Query         006009
Match_columns 665
No_of_seqs    406 out of 1695
Neff          5.6 
Searched_HMMs 29240
Date          Mon Mar 25 13:31:07 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006009.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006009hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3hna_A Histone-lysine N-methyl 100.0 5.6E-59 1.9E-63  486.4  19.8  243  396-665    27-280 (287)
  2 3q0b_X Histone-lysine N-methyl 100.0 7.8E-59 2.7E-63  448.2  15.8  160  219-381     1-166 (167)
  3 2pb7_A E3 ubiquitin-protein li 100.0 5.9E-57   2E-61  451.6  17.1  190  211-411     5-219 (239)
  4 3fde_A E3 ubiquitin-protein li 100.0 2.4E-57 8.3E-62  448.5  12.8  181  219-410     5-210 (212)
  5 1mvh_A Cryptic LOCI regulator  100.0 2.4E-55 8.1E-60  461.5  21.6  234  400-656    17-265 (299)
  6 3oln_A E3 ubiquitin-protein li 100.0 1.5E-55 5.2E-60  438.9  16.9  177  187-379     5-205 (231)
  7 1ml9_A Histone H3 methyltransf 100.0 4.6E-54 1.6E-58  452.4  16.2  246  406-665     5-293 (302)
  8 2r3a_A Histone-lysine N-methyl 100.0 7.2E-53 2.4E-57  442.8  19.8  232  407-665    38-291 (300)
  9 3bo5_A Histone-lysine N-methyl 100.0 1.2E-51   4E-56  431.8  22.4  236  401-665    14-277 (290)
 10 3h6l_A Histone-lysine N-methyl 100.0 9.4E-45 3.2E-49  377.4  12.2  205  411-665    23-248 (278)
 11 3ope_A Probable histone-lysine 100.0   4E-43 1.4E-47  354.2  16.9  188  427-665     2-205 (222)
 12 3ooi_A Histone-lysine N-methyl 100.0 4.9E-43 1.7E-47  355.9  14.5  192  423-665    15-223 (232)
 13 2w5y_A Histone-lysine N-methyl 100.0 3.1E-33 1.1E-37  276.4   9.1  141  493-665    36-183 (192)
 14 3f9x_A Histone-lysine N-methyl 100.0 2.3E-32 7.9E-37  262.6   8.7  137  498-663    19-164 (166)
 15 2f69_A Histone-lysine N-methyl  99.9   1E-27 3.5E-32  247.3  14.0  141  483-656    83-235 (261)
 16 1h3i_A Histone H3 lysine 4 spe  99.9 8.6E-26 2.9E-30  235.9  12.8  119  508-658   162-291 (293)
 17 2qpw_A PR domain zinc finger p  99.9 4.8E-26 1.6E-30  216.6   8.7  121  497-655    18-145 (149)
 18 1n3j_A A612L, histone H3 lysin  99.9 3.5E-26 1.2E-30  208.9   7.3  111  507-658     2-112 (119)
 19 3s8p_A Histone-lysine N-methyl  99.9 7.8E-24 2.7E-28  218.8   6.6  119  514-665   141-260 (273)
 20 3rq4_A Histone-lysine N-methyl  99.8 5.1E-22 1.7E-26  203.0   7.6  115  517-665   116-231 (247)
 21 3ep0_A PR domain zinc finger p  99.7 9.4E-18 3.2E-22  162.7  10.9  117  505-654    23-146 (170)
 22 3db5_A PR domain zinc finger p  99.7 9.4E-18 3.2E-22  159.8   8.7  118  506-655    20-143 (151)
 23 3dal_A PR domain zinc finger p  99.7 1.1E-16 3.6E-21  158.4   7.6  114  507-654    56-176 (196)
 24 3ray_A PR domain-containing pr  99.5 3.7E-14 1.3E-18  143.5   8.5  110  507-654    70-185 (237)
 25 3ihx_A PR domain zinc finger p  99.4 1.4E-13 4.8E-18  131.2   6.6  113  510-654    24-141 (152)
 26 3n71_A Histone lysine methyltr  98.4 9.1E-08 3.1E-12  106.6   4.9   50  605-654   201-255 (490)
 27 3qwp_A SET and MYND domain-con  98.4 1.4E-07 4.7E-12  103.3   6.0   43  604-654   201-243 (429)
 28 3qww_A SET and MYND domain-con  98.3 3.4E-07 1.2E-11  100.5   5.4   42  605-654   202-243 (433)
 29 3qxy_A N-lysine methyltransfer  96.3  0.0028 9.7E-08   69.7   5.1   43  604-654   222-264 (449)
 30 2h21_A Ribulose-1,5 bisphospha  94.9   0.011 3.7E-07   64.6   2.9   51  604-654   189-242 (440)
 31 3smt_A Histone-lysine N-methyl  94.7   0.018 6.1E-07   64.2   4.2   41  607-654   275-315 (497)
 32 3qww_A SET and MYND domain-con  56.3     6.6 0.00023   42.6   3.6   30  509-538     7-36  (433)
 33 3qwp_A SET and MYND domain-con  52.0     9.2 0.00032   41.3   3.8   32  508-539     4-35  (429)
 34 3n71_A Histone lysine methyltr  49.2      10 0.00034   41.9   3.6   34  508-541     6-39  (490)
 35 1rju_V Metallothionein; Cu(I)-  29.7      24 0.00082   24.5   1.6   15  448-462    18-34  (36)
 36 3smt_A Histone-lysine N-methyl  29.3      28 0.00097   38.5   3.2   32  510-541    94-125 (497)
 37 1wvo_A Sialic acid synthase; a  22.7      25 0.00086   29.2   0.9   17  634-650     8-24  (79)
 38 3qxy_A N-lysine methyltransfer  22.5      48  0.0016   36.0   3.4   33  510-542    39-72  (449)
 39 1aqs_A Cu-MT, Cu-metallothione  22.4      45  0.0015   24.9   2.1   20  447-466    21-42  (53)

No 1  
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=100.00  E-value=5.6e-59  Score=486.44  Aligned_cols=243  Identities=31%  Similarity=0.585  Sum_probs=212.3

Q ss_pred             CCCceeeeccccccccceeeeeCCCCCCCCCCcEEcccccCCCccccC--CCCCCCCCCCCCCCC-CCccccccCCCcee
Q 006009          396 PKGYLSLDISGKKENVPVLLFNDIDGDYEPLYYEYLVRTVFPPFVFTQ--GSNGAGCDCVSGCTD-RCFCAVKNGGEFAY  472 (665)
Q Consensus       396 ~~g~i~~DiS~G~E~~PV~vvN~vD~e~~P~~F~YI~~~~~~~~~~~~--~~~~~gC~C~~~C~~-~C~C~~~ngg~~~Y  472 (665)
                      +.++|+.|||+|+|++||+++|+||++.+|..|+||+++++..++...  ..+..||+|.++|.+ +|.|.+++ +.++|
T Consensus        27 ~~~~~~~Dis~G~E~~pi~~~N~vD~~~~p~~f~Y~~~~~~~~~~~~~~~~~~~~gC~C~~~C~~~~C~C~~~~-~~~~y  105 (287)
T 3hna_A           27 VERIVSRDIARGYERIPIPCVNAVDSEPCPSNYKYVSQNCVTSPMNIDRNITHLQYCVCIDDCSSSNCMCGQLS-MRCWY  105 (287)
T ss_dssp             CCEEEESCTTTTCSSSCCCEEESSSSCCCCCSSEECSSCEESSCCCCCCBGGGCCCCCCSSSSCSTTCHHHHHT-SSCCB
T ss_pred             cCCEEhHhhCCCCCCCCEEEEeCCCCCCCCCCcEEccccccCCCccccccCCCCCCCcCcCCCCCCCCcCcccC-ccccc
Confidence            357999999999999999999999999889999999998877665322  235689999999986 79999887 46899


Q ss_pred             cCCCceec-----CCCeEeecCCCCCCCCCCcCcccccCCcccEEEEEcCCCCccceecccccCCceEEEeeceeecHHH
Q 006009          473 DHNGYLLR-----GKPVIFECGAFCQCPPTCRNRVSQRGLRNRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQ  547 (665)
Q Consensus       473 ~~~G~L~~-----~~~~i~EC~~~C~C~~~C~NRv~Q~G~k~~LeVfrT~~kGwGVrA~e~I~kGtFIcEY~GEVit~~e  547 (665)
                      +++|+|+.     ..+++|||++.|+|+.+|.||++|+|++.+|+||+|+.+||||||+++|++|+||+||+|||++.+|
T Consensus       106 ~~~g~l~~~~~~~~~~~i~EC~~~C~C~~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~eY~Gevi~~~e  185 (287)
T 3hna_A          106 DKDGRLLPEFNMAEPPLIFECNHACSCWRNCRNRVVQNGLRARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELISDSE  185 (287)
T ss_dssp             CTTSCBCTTCCSSSCCCEECCCTTSSSCTTCSSCSGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEEECEEEEEHHH
T ss_pred             CCCCcccccccccCCceEEecCCCCCCCCCCCCcccCcCCcccEEEEEcCCCceEEEeCcccCCCCEEEEeeeEEccHHH
Confidence            99999975     4578999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCCeecccCccccccCcCCCCccccccCCCCCCCCCCCCceEEeccccCCccccccCCCCCCeeEEEEEEcCCC
Q 006009          548 AQIFSMNGDSLIYPNRFSARWGEWGDLSQVFSDYMRPSHPSIPPLDFAMDVSRMRNVACYISHSPTPNVMVQFVLYDHNN  627 (665)
Q Consensus       548 a~~r~~~~d~ylf~~~~~~~~~~~~dl~~~~~~~~~~~~~~~~~~~~~IDA~~~GNvARFINHSC~PN~~~q~V~~d~~d  627 (665)
                      ++.+.  .+.|+|..+..                        ....++|||+.+||+||||||||+||+.++.|+..+.+
T Consensus       186 ~~~r~--~~~Y~f~l~~~------------------------~~~~~~IDa~~~GN~aRFiNHSC~PN~~~~~v~~~~~d  239 (287)
T 3hna_A          186 ADVRE--EDSYLFDLDNK------------------------DGEVYCIDARFYGNVSRFINHHCEPNLVPVRVFMAHQD  239 (287)
T ss_dssp             HHTCS--CCTTEEESCCS------------------------SSSCEEEEEEEEECGGGGCEECSSCSEEEEEEESSCCC
T ss_pred             Hhhhc--ccceEEEeccC------------------------CCceEEEeccccCCchheeeecCCCCceeEEEEEecCC
Confidence            88653  34666633210                        01358999999999999999999999999999999988


Q ss_pred             CcccEEEEEEccCCCCCCeEEEecCCCc---cCCCccccCC
Q 006009          628 LMFPHLMLFALENIPPLRELSIDYGVAD---EWSGKLAICN  665 (665)
Q Consensus       628 ~~~prI~fFA~rdI~pGEELT~DYG~~~---~~~~k~C~CG  665 (665)
                      ...++|+|||+|||++||||||||+...   ......|+||
T Consensus       240 ~~~~~i~~~A~RdI~~GEELT~dYg~~~~~~~~~~~~C~CG  280 (287)
T 3hna_A          240 LRFPRIAFFSTRLIEAGEQLGFDYGERFWDIKGKLFSCRCG  280 (287)
T ss_dssp             TTCCEEEEEESSCBCTTCBCEECCCHHHHHHHTTTCCCCCC
T ss_pred             CCceeEEEEEcceeCCCCeEEEeCCCcccccCCCcCEeeCC
Confidence            8999999999999999999999999762   2356799998


No 2  
>3q0b_X Histone-lysine N-methyltransferase, H3 lysine-9 S SUVH5; SRA, fully methylated CG, SUVH5, 5MC binding protein, fully methylated CG duplex DNA; HET: DNA 5CM; 2.20A {Arabidopsis thaliana} PDB: 3q0c_X* 3q0d_X* 3q0f_X*
Probab=100.00  E-value=7.8e-59  Score=448.17  Aligned_cols=160  Identities=49%  Similarity=0.816  Sum_probs=141.9

Q ss_pred             CeeccCCCcccCceechHhhhhhhccCcCCCCCccccCCCCCCCCCCcEEEEEEcCCcCCCCCCCCeEEEEecCCCCC--
Q 006009          219 RIVGSIPGVQIGDVFFFRMELLVVGLHGHSQAGIDYLPGSQSANGEPIATSIIVSGGYEDDEDAGDVLIYTGHGGQDK--  296 (665)
Q Consensus       219 ~i~G~vpGv~vGd~f~~R~el~~~GlH~~~~~GI~~~~~~~~~~g~~~A~SIV~SggY~dd~D~gd~liYtG~GG~~~--  296 (665)
                      ++||+||||+|||||++|+||+++|+|+++|+|||+++.   ..++++|+|||+||||+||+|+||+|+|||+||++.  
T Consensus         1 ~~~G~vpGv~vGd~f~~R~el~~~G~H~~~~aGI~~~~~---~~~~~gA~SIV~SggY~Dd~D~gd~l~YTG~GG~~~~~   77 (167)
T 3q0b_X            1 QIIGTVPGVEVGDEFQYRMELNLLGIHRPSQSGIDYMKD---DGGELVATSIVSSGGYNDVLDNSDVLIYTGQGGNVGKK   77 (167)
T ss_dssp             CCCSCCTTCCTTCEESCHHHHHHTTSCCCSSCSEEEEEC---SSSCEEEEEEEESSSTTCEECSSSEEEEECSCTTCC--
T ss_pred             CcccCCCCCcCccEecchHHHhHhCcCCCccCCeecccc---cCCCcceEEEEeCCCcccccCCCCEEEEECCCCCcccc
Confidence            468999999999999999999999999999999999863   237789999999999999999999999999999986  


Q ss_pred             -CCccccCcccchhhHHHHHhhhcCceeEEEecccc---CCCCcceeeEecCeEEEEEeEeecCCCcceEEEEEEEeecC
Q 006009          297 -LSRQCEHQKLEGGNLAMERSMHYGIEVRVIRGFRY---QGSVSSKVYVYDGLYKIHDCWFDVGKSGFGVYKYKLLRIEG  372 (665)
Q Consensus       297 -~~~~~~dQ~l~~gNlAL~~S~~~~~pVRViRg~k~---~~~~~~~~yrYDGLY~V~~~w~e~g~~G~~v~kf~L~R~~g  372 (665)
                       .++|..||+|++||+||++|+++++|||||||++.   ...+|.++|||||||+|++||.++|++||.||||+|+|+||
T Consensus        78 ~~~~q~~DQ~l~~gN~AL~~S~~~~~pVRViRg~k~~~~~~~~p~~gyrYDGLY~V~~~w~e~g~~G~~v~kf~L~R~~g  157 (167)
T 3q0b_X           78 KNNEPPKDQQLVTGNLALKNSINKKNPVRVIRGIKNTTLQSSVVAKNYVYDGLYLVEEYWEETGSHGKLVFKFKLRRIPG  157 (167)
T ss_dssp             ---CCCCCCCSSHHHHHHHHHHHHCCCEEEEEECC----------CCEEEEEEEEEEEEEEEECTTSCEEEEEEEEECTT
T ss_pred             ccccccccCccchhHHHHHHHHHcCCcEEEEEeecccccCCCCCCccEEECeEEEEeeeEEeeCCCCcEEEEEEEEEcCC
Confidence             37899999999999999999999999999999998   34569999999999999999999999999999999999999


