MNV LTR NVASH
Sbjct: 139 SDENDIKKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASH---- 194
Query: 269 NLQKFRLYLKRL 280
LQK+R + K L
Sbjct: 195 -LQKYRSHRKHL 205
>sp|Q9C9F6|APRR6_ARATH Putative two-component response regulator-like APRR6 OS=Arabidopsis
thaliana GN=APRR6 PE=3 SV=2
Length = 755
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 28/265 (10%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+ +L++D D + L ML++ V + A+ AL ++ ++K ++++++ MP +D
Sbjct: 13 ISILLIDHDTASIASLTSMLQQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHID 72
Query: 94 GFKLLEHIGLEMDLPVIT---DGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKR 150
L + L+ D+P+I + + + AC L KPI +++KN+WQHV K+
Sbjct: 73 SHSFLNALLLK-DIPLILINPEIKTKEPSDLLTKRACFSLDKPISNDDIKNMWQHVFSKK 131
Query: 151 WNENKE---HENSGSLEETDHHKRGS-------DEIEYASSVNE----GTEGTFKAQRKR 196
E K+ E+ ++ + D ++ + I AS + T T++ +KR
Sbjct: 132 SQELKKINITEDQENVMDKDTYQIEAFRANLKRQRISQASLLGRRPFIDTFSTYETFQKR 191
Query: 197 -----ISAKEEDDGELESDDPSTTKKPRV-----VWSVELHQQFVSAVNQLGIDKAVPKR 246
+ K +E ++ K V +W+ E H +F++A++ LG + PK
Sbjct: 192 KSIANVEWKTTPSYAIEIENKRKEWKKSVGRRKSLWNSERHMKFIAAISILGEEDFRPKS 251
Query: 247 ILELMNVPGLTRENVASHLQEINLQ 271
ILE+MN P LT V SHLQ+ Q
Sbjct: 252 ILEIMNDPNLTHRQVGSHLQKYKAQ 276
>sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1 OS=Arabidopsis thaliana
GN=APRR1 PE=1 SV=1
Length = 618
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+R+L+ D+D T L + +L C Y VT A +D L D++L+++ +P
Sbjct: 19 VRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEIDLPMAK 78
Query: 94 GFKLLEHIGLEMDL---PVITDGR---VSAVMRGIRHGACDYLIKPIREEELKNIWQHVV 147
G K+L +I + DL PVI R V V++ ++ GA DYL+KP+R EL N+W H+
Sbjct: 79 GMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMW 138
Query: 148 RKR 150
R+R
Sbjct: 139 RRR 141
>sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp.
japonica GN=PRR1 PE=2 SV=2
Length = 518
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 6/125 (4%)
Query: 32 AGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPD 91
+ +R+L+ D D + R + ++L C Y VT +++L G D++L++V +P
Sbjct: 26 SKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPV 85
Query: 92 MDGFKLLEHIGLEMDL---PVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
FK+L++I +L P+I VS V++ +R GA +YL+KP+R EL N+W H
Sbjct: 86 SKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTH 145
Query: 146 VVRKR 150
V R+R
Sbjct: 146 VWRRR 150
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 68/123 (55%), Gaps = 8/123 (6%)
Query: 34 LRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMD 93
+RVL+V++D I+ +LR C Y V S A +L + D+VL++V MP +
Sbjct: 78 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 137
Query: 94 GF----KLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHV 146
G K+L H ++PVI + + V + + GA D+L+KPIR+ ELK +WQHV
Sbjct: 138 GIGLLCKILNHKS-RRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHV 196
Query: 147 VRK 149
R+
Sbjct: 197 WRR 199
>sp|Q23917|PDE2_DICDI 3',5'-cyclic-nucleotide phosphodiesterase regA OS=Dictyostelium
discoideum GN=regA PE=1 SV=1
Length = 793
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 17 GSSRAADVAVPDQF-PAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRE 75
S R +D + D++ P+ +R+LV DDD +IL +L++ YNVT +A + + +
Sbjct: 144 SSHRVSDFS--DEYSPSKVRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINK 201
Query: 76 RKGCFDVVLSDVHMPDMDGFKLLEHIG---LEMDLPVITDGRVSAVMR----GIRHGACD 128