Q ss_pred             CCCCcchhe
Q 006009          373 QPEMGSAIL  381 (665)
Q Consensus       373 Q~~l~s~~~  381 (665)
                      ||+|+++.|
T Consensus       158 Qp~l~~~~~  166 (167)
T 3q0b_X          158 QPELPWKEV  166 (167)
T ss_dssp             SCCCCC---
T ss_pred             CCCCChhhc
Confidence            999987654


No 3  
>2pb7_A E3 ubiquitin-protein ligase UHRF1; beta barrel, NEW fold; 1.90A {Homo sapiens} SCOP: b.122.1.12
Probab=100.00  E-value=5.9e-57  Score=451.64  Aligned_cols=190  Identities=33%  Similarity=0.523  Sum_probs=155.4

Q ss_pred             cccccCCCCeeccCCCcccCceechHhhhhhhccCcCCCCCccccCCCCCCCCCCcEEEEEEcCCcCCCCCCCCeEEEEe
Q 006009          211 QLWLNRDKRIVGSIPGVQIGDVFFFRMELLVVGLHGHSQAGIDYLPGSQSANGEPIATSIIVSGGYEDDEDAGDVLIYTG  290 (665)
Q Consensus       211 ~~~~~~~~~i~G~vpGv~vGd~f~~R~el~~~GlH~~~~~GI~~~~~~~~~~g~~~A~SIV~SggY~dd~D~gd~liYtG  290 (665)
                      ...++..++ |||||||+|||||+||+||+++|||+++|+|||++       ...+|+|||+||||+||+|+||+|+|||
T Consensus         5 ~~~~~~~~~-~G~iPGV~VGd~f~~R~el~~~GlH~~~~aGI~g~-------~~~GA~SIVlSGgYeDD~D~GD~liYTG   76 (239)
T 2pb7_A            5 ECTIVPSNH-YGPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGR-------SNDGAYSLVLAGGYEDDVDHGNFFTYTG   76 (239)
T ss_dssp             CCCSSCTTC-CSCCTTCCTTCEESSHHHHHHHTSSCCSSCSEEEE-------TTTEEEEEEESSCSTTCCBCSSEEEEEC
T ss_pred             EEEecCCCc-ccCCCCCcCCCEECCHHHHHHhCCccccccCcccC-------CCCCEEEEEECCCccccccCCcEEEEEc
Confidence            455677676 69999999999999999999999999999999964       3457999999999999999999999999


Q ss_pred             cCCCCCC-----CccccCcccchhhHHHHHh---------------hhcCceeEEEeccccC--CC-CcceeeEecCeEE
Q 006009          291 HGGQDKL-----SRQCEHQKLEGGNLAMERS---------------MHYGIEVRVIRGFRYQ--GS-VSSKVYVYDGLYK  347 (665)
Q Consensus       291 ~GG~~~~-----~~~~~dQ~l~~gNlAL~~S---------------~~~~~pVRViRg~k~~--~~-~~~~~yrYDGLY~  347 (665)
                      +||++..     +.|..||+|++||+||++|               |++++|||||||++..  +. .|.++|||||||+
T Consensus        77 sGG~d~~gnkr~~~q~~DQ~L~~gNlAL~~sc~~~~~~k~~~~~~s~~~g~PVRVIRg~k~~k~s~yaP~~GyrYDGLY~  156 (239)
T 2pb7_A           77 SGGRDLSGNKRTAEQSCDQKLTNTNRALALNCFAPINDQEGAEAKDWRSGKPVRVVRNVKGGKNSKYAPAEGNRYDGIYK  156 (239)
T ss_dssp             CCC----------CCCSCCCSCHHHHHHHHTSSSCCCTTTCEECTTGGGSCCEEEEEEGGGGGTCTTSCSSSEEEEEEEE
T ss_pred             cCCccCcccccccccccccccccccHHHHhhhhcccccccchhhhhhccCCceEEEcccccCcCCcccCCceEEeCCeEE
Confidence            9999864     4589999999999999987               4689999999999973  33 4899999999999


Q ss_pred             EEEeEeecCCCcceEEEEEEEeecCCCCCcchh--eeecccccCCCCccCCCCceeeecccccccc
Q 006009          348 IHDCWFDVGKSGFGVYKYKLLRIEGQPEMGSAI--LRFADSLRTKPLSVRPKGYLSLDISGKKENV  411 (665)
Q Consensus       348 V~~~w~e~g~~G~~v~kf~L~R~~gQ~~l~s~~--~k~~~~l~~~~~~~~~~g~i~~DiS~G~E~~  411 (665)
                      |++||.++|++||.||||+|+|++|||+++++.  ++. +.+  ...+++|.||+..||++++|.-
T Consensus       157 V~~~w~e~gk~G~~V~kf~L~R~~gQP~~w~~~~~~r~-~~l--~~~~~~p~~~~~~~~~~~~~~~  219 (239)
T 2pb7_A          157 VVKYWPEKGKSGFLVWRYLLRRDDDEPGPWTKEGKDRI-KKL--GLTMQYPEGYLEALANREREKE  219 (239)
T ss_dssp             EEEEEEEECTTSSEEEEEEEEECCSSCCTTSHHHHHHH-HHT--TCCCBCCTTTTTCC--------
T ss_pred             EEEEEEeecCCCcEEEEEEEEECCCCCCCccccccccc-ccc--CcceecCcccchhhhhhhhhhc
Confidence            999999999999999999999999999876532  222 333  3356789999999999998853


No 4  
>3fde_A E3 ubiquitin-protein ligase UHRF1; SRA domain, base flipping, DNA CPG methylation, cell cycle, developmental protein, DNA damage; HET: 5CM; 1.41A {Mus musculus} SCOP: b.122.1.12 PDB: 2zo0_B* 2zo2_B* 3f8i_A* 2zo1_B* 3f8j_B* 2zkd_A* 2zke_A* 2zkf_A* 2zkg_A 3dwh_A 3bi7_A 3clz_A*
Probab=100.00  E-value=2.4e-57  Score=448.50  Aligned_cols=181  Identities=35%  Similarity=0.567  Sum_probs=158.3

Q ss_pred             CeeccCCCcccCceechHhhhhhhccCcCCCCCccccCCCCCCCCCCcEEEEEEcCCcCCCCCCCCeEEEEecCCCCCC-
Q 006009          219 RIVGSIPGVQIGDVFFFRMELLVVGLHGHSQAGIDYLPGSQSANGEPIATSIIVSGGYEDDEDAGDVLIYTGHGGQDKL-  297 (665)
Q Consensus       219 ~i~G~vpGv~vGd~f~~R~el~~~GlH~~~~~GI~~~~~~~~~~g~~~A~SIV~SggY~dd~D~gd~liYtG~GG~~~~-  297 (665)
                      .+||+||||+|||||++|+||+++|+|+++|+||+++.       ..+|+|||+||||+||+|+||+|+|||+||++.. 
T Consensus         5 ~~~G~iPGv~VGd~f~~R~el~~~G~H~~~qaGI~g~~-------~~GA~SIVlSGGY~DD~D~Gd~l~YTGsGG~d~~g   77 (212)
T 3fde_A            5 NHFGPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRS-------NDGAYSLVLAGGYEDDVDNGNYFTYTGSGGRDLSG   77 (212)
T ss_dssp             TCCSCCTTCCTTCEESSHHHHHHHTSSCCSSCSEEEET-------TTEEEEEEECSCSTTCEECSSEEEEECSCCBCCTT
T ss_pred             ccccCCCCCcCccEecCHHHHhHhccCCCCcCCcccCC-------CcceEEEEeCCCcccCCCCCCEEEEeccCCccCcC
Confidence            34799999999999999999999999999999999642       3469999999999999999999999999999863 


Q ss_pred             ----CccccCcccchhhHHHHHhh--------------hcCceeEEEeccccC--CC-CcceeeEecCeEEEEEeEeecC
Q 006009          298 ----SRQCEHQKLEGGNLAMERSM--------------HYGIEVRVIRGFRYQ--GS-VSSKVYVYDGLYKIHDCWFDVG  356 (665)
Q Consensus       298 ----~~~~~dQ~l~~gNlAL~~S~--------------~~~~pVRViRg~k~~--~~-~~~~~yrYDGLY~V~~~w~e~g  356 (665)
                          ++|..||+|++||+||++||              ++++|||||||++..  +. .|.++|||||||+|++||.++|
T Consensus        78 nkr~~~q~~DQ~l~~gNlAL~~s~~~~~~~~~~~~~s~~~g~PVRVIRg~k~~k~s~yaP~~gyrYDGLY~V~~~W~e~g  157 (212)
T 3fde_A           78 NKRTAGQSSDQKLTNNNRALALNCHSPINEKGAEAEDWRQGKPVRVVRNMKGGKHSKYAPAEGNRYDGIYKVVKYWPERG  157 (212)
T ss_dssp             TCSCCCBCSCCCSCHHHHHHHHTSSSCCCTTCEECSSGGGSCCEEEEEESCSSTTCSSSCSSSEEEEEEEEEEEEEEEEC
T ss_pred             ccccCcccccccccccchHHHhhccccccccchhhhhhhcCCcEEEEcccCcCCCCccCCCCCeEeCeEEEEEEEEEccC
Confidence                45999999999999999986              579999999999974  23 3889999999999999999999


Q ss_pred             CCcceEEEEEEEeecCCCCCcchheeecccccCCC---CccCCCCceeeeccccccc
Q 006009          357 KSGFGVYKYKLLRIEGQPEMGSAILRFADSLRTKP---LSVRPKGYLSLDISGKKEN  410 (665)
Q Consensus       357 ~~G~~v~kf~L~R~~gQ~~l~s~~~k~~~~l~~~~---~~~~~~g~i~~DiS~G~E~  410 (665)
                      ++||.||||+|+|++|||+.+.    ...+++.+.   .++.|.||+..|+++++|+
T Consensus       158 ~~G~~V~kf~L~R~~gqp~~w~----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  210 (212)
T 3fde_A          158 KSGFLVWRYLLRRDDTEPEPWT----REGKDRTRQLGLTMQYPEGYLEALANKEKSR  210 (212)
T ss_dssp             TTSSEEEEEEEEECCSSCCTTS----HHHHHHHHHHTCCCBCCTTHHHHHHHHTSCC
T ss_pred             CCCcEEEEEEEEECCCCCCCcc----hhhHhhhhccccceeCCcchhhHhhhcchhc
Confidence            9999999999999999998643    333333222   2457889999999999985


No 5  
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=100.00  E-value=2.4e-55  Score=461.55  Aligned_cols=234  Identities=32%  Similarity=0.584  Sum_probs=202.7

Q ss_pred             eeeeccccccccceeeeeCCCCCCCCC-CcEEcccccCCCccccC-CCCCCCCCCCC--CCCC----CCcccccc--CCC
Q 006009          400 LSLDISGKKENVPVLLFNDIDGDYEPL-YYEYLVRTVFPPFVFTQ-GSNGAGCDCVS--GCTD----RCFCAVKN--GGE  469 (665)
Q Consensus       400 i~~DiS~G~E~~PV~vvN~vD~e~~P~-~F~YI~~~~~~~~~~~~-~~~~~gC~C~~--~C~~----~C~C~~~n--gg~  469 (665)
                      +..|+++|.|++||+++|+||++.+|. .|+||+++++..++... ..+..||+|.+  +|.+    +|.|..++  ++.
T Consensus        17 ~~~~~~~g~e~~pi~~~N~vd~~~~p~~~F~Yi~~~~~~~~~~~~~~~~~~gC~C~~~~~C~~~~~~~C~C~~~~~~~~~   96 (299)
T 1mvh_A           17 LFRKKLREIEGPEVTLVNEVDDEPCPSLDFQFISQYRLTQGVIPPDPNFQSGCNCSSLGGCDLNNPSRCECLDDLDEPTH   96 (299)
T ss_dssp             HHHHHHHTSSSSCEEEECSSCCCCCSCCCSEECSSCEECTTCCCCCGGGCCCCCCCCSSSSCTTCTTTCSSSTTCCSSCC
T ss_pred             HHHHHHcCcCCCCEEEEeCCCCCCCCCCCcEEccceecCCCcCcCCCcCCCCCcCcCCCCcCCCCCCCCccccccccccc
Confidence            457899999999999999999998777 89999999988776522 23458999996  8986    69998774  688


Q ss_pred             ceecCCCcee-cCCCeEeecCCCCCCCCCCcCcccccCCcccEEEEEcCCCCccceecccccCCceEEEeeceeecHHHH
Q 006009          470 FAYDHNGYLL-RGKPVIFECGAFCQCPPTCRNRVSQRGLRNRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQA  548 (665)
Q Consensus       470 ~~Y~~~G~L~-~~~~~i~EC~~~C~C~~~C~NRv~Q~G~k~~LeVfrT~~kGwGVrA~e~I~kGtFIcEY~GEVit~~ea  548 (665)
                      ++|+.+|+|. ....++|||++.|+|++.|.||++|+|.+.+|+||+|..+||||||+++|++|+||+||+||||+.+|+
T Consensus        97 ~~y~~~g~l~~~~~~~i~EC~~~C~C~~~C~Nr~~q~g~~~~l~v~~t~~~G~Gv~A~~~I~kG~~I~EY~Gevi~~~ea  176 (299)
T 1mvh_A           97 FAYDAQGRVRADTGAVIYECNSFCSCSMECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEA  176 (299)
T ss_dssp             CSBCTTSSBCTTCCSEEECCCTTSCSCTTCTTCTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEEEEHHHH
T ss_pred             cccCCCCceeecCCCCeEeCCCCCCCCCCcCCccccccccccEEEEEcCCCcceEeeCceeCCCCEEEEeeeEECcHHHH
Confidence            9999999984 556789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhc----CCCeecccCccccccCcCCCCccccccCCCCCCCCCCCCceEEeccccCCccccccCCCCCCeeEEEEEEc
Q 006009          549 QIFSM----NGDSLIYPNRFSARWGEWGDLSQVFSDYMRPSHPSIPPLDFAMDVSRMRNVACYISHSPTPNVMVQFVLYD  624 (665)
Q Consensus       549 ~~r~~----~~d~ylf~~~~~~~~~~~~dl~~~~~~~~~~~~~~~~~~~~~IDA~~~GNvARFINHSC~PN~~~q~V~~d  624 (665)
                      +.|..    .+..|+|..+..                       .....++|||+.+||+||||||||+||+.++.|+.+
T Consensus       177 ~~R~~~y~~~~~~Y~f~l~~~-----------------------~~~~~~~IDa~~~GN~aRfiNHSC~PN~~~~~v~~~  233 (299)
T 1mvh_A          177 AKRDKNYDDDGITYLFDLDMF-----------------------DDASEYTVDAQNYGDVSRFFNHSCSPNIAIYSAVRN  233 (299)
T ss_dssp             HHHHTTCCSCSCCCEEEECSS-----------------------CSSSCEEEECSSEECGGGGCEECSSCSEEEEEEESC
T ss_pred             HHHHHhhhccCceEEEEecCC-----------------------CCCccEEEeCcccCChhheEeecCCCCeEEEEEEee
Confidence            87753    234565532210                       012368999999999999999999999999999998


Q ss_pred             CCCCcccEEEEEEccCCCCCCeEEEecCCCcc
Q 006009          625 HNNLMFPHLMLFALENIPPLRELSIDYGVADE  656 (665)
Q Consensus       625 ~~d~~~prI~fFA~rdI~pGEELT~DYG~~~~  656 (665)
                      +.+...++|+|||+|||++||||||||+...+
T Consensus       234 ~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~  265 (299)
T 1mvh_A          234 HGFRTIYDLAFFAIKDIQPLEELTFDYAGAKD  265 (299)
T ss_dssp             TTCTTSCEEEEEESSCBCTTCBCEECCCTTSS
T ss_pred             cCCCCceEEEEEEccCcCCCCEEEEEcCCccc
Confidence            88888899999999999999999999998744