+ +D+VL+DV MP + GF LL+ I + +PVI + + I+ G D
Sbjct: 202 GQQKYDLVLTDVMMPHITGFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKIGGQD 261
Query: 129 YLIKPIREEELKNIWQHVVRKRWNENKEHENSGSL 163
+L KPI +E LK V++ W KE E +L
Sbjct: 262 FLTKPIAKELLKKKIDTVLQSIWQRRKEEEYKATL 296
>sp|Q5NAN5|GLK2_ORYSJ Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica
GN=GLK2 PE=2 SV=1
Length = 539
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 72/135 (53%), Gaps = 18/135 (13%)
Query: 156 EHENSGSL-EETDHHKRGSDEIEYASSVNEGTEGTFKA---------QRKRISAKEEDDG 205
+ E S SL EE D G DE+ A + + + G K+ +RK S+
Sbjct: 147 DEERSSSLPEEKDAKNGGGDEVLSAVTTEDSSAGAAKSCSPSAEGHSKRKPSSSSSSAAA 206
Query: 206 ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHL 265
S +K +V W+ ELH++FV AV QLGIDKAVP RILELM + LTR N+ASH
Sbjct: 207 GKNS---HGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASH- 262
Query: 266 QEINLQKFRLYLKRL 280
LQK+R + K L
Sbjct: 263 ----LQKYRSHRKHL 273
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
Query: 216 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRL 275
+K +V W+ ELH++FV AV QLG+DKAVP RILELM V LTR NVASH LQK+R
Sbjct: 152 RKVKVDWTPELHRRFVEAVEQLGVDKAVPSRILELMGVHCLTRHNVASH-----LQKYRS 206
Query: 276 YLKRL 280
+ K L
Sbjct: 207 HRKHL 211
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 5/66 (7%)
Query: 215 TKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFR 274
T + +V W+ ELH++FV AV QLG+D+A+P RILELM V LTR NVASH LQKFR
Sbjct: 294 TSRKKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVASH-----LQKFR 348
Query: 275 LYLKRL 280
+ K +
Sbjct: 349 QHRKNI 354
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 12/143 (8%)
Query: 21 AADVAVPDQFPAGLRVLVV------DDDITCLRILEQMLRRCLYNVTTCSQAAVALDILR 74
A D++ + FP GL+VL++ D D + L Y VTT + AL +
Sbjct: 5 ANDLSKWENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVV 64
Query: 75 ERKGCFDVVLSDVHM-PDMDGFKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYL 130
+ F + + +V+M + + FK LE + LP I TD ++ M+ I GA ++L
Sbjct: 65 KNPESFHIAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCITTTMKCIALGAVEFL 122
Query: 131 IKPIREEELKNIWQHVVRKRWNE 153
KP+ E+LKNIWQHVV K +N+
Sbjct: 123 QKPLSPEKLKNIWQHVVHKAFND 145
>sp|Q5Z5I4|GLK1_ORYSJ Probable transcription factor GLK1 OS=Oryza sativa subsp. japonica
GN=GLK1 PE=2 SV=1
Length = 455
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 5/61 (8%)
Query: 220 VVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQEINLQKFRLYLKR 279
V W+ ELH++FV AV QLGIDKAVP RILE+M + LTR N+ASH LQK+R + K
Sbjct: 183 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASH-----LQKYRSHRKH 237
Query: 280 L 280
+
Sbjct: 238 M 238
>sp|Q8X613|ZRAR_ECO57 Transcriptional regulatory protein ZraR OS=Escherichia coli O157:H7
GN=zraR PE=3 SV=1
Length = 441
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RER FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRER--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPI 134
L+ I L +PV+ S+V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>sp|O23100|APRR8_ARATH Putative two-component response regulator-like APRR8 OS=Arabidopsis
thaliana GN=APRR8 PE=2 SV=2
Length = 367
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 37/233 (15%)
Query: 28 DQFPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDV 87
++F + VL++D D TCL L +M+R+C Y V ++A I+ + D+VL++
Sbjct: 8 ERFSNDICVLLLDSDATCLANLSEMIRKCGYKVVATTRADDLPLIINNKDKKIDLVLAEF 67