No 6  
>3oln_A E3 ubiquitin-protein ligase UHRF2; DNA-binding, metal-binding, nucleus, phosphorylation transcription, transcription regulation; 2.30A {Homo sapiens} SCOP: b.122.1.12
Probab=100.00  E-value=1.5e-55  Score=438.94  Aligned_cols=177  Identities=30%  Similarity=0.531  Sum_probs=139.1

Q ss_pred             HhccCCCCccccchhHhHHHHHhccccccCCCCeeccCCCcccCceechHhhhhhhccCcCCCCCccccCCCCCCCCCCc
Q 006009          187 KRRGIGQGRRARGDLTASSVMKERQLWLNRDKRIVGSIPGVQIGDVFFFRMELLVVGLHGHSQAGIDYLPGSQSANGEPI  266 (665)
Q Consensus       187 ~~~~~~~~~~~r~dl~a~~~~~~~~~~~~~~~~i~G~vpGv~vGd~f~~R~el~~~GlH~~~~~GI~~~~~~~~~~g~~~  266 (665)
                      .+++||+      .|++....++.  +++..++ ||+||||+|||||++|+||+++|||+++|+|||++.       ..+
T Consensus         5 ~~~~~g~------~~a~~g~~~~~--~~~p~~~-~G~IPGV~VGd~f~~R~el~~~GlH~p~~aGI~g~~-------~~G   68 (231)
T 3oln_A            5 SRRDWGR------GMACVGRTREC--TIVPSNH-YGPIPGIPVGSTWRFRVQVSEAGVHRPHVGGIHGRS-------NDG   68 (231)
T ss_dssp             ---------------------------CCCTTC-CSCCTTCCTTCEESSHHHHHHTTSSCCSSCSEEEET-------TTE
T ss_pred             ccccccc------cccccceeEEE--eecCCcc-CcCCCCCcCcCEEccHHHHhhhCCCCcccCCcccCC-------CCC
Confidence            3455665      55565555543  4455555 799999999999999999999999999999999753       346


Q ss_pred             EEEEEEcCCcCCCCCCCCeEEEEecCCCCCC-----CccccCcccchhhHHHHHhh---------------hcCceeEEE
Q 006009          267 ATSIIVSGGYEDDEDAGDVLIYTGHGGQDKL-----SRQCEHQKLEGGNLAMERSM---------------HYGIEVRVI  326 (665)
Q Consensus       267 A~SIV~SggY~dd~D~gd~liYtG~GG~~~~-----~~~~~dQ~l~~gNlAL~~S~---------------~~~~pVRVi  326 (665)
                      |+|||+||||+||+|+||+|+|||+||+|..     ++|..||+|++||+||++||               +.++|||||
T Consensus        69 A~SIVlSGgYeDD~D~Gd~liYTGsGG~d~~gnkrt~~q~~DQkl~~gNlAL~~Sc~~~~~~k~~~~~~~~~~g~PVRVI  148 (231)
T 3oln_A           69 AYSLVLAGGFADEVDRGDEFTYTGSGGKNLAGNKRIGAPSADQTLTNMNRALALNCDAPLDDKIGAESRNWRAGKPVRVI  148 (231)
T ss_dssp             EEEEEESSCSSTTCBCSSEEEEECCCC-----------CCSCCCSCHHHHHHHHHSSSCCCTTTCEECSSGGGSCCEEEE
T ss_pred             eEEEEecCCccccCCCCCEEEEEcCCCccCcCcccccccccccccccchHHHHhhhhccccccccchhhhhccCCceEEE
Confidence            9999999999999999999999999999863     46899999999999999984               568999999


Q ss_pred             eccccC--CC-CcceeeEecCeEEEEEeEeecCCC-cceEEEEEEEeecCCCCCcch
Q 006009          327 RGFRYQ--GS-VSSKVYVYDGLYKIHDCWFDVGKS-GFGVYKYKLLRIEGQPEMGSA  379 (665)
Q Consensus       327 Rg~k~~--~~-~~~~~yrYDGLY~V~~~w~e~g~~-G~~v~kf~L~R~~gQ~~l~s~  379 (665)
                      ||++..  +. .|.++|||||||+|++||.|+|++ ||.||||+|+|++|||+++.+
T Consensus       149 Rg~k~~k~s~yaP~~gyrYDGLY~V~~~W~e~g~s~G~~V~Kf~L~R~~gQP~~w~~  205 (231)
T 3oln_A          149 RSFKGRKISKYAPEEGNRYDGIYKVVKYWPEISSSHGFLVWRYLLRRDDVEPAPWTS  205 (231)
T ss_dssp             EEGGGTTTCTTSCSSSEEEEEEEEEEEEEEEECTTTCCEEEEEEEEECCSSCCTTSH
T ss_pred             eccccCcCCCccCCCCeEeCeEEEEEEEEeccCCcCCeEEEEEEEEECCCCCCCcch
Confidence            999973  33 389999999999999999999999 999999999999999998654


No 7  
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=100.00  E-value=4.6e-54  Score=452.44  Aligned_cols=246  Identities=27%  Similarity=0.483  Sum_probs=189.6

Q ss_pred             ccccccceeeeeCCCCCCCCCCcEEcccccCCCcccc-CCCCCCCCCCCC--CCCC-CCccccccC-------------C
Q 006009          406 GKKENVPVLLFNDIDGDYEPLYYEYLVRTVFPPFVFT-QGSNGAGCDCVS--GCTD-RCFCAVKNG-------------G  468 (665)
Q Consensus       406 ~G~E~~PV~vvN~vD~e~~P~~F~YI~~~~~~~~~~~-~~~~~~gC~C~~--~C~~-~C~C~~~ng-------------g  468 (665)
                      .++|++||+++|+||++..|+.|+||++++++.++.. ...+..||+|.+  +|.+ +|.|.++++             +
T Consensus         5 ~~~e~~pi~~~N~vd~~~~P~~F~Yi~~~~~~~~~~~~~~~~~~gC~C~~~~~C~~~~C~C~~~~~~~~~~~~~~~~~~~   84 (302)
T 1ml9_A            5 ATHAQLPISIVNREDDAFLNPNFRFIDHSIIGKNVPVADQSFRVGCSCASDEECMYSTCQCLDEMAPDSDEEADPYTRKK   84 (302)
T ss_dssp             ----CCCEEEECSSSSCCCCTTCEECSSCEECTTCCCCCGGGCCCCCCSSTTGGGSTTSGGGTTSCCC-----------C
T ss_pred             ccCCCCCEEEEeCCCCCCCCCCCEEeeeeecCCCccccCcccCCCccCcCCCCcCCCCCcChhhcccccccccccccccc
Confidence            4789999999999999988989999999999887653 234578999998  7975 799999876             4


Q ss_pred             CceecCCC----ce----ecCCCeEeecCCCCCCCCCCcCcccccCCcccEEEEEcCCCCccceecccccCCceEEEeec
Q 006009          469 EFAYDHNG----YL----LRGKPVIFECGAFCQCPPTCRNRVSQRGLRNRLEVFRSRETGWGVRSLDLIHAGAFICEYAG  540 (665)
Q Consensus       469 ~~~Y~~~G----~L----~~~~~~i~EC~~~C~C~~~C~NRv~Q~G~k~~LeVfrT~~kGwGVrA~e~I~kGtFIcEY~G  540 (665)
                      .++|+.+|    +|    +..+.++|||++.|+|+.+|.||++|+|.+.+|+||+|..+||||||+++|++|+||+||+|
T Consensus        85 ~~~y~~~g~~~g~l~~~~~~~~~~i~EC~~~C~C~~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~EY~G  164 (302)
T 1ml9_A           85 RFAYYSQGAKKGLLRDRVLQSQEPIYECHQGCACSKDCPNRVVERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLG  164 (302)
T ss_dssp             CSSBBCSSTTBTSBCHHHHHHCCCEECCCTTCSSCTTCTTCHHHHCCCSCEEEEECSSSCEEEECSSCBCTTCEEEECCC
T ss_pred             ccccccCCcccceeehhcccCCCCeEecCCCCCCCCCCCCcccccCCccceEEEEcCCCceEEEECCeeCCCCEEEEEee
Confidence            58998765    33    23467799999999999999999999999999999999999999999999999999999999


Q ss_pred             eeecHHHHHHhhc------CCCeecccCccccccCcCCCCccccccCCCCCCCCCCCCceEEeccccCCccccccCCCCC
Q 006009          541 VVLTMEQAQIFSM------NGDSLIYPNRFSARWGEWGDLSQVFSDYMRPSHPSIPPLDFAMDVSRMRNVACYISHSPTP  614 (665)
Q Consensus       541 EVit~~ea~~r~~------~~d~ylf~~~~~~~~~~~~dl~~~~~~~~~~~~~~~~~~~~~IDA~~~GNvARFINHSC~P  614 (665)
                      |||+.+|++.|..      ..+.|+|..+.  .|.. ..+..           ......++|||+.+||+||||||||+|
T Consensus       165 evi~~~e~~~R~~~~~~~~~~~~Y~f~l~~--~~~~-~~~d~-----------~~~~~~~~IDa~~~GN~arfiNHSC~P  230 (302)
T 1ml9_A          165 EIITSEEADRRRAESTIARRKDVYLFALDK--FSDP-DSLDP-----------LLAGQPLEVDGEYMSGPTRFINHSCDP  230 (302)
T ss_dssp             EEECHHHHHHHHHHSCGGGCHHHHEEECCS--SCCS-SSSCH-----------HHHSCCCEEECSSEECGGGGCEECSSC
T ss_pred             EEeCHHHHHHHHHHHhhhcCCceEEEEecc--ccCc-ccccc-----------cccCCcEEEeCcccCCHHHhcccCCCC
Confidence            9999999987642      22346664321  0100 00000           001246899999999999999999999


Q ss_pred             CeeEEEEEEcCCCCcccEEEEEEccCCCCCCeEEEecCCCccC------------CCccccCC
Q 006009          615 NVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYGVADEW------------SGKLAICN  665 (665)
Q Consensus       615 N~~~q~V~~d~~d~~~prI~fFA~rdI~pGEELT~DYG~~~~~------------~~k~C~CG  665 (665)
                      |+.++.++.++.+...++|+|||+|||++||||||||+...+.            ....|+||
T Consensus       231 N~~~~~~~~~~~~~~~~~i~~~A~rdI~~GeELt~dY~~~~~~~~~~~~~~~k~~~~~~C~CG  293 (302)
T 1ml9_A          231 NMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLTGLESDAHDPSKISEMTKCLCG  293 (302)
T ss_dssp             SEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEECTTC------------------------
T ss_pred             CeeEEEEEeccCCCCceEEEEEECCCcCCCCEEEEEECCCccccccccccccccCCCcEeeCC
Confidence            9999887777777778999999999999999999999876332            13589997


No 8  
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=100.00  E-value=7.2e-53  Score=442.76  Aligned_cols=232  Identities=29%  Similarity=0.543  Sum_probs=196.7

Q ss_pred             cccccceeeeeCCCCCCCCCCcEEcccccCCCccccCCCCCCCCCCCCCCCC-CCccccccCCCceecCCCcee-cCCCe
Q 006009          407 KKENVPVLLFNDIDGDYEPLYYEYLVRTVFPPFVFTQGSNGAGCDCVSGCTD-RCFCAVKNGGEFAYDHNGYLL-RGKPV  484 (665)
Q Consensus       407 G~E~~PV~vvN~vD~e~~P~~F~YI~~~~~~~~~~~~~~~~~gC~C~~~C~~-~C~C~~~ngg~~~Y~~~G~L~-~~~~~  484 (665)
                      +.+..||+++|+||++.+|..|+||+++++..++........||+|.+ |.+ .| |...+++.++|+.+|+|. ....+
T Consensus        38 ~~~~~~i~~~N~vd~~~~P~~f~yi~~~~~~~~~~~~~~~~~gC~C~~-C~~~~c-c~~~~~~~~~Y~~~g~l~~~~~~~  115 (300)
T 2r3a_A           38 KNHKGMIFVENTVDLEGPPSDFYYINEYKPAPGISLVNEATFGCSCTD-CFFQKC-CPAEAGVLLAYNKNQQIKIPPGTP  115 (300)
T ss_dssp             CCSSSCEEEECSSSCCCCCSSCEECSSCEECTTCCCC---CCCCCCSS-TTTSSC-HHHHTTSCCSBCTTSCBCSCTTCC
T ss_pred             ccCCCCeEEEeCcCCccCCCCEEECcccccCCCCccCCCCCCCcCCcC-CCCCCc-chhhccCccccccCCcEeccCCCc
Confidence            445679999999999988999999999999887654345778999985 976 45 887888899999999985 44577


Q ss_pred             EeecCCCCCCCCCCcCcccccCCcccEEEEEcC-CCCccceecccccCCceEEEeeceeecHHHHHHhhcC----CCeec
Q 006009          485 IFECGAFCQCPPTCRNRVSQRGLRNRLEVFRSR-ETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMN----GDSLI  559 (665)
Q Consensus       485 i~EC~~~C~C~~~C~NRv~Q~G~k~~LeVfrT~-~kGwGVrA~e~I~kGtFIcEY~GEVit~~ea~~r~~~----~d~yl  559 (665)
                      +|||++.|+|++.|.||++|+|++.+|+||+|. .+||||||+++|++|+||+||+||||+.+|++.|...    +..|+
T Consensus       116 i~EC~~~C~C~~~C~Nr~~q~g~~~~l~vfrt~~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~ea~~R~~~y~~~~~~Y~  195 (300)
T 2r3a_A          116 IYECNSRCQCGPDCPNRIVQKGTQYSLCIFRTSNGRGWGVKTLVKIKRMSFVMEYVGEVITSEEAERRGQFYDNKGITYL  195 (300)
T ss_dssp             EECCCTTSSCCTTCTTCSGGGCCCSCEEEEECSSSCCEEEEESSCBCTTCEEEEECCEEEEHHHHHHHHHTCCHHHHHTE
T ss_pred             EEeCCCCCCCCCcCCCccccccccccEEEEEeCCCceEEEEeCccccCCCEeEEEeeEEecHHHHHHHHHHhhhccccEE
Confidence            999999999999999999999999999999997 5999999999999999999999999999999876432    23455


Q ss_pred             ccCccccccCcCCCCccccccCCCCCCCCCCCCceEEeccccCCccccccCCCCCCeeEEEEEEcCCCCcccEEEEEEcc
Q 006009          560 YPNRFSARWGEWGDLSQVFSDYMRPSHPSIPPLDFAMDVSRMRNVACYISHSPTPNVMVQFVLYDHNNLMFPHLMLFALE  639 (665)
Q Consensus       560 f~~~~~~~~~~~~dl~~~~~~~~~~~~~~~~~~~~~IDA~~~GNvARFINHSC~PN~~~q~V~~d~~d~~~prI~fFA~r  639 (665)
                      |..++                         ....++|||+.+||++|||||||+||+.++.|++++.+...++|+|||+|
T Consensus       196 f~l~~-------------------------~~~~~~IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~r  250 (300)
T 2r3a_A          196 FDLDY-------------------------ESDEFTVDAARYGNVSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTR  250 (300)
T ss_dssp             EECCS-------------------------SCSSEEEECSSEECGGGGCEECSSCSEEEEEEESSCCCTTSCEEEEEESS
T ss_pred             EEeec-------------------------CCceEEEecccccChHHheecCCCCCEEEEEEEeccCCCCceEEEEEEcc
Confidence            52210                         12368999999999999999999999999999999888888999999999