Query: 88 HMPDMDGFKLLEHIGLEMDLPVITDGR--VSAVMRGIRHGACDYLIKPIREEELKNIWQH 145
+ +M+ ++LLE I ++PV+ G A++ + GA L KP+ E + K +WQ
Sbjct: 68 RLIEMNKYELLEKIRSICEIPVVVSGAHVKDAIVECLCRGAKLCLEKPLMENDFKILWQF 127
Query: 146 VVRKRWN------------------------ENKEHENSGSLEETDHHKRGSDEIEYASS 181
V ++ N E K++ N+ +E D K Y
Sbjct: 128 TVSRQRNFRSQIDINPPEKNHSITHTQSLGAELKKNNNNSEVETEDLDK-------YKDE 180
Query: 182 VNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAV 234
+ +G + +A E+++G D KKP+++++ +L + + AV
Sbjct: 181 LGQGNKRKERADTDTGEHTEKNNG----SDLGDQKKPKLLFADDLQNETLEAV 229
>sp|Q9RC52|CITT_BACHD Transcriptional regulatory protein CitT OS=Bacillus halodurans
(strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153
/ C-125) GN=citT PE=3 SV=1
Length = 230
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 69/122 (56%), Gaps = 6/122 (4%)
Query: 35 RVLVVDDDITCLRILEQML--RRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
+VL+++DD +I EQM+ + ++TC ALD L E+ D++L DV++PD+
Sbjct: 6 KVLIIEDDFRVAQIQEQMVNDHPYFHVISTCRTGGEALDYLSEKAAALDLILLDVYIPDV 65
Query: 93 DGFKLLEHIG---LEMDLPVITDGR-VSAVMRGIRHGACDYLIKPIREEELKNIWQHVVR 148
G +LL I ++D+ ++T + V V +R G DYL+KP+++E L V+
Sbjct: 66 KGLELLWAIREKFRDVDIMMVTAAKEVDTVQEALRGGIIDYLLKPVQKEVLHQRLDAYVQ 125
Query: 149 KR 150
KR
Sbjct: 126 KR 127
>sp|P14375|ZRAR_ECOLI Transcriptional regulatory protein ZraR OS=Escherichia coli (strain
K12) GN=zraR PE=1 SV=2
Length = 441
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR YNV + AL+ +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQ--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPI 134
L+ I L +PV+ S+V + ++ GA DYLIKP+
Sbjct: 66 ATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPL 108
>sp|Q8GUN5|PHL1_ARATH Protein PHR1-LIKE 1 OS=Arabidopsis thaliana GN=PHL1 PE=1 SV=1
Length = 413
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 189 TFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRI 247
T Q++ +S++++ G S +T+K+ R+ W+ ELH+ FV AVNQLG ++A PK +
Sbjct: 204 TANQQQQMVSSEDQLSGRNSSSSVATSKQ-RMRWTPELHEAFVEAVNQLGGSERATPKAV 262
Query: 248 LELMNVPGLTRENVASHLQEINLQKFRLYLKRLNGVSQQGGITN 291
L+L+N PGLT +V SHLQ+ +++ + G Q+ +T+
Sbjct: 263 LKLLNNPGLTIYHVKSHLQKYRTARYKPETSEVTGEPQEKKMTS 306
>sp|Q9SAK5|APL_ARATH Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL
PE=2 SV=2
Length = 358
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
Query: 203 DDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENV 261
D G + + DP KPR+ W+VELH++FV AV QL G DKA PK I+ +M V GLT ++
Sbjct: 24 DSGLVLTTDP----KPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHL 79
Query: 262 ASHLQEINLQK 272
SHLQ+ L K
Sbjct: 80 KSHLQKFRLGK 90
>sp|Q9APD9|ZRAR_KLEOX Transcriptional regulatory protein ZraR OS=Klebsiella oxytoca
GN=zraR PE=3 SV=1
Length = 443
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 6/109 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDDI+ IL+ +LR Y V + AL+ +RE+ FD+VL D+ M +MDG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYRVALANNGLQALEKVREK--VFDLVLCDIRMAEMDGI 65
Query: 96 KLLEHIG-LEMDLPVITDGRVSAV---MRGIRHGACDYLIKPIREEELK 140
+ L+ I +PV+ S+V + ++ GA DYLIKP+ ++L+
Sbjct: 66 ETLKEIKTFNPSIPVLIMTAYSSVDTAVEALKSGALDYLIKPLDFDKLQ 114
>sp|Q8Z333|ZRAR_SALTI Transcriptional regulatory protein ZraR OS=Salmonella typhi GN=zraR
PE=3 SV=1
Length = 441
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDD++ IL+ +LR YNV AL +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDVSHCTILQALLRGWGYNVALAYSGHDALAQVREK--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPIREEELKN 141
L+ I L +P++ S+V + ++ GA DYLIKP+ + L+
Sbjct: 66 ATLKEIKALNPAIPILIMTAFSSVETAVEALKAGALDYLIKPLDFDRLQE 115
>sp|P25852|ZRAR_SALTY Transcriptional regulatory protein ZraR OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=zraR PE=1 SV=2
Length = 441
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 6/113 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LVVDDD++ IL+ +LR YNV AL +RE+ FD+VL DV M +MDG
Sbjct: 8 ILVVDDDVSHCTILQALLRGWGYNVALAYSGHDALAQVREK--VFDLVLCDVRMAEMDGI 65
Query: 96 KLLEHI-GLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPIREEELKNIWQ 144
L+ I L +P++ S+V + ++ GA DYLIKP+ + L+ +
Sbjct: 66 ATLKEIKALNPAIPILIMTAFSSVETAVEALKAGALDYLIKPLDFDRLQETLE 118
>sp|P48259|YCF27_CYAPA Probable transcriptional regulator ycf27 OS=Cyanophora paradoxa
GN=ycf27 PE=3 SV=1
Length = 239
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+I+ RILE L Y V T + AL I + ++V+ DV MP +DG
Sbjct: 7 KILVVDDEISIRRILETRLSMIGYEVVTAADGEEALTIFQLEHP--NLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRW 151
+ + + + E D+P+I G V+ + G+ GA DY++KP +EL+ + ++R+
Sbjct: 65 YGVCQELRKESDIPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRSLLRRTE 124
Query: 152 N 152
N
Sbjct: 125 N 125
>sp|P51358|YCF27_PORPU Probable transcriptional regulator ycf27 OS=Porphyra purpurea
GN=ycf27 PE=3 SV=1
Length = 243
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 5/118 (4%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y V T S AL I RK +V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLTIIGYEVITASNGEEALIIF--RKEYPSLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
+ + + + E D+P+I G V + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGEVCDRITGLEIGADDYVVKPFSPKELEARIRSVLRR 122
>sp|Q1XDC9|YCF27_PORYE Probable transcriptional regulator ycf27 OS=Porphyra yezoensis
GN=ycf27 PE=3 SV=2
Length = 243
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 5/118 (4%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LVVDD+ + RILE L Y V T S AL + RK +V+ DV MP +DG
Sbjct: 7 KILVVDDEASIRRILETRLTIIGYEVITASNGEEALLVF--RKEYPSLVVLDVMMPKLDG 64
Query: 95 FKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
+ + + + E D+P+I G V + G+ GA DY++KP +EL+ + V+R+
Sbjct: 65 YGVCQELRKESDVPIIMLTALGEVCDRITGLEIGADDYVVKPFSPKELEARIRSVLRR 122
>sp|O78428|YCF27_GUITH Probable transcriptional regulator ycf27 OS=Guillardia theta
GN=ycf27 PE=3 SV=1
Length = 254
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
+VL+VDD+ + +ILE L Y V T S AL++ + DVV+ D+ MP +DG
Sbjct: 16 KVLIVDDEASIRKILETRLSMIGYFVVTASDGEEALNLFHQEMP--DVVILDIMMPKLDG 73
Query: 95 FKLLEHIGLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK 149
+ + + I + D+P+I G V+ + G+ GA DY++KP +EL+ + V+R+
Sbjct: 74 YGVCQEIRKDSDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRAVLRR 131
>sp|Q04848|NTRC_AZOC5 Nitrogen assimilation regulatory protein NtrC OS=Azorhizobium
caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)
GN=ntrC PE=3 SV=2
Length = 480
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 36 VLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDGF 95
+LV DDD +L Q L R Y V +C AA + + G D+V++DV MPD + F
Sbjct: 6 ILVADDDAAIRTVLNQALSRAGYEVRSCGNAATLWRWVSQGDG--DLVITDVVMPDENAF 63
Query: 96 KLLEHI-GLEMDLPVITDGRVSAVMRGIR---HGACDYLIKPIREEELKNI 142