Q ss_pred             CCCCCCeEEEecCCCccC---------------CCccccCC
Q 006009          640 NIPPLRELSIDYGVADEW---------------SGKLAICN  665 (665)
Q Consensus       640 dI~pGEELT~DYG~~~~~---------------~~k~C~CG  665 (665)
                      ||++||||||||++....               ....|+||
T Consensus       251 dI~~GEELt~dY~~~~~~~~~~~~~d~~~~~~~~~~~C~CG  291 (300)
T 2r3a_A          251 TINAGEELTFDYQMKGSGDISSDSIDHSPAKKRVRTVCKCG  291 (300)
T ss_dssp             CBCTTCEEEECGGGSSCC--------------CCCCBCCCC
T ss_pred             CCCCCCEEEEECCCCccccccccccccccccccCCCEeeCC
Confidence            999999999999987321               24689998


No 9  
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=100.00  E-value=1.2e-51  Score=431.81  Aligned_cols=236  Identities=33%  Similarity=0.577  Sum_probs=191.0

Q ss_pred             eeeccccccccceeeeeCCCCCCCCCCcEEcccccCCCccccC--CCCCCCCCCCC-CCCC-CCccccccCCCceecCCC
Q 006009          401 SLDISGKKENVPVLLFNDIDGDYEPLYYEYLVRTVFPPFVFTQ--GSNGAGCDCVS-GCTD-RCFCAVKNGGEFAYDHNG  476 (665)
Q Consensus       401 ~~DiS~G~E~~PV~vvN~vD~e~~P~~F~YI~~~~~~~~~~~~--~~~~~gC~C~~-~C~~-~C~C~~~ngg~~~Y~~~G  476 (665)
                      ..|||+|+|++||+++|+   +..|..|+||+++++..++...  .....||+|.+ .|.+ .|.|.+++   ..|+.++
T Consensus        14 ~~Dis~G~E~~pi~~~n~---~~~p~~f~Y~~~~~~~~~~~~~~~~~~~~gC~C~~~~C~~~~C~C~~~~---~~y~~~~   87 (290)
T 3bo5_A           14 QLDVACGQENLPVGAWPP---GAAPAPFQYTPDHVVGPGADIDPTQITFPGCICVKTPCLPGTCSCLRHG---ENYDDNS   87 (290)
T ss_dssp             CSCTTTTCSSSCCEEEST---TCCCCCCEECSSCEECTTCSSCTTSCCCCCCCCCSSCCCTTTCGGGTTS---CSBCTTS
T ss_pred             chhhhCCCCCCceeeECC---CCCCCCcEEeeceecCCCCcCCcccccCCCCCCCCCCcCCCCCcchhhc---CccCccc
Confidence            469999999999999998   3457899999999887665422  22457999987 5874 79999864   4788877


Q ss_pred             cee------cCCCeEeecCCCCCCCCCCcCcccccCCcccEEEEEcCCCCccceecccccCCceEEEeeceeecHHHHHH
Q 006009          477 YLL------RGKPVIFECGAFCQCPPTCRNRVSQRGLRNRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQI  550 (665)
Q Consensus       477 ~L~------~~~~~i~EC~~~C~C~~~C~NRv~Q~G~k~~LeVfrT~~kGwGVrA~e~I~kGtFIcEY~GEVit~~ea~~  550 (665)
                      +|.      ....++|||++.|+|+..|.||++|+|++.+|+||+|..+||||||+++|++|+||+||+||||+.+|+++
T Consensus        88 ~l~~~~~~~~~~~~~~EC~~~C~C~~~C~Nr~~q~g~~~~l~V~~s~~~G~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~  167 (290)
T 3bo5_A           88 CLRDIGSGGKYAEPVFECNVLCRCSDHCRNRVVQKGLQFHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVLGFSEVQR  167 (290)
T ss_dssp             CBCC-----CCCCCEECCCTTCCSCTTCTTCCGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHH
T ss_pred             cccccccccccCCceEeCCCCCCCCCCCCCeEcccCCcccEEEEEcCCCcceEeECCccCCCCEEEEEeeEEeCHHHHHH
Confidence            764      23457999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             hhc----CCCeecccCccccccCcCCCCccccccCCCCCCCCCCCCceEEeccccCCccccccCCCCCCeeEEEEEEcCC
Q 006009          551 FSM----NGDSLIYPNRFSARWGEWGDLSQVFSDYMRPSHPSIPPLDFAMDVSRMRNVACYISHSPTPNVMVQFVLYDHN  626 (665)
Q Consensus       551 r~~----~~d~ylf~~~~~~~~~~~~dl~~~~~~~~~~~~~~~~~~~~~IDA~~~GNvARFINHSC~PN~~~q~V~~d~~  626 (665)
                      |..    .+..|+|..+.      .     .+         ......++|||+++||+||||||||+||+.++.|.+++.
T Consensus       168 R~~~~~~~~~~Y~~~l~~------~-----~~---------~~~~~~~~IDa~~~GN~arfiNHSC~PN~~~~~~~~~~~  227 (290)
T 3bo5_A          168 RIHLQTKSDSNYIIAIRE------H-----VY---------NGQVMETFVDPTYIGNIGRFLNHSCEPNLLMIPVRIDSM  227 (290)
T ss_dssp             HHTTCCSSCCCCCEEEEE------C-----C--------------EEEEEEEEEEECGGGGCEECSSCSEEEEEEESSSS
T ss_pred             HHHhhcccCCcceeeecc------c-----cc---------CCccceeEEeeeecCCchheeeecCCCCEEEEEEEeCCC
Confidence            643    23345552210      0     00         001125799999999999999999999999998887652


Q ss_pred             CCcccEEEEEEccCCCCCCeEEEecCCCccC--------------CCccccCC
Q 006009          627 NLMFPHLMLFALENIPPLRELSIDYGVADEW--------------SGKLAICN  665 (665)
Q Consensus       627 d~~~prI~fFA~rdI~pGEELT~DYG~~~~~--------------~~k~C~CG  665 (665)
                         .++|+|||+|||++||||||||+...+.              ....|+||
T Consensus       228 ---~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~~~~~~~~~~~~C~CG  277 (290)
T 3bo5_A          228 ---VPKLALFAAKDIVPEEELSYDYSGRYLNLTVSASKERLDHGKLRKPCYCG  277 (290)
T ss_dssp             ---SCEEEEEESSCBCTTCEEEECTTSCTTCCSSSEEEEEEECSSCCCBCCCC
T ss_pred             ---ceEEEEEEccccCCCCEEEEECCCccccccccccccccccCCCCccccCC
Confidence               5799999999999999999999976321              24689998


No 10 
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=100.00  E-value=9.4e-45  Score=377.35  Aligned_cols=205  Identities=21%  Similarity=0.386  Sum_probs=163.1

Q ss_pred             cceeeeeCCCCCCCCCCcEEcccccCCCccccCC----CCCCCCCCCC-----------CCCCCCccccccCCCceecCC
Q 006009          411 VPVLLFNDIDGDYEPLYYEYLVRTVFPPFVFTQG----SNGAGCDCVS-----------GCTDRCFCAVKNGGEFAYDHN  475 (665)
Q Consensus       411 ~PV~vvN~vD~e~~P~~F~YI~~~~~~~~~~~~~----~~~~gC~C~~-----------~C~~~C~C~~~ngg~~~Y~~~  475 (665)
                      +|..+.+.......|+.|++|.+|+|........    ....-|+|..           .|..+|.|+.           
T Consensus        23 ~~~~~~~~~~~~~~p~~~~~i~~n~y~~~~~~~~~~~~~~~~~C~C~~~~~~~~~~~~~~C~~~C~nr~-----------   91 (278)
T 3h6l_A           23 DPQRWKECAKQGKMPCYFDLIEENVYLTERKKNKSHRDIKRMQCECTPLSKDERAQGEIACGEDCLNRL-----------   91 (278)
T ss_dssp             CHHHHHHHHHTTSSCCCCEECSSCEECC--------------CCCCCCCCHHHHHHTCCSSCTTCTTGG-----------
T ss_pred             CcHHHHHHHhcccCCCCceEeeeeeccccccccccccccccceeeccCCCcccccccCCCCCCCCCCcc-----------
Confidence            3444444444455678999999999986432111    1245799975           6888888765           


Q ss_pred             CceecCCCeEeecCCCCCCCCCCcCcccccCCcccEEEEEcCCCCccceecccccCCceEEEeeceeecHHHHHHhhcC-
Q 006009          476 GYLLRGKPVIFECGAFCQCPPTCRNRVSQRGLRNRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMN-  554 (665)
Q Consensus       476 G~L~~~~~~i~EC~~~C~C~~~C~NRv~Q~G~k~~LeVfrT~~kGwGVrA~e~I~kGtFIcEY~GEVit~~ea~~r~~~-  554 (665)
                              ++|||++.|+|+.+|.||++|+|...+|+||+|+.+||||||+++|++|+||+||+||||+.++++.+... 
T Consensus        92 --------~~~EC~~~C~C~~~C~Nr~~q~g~~~~leV~~t~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y  163 (278)
T 3h6l_A           92 --------LMIECSSRCPNGDYCSNRRFQRKQHADVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLDHKEFKARVKEY  163 (278)
T ss_dssp             --------GTBCCCTTCTTGGGCSSCTTTTTCCCCEEEEECSSSCEEEEESSCBCTTCEEEECCCEEECHHHHHHHHHHH
T ss_pred             --------eEeccCCCCCcCCCCCCccccCCCccCEEEEEcCCCceEEEeCCccCCCCEeEEeeeeecCHHHHHHHHHHH
Confidence                    48999999999999999999999999999999999999999999999999999999999999998765321 


Q ss_pred             ----CCeecccCccccccCcCCCCccccccCCCCCCCCCCCCceEEeccccCCccccccCCCCCCeeEEEEEEcCCCCcc
Q 006009          555 ----GDSLIYPNRFSARWGEWGDLSQVFSDYMRPSHPSIPPLDFAMDVSRMRNVACYISHSPTPNVMVQFVLYDHNNLMF  630 (665)
Q Consensus       555 ----~d~ylf~~~~~~~~~~~~dl~~~~~~~~~~~~~~~~~~~~~IDA~~~GNvARFINHSC~PN~~~q~V~~d~~d~~~  630 (665)
                          +..|.|                           .....+++|||+.+||+||||||||+|||.++.|.+++.    
T Consensus       164 ~~~~~~~~y~---------------------------~~l~~~~~IDa~~~GN~aRFiNHSC~PN~~~~~~~v~g~----  212 (278)
T 3h6l_A          164 ARNKNIHYYF---------------------------MALKNDEIIDATQKGNCSRFMNHSCEPNCETQKWTVNGQ----  212 (278)
T ss_dssp             HHTTCCCCCE---------------------------EEEETTEEEECSSEECGGGGCEECSSCSEEEEEEEETTE----
T ss_pred             HhccCcccee---------------------------ecccCCeEEeCcccCChhhhcccCCCCCceeEEEEeCCc----
Confidence                111111                           001235799999999999999999999999999998864    


Q ss_pred             cEEEEEEccCCCCCCeEEEecCCCc-cCCCccccCC
Q 006009          631 PHLMLFALENIPPLRELSIDYGVAD-EWSGKLAICN  665 (665)
Q Consensus       631 prI~fFA~rdI~pGEELT~DYG~~~-~~~~k~C~CG  665 (665)
                      ++|+|||+|||++||||||||+++. ......|+||
T Consensus       213 ~ri~~fA~RdI~~GEELT~dY~~~~~~~~~~~C~CG  248 (278)
T 3h6l_A          213 LRVGFFTTKLVPSGSELTFDYQFQRYGKEAQKCFCG  248 (278)
T ss_dssp             EEEEEEESSCBCTTCBCEECCTTTEECSSCEECCCC
T ss_pred             eEEEEEECCccCCCCEEEEecCCCcCCCCCcEeECC
Confidence            7999999999999999999999983 3567899998


No 11 
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=100.00  E-value=4e-43  Score=354.22  Aligned_cols=188  Identities=30%  Similarity=0.525  Sum_probs=155.7

Q ss_pred             CcEEcccccCCCccccCCCCCCCCCCCC-------CCCCCCccccccCCCceecCCCceecCCCeEeecCC-CCCCCCCC
Q 006009          427 YYEYLVRTVFPPFVFTQGSNGAGCDCVS-------GCTDRCFCAVKNGGEFAYDHNGYLLRGKPVIFECGA-FCQCPPTC  498 (665)
Q Consensus       427 ~F~YI~~~~~~~~~~~~~~~~~gC~C~~-------~C~~~C~C~~~ngg~~~Y~~~G~L~~~~~~i~EC~~-~C~C~~~C  498 (665)
                      .|+.|.+|+|.............|+|..       +|.++|.|+.                   +++||++ .|+|+..|
T Consensus         2 ~~~~i~~n~~~~~~~~~~~~~~~C~C~~~~~~~~~~c~~~C~nr~-------------------~~~EC~~~~C~C~~~C   62 (222)
T 3ope_A            2 SYKKIRSNVYVDVKPLSGYEATTCNCKKPDDDTRKGCVDDCLNRM-------------------IFAECSPNTCPCGEQC   62 (222)
T ss_dssp             CCEECSSCEECSCCCBCCCCCCCCCCCCCSCSSSCSSCSCCTTGG-------------------GTBCCCTTTCTTTTSC
T ss_pred             CccCcccceeeeeccCccccCccccCcCCCcCCCCCCcccCcCcC-------------------eEeEeCCCCCcCCCCC
Confidence            4899999998764333344677899985       4777777765                   4799998 89999999


Q ss_pred             cCcccccCCcc-cEEEEEcCCCCccceecccccCCceEEEeeceeecHHHHHHhhcC-----CCeecccCccccccCcCC
Q 006009          499 RNRVSQRGLRN-RLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMN-----GDSLIYPNRFSARWGEWG  572 (665)
Q Consensus       499 ~NRv~Q~G~k~-~LeVfrT~~kGwGVrA~e~I~kGtFIcEY~GEVit~~ea~~r~~~-----~d~ylf~~~~~~~~~~~~  572 (665)
                      .||++|++... +|+||+|+.+||||||+++|++|+||+||+|||++.+|++.+...     .+.|+|.           
T Consensus        63 ~Nr~~q~~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~y~~~-----------  131 (222)
T 3ope_A           63 CNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRMIEQYHNHSDHYCLN-----------  131 (222)
T ss_dssp             SSCTTTTTCCCSCCEEEECTTSSEEEECSSCBCTTCEEEECCSEEECHHHHHHHHHHTSTTCCSCCEEE-----------
T ss_pred             CCceEeCCCccccEEEEEcCCCceEEEECceECCCCEEEEecceecCHHHHHHHHHHHhcccCCeEEEe-----------
Confidence            99999998655 599999999999999999999999999999999999988765311     1222221           


Q ss_pred             CCccccccCCCCCCCCCCCCceEEeccccCCccccccCCCCCCeeEEEEEEcCCCCcccEEEEEEccCCCCCCeEEEecC
Q 006009          573 DLSQVFSDYMRPSHPSIPPLDFAMDVSRMRNVACYISHSPTPNVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYG  652 (665)
Q Consensus       573 dl~~~~~~~~~~~~~~~~~~~~~IDA~~~GNvARFINHSC~PN~~~q~V~~d~~d~~~prI~fFA~rdI~pGEELT~DYG  652 (665)
                                       .+..++|||+.+||+||||||||+||+.++.|.+++    .++|+|||+|||++||||||||+
T Consensus       132 -----------------l~~~~~IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~----~~~i~~~A~RdI~~GEELT~dY~  190 (222)
T 3ope_A          132 -----------------LDSGMVIDSYRMGNEARFINHSCDPNCEMQKWSVNG----VYRIGLYALKDMPAGTELTYDYN  190 (222)
T ss_dssp             -----------------EETTEEEECSSEECGGGGCEECSSCSEEEEEEEETT----EEEEEEEESSCBCTTCBCEECTT
T ss_pred             -----------------cCCCEEEeCccccccceeeccCCCCCeEeEEEEECC----eEEEEEEECCccCCCCEEEEECC
Confidence                             123689999999999999999999999999988876    48999999999999999999999


Q ss_pred             CCcc--CCCccccCC
Q 006009          653 VADE--WSGKLAICN  665 (665)
Q Consensus       653 ~~~~--~~~k~C~CG  665 (665)
                      ++.+  .....|+||
T Consensus       191 ~~~~~~~~~~~C~CG  205 (222)
T 3ope_A          191 FHSFNVEKQQLCKCG  205 (222)
T ss_dssp             SSBCCCSCCCBCCCC
T ss_pred             CcccCCcCCCEeeCC
Confidence            9843  345789998


No 12 
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=100.00  E-value=4.9e-43  Score=355.88  Aligned_cols=192  Identities=23%  Similarity=0.414  Sum_probs=158.0

Q ss_pred             CCCCCcEEcccccCCCccc---cCCCCCCCCCCCCC----CC--CCCccccccCCCceecCCCceecCCCeEeecCC-CC
Q 006009          423 YEPLYYEYLVRTVFPPFVF---TQGSNGAGCDCVSG----CT--DRCFCAVKNGGEFAYDHNGYLLRGKPVIFECGA-FC  492 (665)
Q Consensus       423 ~~P~~F~YI~~~~~~~~~~---~~~~~~~gC~C~~~----C~--~~C~C~~~ngg~~~Y~~~G~L~~~~~~i~EC~~-~C  492 (665)
                      +.|+.|+.|.+|++...+.   .+......|+|...    |.  ++|.|+.                   ++|||++ .|
T Consensus        15 ~~pp~y~~i~~n~~~~~~~~~~~~~~~~~~C~C~~~~~~~C~~~~~C~nr~-------------------~~~EC~~~~C   75 (232)
T 3ooi_A           15 KKPPPYKHIKVNRPIGRVQIFTADLSEIPRCNCKATDENPCGIDSECINRM-------------------LLYECHPTVC   75 (232)
T ss_dssp             CSCCCCEECSSCEECTTCCCCCCCGGGSCCCSCCTTSSSTTCTTSCCHHHH-------------------TTBCCCTTTC
T ss_pred             CCCCCceEeeccccccccccccCCcccCCcccccCCCCCCCCCCCCCcCcC-------------------ceeEeCCCCC
Confidence            4577899999998765432   22235678999875    54  3455543                   4899999 79


Q ss_pred             CCCCCCcCcccccCCcccEEEEEcCCCCccceecccccCCceEEEeeceeecHHHHHHhhc----CC--CeecccCcccc
Q 006009          493 QCPPTCRNRVSQRGLRNRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSM----NG--DSLIYPNRFSA  566 (665)
Q Consensus       493 ~C~~~C~NRv~Q~G~k~~LeVfrT~~kGwGVrA~e~I~kGtFIcEY~GEVit~~ea~~r~~----~~--d~ylf~~~~~~  566 (665)
                      +|+..|.||++|++...+|+||+|+.+||||||+++|++|+||+||+|||++.++++.+..    .+  ..|++      
T Consensus        76 ~c~~~C~Nr~~q~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~------  149 (232)
T 3ooi_A           76 PAGGRCQNQCFSKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYAQEHDITNFYML------  149 (232)
T ss_dssp             TTGGGCCCCHHHHTCCCCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHHHHHHTTCCCCCEE------
T ss_pred             CCCCCcCCccccCCCCccEEEEEcCCceeEEEECceecCCceeeEeeeeccCHHHHHHHHHHHhhcCCCceeee------
Confidence            9999999999999999999999999999999999999999999999999999999876532    11  11221      


Q ss_pred             ccCcCCCCccccccCCCCCCCCCCCCceEEeccccCCccccccCCCCCCeeEEEEEEcCCCCcccEEEEEEccCCCCCCe
Q 006009          567 RWGEWGDLSQVFSDYMRPSHPSIPPLDFAMDVSRMRNVACYISHSPTPNVMVQFVLYDHNNLMFPHLMLFALENIPPLRE  646 (665)
Q Consensus       567 ~~~~~~dl~~~~~~~~~~~~~~~~~~~~~IDA~~~GNvARFINHSC~PN~~~q~V~~d~~d~~~prI~fFA~rdI~pGEE  646 (665)
                                            ..+.+++|||+.+||+||||||||+||+.++.|.+++.    ++|+|||+|||++|||
T Consensus       150 ----------------------~l~~~~~IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~----~~i~~~A~RdI~~GEE  203 (232)
T 3ooi_A          150 ----------------------TLDKDRIIDAGPKGNYARFMNHCCQPNCETQKWSVNGD----TRVGLFALSDIKAGTE  203 (232)
T ss_dssp             ----------------------EEETTEEEEEEEEECGGGGCEECSSCSEEEEEEEETTE----EEEEEEESSCBCTTCB
T ss_pred             ----------------------ecCcceEEeccccccccccccccCCCCeEEEEEEECCc----eEEEEEECCccCCCCE
Confidence                                  01235899999999999999999999999999988764    7999999999999999


Q ss_pred             EEEecCCCc-cCCCccccCC
Q 006009          647 LSIDYGVAD-EWSGKLAICN  665 (665)
Q Consensus       647 LT~DYG~~~-~~~~k~C~CG  665 (665)
                      |||||+.+. ......|+||
T Consensus       204 LT~dY~~~~~~~~~~~C~CG  223 (232)
T 3ooi_A          204 LTFNYNLECLGNGKTVCKCG  223 (232)
T ss_dssp             CEECCTTCSTTCTTCBCCCC
T ss_pred             EEEECCCCcCCCCCcEeECC
Confidence            999999984 4456899998


No 13 
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=99.98  E-value=3.1e-33  Score=276.44  Aligned_cols=141  Identities=26%  Similarity=0.319  Sum_probs=116.5

Q ss_pred             CCCCCCcCcccccCCcccEEEEEcCCCCccceecccccCCceEEEeeceeecHHHHHHhhc-----CCCeecccCccccc
Q 006009          493 QCPPTCRNRVSQRGLRNRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSM-----NGDSLIYPNRFSAR  567 (665)
Q Consensus       493 ~C~~~C~NRv~Q~G~k~~LeVfrT~~kGwGVrA~e~I~kGtFIcEY~GEVit~~ea~~r~~-----~~d~ylf~~~~~~~  567 (665)
                      .|...|+++.+|++.+.+|+||+++.+||||||+++|++|+||+||+|||++..+++.|..     ....|+|.      
T Consensus        36 ~~~~~~~~~~l~~~~~~~l~V~~s~~~G~GlfA~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~~~~~~~Y~f~------  109 (192)
T 2w5y_A           36 DLPMPMRFRHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKYYDSKGIGCYMFR------  109 (192)
T ss_dssp             SCCHHHHHTTHHHHHHHHEEEEECSSSSEEEEESSCBCTTCEEEECCSEEEEGGGHHHHHHHHHHHTCCCCEEE------
T ss_pred             CCCcchhHHHHhccCCCcEEEEEcCCceeEEEECcccCCCCEEEEeeeeEechHHHHHHHHHHhhcCCceeeee------
Confidence            4445788999999999999999999999999999999999999999999999988776532     11123331      


Q ss_pred             cCcCCCCccccccCCCCCCCCCCCCceEEeccccCCccccccCCCCCCeeEEEEEEcCCCCcccEEEEEEccCCCCCCeE
Q 006009          568 WGEWGDLSQVFSDYMRPSHPSIPPLDFAMDVSRMRNVACYISHSPTPNVMVQFVLYDHNNLMFPHLMLFALENIPPLREL  647 (665)
Q Consensus       568 ~~~~~dl~~~~~~~~~~~~~~~~~~~~~IDA~~~GNvARFINHSC~PN~~~q~V~~d~~d~~~prI~fFA~rdI~pGEEL  647 (665)
                                            .+..++|||+.+||++|||||||+|||.++.|.+++.    ++|+|||+|||++||||
T Consensus       110 ----------------------l~~~~~IDa~~~Gn~arfiNHSC~PN~~~~~~~~~g~----~~i~i~A~rdI~~GEEL  163 (192)
T 2w5y_A          110 ----------------------IDDSEVVDATMHGNAARFINHSCEPNCYSRVINIDGQ----KHIVIFAMRKIYRGEEL  163 (192)
T ss_dssp             ----------------------CSSSEEEECTTTCCGGGGCEECSSCSEEEEEEEETTE----EEEEEEESSCBCTTCEE
T ss_pred             ----------------------ecCceEEECccccChhHhhccCCCCCEEEEEEEECCc----EEEEEEECcccCCCCEE
Confidence                                  1235799999999999999999999999998888763    79999999999999999


Q ss_pred             EEecCCCccC--CCccccCC
Q 006009          648 SIDYGVADEW--SGKLAICN  665 (665)
Q Consensus       648 T~DYG~~~~~--~~k~C~CG  665 (665)
                      ||||+...+.  ....|.||
T Consensus       164 t~dY~~~~~~~~~~~~C~Cg  183 (192)
T 2w5y_A          164 TYDYKFPIEDASNKLPCNCG  183 (192)
T ss_dssp             EECCCC-------CCBCCCC
T ss_pred             EEEcCCchhcCCCCceeECC
Confidence            9999988443  46799997


No 14 
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=99.97  E-value=2.3e-32  Score=262.62  Aligned_cols=137  Identities=21%  Similarity=0.318  Sum_probs=112.4

Q ss_pred             CcCcccccCCcccEEEEEcCCCCccceecccccCCceEEEeeceeecHHHHHHhhc------CCCeecccCccccccCcC
Q 006009          498 CRNRVSQRGLRNRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSM------NGDSLIYPNRFSARWGEW  571 (665)
Q Consensus       498 C~NRv~Q~G~k~~LeVfrT~~kGwGVrA~e~I~kGtFIcEY~GEVit~~ea~~r~~------~~d~ylf~~~~~~~~~~~  571 (665)
                      ..++++|+|...+|+|++++.+||||||.++|++|+||+||+||+++..+++.+..      ....|+|...        
T Consensus        19 ~~~~~~q~g~~~~l~v~~~~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~y~~~~~--------   90 (166)
T 3f9x_A           19 RIDELIESGKEEGMKIDLIDGKGRGVIATKQFSRGDFVVEYHGDLIEITDAKKREALYAQDPSTGCYMYYFQ--------   90 (166)
T ss_dssp             HHHHHHHHTCCTTEEEEEETTTEEEEEESSCBCTTCEEEECCSEEEEHHHHHHHHHHHTTCTTSCCCEEEEE--------
T ss_pred             HHHHHHHcCCccCeEEEECCCceeEEEECCCcCCCCEEEEeeceEcCHHHHHHHHHHHhhccCCCceEEEEe--------
Confidence            46789999999999999999999999999999999999999999999999886642      1112222100        


Q ss_pred             CCCccccccCCCCCCCCCCCCceEEecccc-CCccccccCCCCCCeeEEEEEEcCCCCcccEEEEEEccCCCCCCeEEEe
Q 006009          572 GDLSQVFSDYMRPSHPSIPPLDFAMDVSRM-RNVACYISHSPTPNVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSID  650 (665)
Q Consensus       572 ~dl~~~~~~~~~~~~~~~~~~~~~IDA~~~-GNvARFINHSC~PN~~~q~V~~d~~d~~~prI~fFA~rdI~pGEELT~D  650 (665)
                                       ..+..++|||+.. ||++|||||||+|||.++.+..++    .++|+|||+|||++|||||||
T Consensus        91 -----------------~~~~~~~iDa~~~~Gn~aRfiNHSC~PN~~~~~~~~~~----~~~i~~~A~rdI~~GEELt~d  149 (166)
T 3f9x_A           91 -----------------YLSKTYCVDATRETNRLGRLINHSKCGNCQTKLHDIDG----VPHLILIASRDIAAGEELLFD  149 (166)
T ss_dssp             -----------------ETTEEEEEECCSCCSCSGGGCEECTTCSEEEEEEEETT----EEEEEEEESSCBCTTCBCEEC
T ss_pred             -----------------cCCCCeEEechhcCCChhheeecCCCCCeeEEEEEECC----eeEEEEEECCcCCCCCEEEEE
Confidence                             0123689999996 999999999999999999888875    489999999999999999999


Q ss_pred             cCCCcc--CCCcccc
Q 006009          651 YGVADE--WSGKLAI  663 (665)
Q Consensus       651 YG~~~~--~~~k~C~  663 (665)
                      |+....  .....|+
T Consensus       150 Y~~~~~~~~~~~~~L  164 (166)
T 3f9x_A          150 YGDRSKASIEAHPWL  164 (166)
T ss_dssp             CCCCCHHHHHHCGGG
T ss_pred             cCCChhhHhhhCchh
Confidence            998843  3334444


No 15 
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=99.95  E-value=1e-27  Score=247.34  Aligned_cols=141  Identities=18%  Similarity=0.187  Sum_probs=109.6

Q ss_pred             CeEeecCCCCCCCCCCcCcccccCC-cccEEEEEcCC--CCccceecccccCCceEEEeeceeecHHHHHHhhcCCCeec
Q 006009          483 PVIFECGAFCQCPPTCRNRVSQRGL-RNRLEVFRSRE--TGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMNGDSLI  559 (665)
Q Consensus       483 ~~i~EC~~~C~C~~~C~NRv~Q~G~-k~~LeVfrT~~--kGwGVrA~e~I~kGtFIcEY~GEVit~~ea~~r~~~~d~yl  559 (665)
                      ..+|+|+..|.. ..|.|+++.... ...++|.++..  |||||||+++|++|+||+||+||+|+.++++.|....+.|.
T Consensus        83 ~~~~~~d~~~~~-~i~~~~~~~~~~~~~~~~v~~S~i~~kG~GvfA~~~I~~G~~I~eY~Gevi~~~e~~~R~~~~~~~~  161 (261)
T 2f69_A           83 NSVYHFDKSTSS-CISTNALLPDPYESERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALNGNT  161 (261)
T ss_dssp             CCEECCCCCCSS-CSCSCTTSCCHHHHTTEEEEECSSTTCCEEEEESSCBCTTCEEEEECCEEECHHHHHTSCGGGCSSC
T ss_pred             CceEecCcccCc-ceeCccccCCcccCceEEEEecCCCCCceEEEECcccCCCCEEEEEeeEEeCHHHHHHHhhhhccce
Confidence            358999986653 247777776653 46799999875  59999999999999999999999999999887543222222