LL I DLPVI + M IR GA +YL KP +EL +I
Sbjct: 64 DLLPRIKKARPDLPVIVMSAQNTFMTAIRASERGAYEYLPKPFDLKELISI 114
>sp|P28835|YCF27_PORAE Probable transcriptional regulator ycf27 OS=Porphyridium aerugineum
GN=ycf27 PE=3 SV=1
Length = 240
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 7/132 (5%)
Query: 35 RVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDMDG 94
++LV+DD+ + RILE L Y+V + + AL I + ++V+ D+ MP +DG
Sbjct: 5 KILVIDDEASIRRILETRLSIIGYDVISAADGEEALSIFKREHP--NLVVLDLMMPKLDG 62
Query: 95 FKLLEHIGLEMDLPVITDGRVSAV---MRGIRHGACDYLIKPIREEELKNIWQHVVRK-- 149
+ + + + E D+P+I +S V + G+ GA DY++KP +EL+ + V+R+
Sbjct: 63 YGVCQELRKESDVPIIMLTALSDVSDRITGLELGADDYIVKPFSPKELEARIRSVLRRVD 122
Query: 150 RWNENKEHENSG 161
+ + N NSG
Sbjct: 123 KASSNNNLPNSG 134
>sp|Q8D0P1|CHEY_YERPE Chemotaxis protein CheY OS=Yersinia pestis GN=cheY PE=3 SV=3
Length = 129
Score = 60.5 bits (145), Expect = 5e-08, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 13/124 (10%)
Query: 34 LRVLVVDDDITCLRILEQMLRRC-LYNVTTCSQAAVALDILRERKGCFDVVLSDVHMPDM 92
LR LVVDD T RI+ +L+ +NV AL+ LR G FD V+SD +MP+M
Sbjct: 6 LRFLVVDDFSTMRRIVRNLLKELGFHNVEEAEDGVDALNKLR--AGGFDFVVSDWNMPNM 63
Query: 93 DGFKLLEHI---GLEMDLPVI---TDGRVSAVMRGIRHGACDYLIKPIR----EEELKNI 142
DG LL+ I G LPV+ + + ++ + GA Y++KP EE+L I
Sbjct: 64 DGLDLLKTIRTDGALATLPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKI 123
Query: 143 WQHV 146
++ +
Sbjct: 124 FEKL 127
>sp|Q54RP6|DHKL_DICDI Hybrid signal transduction histidine kinase L OS=Dictyostelium
discoideum GN=dhkL PE=3 SV=1
Length = 1709
Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 24/178 (13%)
Query: 3 ALQRIVQSSGGSGYG------SSRAADVAVPDQFPAGL--RVLVVDDDITCLRILEQMLR 54
LQ + + GG+G G R A +Q P+ L +VLVVDD+ ++IL +ML+
Sbjct: 1530 TLQVGMSNDGGNGCGVVSFWNKQRRASAEEQEQDPSKLLGKVLVVDDNHINIQILSKMLQ 1589
Query: 55 RCLYNVTTCSQAAVALDILRERKG-CFDVVLSDVHMPDMDGFKLLEHI---GLEMDLPVI 110
V + A AL + + G +D + D+ MPDMDGF++ I + LP +
Sbjct: 1590 TVGCEVDSVLSGADALAKINQSSGDSYDAIFLDIQMPDMDGFQVSRKIREREKKFSLPRV 1649
Query: 111 TDGRVSA------VMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGS 162
+A ++ G D++ KPI+ E+K I K++ +N H+ SGS
Sbjct: 1650 AIIATTANVFKEDQLKCFDAGMDDFISKPIKRAEIKEII-----KKYGKNGNHQ-SGS 1701
>sp|P10576|NTRC_BRASR Nitrogen assimilation regulatory protein OS=Bradyrhizobium sp.
(strain RP501 Parasponia) GN=ntrC PE=3 SV=1
Length = 480
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 30 FPAGLRVLVVDDDITCLRILEQMLRRCLYNVTTCSQAAVALDILRERKGCFDVVLSDVHM 89
PAG +LV DDD +L Q L R Y V AA + + +G D+V++DV M
Sbjct: 1 MPAG-SILVADDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVSQGEG--DLVITDVVM 57
Query: 90 PDMDGFKLLEHI-GLEMDLPVITDGRVSAVMRGIR---HGACDYLIKPIREEELKNI 142
PD + F LL I + +LPVI + M IR GA +YL KP +EL I
Sbjct: 58 PDENAFDLLPRIKKMRPNLPVIVMSAQNTFMTAIRPSERGAYEYLPKPFDLKELITI 114
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 243,487,429
Number of Sequences: 539616
Number of extensions: 10424816
Number of successful extensions: 52456
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 871
Number of HSP's that attempted gapping in prelim test: 44071
Number of HSP's gapped (non-prelim): 6545
length of query: 665
length of database: 191,569,459
effective HSP length: 124
effective length of query: 541
effective length of database: 124,657,075
effective search space: 67439477575
effective search space used: 67439477575
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)