Q ss_pred             ccCccccccCcCCCCccccccCCCCCCCCCCCCceEEecc--------ccCCccccccCCCCCCeeEEEEEEcCCCCcc-
Q 006009          560 YPNRFSARWGEWGDLSQVFSDYMRPSHPSIPPLDFAMDVS--------RMRNVACYISHSPTPNVMVQFVLYDHNNLMF-  630 (665)
Q Consensus       560 f~~~~~~~~~~~~dl~~~~~~~~~~~~~~~~~~~~~IDA~--------~~GNvARFINHSC~PN~~~q~V~~d~~d~~~-  630 (665)
                      |                            .....++|||.        .+||++|||||||+|||.++.|..    +++ 
T Consensus       162 f----------------------------~l~~~~~IDa~~~~~~~~~~~Gn~aRfiNHSC~PN~~~~~~~~----~~~~  209 (261)
T 2f69_A          162 L----------------------------SLDEETVIDVPEPYNHVSKYCASLGHKANHSFTPNCIYDMFVH----PRFG  209 (261)
T ss_dssp             E----------------------------ECSSSCEEECCTTTTSTTTCCSCCGGGCEECSSCSEEEEEEEE----TTTE
T ss_pred             e----------------------------eecCCeEEEccccccccccccccceeeEeeCCCCCeEEEEEEc----CCCC
Confidence            2                            01235789995        599999999999999999988732    222 


Q ss_pred             cEEEEEEccCCCCCCeEEEecCCCcc
Q 006009          631 PHLMLFALENIPPLRELSIDYGVADE  656 (665)
Q Consensus       631 prI~fFA~rdI~pGEELT~DYG~~~~  656 (665)
                      .+|+|||+|||++||||||||++...
T Consensus       210 ~~i~i~A~RdI~~GEELt~dYg~~~~  235 (261)
T 2f69_A          210 PIKCIRTLRAVEADEELTVAYGYDHS  235 (261)
T ss_dssp             EEEEEEESSCBCTTCEEEECCCCCSC
T ss_pred             cEEEEEECcccCCCCEEEEEcCCccc
Confidence            34599999999999999999998743


No 16 
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=99.93  E-value=8.6e-26  Score=235.89  Aligned_cols=119  Identities=19%  Similarity=0.193  Sum_probs=95.1

Q ss_pred             cccEEEEEcCC--CCccceecccccCCceEEEeeceeecHHHHHHhhcCCCeecccCccccccCcCCCCccccccCCCCC
Q 006009          508 RNRLEVFRSRE--TGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMNGDSLIYPNRFSARWGEWGDLSQVFSDYMRPS  585 (665)
Q Consensus       508 k~~LeVfrT~~--kGwGVrA~e~I~kGtFIcEY~GEVit~~ea~~r~~~~d~ylf~~~~~~~~~~~~dl~~~~~~~~~~~  585 (665)
                      ..+++|+++..  |||||||+++|++|+||+||+||+|+.++++.|....+.+.|.                        
T Consensus       162 ~~~~~v~~S~i~GkG~Gvfa~~~I~~G~~I~ey~Ge~i~~~~~~~r~~~~~~~~~~------------------------  217 (293)
T 1h3i_A          162 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALNGNTLS------------------------  217 (293)
T ss_dssp             HTTEEEEECSSSSSSEEEEESSCBCTTCEEEEECCEEECHHHHHHSCGGGCTTEEE------------------------
T ss_pred             ceeEEEeeeecCCCcceEEECCcCCCCCEEEEeccEEcCHHHHhHHhhhcccCEEe------------------------
Confidence            34789999876  5599999999999999999999999999998764322222220                        


Q ss_pred             CCCCCCCceEEec--------cccCCccccccCCCCCCeeEEEEEEcCCCCcccE-EEEEEccCCCCCCeEEEecCCCcc
Q 006009          586 HPSIPPLDFAMDV--------SRMRNVACYISHSPTPNVMVQFVLYDHNNLMFPH-LMLFALENIPPLRELSIDYGVADE  656 (665)
Q Consensus       586 ~~~~~~~~~~IDA--------~~~GNvARFINHSC~PN~~~q~V~~d~~d~~~pr-I~fFA~rdI~pGEELT~DYG~~~~  656 (665)
                          ....++|||        +.+||+||||||||+|||.++.|..    +++.+ |+|||+|||++||||||||+++..
T Consensus       218 ----l~~~~~iDa~~~~~~~~~~~gn~ar~iNHsc~pN~~~~~~~~----~~~~~~~~~~a~r~I~~geElt~~Yg~~~~  289 (293)
T 1h3i_A          218 ----LDEETVIDVPEPYNHVSKYCASLGHKANHSFTPNCIYDMFVH----PRFGPIKCIRTLRAVEADEELTVAYGYDHS  289 (293)
T ss_dssp             ----CSSSCEEECCTTTTSTTTCCSCCGGGSEEESSCSEEEEEEEE----TTTEEEEEEEESSCBCTTCEEEEEEETTBC
T ss_pred             ----cCCCEEEeCcccccccceeeccceeeeccCCCCCeEEEEEEc----CCCCcEEEEEECCccCCCCEEEEecCCCCC
Confidence                123578999        7799999999999999999988733    22235 589999999999999999999854


Q ss_pred             CC
Q 006009          657 WS  658 (665)
Q Consensus       657 ~~  658 (665)
                      ..
T Consensus       290 ~~  291 (293)
T 1h3i_A          290 PP  291 (293)
T ss_dssp             CS
T ss_pred             CC
Confidence            43


No 17 
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=99.92  E-value=4.8e-26  Score=216.60  Aligned_cols=121  Identities=20%  Similarity=0.235  Sum_probs=96.4

Q ss_pred             CCcCcccccCCcccEEEEEcC--CCCccceecccccCCceEEEeeceeecHHHHHHhhcCCCeecccCccccccCcCCCC
Q 006009          497 TCRNRVSQRGLRNRLEVFRSR--ETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMNGDSLIYPNRFSARWGEWGDL  574 (665)
Q Consensus       497 ~C~NRv~Q~G~k~~LeVfrT~--~kGwGVrA~e~I~kGtFIcEY~GEVit~~ea~~r~~~~d~ylf~~~~~~~~~~~~dl  574 (665)
                      .+.||+. +++...|+|.++.  .+||||||+++|++|++|+||+||+++.+++.     ...|+|.....         
T Consensus        18 ~~~~~~~-~~lp~~l~l~~S~i~~~G~GVfA~~~I~kG~~~gey~Ge~i~~~e~~-----~~~Y~f~i~~~---------   82 (149)
T 2qpw_A           18 EVPEHVL-RGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQVK-----NNVYMWEVYYP---------   82 (149)
T ss_dssp             GSCHHHH-HTCCTTEEEEECSSCTTSEEEEESSCBCTTCEECCCCCEEECGGGCC-----CSSSEEEEEET---------
T ss_pred             hhhHHHH-hCCCCCeEEEEcCCCCCceEEEECCccCCCCEEEEEeCEEcCHHHhc-----cCceEEEEecC---------
Confidence            3556643 5678899999986  57999999999999999999999999877643     34566532110         


Q ss_pred             ccccccCCCCCCCCCCCCceEEeccc--cCCccccccCCCCC---CeeEEEEEEcCCCCcccEEEEEEccCCCCCCeEEE
Q 006009          575 SQVFSDYMRPSHPSIPPLDFAMDVSR--MRNVACYISHSPTP---NVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSI  649 (665)
Q Consensus       575 ~~~~~~~~~~~~~~~~~~~~~IDA~~--~GNvARFINHSC~P---N~~~q~V~~d~~d~~~prI~fFA~rdI~pGEELT~  649 (665)
                                     ....++|||+.  .||++|||||||+|   ||.+.  ..+      .+|.|||+|||+|||||||
T Consensus        83 ---------------~~~~~~IDa~~~~~gn~~RfINhSc~p~eqNl~~~--~~~------~~I~~~A~RdI~~GEEL~~  139 (149)
T 2qpw_A           83 ---------------NLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPL--EIN------RAIYYKTLKPIAPGEELLV  139 (149)
T ss_dssp             ---------------TTEEEEEECSSGGGSCGGGGCEECBTTBTCCEEEE--EET------TEEEEEESSCBCTTCBCEE
T ss_pred             ---------------CCeeEEEeCCCCCCCcceeeeeccCChhhcCEEEE--EEC------CEEEEEEccCCCCCCEEEE
Confidence                           01146899998  99999999999999   99863  222      4999999999999999999


Q ss_pred             ecCCCc
Q 006009          650 DYGVAD  655 (665)
Q Consensus       650 DYG~~~  655 (665)
                      ||+.+.
T Consensus       140 dY~~~~  145 (149)
T 2qpw_A          140 WYNGED  145 (149)
T ss_dssp             CCCCCC
T ss_pred             ccCCcc
Confidence            999874


No 18 
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=99.92  E-value=3.5e-26  Score=208.86  Aligned_cols=111  Identities=18%  Similarity=0.256  Sum_probs=91.8

Q ss_pred             CcccEEEEEcCCCCccceecccccCCceEEEeeceeecHHHHHHhhcCCCeecccCccccccCcCCCCccccccCCCCCC
Q 006009          507 LRNRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMNGDSLIYPNRFSARWGEWGDLSQVFSDYMRPSH  586 (665)
Q Consensus       507 ~k~~LeVfrT~~kGwGVrA~e~I~kGtFIcEY~GEVit~~ea~~r~~~~d~ylf~~~~~~~~~~~~dl~~~~~~~~~~~~  586 (665)
                      +..+++|++++.+||||||.++|++|++|+||.|++++.++++..   ...|+|..                        
T Consensus         2 ~~~~~~v~~s~~~G~GvfA~~~I~~G~~I~ey~g~vi~~~e~~~~---~~~y~f~~------------------------   54 (119)
T 1n3j_A            2 FNDRVIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGTA---LEDYLFSR------------------------   54 (119)
T ss_dssp             BCSSEEEECSCSSCCEEEECCCBCSCEEECCCCCEEECSHHHHHH---SCSEEEEE------------------------
T ss_pred             CCCCEEEEECCCceeEEEECCcCCCCCEEEEeeEEEECHHHHhhc---cCCeEEEe------------------------
Confidence            356899999999999999999999999999999999999887652   23455411                        


Q ss_pred             CCCCCCceEEeccccCCccccccCCCCCCeeEEEEEEcCCCCcccEEEEEEccCCCCCCeEEEecCCCccCC
Q 006009          587 PSIPPLDFAMDVSRMRNVACYISHSPTPNVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYGVADEWS  658 (665)
Q Consensus       587 ~~~~~~~~~IDA~~~GNvARFINHSC~PN~~~q~V~~d~~d~~~prI~fFA~rdI~pGEELT~DYG~~~~~~  658 (665)
                          + .   |+...||++|||||||+|||.+..+  .+    ..++.|||+|||++|||||+||+...+..
T Consensus        55 ----~-~---d~~~~~~~~~~~NHsc~pN~~~~~~--~~----~~~~~~~A~rdI~~GeElt~~Y~~~~~~~  112 (119)
T 1n3j_A           55 ----K-N---MSAMALGFGAIFNHSKDPNARHELT--AG----LKRMRIFTIKPIAIGEEITISYGDDYWLS  112 (119)
T ss_dssp             ----T-T---EEEEESSSHHHHHSCSSCCCEEEEC--SS----SSCEEEEECSCBCSSEEECCCCCCCCCCC
T ss_pred             ----C-C---ccccccCceeeeccCCCCCeeEEEE--CC----CeEEEEEEccccCCCCEEEEecCchhhcC
Confidence                0 1   7888999999999999999987652  22    36899999999999999999999985543


No 19 
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=99.88  E-value=7.8e-24  Score=218.76  Aligned_cols=119  Identities=18%  Similarity=0.185  Sum_probs=84.8

Q ss_pred             EEcCCCCccceecccccCCceEEEeeceeecHHHHHHhhcCCCeecccCccccccCcCCCCccccccCCCCCCCCCCCCc
Q 006009          514 FRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMNGDSLIYPNRFSARWGEWGDLSQVFSDYMRPSHPSIPPLD  593 (665)
Q Consensus       514 frT~~kGwGVrA~e~I~kGtFIcEY~GEVit~~ea~~r~~~~d~ylf~~~~~~~~~~~~dl~~~~~~~~~~~~~~~~~~~  593 (665)
                      |++..+||||||.++|++|+||+||+||++...+++.+.     |+....        .+..-..+             .
T Consensus       141 y~~e~~G~GlfA~~~I~kGe~I~EY~Geii~~~e~ee~~-----~~~~~~--------~dF~i~~s-------------~  194 (273)
T 3s8p_A          141 YSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEENM-----LLRHGE--------NDFSVMYS-------------T  194 (273)
T ss_dssp             CTTCSSEEEEEESSCBCTTCEEEEEEEEEEEECHHHHHH-----HCCTTT--------SCTTEEEE-------------T
T ss_pred             eeecCCCceEEECCccCCCCEEEEEEEEEccccHHHHHH-----Hhhhcc--------cccceecc-------------c
Confidence            345669999999999999999999999998765554321     111000        00000000             0


Q ss_pred             eEEeccccCCccccccCCCCCCeeEEEEEEcCCCCcccEEEEEEccCCCCCCeEEEecCCCcc-CCCccccCC
Q 006009          594 FAMDVSRMRNVACYISHSPTPNVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYGVADE-WSGKLAICN  665 (665)
Q Consensus       594 ~~IDA~~~GNvARFINHSC~PN~~~q~V~~d~~d~~~prI~fFA~rdI~pGEELT~DYG~~~~-~~~k~C~CG  665 (665)
                      ...+++.+||.||||||||+|||.+.  ..+.     .+|.|||+|||++|||||+||+...+ .....|.||
T Consensus       195 ~~~~a~~~g~~arfiNHSC~PN~~~~--~~~~-----~~i~i~A~RdI~~GEELt~~Y~~~~~~~~~f~C~C~  260 (273)
T 3s8p_A          195 RKNCAQLWLGPAAFINHDCRPNCKFV--STGR-----DTACVKALRDIEPGEEISCYYGDGFFGENNEFCECY  260 (273)
T ss_dssp             TTTEEEEEESGGGGCEECSSCSEEEE--EEET-----TEEEEEESSCBCTTCBCEECCCTTTTSGGGTTCCCH
T ss_pred             cccccceecchHHhhCCCCCCCeEEE--EcCC-----CEEEEEECceeCCCCEEEEecCchhcCCCCeEEECC
Confidence            01257889999999999999999763  3332     48999999999999999999998833 345689996


No 20 
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=99.85  E-value=5.1e-22  Score=202.99  Aligned_cols=115  Identities=17%  Similarity=0.140  Sum_probs=82.9

Q ss_pred             CCCCccceecccccCCceEEEeeceeecHHHHHHhhcCCCeecccCccccccCcCCCCccccccCCCCCCCCCCCCceEE
Q 006009          517 RETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMNGDSLIYPNRFSARWGEWGDLSQVFSDYMRPSHPSIPPLDFAM  596 (665)
Q Consensus       517 ~~kGwGVrA~e~I~kGtFIcEY~GEVit~~ea~~r~~~~d~ylf~~~~~~~~~~~~dl~~~~~~~~~~~~~~~~~~~~~I  596 (665)
                      ..+||||+|.++|++|+||+||+|+++...+++.+.......-|              +-..+             .-.+
T Consensus       116 ~~~G~Gv~A~~~I~kGE~I~ey~Geli~~t~~e~~~~~~~~n~f--------------~i~~~-------------~~~~  168 (247)
T 3rq4_A          116 ETNGAKIVSTRAWKKNEKLELLVGCIAELREADEGLLRAGENDF--------------SIMYS-------------TRKR  168 (247)
T ss_dssp             CSSCEEEEESSCBCTTCEEEEEEEEEEECCGGGGGGCCTTTSCT--------------TEEEE-------------TTTT
T ss_pred             cCCcceEEeCCccCCCCEEEEEEeEEEeCcHHHHHhhhccCCcE--------------EEEec-------------CCcc
Confidence            45899999999999999999999999865444432111000000              00000             0013


Q ss_pred             eccccCCccccccCCCCCCeeEEEEEEcCCCCcccEEEEEEccCCCCCCeEEEecCCC-ccCCCccccCC
Q 006009          597 DVSRMRNVACYISHSPTPNVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYGVA-DEWSGKLAICN  665 (665)
Q Consensus       597 DA~~~GNvARFINHSC~PN~~~q~V~~d~~d~~~prI~fFA~rdI~pGEELT~DYG~~-~~~~~k~C~CG  665 (665)
                      ++..+||++|||||||+||+.++.  +++     .+|.|+|+|||++|||||+||+.. +......|.|+
T Consensus       169 ~~~l~~~~ar~iNHSC~PN~~~~~--~~~-----~~i~v~A~rdI~~GEElt~~Y~~~~~~~~~f~C~C~  231 (247)
T 3rq4_A          169 SAQLWLGPAAFINHDCKPNCKFVP--ADG-----NAACVKVLRDIEPGDEVTCFYGEGFFGEKNEHCECH  231 (247)
T ss_dssp             EEEEEESGGGGCEECSSCSEEEEE--ETT-----TEEEEEESSCBCTTCBCEECCCTTSSSGGGTTCCCH
T ss_pred             cceeecchhhhcCCCCCCCEEEEE--eCC-----CEEEEEECCcCCCCCEEEEecCchhcCCCCCEEECC
Confidence            678899999999999999997543  333     399999999999999999999988 33455678885


No 21 
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=99.73  E-value=9.4e-18  Score=162.70  Aligned_cols=117  Identities=25%  Similarity=0.327  Sum_probs=81.5

Q ss_pred             cCCcccEEEEEcCC--CCccceecccccCCceEEEeeceeecHHHHHHhhcCCCeecccCccccccCcCCCCccccccCC
Q 006009          505 RGLRNRLEVFRSRE--TGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMNGDSLIYPNRFSARWGEWGDLSQVFSDYM  582 (665)
Q Consensus       505 ~G~k~~LeVfrT~~--kGwGVrA~e~I~kGtFIcEY~GEVit~~ea~~r~~~~d~ylf~~~~~~~~~~~~dl~~~~~~~~  582 (665)
                      ..+-..|+|.++..  +||||||+++|++|+++++|.|++++.+++....  +..|+|....                  
T Consensus        23 lsLP~~l~l~~S~i~~~G~GVfA~~~IpkGt~fGpY~Ge~i~~~ea~~~~--~~~y~w~i~~------------------   82 (170)
T 3ep0_A           23 LVLPAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDICK--NNNLMWEVFN------------------   82 (170)
T ss_dssp             SSCCTTEEEEECSSSSCSEEEEESSCBCTTCEEEEECCEEECC------------CEEEEEC------------------
T ss_pred             cCCCCCeEEEEcCCCCCceEEEECcccCCCCEEEecCceecCHHHhcccc--CCceEEEEec------------------
Confidence            34556889998754  6999999999999999999999999998765422  2345542110                  


Q ss_pred             CCCCCCCCCCceEEeccc--cCCccccccCCCC---CCeeEEEEEEcCCCCcccEEEEEEccCCCCCCeEEEecCCC
Q 006009          583 RPSHPSIPPLDFAMDVSR--MRNVACYISHSPT---PNVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYGVA  654 (665)
Q Consensus       583 ~~~~~~~~~~~~~IDA~~--~GNvARFINHSC~---PN~~~q~V~~d~~d~~~prI~fFA~rdI~pGEELT~DYG~~  654 (665)
                           ......++||++.  .||++|||||+|+   +||.+..  .+      .+|.|+|+|||.|||||+++||.+
T Consensus        83 -----~~G~~~~~IDa~~e~~~NWmR~Vn~A~~~~eqNl~a~q--~~------~~I~~~a~RdI~pGeELlvwYg~~  146 (170)
T 3ep0_A           83 -----EDGTVRYFIDASQEDHRSWMTYIKCARNEQEQNLEVVQ--IG------TSIFYKAIEMIPPDQELLVWYGNS  146 (170)
T ss_dssp             -----TTSSEEEEEECC------GGGGCEECSSTTTCCEEEEE--ET------TEEEEEESSCBCTTCBCEEEECC-
T ss_pred             -----CCCcEEEEEECCCCCCcceeeeEEecCCcccCCeeeEE--EC------CEEEEEECcCcCCCCEEEEeeCHH
Confidence                 0001247999998  8999999999996   8987543  23      389999999999999999999977


No 22 
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=99.71  E-value=9.4e-18  Score=159.79  Aligned_cols=118  Identities=16%  Similarity=0.175  Sum_probs=80.4

Q ss_pred             CCcccEEEEEc-CCCCccceecccccCCceEEEeeceeecHHHHHHhhcCCCeecccCccccccCcCCCCccccccCCCC
Q 006009          506 GLRNRLEVFRS-RETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMNGDSLIYPNRFSARWGEWGDLSQVFSDYMRP  584 (665)
Q Consensus       506 G~k~~LeVfrT-~~kGwGVrA~e~I~kGtFIcEY~GEVit~~ea~~r~~~~d~ylf~~~~~~~~~~~~dl~~~~~~~~~~  584 (665)
                      .+-..|+|..+ .+.|+||+|.+.|++|+++++|.|++++.+++..+...+..|++...               .+    
T Consensus        20 slP~~l~l~~S~~~~g~GVfa~~~Ip~G~~fGPy~Ge~~~~~e~~~~~~~~~~y~w~i~---------------~~----   80 (151)
T 3db5_A           20 SLPKQLVLRQSIVGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIY---------------HN----   80 (151)
T ss_dssp             TCCTTEEEEECC---CEEEEESSCBCTTCEECCCCCEEEC-----------CCSEEEEE---------------ET----
T ss_pred             cCCCCeEEEEccCCCceEEEEecccCCCCEEEEeccEEeCHHHhhcccccCCCceEEEE---------------eC----
Confidence            34456888775 35899999999999999999999999999887654222223443110               00    


Q ss_pred             CCCCCCCCceEEeccc--cCCccccccCCCCC---CeeEEEEEEcCCCCcccEEEEEEccCCCCCCeEEEecCCCc
Q 006009          585 SHPSIPPLDFAMDVSR--MRNVACYISHSPTP---NVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYGVAD  655 (665)
Q Consensus       585 ~~~~~~~~~~~IDA~~--~GNvARFINHSC~P---N~~~q~V~~d~~d~~~prI~fFA~rdI~pGEELT~DYG~~~  655 (665)
                           ....++||++.  .||++|||||||++   ||.+..  .+      .+|.|+|+|||+|||||+++||.+.
T Consensus        81 -----~~~~~~iD~~~~~~~NWmR~Vn~A~~~~eqNl~a~q--~~------~~I~~~a~rdI~pGeELlv~Yg~~y  143 (151)
T 3db5_A           81 -----GVLEFCIITTDENECNWMMFVRKARNREEQNLVAYP--HD------GKIFFCTSQDIPPENELLFYYSRDY  143 (151)
T ss_dssp             -----TEEEEEEECCCTTTSCGGGGCEECSSTTTCCEEEEE--ET------TEEEEEESSCBCTTCBCEEEECC--
T ss_pred             -----CCEEEEEECcCCCCCcceeEEEecCCcccCceEEEE--EC------CEEEEEEccccCCCCEEEEecCHHH
Confidence                 01246899997  59999999999964   987643  23      3899999999999999999999873


No 23 
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=99.65  E-value=1.1e-16  Score=158.44  Aligned_cols=114  Identities=18%  Similarity=0.168  Sum_probs=87.0

Q ss_pred             CcccEEEEEcCC--CCccceecccccCCceEEEeeceeecHHHHHHhhcCCCeecccCccccccCcCCCCccccccCCCC
Q 006009          507 LRNRLEVFRSRE--TGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMNGDSLIYPNRFSARWGEWGDLSQVFSDYMRP  584 (665)
Q Consensus       507 ~k~~LeVfrT~~--kGwGVrA~e~I~kGtFIcEY~GEVit~~ea~~r~~~~d~ylf~~~~~~~~~~~~dl~~~~~~~~~~  584 (665)
                      +-..|+|..+..  +|+||||.+.|++|+++++|.|++++.+++...  .+..|+|...               .+    
T Consensus        56 LP~~L~lr~S~i~~~G~GVfa~~~IpkGt~fGPY~Ge~~~~~e~~~~--~~~~y~w~i~---------------~~----  114 (196)
T 3dal_A           56 LPRNLLFKYATNSEEVIGVMSKEYIPKGTRFGPLIGEIYTNDTVPKN--ANRKYFWRIY---------------SR----  114 (196)
T ss_dssp             CCTTEEEEECTTSCCEEEEEESSCBCTTEEECCCCCEEECTTTCC-----CCTTEEEEE---------------ET----
T ss_pred             CCCCeEEEECCCCCceeEEEEccccCCCCEEEeccceEcCHHHhhhc--cCCcceeeec---------------cC----
Confidence            445788887754  899999999999999999999999998765422  1223444210               00    


Q ss_pred             CCCCCCCCceEEeccc--cCCccccccCCCC---CCeeEEEEEEcCCCCcccEEEEEEccCCCCCCeEEEecCCC
Q 006009          585 SHPSIPPLDFAMDVSR--MRNVACYISHSPT---PNVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYGVA  654 (665)
Q Consensus       585 ~~~~~~~~~~~IDA~~--~GNvARFINHSC~---PN~~~q~V~~d~~d~~~prI~fFA~rdI~pGEELT~DYG~~  654 (665)
                           ....++||++.  .||++|||||+|+   +||.+..  .+      .+|.|+|+|||.|||||+++||.+
T Consensus       115 -----g~~~~~IDas~e~~gNWmRfVn~A~~~~eqNl~a~q--~~------~~I~y~a~RdI~pGeELlvwYg~~  176 (196)
T 3dal_A          115 -----GELHHFIDGFNEEKSNWMRYVNPAHSPREQNLAACQ--NG------MNIYFYTIKPIPANQELLVWYCRD  176 (196)
T ss_dssp             -----TEEEEEEECCCTTSSCGGGGCEECSSTTTCCEEEEE--ET------TEEEEEESSCBCTTCBCEEEECHH
T ss_pred             -----CCEEEEEECCCCCCCceEEeEEecCCcccCCcEEEE--EC------CEEEEEECcccCCCCEEEEecCHH
Confidence                 01247999987  8999999999996   7987532  23      489999999999999999999976


No 24 
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=99.48  E-value=3.7e-14  Score=143.46  Aligned_cols=110  Identities=18%  Similarity=0.191  Sum_probs=83.6

Q ss_pred             CcccEEEEEcCCCCccceec-ccccCCceEEEeeceeecHHHHHHhhcCCCeecccCccccccCcCCCCccccccCCCCC
Q 006009          507 LRNRLEVFRSRETGWGVRSL-DLIHAGAFICEYAGVVLTMEQAQIFSMNGDSLIYPNRFSARWGEWGDLSQVFSDYMRPS  585 (665)
Q Consensus       507 ~k~~LeVfrT~~kGwGVrA~-e~I~kGtFIcEY~GEVit~~ea~~r~~~~d~ylf~~~~~~~~~~~~dl~~~~~~~~~~~  585 (665)
                      +-..|+|.++...|+||+++ +.|++|+.+++|.|++++.++++      ..|++....        .            
T Consensus        70 LP~~L~vr~S~i~~~Gv~~~~~~IpkGt~fGPY~Ge~~s~~ea~------~~y~wei~~--------~------------  123 (237)
T 3ray_A           70 IPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSA------GFFSWLIVD--------K------------  123 (237)
T ss_dssp             CCTTEEEEECTTSCEEEEECSSCBCTTEEECCCCSEEECC-----------CCEEEEEC--------T------------
T ss_pred             CCCCeEEEEcCCCCcceEEEeCcCCCCCEEEecccEEcChHHcc------ccceEEEEc--------C------------
Confidence            34468999999999999987 89999999999999999876542      123331100        0            


Q ss_pred             CCCCCCCceEEeccc--cCCccccccCCCC---CCeeEEEEEEcCCCCcccEEEEEEccCCCCCCeEEEecCCC
Q 006009          586 HPSIPPLDFAMDVSR--MRNVACYISHSPT---PNVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYGVA  654 (665)
Q Consensus       586 ~~~~~~~~~~IDA~~--~GNvARFINHSC~---PN~~~q~V~~d~~d~~~prI~fFA~rdI~pGEELT~DYG~~  654 (665)
                          ....++||++.  .||++|||||+|.   +||.+.  ..+      -+|.|+|+|||.|||||.++|+.+
T Consensus       124 ----~g~~~~IDgsde~~gNWmRfVn~Ar~~~EqNL~A~--q~~------~~Iyy~a~RdI~pGeELlVwYg~~  185 (237)
T 3ray_A          124 ----NNRYKSIDGSDETKANWMRYVVISREEREQNLLAF--QHS------ERIYFRACRDIRPGEWLRVWYSED  185 (237)
T ss_dssp             ----TSCEEEEECCCTTTSCGGGGCEECCCTTTCCEEEE--EET------TEEEEEESSCBCTTCBCEEEECHH
T ss_pred             ----CCcEEEEecCCCCCCcceeEEEcCCCcccccceeE--EeC------CEEEEEEccccCCCCEEEEeeCHH
Confidence                01246899997  7999999999996   688653  233      389999999999999999999966


No 25 
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=99.42  E-value=1.4e-13  Score=131.17  Aligned_cols=113  Identities=15%  Similarity=0.139  Sum_probs=77.6

Q ss_pred             cEEEEEcCCCCccceecccccCCceEEEeeceeecHHHHHHhhcCCCeecccCccccccCcCCCCccccccCCCCCCCCC
Q 006009          510 RLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTMEQAQIFSMNGDSLIYPNRFSARWGEWGDLSQVFSDYMRPSHPSI  589 (665)
Q Consensus       510 ~LeVfrT~~kGwGVrA~e~I~kGtFIcEY~GEVit~~ea~~r~~~~d~ylf~~~~~~~~~~~~dl~~~~~~~~~~~~~~~  589 (665)
                      .|+|-   ..|+||||++.|++|+.+++|.|++++.+++..     ..|.+.....       +...  .+       ..
T Consensus        24 ~L~i~---~~g~GVfA~~~IpkGt~fGPy~Ge~~~~~e~~~-----~~~~~~v~~~-------d~~~--~~-------~~   79 (152)
T 3ihx_A           24 VLYID---RFLGGVFSKRRIPKRTQFGPVEGPLVRGSELKD-----CYIHLKVSLD-------KGDR--KE-------RD   79 (152)
T ss_dssp             TEEEC---TTTCSEEESSCBCSSCEECCCCSCEECSTTCCS-----SSCCCBC---------------------------
T ss_pred             ceEEe---ecCCeEEECceecCCCEEEeeccEEcCHHHhcc-----CcceEEEEcc-------cccc--cc-------cc
Confidence            56653   358999999999999999999999999876421     1121110000       0000  00       00


Q ss_pred             CCCceEEeccc--cCCccccccCCCC---CCeeEEEEEEcCCCCcccEEEEEEccCCCCCCeEEEecCCC
Q 006009          590 PPLDFAMDVSR--MRNVACYISHSPT---PNVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYGVA  654 (665)
Q Consensus       590 ~~~~~~IDA~~--~GNvARFINHSC~---PN~~~q~V~~d~~d~~~prI~fFA~rdI~pGEELT~DYG~~  654 (665)
                      ....++||++.  .||+.|||||+|+   +||.+.  ..+      -+|.|.|+|||.|||||.++|+.+
T Consensus        80 ~~~~~~iD~~~~~~~NWmr~vn~a~~~~eqNl~a~--q~~------~~I~~~~~r~I~pGeELlv~Y~~~  141 (152)
T 3ihx_A           80 LHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAY--QYG------HHVYYTTIKNVEPKQELKVWYAAS  141 (152)
T ss_dssp             ----CEECCCCTTTSCGGGGCCBCCSTTTCCEEEE--ECS------SSEEEEESSCBCTTCBCCEEECHH
T ss_pred             CCccEEEEccCCCCCcceeeeeccCCccCCCcEEE--EeC------CeEEEEEeeecCCCCEEEEechHH
Confidence            12357999987  6999999999997   788753  223      278899999999999999999866


No 26 
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.45  E-value=9.1e-08  Score=106.60  Aligned_cols=50  Identities=26%  Similarity=0.210  Sum_probs=36.0

Q ss_pred             cccccCCCCCCeeEEEEEEcCCC--C---cccEEEEEEccCCCCCCeEEEecCCC
Q 006009          605 ACYISHSPTPNVMVQFVLYDHNN--L---MFPHLMLFALENIPPLRELSIDYGVA  654 (665)
Q Consensus       605 ARFINHSC~PN~~~q~V~~d~~d--~---~~prI~fFA~rdI~pGEELT~DYG~~  654 (665)
                      +.||||||.||+.+...-.++..  .   ...++.|+|+|||++|||||++|+..
T Consensus       201 ~s~~NHSC~PN~~~~~~~~~~~~~~~~~~~~~~~~v~A~rdI~~GEEltisY~~~  255 (490)
T 3n71_A          201 LGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDF  255 (490)
T ss_dssp             GGGCEECSSCSEEEEEECCCCSSSCCCGGGSCEEEEEESSCBCTTCBCEECSSCS
T ss_pred             hhhcccCCCCCeeEEecCCccccccccccccceEEEEECCCCCCCCEEEEeecCC
Confidence            44679999999985432111100  0   11389999999999999999999865


No 27 
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.44  E-value=1.4e-07  Score=103.32  Aligned_cols=43  Identities=35%  Similarity=0.481  Sum_probs=36.3

Q ss_pred             ccccccCCCCCCeeEEEEEEcCCCCcccEEEEEEccCCCCCCeEEEecCCC
Q 006009          604 VACYISHSPTPNVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYGVA  654 (665)
Q Consensus       604 vARFINHSC~PN~~~q~V~~d~~d~~~prI~fFA~rdI~pGEELT~DYG~~  654 (665)
                      .+.||||||.||+.+..   ++     .++.|+|+|||++|||||++|+..
T Consensus       201 ~~s~~NHsC~PN~~~~~---~~-----~~~~~~a~r~I~~GeEl~isY~~~  243 (429)
T 3qwp_A          201 SISLLNHSCDPNCSIVF---NG-----PHLLLRAVRDIEVGEELTICYLDM  243 (429)
T ss_dssp             TGGGCEECSSCSEEEEE---ET-----TEEEEEECSCBCTTCEEEECCSCS
T ss_pred             hhHhhCcCCCCCeEEEE---eC-----CEEEEEEeeeECCCCEEEEEecCC
Confidence            56789999999997642   23     378999999999999999999865


No 28 
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.32  E-value=3.4e-07  Score=100.46  Aligned_cols=42  Identities=26%  Similarity=0.290  Sum_probs=34.8

Q ss_pred             cccccCCCCCCeeEEEEEEcCCCCcccEEEEEEccCCCCCCeEEEecCCC
Q 006009          605 ACYISHSPTPNVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYGVA  654 (665)
Q Consensus       605 ARFINHSC~PN~~~q~V~~d~~d~~~prI~fFA~rdI~pGEELT~DYG~~  654 (665)
                      +.||||||.||+.+.  + ++     .++.|+|+|||++|||||++|+..
T Consensus       202 ~s~~NHsC~PN~~~~--~-~~-----~~~~~~a~r~I~~Geel~i~Y~~~  243 (433)
T 3qww_A          202 VALMNHSCCPNVIVT--Y-KG-----TLAEVRAVQEIHPGDEVFTSYIDL  243 (433)
T ss_dssp             GGGSEECSSCSEEEE--E-ET-----TEEEEEESSCBCTTCEEEECCSCT
T ss_pred             ccccCCCCCCCceEE--E-cC-----CEEEEEeccCcCCCCEEEEeecCC
Confidence            447899999999753  3 33     278899999999999999999876


No 29 
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=96.29  E-value=0.0028  Score=69.70  Aligned_cols=43  Identities=28%  Similarity=0.342  Sum_probs=34.9

Q ss_pred             ccccccCCCCCCeeEEEEEEcCCCCcccEEEEEEccCCCCCCeEEEecCCC
Q 006009          604 VACYISHSPTPNVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYGVA  654 (665)
Q Consensus       604 vARFINHSC~PN~~~q~V~~d~~d~~~prI~fFA~rdI~pGEELT~DYG~~  654 (665)
                      ++=++||||.||+.+   .++..     .+.+.|.++|++||||+++||..
T Consensus       222 ~~D~~NH~~~~~~~~---~~~~~-----~~~~~a~~~i~~Geei~~~YG~~  264 (449)
T 3qxy_A          222 AADILNHLANHNANL---EYSAN-----CLRMVATQPIPKGHEIFNTYGQM  264 (449)
T ss_dssp             TGGGCEECSSCSEEE---EECSS-----EEEEEESSCBCTTCEEEECCSSC
T ss_pred             cHHHhcCCCCCCeEE---EEeCC-----eEEEEECCCcCCCchhhccCCCC
Confidence            344799999999864   34432     68899999999999999999963


No 30 
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=94.88  E-value=0.011  Score=64.58  Aligned_cols=51  Identities=14%  Similarity=-0.036  Sum_probs=33.2

Q ss_pred             ccccccCCCCCCeeEEEEEEcC---CCCcccEEEEEEccCCCCCCeEEEecCCC
Q 006009          604 VACYISHSPTPNVMVQFVLYDH---NNLMFPHLMLFALENIPPLRELSIDYGVA  654 (665)
Q Consensus       604 vARFINHSC~PN~~~q~V~~d~---~d~~~prI~fFA~rdI~pGEELT~DYG~~  654 (665)
                      ++=++||||.||.....+-+++   ....-..+.+.|.++|++||||+++||..
T Consensus       189 ~~D~~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~i~~Geei~~sYG~~  242 (440)
T 2h21_A          189 MADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYIQYDLN  242 (440)
T ss_dssp             STTSCEECTTCCCCCCEEEC----------CEEEEEESSCBCTTSBCEECSCTT
T ss_pred             chHhhcCCCCcccccceeeecCcccccCCCceEEEEECCCCCCCCEEEEeCCCC
Confidence            3346899999975222222221   00012478899999999999999999964


No 31 
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=94.71  E-value=0.018  Score=64.22  Aligned_cols=41  Identities=15%  Similarity=0.090  Sum_probs=31.1

Q ss_pred             cccCCCCCCeeEEEEEEcCCCCcccEEEEEEccCCCCCCeEEEecCCC
Q 006009          607 YISHSPTPNVMVQFVLYDHNNLMFPHLMLFALENIPPLRELSIDYGVA  654 (665)
Q Consensus       607 FINHSC~PN~~~q~V~~d~~d~~~prI~fFA~rdI~pGEELT~DYG~~  654 (665)
                      ++||||.||..  .+..+.     -.+.+.|.++|++||||+++||.-
T Consensus       275 m~NH~~~~~~~--~~~~~~-----~~~~~~a~~~i~~Geei~isYG~~  315 (497)
T 3smt_A          275 MCNHTNGLITT--GYNLED-----DRCECVALQDFRAGEQIYIFYGTR  315 (497)
T ss_dssp             GCEECSCSEEE--EEETTT-----TEEEEEESSCBCTTCEEEECCCSC
T ss_pred             hhcCCCcccce--eeeccC-----CeEEEEeCCccCCCCEEEEeCCCC
Confidence            78999999642  122222     267789999999999999999863


No 32 
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=56.26  E-value=6.6  Score=42.60  Aligned_cols=30  Identities=33%  Similarity=0.539  Sum_probs=27.6

Q ss_pred             ccEEEEEcCCCCccceecccccCCceEEEe
Q 006009          509 NRLEVFRSRETGWGVRSLDLIHAGAFICEY  538 (665)
Q Consensus       509 ~~LeVfrT~~kGwGVrA~e~I~kGtFIcEY  538 (665)
                      ..++++.++.+|.||+|..+|++|+.|.+-
T Consensus         7 ~~ve~~~~~~~GRgl~A~r~i~~Ge~Il~e   36 (433)
T 3qww_A            7 GGLERFCSAGKGRGLRALRPFHVGDLLFSC   36 (433)
T ss_dssp             TTEEEEECTTSCEEEEESSCBCTTCEEEEE
T ss_pred             CcEEEeecCCCcCeEEECCCCCCCCEEEec
Confidence            478999999999999999999999998755


No 33 
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=52.01  E-value=9.2  Score=41.25  Aligned_cols=32  Identities=19%  Similarity=0.415  Sum_probs=28.3

Q ss_pred             cccEEEEEcCCCCccceecccccCCceEEEee
Q 006009          508 RNRLEVFRSRETGWGVRSLDLIHAGAFICEYA  539 (665)
Q Consensus       508 k~~LeVfrT~~kGwGVrA~e~I~kGtFIcEY~  539 (665)
                      ...+++|.++.+|.||+|.++|++|+.|..-.
T Consensus         4 ~~~i~~~~~~~~GR~l~Atr~i~~Ge~Il~e~   35 (429)
T 3qwp_A            4 PLKVEKFATANRGNGLRAVTPLRPGELLFRSD   35 (429)
T ss_dssp             CCSEEEEECSSSSEEEEESSCBCTTCEEEEEC
T ss_pred             ccceeecccCCCCCeEEeCCCCCCCCEEEecC
Confidence            45788999999999999999999999998643


No 34 
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=49.23  E-value=10  Score=41.86  Aligned_cols=34  Identities=24%  Similarity=0.323  Sum_probs=29.6

Q ss_pred             cccEEEEEcCCCCccceecccccCCceEEEeece
Q 006009          508 RNRLEVFRSRETGWGVRSLDLIHAGAFICEYAGV  541 (665)
Q Consensus       508 k~~LeVfrT~~kGwGVrA~e~I~kGtFIcEY~GE  541 (665)
                      -..++|+.++.+|.||+|..+|++|+.|..-.-.
T Consensus         6 ~~~v~v~~~~~~GR~lvAtr~i~~Ge~Il~e~P~   39 (490)
T 3n71_A            6 MENVEVFTSEGKGRGLKATKEFWAADVIFAERAY   39 (490)
T ss_dssp             CTTEEEEECSSSCEEEEESSCBCTTCEEEEECCS
T ss_pred             CCceEEEecCCCCceEEeccCCCCCCEEEecCCc
Confidence            3579999999999999999999999999865543


No 35 
>1rju_V Metallothionein; Cu(I)-thiolate, metal binding protein; 1.44A {Synthetic} SCOP: g.46.1.1 PDB: 1aoo_A 1aqq_A 1aqr_A 1fmy_A
Probab=29.74  E-value=24  Score=24.51  Aligned_cols=15  Identities=40%  Similarity=1.424  Sum_probs=8.9

Q ss_pred             CCCCCCCCCCC--CCcc
Q 006009          448 AGCDCVSGCTD--RCFC  462 (665)
Q Consensus       448 ~gC~C~~~C~~--~C~C  462 (665)
                      ..|.|..+|.+  .|+|
T Consensus        18 kscscptgcnsddkcpc   34 (36)
T 1rju_V           18 KSCSCPTGCNSDDKCPC   34 (36)
T ss_dssp             TSCCSCTTCCCGGGCCT
T ss_pred             hcCCCCCCCCCCCcCCC
Confidence            35666666653  4666


No 36 
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=29.32  E-value=28  Score=38.46  Aligned_cols=32  Identities=22%  Similarity=0.301  Sum_probs=26.9

Q ss_pred             cEEEEEcCCCCccceecccccCCceEEEeece
Q 006009          510 RLEVFRSRETGWGVRSLDLIHAGAFICEYAGV  541 (665)
Q Consensus       510 ~LeVfrT~~kGwGVrA~e~I~kGtFIcEY~GE  541 (665)
                      .+++...+..|+||+|.++|++|+.|..---.
T Consensus        94 ~v~i~~~~~~GrGl~A~~dI~~ge~ll~IP~~  125 (497)
T 3smt_A           94 GFEMVNFKEEGFGLRATRDIKAEELFLWVPRK  125 (497)
T ss_dssp             TEEEEEETTTEEEEEESSCBCTTCEEEEEEGG
T ss_pred             ceEEEEcCCCccEEEEcccCCCCCEEEEcCHH
Confidence            57777778899999999999999998876443


No 37 
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.66  E-value=25  Score=29.22  Aligned_cols=17  Identities=29%  Similarity=0.319  Sum_probs=14.2

Q ss_pred             EEEEccCCCCCCeEEEe
Q 006009          634 MLFALENIPPLRELSID  650 (665)
Q Consensus       634 ~fFA~rdI~pGEELT~D  650 (665)
                      .++|.+||++||.||-+
T Consensus         8 slvA~rdI~~Gevit~~   24 (79)
T 1wvo_A            8 SVVAKVKIPEGTILTMD   24 (79)
T ss_dssp             EEEESSCBCTTCBCCGG
T ss_pred             EEEEeCccCCCCCcCHH
Confidence            57899999999998854


No 38 
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=22.48  E-value=48  Score=35.98  Aligned_cols=33  Identities=18%  Similarity=0.392  Sum_probs=26.4

Q ss_pred             cEEEEEc-CCCCccceecccccCCceEEEeecee
Q 006009          510 RLEVFRS-RETGWGVRSLDLIHAGAFICEYAGVV  542 (665)
Q Consensus       510 ~LeVfrT-~~kGwGVrA~e~I~kGtFIcEY~GEV  542 (665)
                      +++|... ...|+||+|.++|++|+.|..---.+
T Consensus        39 ~v~i~~~~~~~G~Gv~A~~dI~~ge~ll~IP~~~   72 (449)
T 3qxy_A           39 KVAVSRQGTVAGYGMVARESVQAGELLFVVPRAA   72 (449)
T ss_dssp             TEEEESSSCSSSSEEEESSCBCTTCEEEEEEGGG
T ss_pred             ceEEEecCCCceEEEEECCCCCCCCEEEEeCcHH
Confidence            5777764 46899999999999999988765444


No 39 
>1aqs_A Cu-MT, Cu-metallothionein; copper detoxification, metal-thiolate cluster; NMR {Saccharomyces cerevisiae} SCOP: g.46.1.1
Probab=22.45  E-value=45  Score=24.94  Aligned_cols=20  Identities=40%  Similarity=1.162  Sum_probs=12.0

Q ss_pred             CCCCCCCCCCC--CCCcccccc
Q 006009          447 GAGCDCVSGCT--DRCFCAVKN  466 (665)
Q Consensus       447 ~~gC~C~~~C~--~~C~C~~~n  466 (665)
                      ...|.|..+|.  +.|+|..++
T Consensus        21 qkscscptgcnsddkcpcgnks   42 (53)
T 1aqs_A           21 QKSCSCPTGCNSDDKCPCGNKS   42 (53)
T ss_dssp             TTSCSCCTTCSSSSSCCCCC--
T ss_pred             hhcCCCCCCCCCCCcCCCCCcc
Confidence            44677777776  357776543


Done!